Jatropha Genome Database

JcCB0468081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0468081.10 - phase: 0 /pseudo
         (428 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30000.1 | Symbols:  | glycoside hydrolase family 47 protein ...   509   e-145
AT1G51590.1 | Symbols:  | mannosyl-oligosaccharide 1,2-alpha-man...   221   5e-58
AT3G21160.1 | Symbols:  | mannosyl-oligosaccharide 1,2-alpha-man...   208   7e-54
AT1G51590.2 | Symbols:  | mannosyl-oligosaccharide 1,2-alpha-man...   202   2e-52
AT5G43710.1 | Symbols:  | glycoside hydrolase family 47 protein ...   134   1e-31
AT1G27520.1 | Symbols:  | glycoside hydrolase family 47 protein ...   108   6e-24

>AT1G30000.1 | Symbols:  | glycoside hydrolase family 47 protein |
           chr1:10509532-10512320 REVERSE
          Length = 624

 Score =  509 bits (1312), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 239/309 (77%), Positives = 274/309 (88%), Gaps = 1/309 (0%)

Query: 76  NADPKWTERQQKVKDAFIHAWSGYKNYAMGYDELMPLSKRGVDGLGGLGATVVDALDTAM 135
           N+DPKW  RQQ VK+AF HAWSGY+ YAMGYDELMP+S++GVDGLGGLGATVVDALDTAM
Sbjct: 120 NSDPKWAARQQSVKEAFDHAWSGYRKYAMGYDELMPISQKGVDGLGGLGATVVDALDTAM 179

Query: 136 IMGADDIVSEAGSWIEKHLNDRISKKGQVNLFETTIRVLGGLLSAYHLSGGEQGT-DSVH 194
           IMG D+IVSEAGSW+E HL +RIS+KGQVNLFETTIRVLGGLLSAYHLSGGEQGT +  H
Sbjct: 180 IMGLDNIVSEAGSWVETHLLERISQKGQVNLFETTIRVLGGLLSAYHLSGGEQGTVNMTH 239

Query: 195 KGPKPIVYLETARNLADRLLLAFTSSPTPIPFSDVVLHDPSAHSSPDGLSSTSEVSTLQL 254
            GPKP++YL  A++LADRLL AFTSSPTP+PF DV+LH+ +AH +P G SST+EV+++QL
Sbjct: 240 VGPKPVIYLNIAKDLADRLLSAFTSSPTPVPFCDVILHESTAHPAPGGASSTAEVASVQL 299

Query: 255 EFNYLSTVSGDPKYGVEAMKVLAHMKNLPKVEGLVPIYISPASGEFSGENIRLGSRGDSY 314
           EFNYLS++SGDPKY  EAMKVLAH+K LPK EGLVPIYISP +G+F GENIRLGSRGDSY
Sbjct: 300 EFNYLSSISGDPKYSTEAMKVLAHIKTLPKTEGLVPIYISPQTGDFVGENIRLGSRGDSY 359

Query: 315 YEYLIKVWLQQGTSRDANFTYLYNMYEEAIKGVRNLLVQKSIPNGLVFVGELPNGPKGSF 374
           YEYLIKVWLQQG   ++NFTYL++MY EA+KGVR+LLVQ SIP GLVFVGELP G KG F
Sbjct: 360 YEYLIKVWLQQGAKLNSNFTYLHDMYIEAMKGVRHLLVQNSIPKGLVFVGELPYGSKGEF 419

Query: 375 SPKMDHLVC 383
           SPKMDHLVC
Sbjct: 420 SPKMDHLVC 428


>AT1G51590.1 | Symbols:  | mannosyl-oligosaccharide
           1,2-alpha-mannosidase, putative | chr1:19128315-19132132
           REVERSE
          Length = 560

 Score =  221 bits (564), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 196/322 (60%), Gaps = 27/322 (8%)

