Jatropha Genome Database

JcCB0465701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0465701.10 - phase: 0 /partial
         (114 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18700.3 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   139   4e-34
AT1G18700.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   139   4e-34
AT1G18700.2 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   139   5e-34
AT1G24120.1 | Symbols: ARL1 | ARL1 (ARG1-LIKE 1); heat shock pro...    49   6e-07
AT3G17830.1 | Symbols:  | DNAJ heat shock family protein | chr3:...    47   2e-06

>AT1G18700.3 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443046 FORWARD
          Length = 695

 Score =  139 bits (350), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 83/99 (83%)

Query: 16  PSLIKAYAVPFFLFAVSIFYQLVVLPRSFPPSHYDVLGIKRFSSIEEVKDAYEKLSSKWN 75
           PS +KAY VP FLF +++F+QL +LPRSFPPSHYDVLG+K +SS+++VKDAY+ ++SKW+
Sbjct: 12  PSGLKAYTVPIFLFVLAMFFQLFLLPRSFPPSHYDVLGVKMYSSVDDVKDAYQTVASKWD 71

Query: 76  SSAEVPSAADFIEIQYAYELLKNPLWKRDYDIFGIDEQL 114
           S + V   ADF++IQYAYELL N +WKRDYD++ IDE +
Sbjct: 72  SGSGVSLPADFVKIQYAYELLTNLVWKRDYDLYAIDESV 110


>AT1G18700.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443046 FORWARD
          Length = 700

 Score =  139 bits (350), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 83/99 (83%)

Query: 16  PSLIKAYAVPFFLFAVSIFYQLVVLPRSFPPSHYDVLGIKRFSSIEEVKDAYEKLSSKWN 75
           PS +KAY VP FLF +++F+QL +LPRSFPPSHYDVLG+K +SS+++VKDAY+ ++SKW+
Sbjct: 12  PSGLKAYTVPIFLFVLAMFFQLFLLPRSFPPSHYDVLGVKMYSSVDDVKDAYQTVASKWD 71

Query: 76  SSAEVPSAADFIEIQYAYELLKNPLWKRDYDIFGIDEQL 114
           S + V   ADF++IQYAYELL N +WKRDYD++ IDE +
Sbjct: 72  SGSGVSLPADFVKIQYAYELLTNLVWKRDYDLYAIDESV 110


>AT1G18700.2 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443814 FORWARD
          Length = 705

 Score =  139 bits (349), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 83/99 (83%)

Query: 16  PSLIKAYAVPFFLFAVSIFYQLVVLPRSFPPSHYDVLGIKRFSSIEEVKDAYEKLSSKWN 75
           PS +KAY VP FLF +++F+QL +LPRSFPPSHYDVLG+K +SS+++VKDAY+ ++SKW+
Sbjct: 12  PSGLKAYTVPIFLFVLAMFFQLFLLPRSFPPSHYDVLGVKMYSSVDDVKDAYQTVASKWD 71

Query: 76  SSAEVPSAADFIEIQYAYELLKNPLWKRDYDIFGIDEQL 114
           S + V   ADF++IQYAYELL N +WKRDYD++ IDE +
Sbjct: 72  SGSGVSLPADFVKIQYAYELLTNLVWKRDYDLYAIDESV 110


>AT1G24120.1 | Symbols: ARL1 | ARL1 (ARG1-LIKE 1); heat shock
           protein binding / unfolded protein binding |
           chr1:8529283-8531946 REVERSE
          Length = 436

 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 3/66 (4%)

Query: 49  YDVLGIKRFSSIEEVKDAYEKLSSKW--NSSAEVPSAAD-FIEIQYAYELLKNPLWKRDY 105
           Y+VLG+ R S+ +E+K AY KL+ K+  + +A  P AAD F E+ ++Y +L +P  +R +
Sbjct: 22  YEVLGVLRNSTDQEIKSAYRKLALKYHPDKTANDPVAADMFKEVTFSYNILSDPEKRRQF 81

Query: 106 DIFGID 111
           D  G +
Sbjct: 82  DSAGFE 87


>AT3G17830.1 | Symbols:  | DNAJ heat shock family protein |
           chr3:6101868-6104503 FORWARD
          Length = 517

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 29  FAVSIFYQLVVLPRSFPPSHYDVLGIKRFSSIEEVKDAYEKLSSKWNSSA-EVPSAAD-F 86
           F +S  Y+  V+  +    HY  L + R ++++E+K +Y KL+ K++    + P A D F
Sbjct: 45  FGISGGYRRRVITMAAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKF 104

Query: 87  IEIQYAYELLKNPLWKRDYDIFG 109
            +I  AYE+L +   +  YD FG
Sbjct: 105 KQISAAYEVLSDEEKRSAYDRFG 127