Jatropha Genome Database

JcCB0469261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0469261.10 - phase: 0 /partial
         (402 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67560.1 | Symbols:  | lipoxygenase family protein | chr1:253...   313   9e-86
AT1G72520.1 | Symbols:  | lipoxygenase, putative | chr1:27308611...   290   1e-78
AT1G17420.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion b...   278   3e-75
AT3G22400.1 | Symbols: LOX5 | LOX5; electron carrier/ iron ion b...   171   6e-43
AT1G55020.1 | Symbols: LOX1 | LOX1; lipoxygenase | chr1:20525798...   169   2e-42
AT3G45140.1 | Symbols: LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2); lip...   156   2e-38

>AT1G67560.1 | Symbols:  | lipoxygenase family protein |
           chr1:25319926-25324117 FORWARD
          Length = 917

 Score =  313 bits (803), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 187/404 (46%), Positives = 238/404 (58%), Gaps = 22/404 (5%)

Query: 8   SPLKSKINSR---RSPAVGVAGNNGVKLTTRVPVSRVNYGSSIRAAISSEDKTVESA--- 61
           SP+K+  N     +SPA         +   RVP+SR      +RA IS E+K V+     
Sbjct: 5   SPVKTNFNGVSLVKSPAFSALS---CRKQHRVPISR-----QVRAVISREEKAVDQEDGK 56

Query: 62  KSNNNEIRGRSVLSSSLDEKKGRGIDVRAVITIRKKMKEKINEKFDDQWEYFVNXXXXXX 121
           KS N  +   S       +  G    V AV+ IRKK+KEK+ E+F+ Q E F+       
Sbjct: 57  KSTNKPLINSSQFPWQRSKYTGSKT-VTAVVKIRKKIKEKLTERFEHQLELFMKAIGQGM 115

Query: 122 XXXXXSEEIDPVTNSG-KSVKSTVRGWLPKPSNHAHIIEYAADFTVPYDFGNPGAVLITN 180
                SEEIDP T  G KS++S V G LPK       + + ADFTVP +FG PGA+L+TN
Sbjct: 116 LIQLVSEEIDPETGKGRKSLESPVMG-LPKAVKDPRYLVFTADFTVPINFGKPGAILVTN 174

Query: 181 LHGKEFYLVEIVIHGFDGSPFFFSANTWIHSQKDNPESRIIFRNQAYLPSQTPPGIKDLR 240
           L   E  L EI+I     +   F ANTWIHS+ DNP++RIIFR+Q  LPS+TP GIK+LR
Sbjct: 175 LLSTEICLSEIIIEDSTDT-ILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKELR 233

Query: 241 HEDLLSIRGNGKGKRKPYDRIYDYATYNDLGNPDKDEDLARPVVGGSKDLPYPRRCRTGR 300
            +DL+S+RG+GKG+RKP++RIYDY  YNDLG+P K E + RPV+ G  + PYPRRCRTGR
Sbjct: 234 EKDLVSVRGDGKGERKPHERIYDYDVYNDLGDPRKTERV-RPVL-GVPETPYPRRCRTGR 291

Query: 301 PPTKTDPLSESRIEKPRPVYVPRDETFEEIKQSTFSAGRLKALLHNXXXXXXXXXXXXDV 360
           P    DP  ESR ++    YVPRDE FEEIK+ TF AGR KAL HN            D+
Sbjct: 292 PLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDI 351

Query: 361 PFTCFSDIDKLYNDGLLLKAEEHKLVHPA--VGKVMKQVLSVGE 402
           PFTCFSDID LY   ++L   E K       +G  M  +L+V E
Sbjct: 352 PFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGILNVTE 395


>AT1G72520.1 | Symbols:  | lipoxygenase, putative |
           chr1:27308611-27312589 FORWARD
          Length = 926

 Score =  290 bits (742), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 147/293 (50%), Positives = 187/293 (63%), Gaps = 4/293 (1%)

Query: 88  VRAVITIRKKMKEKINEKFDDQWEYFVNXXXXXXXXXXXSEEIDPVTNSGKSVKSTV-RG 146
           VRAV T+R K KE   E      + F +           S ++DP TN  K  K+ V + 
Sbjct: 92  VRAVATVRNKNKEDFKETLVKHLDAFTDKIGRNVVLELMSTQVDPKTNEPKKSKAAVLKD 151

Query: 147 WLPKPSNHAHIIEYAADFTVPYDFGNPGAVLITNLHGKEFYLVEIVIHGFDGSPFFFSAN 206
           W  K ++ A  + Y A+FTV   FG+PGA+ +TN H KEF+L  I I GF   P  F  N
Sbjct: 152 WSKKSNSKAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCN 211