Query: 66  NKPIHESEKLNADPKWTERQQKVKDAFIHAWSGYKNYAMGYDELMPLSKRGVDGLGGLGA 125
           NKP+   +    DP   +R+QKVK+A IHAWS Y+ YA G DEL P +K G D  GGLGA
Sbjct: 79  NKPLKTLKDAPEDPVDKQRRQKVKEAMIHAWSSYEKYAWGKDELQPRTKDGTDSFGGLGA 138

Query: 126 TVVDALDTAMIMGADDIVSEAGSWIEKHLNDRISKKGQVNLFETTIRVLGGLLSAYHLSG 185
           T+VD+LDT  IMG D+   +A  W+   L+    K    ++FETTIRV+GGLLSAY LSG
Sbjct: 139 TMVDSLDTLYIMGLDEQFQKAREWVASSLD--FDKDYDASMFETTIRVVGGLLSAYDLSG 196

Query: 186 GEQGTDSVHKGPKPIVYLETARNLADRLLLAFTSSPTPIPFSDVVLHDPSAHS---SPDG 242
            +             ++LE A+++ADRLL A+ ++PT IP++ + L + +AH+   +  G
Sbjct: 197 DK-------------MFLEKAKDIADRLLPAW-NTPTGIPYNIINLRNGNAHNPSWAAGG 242

Query: 243 LSSTSEVSTLQLEFNYLSTVSGDPKYGVEAMKVLAHM-KNLPKVEGLVPIYISPASGEFS 301
            S  ++  T QLEF  LS  +GDPKY  +  KV+  + KN P  +GL+PIYI+P +   S
Sbjct: 243 DSILADSGTEQLEFIALSQRTGDPKYQQKVEKVITELNKNFP-ADGLLPIYINPDNANPS 301

Query: 302 GENIRLGSRGDSYYEYLIKVWLQQGTSRDANFTYLYNMYEEAIKGVRNLLVQKSIPNGLV 361
                 G+ GDS+YEYL+KVW+ QG    A   Y  +M+E+++KG+ + LV+KS P+   
Sbjct: 302 YSTTTFGAMGDSFYEYLLKVWV-QGNKTSAVKPYR-DMWEKSMKGLLS-LVKKSTPSSFT 358

Query: 362 FVGELPNGPKGSFSPKMDHLVC 383
           ++ E  NG   +   KMD L C
Sbjct: 359 YICE-KNG--NNLIDKMDELAC 377


>AT3G21160.1 | Symbols:  | mannosyl-oligosaccharide
           1,2-alpha-mannosidase, putative | chr3:7414129-7418328
           REVERSE
          Length = 572

 Score =  208 bits (529), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 191/326 (58%), Gaps = 26/326 (7%)

Query: 61  EKVRNNKPIHESEKLNADPKWTERQQKVKDAFIHAWSGYKNYAMGYDELMPLSKRGVDGL 120
           + V  +  ++  + +  DP   +R Q+VK+A +HAWS Y+ YA G DEL P +K GVD  
Sbjct: 75  KSVTEDVSVNSLKDVQEDPVDAQRMQRVKEAMVHAWSSYEKYAWGQDELQPQTKDGVDSF 134

Query: 121 GGLGATVVDALDTAMIMGADDIVSEAGSWIEKHLNDRISKKGQVNLFETTIRVLGGLLSA 180
           GGLGAT++DALDT  IMG D+   +A  W+   L+    K    ++FETTIRV+GGLLSA
Sbjct: 135 GGLGATMIDALDTLYIMGLDEQFQKAREWVASSLD--FDKDYAASMFETTIRVVGGLLSA 192

Query: 181 YHLSGGEQGTDSVHKGPKPIVYLETARNLADRLLLAFTSSPTPIPFSDVVLHDPSAH--S 238
           Y LSG +             ++LE A ++ADRLL A+  + + IP++ + L   +AH  +
Sbjct: 193 YDLSGDK-------------IFLEKAMDIADRLLPAW-DTQSGIPYNIINLKHGNAHNPT 238

