Jatropha Genome Database
- JcCB0470521.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0470521.10 + phase: 0
(86 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC... 115 6e-27
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC... 115 6e-27
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3 (ARAB... 112 3e-26
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5 | ARAC6... 112 4e-26
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 110 2e-25
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-L... 107 2e-24
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2 (RHO-R... 104 1e-23
AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2 (ARAB... 97 2e-21
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11 | ARAC10; GTP bi... 97 3e-21
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | ROP10 (RH... 96 5e-21
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 ... 88 8e-19
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding ... 82 5e-17
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1;
GTP binding | chr2:7740313-7741942 FORWARD
Length = 197
Score = 115 bits (288), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 65/77 (84%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
+LRDD QFFIDHPGA PITTAQGEEL+KLIGAPAYIECSSKTQ+NVKGVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180
Query: 70 PXXXXXXXXGQTSCSIL 86
P Q +CSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1;
GTP binding | chr2:7740313-7741942 FORWARD
Length = 197
Score = 115 bits (288), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 65/77 (84%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
+LRDD QFFIDHPGA PITTAQGEEL+KLIGAPAYIECSSKTQ+NVKGVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180
Query: 70 PXXXXXXXXGQTSCSIL 86
P Q +CSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3
(ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase |
chr4:16673176-16674540 FORWARD
Length = 198
Score = 112 bits (281), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
+LRDD QFF +HPGA PI+TAQGEEL+KLIGAPAYIECS+KTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180
Query: 70 P 70
P
Sbjct: 181 P 181
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5 | ARAC6
(ARABIDOPSIS RAC-LIKE 6); GTP binding |
chr4:17024051-17025514 REVERSE
Length = 197
Score = 112 bits (281), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 64/77 (83%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
+LRDD QFFIDHPGA PITT QGEEL+KLIGAPAYIECSSK+Q+NVKGVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180
Query: 70 PXXXXXXXXGQTSCSIL 86
P Q +CSIL
Sbjct: 181 PKQKKKKNKAQKACSIL 197
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | ROP1
(RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding /
GTPase activating protein binding / GTPase/ protein
binding | chr3:19043197-19044215 FORWARD
Length = 197
Score = 110 bits (274), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 62/77 (80%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
+LRDD QFFIDHPGA PITTAQGEELRK IGAP YIECSSKTQ+NVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180
Query: 70 PXXXXXXXXGQTSCSIL 86
P Q +CSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-LIKE
GTP BINDING PROTEIN 5); GTP binding / GTPase |
chr1:28475964-28477377 FORWARD
Length = 196
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 53/58 (91%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVL 67
+LRDD QFFIDHPGA PITT QGEEL+KLIG+P YIECSSKTQQNVK VFDAAIKVVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2
(RHO-RELATED PROTEIN FROM PLANTS 2); GTP binding |
chr1:6967223-6968603 FORWARD
Length = 195
Score = 104 bits (260), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 52/58 (89%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVL 67
+LRDD QFFIDHPGA PITT QGEEL+KLIG+ YIECSSKTQQNVK VFDAAIKVVL
Sbjct: 120 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVL 177
>AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2
(ARABIDOPSIS RAC-LIKE 2); GTP binding |
chr5:18643761-18645758 FORWARD
Length = 201
Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 50/59 (84%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQ 68
+LRDD QF DHPGAA ITTAQGEELRK+IGA Y+ECSSKTQQNVK VFD AI+V L+
Sbjct: 121 DLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALR 179
>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11 | ARAC10; GTP
binding | chr5:25237236-25238939 FORWARD
Length = 215
Score = 96.7 bits (239), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 51/60 (85%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
+LR+D + DHPG +P+TTAQGEELRKLIGA YIECSSKTQQNVK VFD+AIK V++P
Sbjct: 123 DLREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAIKEVIKP 182
>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | ROP10
(RHO-RELATED PROTEIN FROM PLANTS 10); GTP binding /
GTPase | chr3:17731561-17733241 FORWARD
Length = 208
Score = 95.5 bits (236), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 51/60 (85%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
+LR+D + DHPG +P+TT+QGEELRK IGA YIECSSKTQQNVK VFDAAIKVV++P
Sbjct: 123 DLREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVIKP 182
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9
(RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding |
chr4:14278289-14279705 FORWARD
Length = 209
Score = 88.2 bits (217), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Query: 10 NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
+LRDD + DH IT+ QGEELRK IGA AYIECSSKTQQNVK VFD AIKVVLQP
Sbjct: 121 DLRDDKGYLADHTNV--ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 178
Query: 70 P 70
P
Sbjct: 179 P 179
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding |
chr2:18429276-18430636 FORWARD
Length = 209
Score = 82.4 bits (202), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 50/78 (64%)
Query: 9 TNLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQ 68
++LRD+ QF ++PGA I QG+ELRK IGA AYIECSSK Q NVK VFD AIKVVL
Sbjct: 132 SDLRDNMQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKVVLH 191
Query: 69 PPXXXXXXXXGQTSCSIL 86
PP C +L
Sbjct: 192 PPSKTKKRKRKIGLCHVL 209