Jatropha Genome Database

JcCB0480731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0480731.10 - phase: 0 /partial
         (100 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08660.1 | Symbols:  | glycosyl transferase family 29 protein...   194   1e-50
AT1G08660.2 | Symbols:  | glycosyl transferase family 29 protein...   194   1e-50
AT3G48820.2 | Symbols:  | glycosyl transferase family 29 protein...   105   6e-24
AT3G48820.1 | Symbols:  | glycosyl transferase family 29 protein...   105   7e-24

>AT1G08660.1 | Symbols:  | glycosyl transferase family 29 protein /
           sialyltransferase family protein | chr1:2757116-2759677
           REVERSE
          Length = 474

 Score =  194 bits (493), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 92/100 (92%), Positives = 96/100 (96%)

Query: 1   KYAKHVGLKRDFRLVVRGAARNMVTILNGSTDEVLIIKSVTHRDFNAMIKSIPNPVYLFQ 60
           KYAK+VG+KRDFRLVVRGAARNM+ ILNGS +EVLIIKSVTHRDFN MIK IPNPVYLFQ
Sbjct: 216 KYAKYVGVKRDFRLVVRGAARNMIKILNGSDNEVLIIKSVTHRDFNEMIKRIPNPVYLFQ 275

Query: 61  GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 100
           GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW
Sbjct: 276 GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 315


>AT1G08660.2 | Symbols:  | glycosyl transferase family 29 protein /
           sialyltransferase family protein | chr1:2757584-2759677
           REVERSE
          Length = 347

 Score =  194 bits (492), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 92/100 (92%), Positives = 96/100 (96%)

Query: 1   KYAKHVGLKRDFRLVVRGAARNMVTILNGSTDEVLIIKSVTHRDFNAMIKSIPNPVYLFQ 60
           KYAK+VG+KRDFRLVVRGAARNM+ ILNGS +EVLIIKSVTHRDFN MIK IPNPVYLFQ
Sbjct: 216 KYAKYVGVKRDFRLVVRGAARNMIKILNGSDNEVLIIKSVTHRDFNEMIKRIPNPVYLFQ 275

Query: 61  GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 100
           GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW
Sbjct: 276 GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 315


>AT3G48820.2 | Symbols:  | glycosyl transferase family 29 protein /
           sialyltransferase family protein |
           chr3:18100106-18102852 REVERSE
          Length = 431

 Score =  105 bits (262), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 4/103 (3%)

Query: 2   YAKHVGLKRDFRLVVRGAARNM--VTILNGSTDEVLIIKSVTHRDFNAMIKSIP--NPVY 57
           Y ++VG K  FRL+ RG+A+ +  V  L+    EVL++K+  H   N MI+ +P  NPVY
Sbjct: 201 YKEYVGEKSTFRLLNRGSAKALDKVVELDEKKQEVLLVKTTIHDIMNKMIREVPIKNPVY 260

Query: 58  LFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 100
           L  G      AKGTG+K++E ALS CD VD+YGFTVDPGY EW
Sbjct: 261 LMLGASFGSAAKGTGLKALEFALSTCDSVDMYGFTVDPGYKEW 303


>AT3G48820.1 | Symbols:  | glycosyl transferase family 29 protein /
           sialyltransferase family protein |
           chr3:18100106-18102852 REVERSE
          Length = 440

 Score =  105 bits (261), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 4/103 (3%)

Query: 2   YAKHVGLKRDFRLVVRGAARNM--VTILNGSTDEVLIIKSVTHRDFNAMIKSIP--NPVY 57
           Y ++VG K  FRL+ RG+A+ +  V  L+    EVL++K+  H   N MI+ +P  NPVY
Sbjct: 210 YKEYVGEKSTFRLLNRGSAKALDKVVELDEKKQEVLLVKTTIHDIMNKMIREVPIKNPVY 269

Query: 58  LFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 100
           L  G      AKGTG+K++E ALS CD VD+YGFTVDPGY EW
Sbjct: 270 LMLGASFGSAAKGTGLKALEFALSTCDSVDMYGFTVDPGYKEW 312