Query: 239 SPDGLSSTSEVSTLQLEFNYLSTVSGDPKYGVEAMKVLAHM-KNLPKVEGLVPIYISPAS 297
              G S  ++  T QLEF  LS  +GDPKY  +  KV++ + KN P  +GL+PIYI+P +
Sbjct: 239 WAGGDSILADSGTEQLEFIALSQRTGDPKYQQKVEKVISVLNKNFP-ADGLLPIYINPDT 297

Query: 298 GEFSGENIRLGSRGDSYYEYLIKVWLQQGTSRDANFTYLYNMYEEAIKGVRNLLVQKSIP 357
              S   I  G+ GDS+YEYL+KVW+    ++ +   +  +M+E+++ G+ + LV+KS P
Sbjct: 298 ANPSQSTITFGAMGDSFYEYLLKVWV--FGNKTSAVKHYRDMWEKSMNGLLS-LVKKSTP 354

Query: 358 NGLVFVGELPNGPKGSFSPKMDHLVC 383
               ++ E       S   KMD L C
Sbjct: 355 LSFTYICE---KSGNSLIDKMDELAC 377


>AT1G51590.2 | Symbols:  | mannosyl-oligosaccharide
           1,2-alpha-mannosidase, putative | chr1:19128315-19131406
           REVERSE
          Length = 456

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 180/295 (61%), Gaps = 27/295 (9%)

Query: 93  IHAWSGYKNYAMGYDELMPLSKRGVDGLGGLGATVVDALDTAMIMGADDIVSEAGSWIEK 152
           IHAWS Y+ YA G DEL P +K G D  GGLGAT+VD+LDT  IMG D+   +A  W+  
Sbjct: 2   IHAWSSYEKYAWGKDELQPRTKDGTDSFGGLGATMVDSLDTLYIMGLDEQFQKAREWVAS 61

Query: 153 HLNDRISKKGQVNLFETTIRVLGGLLSAYHLSGGEQGTDSVHKGPKPIVYLETARNLADR 212
            L+    K    ++FETTIRV+GGLLSAY LSG +             ++LE A+++ADR
Sbjct: 62  SLD--FDKDYDASMFETTIRVVGGLLSAYDLSGDK-------------MFLEKAKDIADR 106

Query: 213 LLLAFTSSPTPIPFSDVVLHDPSAHS---SPDGLSSTSEVSTLQLEFNYLSTVSGDPKYG 269
           LL A+ ++PT IP++ + L + +AH+   +  G S  ++  T QLEF  LS  +GDPKY 
Sbjct: 107 LLPAW-NTPTGIPYNIINLRNGNAHNPSWAAGGDSILADSGTEQLEFIALSQRTGDPKYQ 165

Query: 270 VEAMKVLAHM-KNLPKVEGLVPIYISPASGEFSGENIRLGSRGDSYYEYLIKVWLQQGTS 328
            +  KV+  + KN P  +GL+PIYI+P +   S      G+ GDS+YEYL+KVW+ QG  
Sbjct: 166 QKVEKVITELNKNFP-ADGLLPIYINPDNANPSYSTTTFGAMGDSFYEYLLKVWV-QGNK 223

Query: 329 RDANFTYLYNMYEEAIKGVRNLLVQKSIPNGLVFVGELPNGPKGSFSPKMDHLVC 383
             A   Y  +M+E+++KG+ + LV+KS P+   ++ E  NG   +   KMD L C
Sbjct: 224 TSAVKPYR-DMWEKSMKGLLS-LVKKSTPSSFTYICE-KNG--NNLIDKMDELAC 273


>AT5G43710.1 | Symbols:  | glycoside hydrolase family 47 protein |
           chr5:17552252-17556523 REVERSE
          Length = 624

 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/274 (36%), Positives = 150/274 (54%), Gaps = 22/274 (8%)

