Jatropha Genome Database

JcCB0474591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0474591.10 - phase: 0 /partial
         (89 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55090.1 | Symbols:  | carbon-nitrogen hydrolase family prote...   157   1e-39

>AT1G55090.1 | Symbols:  | carbon-nitrogen hydrolase family protein
           | chr1:20554857-20558188 FORWARD
          Length = 725

 Score =  157 bits (397), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 70/76 (92%), Positives = 75/76 (98%)

Query: 13  QLDEVDMGMTYEELSVYGRLRKIFRCGPVSMFKNLCYKWGSTLTPSEVAEKVKHFFKYYS 72
           QLDEVDMGMTYEELSVYGR+RKIFRCGPVSMFKNLCYKWG+ L+P+EVAEKVK+FFKYYS
Sbjct: 584 QLDEVDMGMTYEELSVYGRMRKIFRCGPVSMFKNLCYKWGTKLSPAEVAEKVKYFFKYYS 643

Query: 73  INRHKMTVLTPSYHAE 88
           INRHKMTVLTPSYHAE
Sbjct: 644 INRHKMTVLTPSYHAE 659