Query: 207 TWIHSQKDNPESRIIFRNQAYLPSQTPPGIKDLRHEDLLSIRGNGKGKRKPYDRIYDYAT 266
           +W+ SQKD+P  RI+F NQ YLPS+TP G++ LR ++L ++RGNGKG+RK  DRIYDY  
Sbjct: 212 SWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDV 271

Query: 267 YNDLGNPDKDEDLARPVVGGSKDLPYPRRCRTGRPPTKTDPLSESRIEKPRPVYVPRDET 326
           YND+GNPD   +LARP +GG ++ PYPRRCRTGR  T TD +SE R+EKP P+YVPRDE 
Sbjct: 272 YNDIGNPDISRELARPTLGG-REFPYPRRCRTGRSSTDTDMMSERRVEKPLPMYVPRDEQ 330

Query: 327 FEEIKQSTFSAGRLKALLHNXXXXXXXXXXXXDVPFTCFSDIDKLYNDGLLLK 379
           FEE KQ+TF+A RLKA+LHN            D  F  F +ID LY +GLLLK
Sbjct: 331 FEESKQNTFAACRLKAVLHNLIPSLKASILAED--FANFGEIDSLYKEGLLLK 381


>AT1G17420.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion
           binding / lipoxygenase/ metal ion binding /
           oxidoreductase, acting on single donors with
           incorporation of molecular oxygen, incorporation of two
           atoms of oxygen | chr1:5977512-5981384 FORWARD
          Length = 919

 Score =  278 bits (712), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 144/305 (47%), Positives = 190/305 (62%), Gaps = 4/305 (1%)

Query: 76  SSLDEKKGRGIDVRAVITIRKKMKEKINEKFDDQWEYFVNXXXXXXXXXXXSEEIDPVTN 135
           S  +EK      VRAV+T+R K KE + E      + F +           S ++DP T 
Sbjct: 74  SEEEEKAAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFADKIGRNIVLELISTQLDPKTK 133

Query: 136 -SGKSVKSTVRGWLPKPSNHAHIIEYAADFTVPYDFGNPGAVLITNLHGKEFYLVEIVIH 194
              KS  + ++ W  K    A  + Y A+FTV   FG+PGA+ + N H KEF+L  I I 
Sbjct: 134 LPKKSNAAVLKDWSKKSKTKAERVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIE 193

Query: 195 GFDGSPFFFSANTWIHSQKDNPESRIIFRNQAYLPSQTPPGIKDLRHEDLLSIRGNGKGK 254
           GF   P  F  N+W+ SQKD+P+ RI F NQ YLP++TP G++ LR ++L ++RG+G G 
Sbjct: 194 GFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGV 253

Query: 255 RKPYDRIYDYATYNDLGNPDKDEDLARPVVGGSKDLPYPRRCRTGRPPTKTDPLSESRIE 314
           RK  DRIYD+  YNDLGNPDK  +L+RP +GG K++PYPRRCRTGR  T +D  +ESR+E
Sbjct: 254 RKLSDRIYDFDVYNDLGNPDKSSELSRPKLGG-KEVPYPRRCRTGRQSTVSDKDAESRVE 312

Query: 315 KPRPVYVPRDETFEEIKQSTFSAGRLKALLHNXXXXXXXXXXXXDVPFTCFSDIDKLYND 374
           KP P+YVPRDE FEE KQ TF+AGRLKA+LH+            D  F  F +ID+LY +
Sbjct: 313 KPLPMYVPRDEQFEESKQDTFAAGRLKAVLHHLIPSLKASIVAED--FADFGEIDRLYKE 370

Query: 375 GLLLK 379
           GLLLK
Sbjct: 371 GLLLK 375


>AT3G22400.1 | Symbols: LOX5 | LOX5; electron carrier/ iron ion
           binding / lipoxygenase/ metal ion binding /
           oxidoreductase, acting on single donors with
           incorporation of molecular oxygen, incorporation of two
           atoms of oxygen | chr3:7927011-7931167 FORWARD
          Length = 886

 Score =  171 bits (434), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 136/248 (54%), Gaps = 10/248 (4%)

Query: 147 WLPKPSNHAHIIEYAADFTVPYD--FGNPGAVLITNLHGKEFYLVEIVIHGF-DG----S 199
           W+ K        E A   T  +D   G P A +I N H  +FYL  + + GF DG    +
Sbjct: 97  WVTKIKTSVTAEETAFGVTFDWDESMGPPAAFVIKNHHHSQFYLKSLTLRGFPDGEGGAT 156

Query: 200 PFFFSANTWIHSQKDNPESRIIFRNQAYLPSQTPPGIKDLRHEDLLSIRGNGKG-KRKPY 258
              F  N+WI+        R+ F N+AYLPS+TP  IK+LR E+L ++RGN KG + K +
Sbjct: 157 AIHFICNSWIYPNHRYRSDRVFFSNKAYLPSETPELIKELREEELKNLRGNEKGGEFKEW 216

