Jatropha Genome Database

JcCB0471671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0471671.10 + phase: 0 
         (316 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G37130.1 | Symbols: NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2 |...   449   e-127
AT1G77760.1 | Symbols: NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE...   442   e-124
AT5G17770.1 | Symbols: ATCBR, CBR1 | ATCBR (ARABIDOPSIS THALIANA...   181   6e-46
AT5G20080.1 | Symbols:  | NADH-cytochrome b5 reductase, putative...   155   4e-38

>AT1G37130.1 | Symbols: NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2 |
           NIA2 (NITRATE REDUCTASE 2); nitrate reductase (NADH)/
           nitrate reductase | chr1:14158617-14161652 FORWARD
          Length = 917

 Score =  449 bits (1156), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/318 (67%), Positives = 262/318 (82%), Gaps = 9/318 (2%)

Query: 1   MLEDYRIGELXXXXXXXXXXXXXXXXXXVHGASDMTQTHLAPIKEVSFAPVRNIALI-PR 59
           MLEDYRIGEL                  VHG+S +    LAPI E +  PVRN+AL+ PR
Sbjct: 607 MLEDYRIGELITTGYSSDSSSPNNS---VHGSSAVFSL-LAPIGEAT--PVRNLALVNPR 660

Query: 60  EKISCKLIKKESLSHDVRLFRFALPSEDQVLGLPVGKHIYLCATIEDKLCMRAYTPTSTI 119
            K+  +L++K S+SHDVR FRFALP ED VLGLPVGKHI+LCATI DKLC+RAYTP+ST+
Sbjct: 661 AKVPVQLVEKTSISHDVRKFRFALPVEDMVLGLPVGKHIFLCATINDKLCLRAYTPSSTV 720

Query: 120 EAVGYFDLVIKIYFKGVHPKFPNGGLMSQYLNSLQLGASIDVKGPLGHIEYVGRGKFMVH 179
           + VGYF+LV+KIYF GVHP+FPNGGLMSQYL+SL +G+++++KGPLGH+EY+G+G F VH
Sbjct: 721 DVVGYFELVVKIYFGGVHPRFPNGGLMSQYLDSLPIGSTLEIKGPLGHVEYLGKGSFTVH 780

Query: 180 GKPKSAKKLTMLAGGTGITPIYQVVQAILKDPEDDTEMYVVYANRTEDDILLREELDSWA 239
           GKPK A KL MLAGGTGITP+YQ++QAILKDPED+TEMYV+YANRTE+DILLREELD WA
Sbjct: 781 GKPKFADKLAMLAGGTGITPVYQIIQAILKDPEDETEMYVIYANRTEEDILLREELDGWA 840

Query: 240 KEYSDRLKVWYVVQESIKEGWQYSVGFITESILREHVPEGSDDT-LALACGPPPMIQFAV 298
           ++Y DRLKVWYVV ES KEGW YS GFI+E+I+REH+P+G D + LA+ACGPPPMIQFAV
Sbjct: 841 EQYPDRLKVWYVV-ESAKEGWAYSTGFISEAIMREHIPDGLDGSALAMACGPPPMIQFAV 899

Query: 299 QPNLEKMNYDIKDSLLVF 316
           QPNLEKM Y+IK+  L+F
Sbjct: 900 QPNLEKMQYNIKEDFLIF 917


>AT1G77760.1 | Symbols: NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE
           1); nitrate reductase | chr1:29236005-29239367 REVERSE
          Length = 917

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/318 (67%), Positives = 261/318 (82%), Gaps = 12/318 (3%)

Query: 1   MLEDYRIGELXXXXXXXXXXXXXXXXXXVHGASDMTQTHLAPIKEVSFAPVRNIALI-PR 59
           +LEDYRIGEL                  VHGAS+     LAPIKE++  P +NIAL+ PR
Sbjct: 610 LLEDYRIGELITTGYDSSPNVS------VHGASNFGPL-LAPIKELT--PQKNIALVNPR 660

Query: 60  EKISCKLIKKESLSHDVRLFRFALPSEDQVLGLPVGKHIYLCATIEDKLCMRAYTPTSTI 119
           EKI  +LI+K S+SHDVR FRFALPSEDQ LGLPVGKH+++CA I DKLC+RAYTPTS I
Sbjct: 661 EKIPVRLIEKTSISHDVRKFRFALPSEDQQLGLPVGKHVFVCANINDKLCLRAYTPTSAI 720

Query: 120 EAVGYFDLVIKIYFKGVHPKFPNGGLMSQYLNSLQLGASIDVKGPLGHIEYVGRGKFMVH 179
           +AVG+ DLV+K+YFK VHP+FPNGGLMSQ+L+SL +G+ ID+KGPLGHIEY G+G F+V 
Sbjct: 721 DAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSMIDIKGPLGHIEYKGKGNFLVS 780

Query: 180 GKPKSAKKLTMLAGGTGITPIYQVVQAILKDPEDDTEMYVVYANRTEDDILLREELDSWA 239
           GKPK AKKL MLAGGTGITPIYQ++Q+IL DPED+TEMYVVYANRTEDDIL+REEL+ WA
Sbjct: 781 GKPKFAKKLAMLAGGTGITPIYQIIQSILSDPEDETEMYVVYANRTEDDILVREELEGWA 840

