Jatropha Genome Database

JcCB0469561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0469561.10 + phase: 0 /partial
         (89 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18700.3 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    66   3e-12
AT1G18700.2 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    66   4e-12
AT1G18700.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    66   4e-12

>AT1G18700.3 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443046 FORWARD
          Length = 695

 Score = 66.2 bits (160), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 33/40 (82%)

Query: 5   FEVESAPAIVFLKDPGVKPVVFHGLFNNSWFSDVMEKNKQ 44
            EVESAPAIV +KDPG KPVV+HG  N +WF D++E+NKQ
Sbjct: 328 LEVESAPAIVIMKDPGSKPVVYHGSGNRTWFLDILEQNKQ 367


>AT1G18700.2 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443814 FORWARD
          Length = 705

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 33/40 (82%)

Query: 5   FEVESAPAIVFLKDPGVKPVVFHGLFNNSWFSDVMEKNKQ 44
            EVESAPAIV +KDPG KPVV+HG  N +WF D++E+NKQ
Sbjct: 333 LEVESAPAIVIMKDPGSKPVVYHGSGNRTWFLDILEQNKQ 372


>AT1G18700.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443046 FORWARD
          Length = 700

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 33/40 (82%)

Query: 5   FEVESAPAIVFLKDPGVKPVVFHGLFNNSWFSDVMEKNKQ 44
            EVESAPAIV +KDPG KPVV+HG  N +WF D++E+NKQ
Sbjct: 333 LEVESAPAIVIMKDPGSKPVVYHGSGNRTWFLDILEQNKQ 372