Jatropha Genome Database
- JcCB0465191.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0465191.10 - phase: 2 /pseudo/partial
(152 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76670.1 | Symbols: | transporter-related | chr1:28772890-28... 196 4e-51
AT5G42420.2 | Symbols: | transporter-related | chr5:16968819-16... 188 1e-48
AT1G21070.1 | Symbols: | transporter-related | chr1:7376148-737... 187 2e-48
AT5G42420.1 | Symbols: | transporter-related | chr5:16968819-16... 187 2e-48
AT4G09810.1 | Symbols: | transporter-related | chr4:6175415-617... 89 9e-19
AT4G39390.2 | Symbols: ATNST-KT1, NST-K1 | NST-K1 (NUCLEOTIDE SU... 89 1e-18
AT4G39390.1 | Symbols: ATNST-KT1, NST-K1 | NST-K1 (NUCLEOTIDE SU... 89 1e-18
AT1G34020.1 | Symbols: | transporter-related | chr1:12367359-12... 87 5e-18
AT1G06890.2 | Symbols: | transporter-related | chr1:2111728-211... 84 4e-17
AT1G06890.1 | Symbols: | transporter-related | chr1:2111728-211... 84 4e-17
AT2G30460.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 81 3e-16
AT2G30460.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 81 3e-16
AT2G28315.1 | Symbols: | LOCATED IN: membrane; CONTAINS InterPr... 74 2e-14
AT5G55950.1 | Symbols: | transporter-related | chr5:22658411-22... 54 5e-08
AT1G77610.1 | Symbols: | glucose-6-phosphate/phosphate transloc... 49 1e-06
>AT1G76670.1 | Symbols: | transporter-related |
chr1:28772890-28774569 REVERSE
Length = 347
Score = 196 bits (499), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 105/116 (90%)
Query: 36 IILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMVI 95
I+LSC+LAVFCN+SQYLCIGRFSA SFQVLGHMKTVCVLTLGWLLFDSE+TFKNI GM I
Sbjct: 231 ILLSCALAVFCNISQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSEMTFKNIAGMAI 290
Query: 96 AIAGMVVYSWAMEAEKSANAKATPHMKNSLTEEEIRLLKEGVESTPVKDIELGETK 151
AI GMV+YSWA++ EK NAK+TPH K+S+TE+EI+LLKEGVE +KD+ELG+TK
Sbjct: 291 AIVGMVIYSWAVDIEKQRNAKSTPHGKHSMTEDEIKLLKEGVEHIDLKDVELGDTK 346
>AT5G42420.2 | Symbols: | transporter-related |
chr5:16968819-16970225 FORWARD
Length = 283
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 103/120 (85%), Gaps = 2/120 (1%)
Query: 34 LFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGM 93
LFI+LSC LAVFCN+SQYLCIGRFSAVSFQV+GHMKTVC+LTLGWLLFDS +TFKN+ GM
Sbjct: 163 LFILLSCGLAVFCNISQYLCIGRFSAVSFQVIGHMKTVCILTLGWLLFDSAMTFKNVAGM 222
Query: 94 VIAIAGMVVYSWAMEAEKSA--NAKATPHMKNSLTEEEIRLLKEGVESTPVKDIELGETK 151
++AI GMV+YSWAME EK + AKA +K+SLTEEE LLKEGVE+T KD+ELG TK
Sbjct: 223 IVAIVGMVIYSWAMELEKQSIIAAKALNSVKHSLTEEEFELLKEGVETTQSKDVELGRTK 282
>AT1G21070.1 | Symbols: | transporter-related |
chr1:7376148-7377810 REVERSE
Length = 348
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/122 (70%), Positives = 103/122 (84%)
Query: 31 SLQLFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNI 90
S L I+LSC+LAVFCN+SQYLCIGRFSA SFQVLGHMKTVCVLTLGWL+FDSE+TFKNI
Sbjct: 227 SAMLCILLSCALAVFCNISQYLCIGRFSATSFQVLGHMKTVCVLTLGWLIFDSEMTFKNI 286
Query: 91 MGMVIAIAGMVVYSWAMEAEKSANAKATPHMKNSLTEEEIRLLKEGVESTPVKDIELGET 150
GMV+A+ GMV+YSWA+E EK +K PH K+S+TE+EI+LLKEG+E +KD+ELG
Sbjct: 287 AGMVLAVVGMVIYSWAVELEKQRKSKVIPHGKHSMTEDEIKLLKEGIEHMDLKDMELGNN 346
Query: 151 KG 152
K
Sbjct: 347 KA 348
>AT5G42420.1 | Symbols: | transporter-related |
chr5:16968819-16970225 FORWARD
Length = 350