Query: 259 DRIYDYATYNDLGNPDKDEDLARPVVGGSKDLPYPRRCRTGRPPTKTDPLSESRIEKPR- 317
           DR+YDYA YNDLG PDK  D  RPV+GGS +LPYPRR +TGR  TK+DP SESR+     
Sbjct: 217 DRVYDYAYYNDLGAPDKGPDSVRPVLGGSPELPYPRRGKTGRKSTKSDPKSESRLALLNL 276

Query: 318 PVYVPRDETFEEIKQSTFSAGRLKALLHNXXXXXXXXXXXXDVPFTCFSDIDKLYNDGLL 377
            +YVPRDE F  +K S F A  LK++                  F  F D+  LY DG +
Sbjct: 277 NIYVPRDERFSHVKFSDFLAYALKSVTQVLVPEIASVCDKTINEFDSFEDVFHLY-DGSI 335

Query: 378 LKAEEHKL 385
             A  H +
Sbjct: 336 KLANGHTI 343


>AT1G55020.1 | Symbols: LOX1 | LOX1; lipoxygenase |
           chr1:20525798-20530143 FORWARD
          Length = 859

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/222 (41%), Positives = 123/222 (55%), Gaps = 6/222 (2%)

Query: 160 YAADFTVPYDFGNPGAVLITNLHGKEFYLVEIVIHGFDG-SPFFFSANTWIHSQKDNPES 218
           +   F    DFG PGA LI N H  EF L  + +    G     +  N+WI+  K     
Sbjct: 97  FKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVPGHGRVHYICNSWIYPAKHYTTD 156

Query: 219 RIIFRNQAYLPSQTPPGIKDLRHEDLLSIRGNGKGKRKPYDRIYDYATYNDLGNPDKDED 278
           R+ F N+ YLP +TP  +   R E+L+S+RG G+G+ K +DR+YDYA YNDLG P K+  
Sbjct: 157 RVFFSNKTYLPHETPATLLKYREEELVSLRGTGEGELKEWDRVYDYAYYNDLGVPPKN-- 214

Query: 279 LARPVVGGSKDLPYPRRCRTGRPPTKTDPLSESR--IEKPRPVYVPRDETFEEIKQSTFS 336
             RPV+GG+++ PYPRR RTGR PTK DP +ESR  I     +YVPRDE F  +K S F 
Sbjct: 215 -PRPVLGGTQEYPYPRRGRTGRKPTKEDPQTESRLPITSSLDIYVPRDERFGHLKMSDFL 273

Query: 337 AGRLKALLHNXXXXXXXXXXXXDVPFTCFSDIDKLYNDGLLL 378
           A  LKA+                  F  F D+ K+Y +G+ L
Sbjct: 274 AYALKAIAQFIQPALEAVFDDTPKEFDSFEDVLKIYEEGIDL 315


>AT3G45140.1 | Symbols: LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2);
           lipoxygenase | chr3:16525437-16529233 FORWARD
          Length = 896

 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 134/242 (55%), Gaps = 9/242 (3%)

Query: 159 EYAADFTVPYDFGNPGAVLITNLHGKEFYLVEIVIHGFDGSPFFFSANTWIHSQKDNPES 218
           +Y  +F +P DFG  GA+ I N + ++ +L  + +    G    F+  +W+  +  +P  
Sbjct: 136 KYECEFEMPEDFGPVGAIKIQNQYHRQLFLKGVELK-LPGGSITFTCESWVAPKSVDPTK 194

Query: 219 RIIFRNQAYLPSQTPPGIKDLRHEDLLSIRGNGK---GKRKPYDRIYDYATYNDLGNPDK 275
           RI F +++YLPSQTP  +K  R E+L +++G  +   G+   ++RIYDY  YND+G+PD 
Sbjct: 195 RIFFSDKSYLPSQTPEPLKKYRKEELETLQGKNREEVGEFTKFERIYDYDVYNDVGDPDN 254

Query: 276 DEDLARPVVGGSKDLPYPRRCRTGRPPTKTDPLSESRIEKPRPVYVPRDETFEEIKQSTF 335
           D +LARPV+GG    PYPRRC+TGR P +TDP SE R       YVPRDE F   K ++F
Sbjct: 255 DPELARPVIGGLTH-PYPRRCKTGRKPCETDPSSEQRYGG--EFYVPRDEEFSTAKGTSF 311

Query: 336 SAGRLKALLHNXXXXXXXXXXXXDVPFTCFSDIDKLYNDGLLLKAEEHKLVHPAVGKVMK 395
           +   + A L +              PF  F  I  L+ +G+ L  +   L  P + +++K
Sbjct: 312 TGKAVLAALPSIFPQIESVLLSPQEPFPHFKAIQNLFEEGIQLPKDAGLL--PLLPRIIK 369

Query: 396 QV 397
            +
Sbjct: 370 AL 371