Jatropha Genome Database

JcCB0487491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0487491.10 + phase: 0 
         (202 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02570.1 | Symbols: MEE31, PMI1 | MEE31 (MATERNAL EFFECT EMBR...   195   1e-50
AT1G67070.1 | Symbols: DIN9, PMI2 | DIN9 (DARK INDUCIBLE 9); man...   179   1e-45

>AT3G02570.1 | Symbols: MEE31, PMI1 | MEE31 (MATERNAL EFFECT EMBRYO
           ARREST 31); mannose-6-phosphate isomerase |
           chr3:543463-545478 REVERSE
          Length = 432

 Score =  195 bits (496), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 90/145 (62%), Positives = 115/145 (79%), Gaps = 3/145 (2%)

Query: 42  CSVQNYDWGIIGNNSQVARLFALNSGSDICPNKPYAEFWIGTHESGPSFLDHGNAGFRSS 101
           CSV++YDWG IG++S V R++A NS  +I P +PYAE W+GTHESGPS+L+  +    + 
Sbjct: 25  CSVKDYDWGKIGSDSLVYRVYAANSDYEIDPTRPYAELWMGTHESGPSYLEDADGS--NG 82

Query: 102 LSLKSWILDNPILVLGDRVFEKWGGDLPFLLKVLSVEKALSIQAHPDKELARALHISQPN 161
           ++L+SWI +NP   LG+RV EKWG DLPFL KVLSV + LSIQAHPDK+LA+ +H + PN
Sbjct: 83  VTLRSWITENPK-SLGNRVLEKWGCDLPFLFKVLSVARPLSIQAHPDKKLAKKMHKAHPN 141

Query: 162 VYKDGNHKPEMALALTEFEALCGFI 186
           +YKD NHKPEMALA T+FEALCGFI
Sbjct: 142 LYKDDNHKPEMALAYTQFEALCGFI 166


>AT1G67070.1 | Symbols: DIN9, PMI2 | DIN9 (DARK INDUCIBLE 9);
           mannose-6-phosphate isomerase | chr1:25042324-25044412
           FORWARD
          Length = 441

 Score =  179 bits (453), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/155 (56%), Positives = 112/155 (72%), Gaps = 4/155 (2%)

Query: 42  CSVQNYDWGIIGNNSQVARLFALNSGSDICPNKPYAEFWIGTHESGPSFLDHGNAGFRSS 101
           C V+NY+WG +G  S VARL   N+G  +    PYAEFW+GTHESGPS ++ G+    S 
Sbjct: 27  CFVKNYEWGKLGPESLVARLQEANTGQRVDSEIPYAEFWMGTHESGPSHVEFGSGHGVSD 86

Query: 102 ---LSLKSWILDNPILVLGDRVFEKWGGDLPFLLKVLSVEKALSIQAHPDKELARALHIS 158
              ++LKSW+LDNP L LG +V +KWG DLPFL KVLSV KALSIQAHP+K LA  LH  
Sbjct: 87  KCMVTLKSWVLDNPNL-LGSKVVDKWGCDLPFLFKVLSVTKALSIQAHPNKALAEKLHRE 145

Query: 159 QPNVYKDGNHKPEMALALTEFEALCGFISTKVIMQ 193
            P +Y+D NHKPE+ALA+T F+ALCGF++ K + +
Sbjct: 146 DPLLYRDNNHKPEIALAVTPFQALCGFVTLKELKE 180