Query: 83  ERQQKVKDAFIHAWSGYKNYAMGYDELMPLSKRGVDGLGGLGATVVDALDTAMIMGADDI 142
           + + +V+  F HA+ GY N A   DEL PLS +G D LGG   T++D+LDT  ++G  + 
Sbjct: 39  QLRDEVRGMFYHAFDGYMNNAFPLDELRPLSCQGEDTLGGYALTLIDSLDTLALLGDRER 98

Query: 143 VSEAGSWIEKHLNDRISKKGQVNLFETTIRVLGGLLSAYHLSGGEQGTDSVHKGPKPIVY 202
            + +  WI K+L   I+K   V++FETTIRVLGGLLSA HL   +  T     G +   Y
Sbjct: 99  FTSSVEWIGKNLQFNINKT--VSVFETTIRVLGGLLSA-HLIASDYAT-----GMRIPSY 150

Query: 203 ----LETARNLADRLLLAFTSSPTPIPFSDV-VLHDPSAHSSPDGLSSTSEVSTLQLEFN 257
               L  A NLA R+L AF  +PT IPF  V +++    H S   ++ST+   TL LEF 
Sbjct: 151 NNELLVLAENLARRMLPAF-DTPTGIPFGSVNLMYGVDKHESK--ITSTAGGGTLSLEFG 207

Query: 258 YLSTVSGDPKYGVEAMKVLAHMKNLPKVEGLVPIYISPASGEFSGENIRLGSRGDSYYEY 317
            LS ++ DP +   A   +  +        LV  +I+  +GE++ ++  +G+  DS+YEY
Sbjct: 208 VLSRLTNDPVFEQVAKNAVRGLWARRSNLDLVGAHINVFTGEWTQKDAGIGTSIDSFYEY 267

Query: 318 LIKVWLQQGTSRDANFTYLYNMYEEAIKGVRNLL 351
           L+K ++  G        YLY +++EA +     L
Sbjct: 268 LLKAYILFGDEE-----YLY-IFQEAYRSAMQYL 295


>AT1G27520.1 | Symbols:  | glycoside hydrolase family 47 protein |
           chr1:9558752-9562091 FORWARD
          Length = 574

 Score =  108 bits (270), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 21/259 (8%)

Query: 83  ERQQKVKDAFIHAWSGYKNYAMGYDELMPLSKRGVDGLGGLG---------------ATV 127
           + ++KV++ F HA+  Y  YA  +DEL PL+K   D L  LG                T+
Sbjct: 36  QMREKVREMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLKLEHLPTDYNGSAVTL 95

Query: 128 VDALDTAMIMGADDIVSEAGSWIEKHLNDRISKKGQVNLFETTIRVLGGLLSAYHLSGGE 187
           V++L +  I+G      +   W+ ++L   I  +  VNLFE  IRVLGGL+SA+ L+   
Sbjct: 96  VESLSSLAILGNSTEFEKGVLWLSENLTFDIDAR--VNLFECNIRVLGGLISAHLLAIDP 153

Query: 188 QGTDSVHKGPKPIVYLETARNLADRLLLAFTSSPTPIPFSDVVLHDPSAHSSPDGLSSTS 247
              + + +G      L  A +L  R L AF  +PT +P++ + L +    +     +STS
Sbjct: 154 N--NRLIQGSYNNQLLRLAEDLGKRFLPAF-ETPTGLPYAWINLKNGVMENETTE-TSTS 209

Query: 248 EVSTLQLEFNYLSTVSGDPKYGVEAMKVLAHMKNLPKVEGLVPIYISPASGEFSGENIRL 307
              +L LE   LS ++GDP++   A++ L  +  +     L+   +   +GE+   +  +
Sbjct: 210 GCGSLVLEMGALSRLTGDPRFESAALRALRQLWRMRSSLDLLGTTLDVVTGEWIEYSSSI 269

Query: 308 GSRGDSYYEYLIKVWLQQG 326
           G+  DS+YEYL+K ++  G
Sbjct: 270 GAGVDSFYEYLLKAYILFG 288