Jatropha Genome Database

JcCB0476701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0476701.10 + phase: 0 /partial
         (159 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G30841.1 | Symbols:  | 2,3-biphosphoglycerate-independent pho...   226   3e-60
AT4G09520.1 | Symbols:  | catalytic/ metal ion binding / phospho...   218   1e-57

>AT3G30841.1 | Symbols:  | 2,3-biphosphoglycerate-independent
           phosphoglycerate mutase-related /
           phosphoglyceromutase-related | chr3:12591595-12593401
           FORWARD
          Length = 495

 Score =  226 bits (577), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 113/161 (70%), Positives = 133/161 (82%), Gaps = 4/161 (2%)

Query: 1   AIDDAGHDKASVFKVKGLEAVDQAIGQLAKLLWQAESTGKFQYFLCVTGDHSTPVEYGDH 60
           AIDDAGHDKA++FKV+GLEAVD+AI QLAKLLWQAES+  +QYFLCVTGDHSTPVEYGDH
Sbjct: 337 AIDDAGHDKATMFKVRGLEAVDKAIRQLAKLLWQAESSTHYQYFLCVTGDHSTPVEYGDH 396

Query: 61  SFEPVPFAMSPLQDFVAAVGGESIVMATSLESFPLPT-VKAGEDLKDTKTEKERASKQLK 119
           SFEPVPF M  L+DFV+AVGGES V+ TSL+ FPLPT V++GED+  TK E+E   ++  
Sbjct: 397 SFEPVPFTMCRLRDFVSAVGGESAVLETSLDPFPLPTVVESGEDV--TKQEEESGRREAP 454

Query: 120 -AFSGDSVCEFSEIAAARGCLGRFPGGEMMGVIKAFLSLKT 159
            A  GD V E +E+AAARGCLGRF GGEMMGVI  FL+L+ 
Sbjct: 455 LAIGGDLVAELNEVAAARGCLGRFHGGEMMGVITNFLNLEV 495


>AT4G09520.1 | Symbols:  | catalytic/ metal ion binding /
           phosphoglycerate mutase | chr4:6024970-6026751 REVERSE
          Length = 492

 Score =  218 bits (555), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 109/158 (68%), Positives = 125/158 (79%), Gaps = 1/158 (0%)

Query: 1   AIDDAGHDKASVFKVKGLEAVDQAIGQLAKLLWQAESTGKFQYFLCVTGDHSTPVEYGDH 60
           AIDDAGHDKA++FKV+GLEAVD+AI QLAKLLWQAES+  +QYFLCVTGDHSTPVEYGDH
Sbjct: 333 AIDDAGHDKATLFKVRGLEAVDKAIRQLAKLLWQAESSSNYQYFLCVTGDHSTPVEYGDH 392

Query: 61  SFEPVPFAMSPLQDFVAAVGGESIVMATSLESFPLPTVKAGEDLKDTKTEKERASKQLK- 119
           SFEPVPF M  L+DFV AVGGES ++ TSL+ FPLPT  A  +    K E++   ++   
Sbjct: 393 SFEPVPFTMCRLKDFVRAVGGESALLETSLDPFPLPTDIASSENVIGKEEEDCGRREASL 452

Query: 120 AFSGDSVCEFSEIAAARGCLGRFPGGEMMGVIKAFLSL 157
           A SGDSV E +EIAAAR CLGRF GGEMMGVI  FL L
Sbjct: 453 AISGDSVSELNEIAAARRCLGRFHGGEMMGVITKFLKL 490