Jatropha Genome Database

JcCB0492761.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0492761.20 - phase: 0 /partial
         (55 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04870.2 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE DESATURA...    67   2e-12
AT3G04870.1 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE DESATURA...    67   2e-12

>AT3G04870.2 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE
           DESATURASE); carotene 7,8-desaturase |
           chr3:1342842-1346189 FORWARD
          Length = 558

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/55 (65%), Positives = 42/55 (76%), Gaps = 7/55 (12%)

Query: 1   DYIDSMEGATLSGRQASAYICDAGEDLVALRKKLAAIESPEIGPSSPVTDELSLV 55
           DYIDSMEGATLSGRQAS+YICDAGE+L  L KKL++        ++ V DELSLV
Sbjct: 511 DYIDSMEGATLSGRQASSYICDAGEELAELNKKLSS-------SATAVPDELSLV 558


>AT3G04870.1 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE
           DESATURASE); carotene 7,8-desaturase |
           chr3:1342842-1346189 FORWARD
          Length = 558

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/55 (65%), Positives = 42/55 (76%), Gaps = 7/55 (12%)

Query: 1   DYIDSMEGATLSGRQASAYICDAGEDLVALRKKLAAIESPEIGPSSPVTDELSLV 55
           DYIDSMEGATLSGRQAS+YICDAGE+L  L KKL++        ++ V DELSLV
Sbjct: 511 DYIDSMEGATLSGRQASSYICDAGEELAELNKKLSS-------SATAVPDELSLV 558