Query: 240 KEYSDRLKVWYVVQESIKEGWQYSVGFITESILREHVPEGSD-DTLALACGPPPMIQFAV 298
            ++ +RLK+WYVV E  KEGW YS GFITE++LREH+PEG + ++LALACGPPPMIQFA+
Sbjct: 841 SKHKERLKIWYVV-EIAKEGWSYSTGFITEAVLREHIPEGLEGESLALACGPPPMIQFAL 899

Query: 299 QPNLEKMNYDIKDSLLVF 316
           QPNLEKM Y++K+ LL+F
Sbjct: 900 QPNLEKMGYNVKEDLLIF 917


>AT5G17770.1 | Symbols: ATCBR, CBR1 | ATCBR (ARABIDOPSIS THALIANA
           NADH:CYTOCHROME B5 REDUCTASE 1); cytochrome-b5 reductase
           | chr5:5864543-5866495 REVERSE
          Length = 281

 Score =  181 bits (458), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 99/257 (38%), Positives = 151/257 (58%), Gaps = 22/257 (8%)

Query: 52  RNIALIPREKISCKLIKKESLSHDVRLFRFALPSEDQVLGLPVGKHIYLCATI-EDKLCM 110
           R + L P      KL+K+  LSH+V  F F LP+   VLGLP+G+HI       + +  +
Sbjct: 38  RRVCLDPENFKEFKLVKRHQLSHNVAKFVFELPTSTSVLGLPIGQHISCRGKDGQGEDVI 97

Query: 111 RAYTPTSTIEAVGYFDLVIKIYFKGVHPKFPNGGLMSQYLNSLQLGASIDVKGPLGHIEY 170
           + YTPT+    VG F+LVIK+Y     P+    G MS +   +++G  + VKGP G  +Y
Sbjct: 98  KPYTPTTLDSDVGRFELVIKMY-----PQ----GRMSHHFREMRVGDHLAVKGPKGRFKY 148

Query: 171 VGRGKFMVHGKPKSAKKLTMLAGGTGITPIYQVVQAILKDPEDDTEMYVVYANRTEDDIL 230
                     +P   +   MLAGG+GITP++QV +AIL++P D T+++++YAN T DDIL
Sbjct: 149 ----------QPGQFRAFGMLAGGSGITPMFQVARAILENPTDKTKVHLIYANVTYDDIL 198

Query: 231 LREELDSWAKEYSDRLKVWYVVQESIKEGWQYSVGFITESILREHVPEGSDDTLALACGP 290
           L+EEL+     Y ++ K++YV+ +   E W   VGF+++ +++ H P  + D   L CGP
Sbjct: 199 LKEELEGLTTNYPEQFKIFYVLNQP-PEVWDGGVGFVSKEMIQTHCPAPASDIQILRCGP 257

Query: 291 PPMIQFAVQPNLEKMNY 307
           PPM + A+  NLE + Y
Sbjct: 258 PPMNK-AMAANLEALGY 273


>AT5G20080.1 | Symbols:  | NADH-cytochrome b5 reductase, putative |
           chr5:6782708-6786360 FORWARD
          Length = 328

 Score =  155 bits (391), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 146/248 (58%), Gaps = 30/248 (12%)

Query: 55  ALIPREKISCKLIKKESLSHDVRLFRFAL-PSEDQVLGLPVGKHIYLCATI------EDK 107
           AL P + +  KL     +SH+ +LFRF+  PS +  LGL V   +   A +      + K
Sbjct: 72  ALNPDKWLEFKLQDTARVSHNTQLFRFSFDPSAE--LGLHVASCLLTRAPLGYNAEGKTK 129

Query: 108 LCMRAYTPTSTIEAVGYFDLVIKIYFKGVHPKFPNGGLMSQYLNSLQLGASIDVKGPLGH 167
             +R YTP S  EA GYFDL+IK+Y        P+G  MSQ+  SL+ G  ++VKGP+  
Sbjct: 130 YVIRPYTPISDPEAKGYFDLLIKVY--------PDGK-MSQHFASLKPGDVLEVKGPVEK 180

Query: 168 IEYVGRGKFMVHGKPKSAKKLTMLAGGTGITPIYQVVQAILKDPEDDTEMYVVYANRTED 227
            +Y           P   K + M+AGG+GITP+ QV+ AI+K+PED+T++ ++YAN + D
Sbjct: 181 FKY----------SPNMKKHIGMIAGGSGITPMLQVIDAIVKNPEDNTQISLLYANVSPD 230

Query: 228 DILLREELDSWAKEYSDRLKVWYVVQESIKEGWQYSVGFITESILREHVPEGSDDTLALA 287
           DILL+++LD     + + LK++Y V    K  W+  VG+I++ +  + +P  +DDTL L 
Sbjct: 231 DILLKQKLDVLQANHPN-LKIFYTVDNPTKN-WKGGVGYISKDMALKGLPLPTDDTLILV 288

Query: 288 CGPPPMIQ 295
           CGPP M++
Sbjct: 289 CGPPGMME 296