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 103/120 (85%), Gaps = 2/120 (1%)
Query: 34 LFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGM 93
LFI+LSC LAVFCN+SQYLCIGRFSAVSFQV+GHMKTVC+LTLGWLLFDS +TFKN+ GM
Sbjct: 230 LFILLSCGLAVFCNISQYLCIGRFSAVSFQVIGHMKTVCILTLGWLLFDSAMTFKNVAGM 289
Query: 94 VIAIAGMVVYSWAMEAEKSA--NAKATPHMKNSLTEEEIRLLKEGVESTPVKDIELGETK 151
++AI GMV+YSWAME EK + AKA +K+SLTEEE LLKEGVE+T KD+ELG TK
Sbjct: 290 IVAIVGMVIYSWAMELEKQSIIAAKALNSVKHSLTEEEFELLKEGVETTQSKDVELGRTK 349
>AT4G09810.1 | Symbols: | transporter-related |
chr4:6175415-6176892 REVERSE
Length = 335
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 8/107 (7%)
Query: 34 LFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSE-LTFKNIMG 92
+FI LSC++A+ N+SQ++CIGRF+AVSFQVLGHMKT+ VL +G+ FD + L I+G
Sbjct: 227 MFITLSCTIAIGTNLSQFICIGRFTAVSFQVLGHMKTILVLVMGFFFFDRDGLNLHVILG 286
Query: 93 MVIAIAGMVVYSWAMEAEKSANAKATPHMKNSLTEEEIRLLKEGVES 139
M+IA+ GM+ Y +A++K K + + R K G S
Sbjct: 287 MIIAVLGMIWYG-------NASSKPGGKEKKNYSLPTTRQQKLGATS 326
>AT4G39390.2 | Symbols: ATNST-KT1, NST-K1 | NST-K1 (NUCLEOTIDE SUGAR
TRANSPORTER-KT 1); nucleotide-sugar transmembrane
transporter | chr4:18316278-18317854 FORWARD
Length = 337
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 34 LFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSE-LTFKNIMG 92
F+ILSCS+AV N+SQ++CIGRF+AVSFQVLGHMKT+ VL LG+ F E L + ++G
Sbjct: 232 FFLILSCSIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLVLGFTFFGKEGLNLQVVLG 291
Query: 93 MVIAIAGMVVYSWAMEAEKSANAKATPHMKNSLTEEE 129
M+IAI GM+ W A K + +T+ +
Sbjct: 292 MLIAILGMI---WYGNASSKPGGKERRSLSIPITKSQ 325
>AT4G39390.1 | Symbols: ATNST-KT1, NST-K1 | NST-K1 (NUCLEOTIDE SUGAR
TRANSPORTER-KT 1); nucleotide-sugar transmembrane
transporter | chr4:18316278-18317854 FORWARD
Length = 337
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 34 LFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSE-LTFKNIMG 92
F+ILSCS+AV N+SQ++CIGRF+AVSFQVLGHMKT+ VL LG+ F E L + ++G
Sbjct: 232 FFLILSCSIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLVLGFTFFGKEGLNLQVVLG 291
Query: 93 MVIAIAGMVVYSWAMEAEKSANAKATPHMKNSLTEEE 129
M+IAI GM+ W A K + +T+ +
Sbjct: 292 MLIAILGMI---WYGNASSKPGGKERRSLSIPITKSQ 325
>AT1G34020.1 | Symbols: | transporter-related |
chr1:12367359-12368965 FORWARD
Length = 335
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Query: 29 NLSLQLFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSE-LTF 87
NL LFI LSC++A+ N+SQ++CIGRF+AVSFQVLGHMKT+ VL +G+ F E L
Sbjct: 222 NLVSVLFITLSCTIAIGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGREGLNL 281
Query: 88 KNIMGMVIAIAGMVVYSWAMEAEKSANAKATPHMKNSLTEEE 129
++GM+IA+ GM+ W A K + T ++
Sbjct: 282 HVVVGMIIAVLGMI---WYGNASSKPGGKERRNYSLPTTRQQ 320
>AT1G06890.2 | Symbols: | transporter-related |
chr1:2111728-2114038 REVERSE
Length = 357
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 65/95 (68%), Gaps = 4/95 (4%)
Query: 34 LFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGM 93
FI+LSC ++V N S +L IG+ S V++QVLGH+KT VL G++L ++NI+G+
Sbjct: 224 FFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGI 283
Query: 94 VIAIAGMVVYSW--AMEAEKSANAKAT--PHMKNS 124
++A+ GMVVYS+ ++E ++ A+ +T P MK S
Sbjct: 284 LVAVIGMVVYSYYCSIETQQKASETSTQLPQMKES 318
>AT1G06890.1 | Symbols: | transporter-related |
chr1:2111728-2114038 REVERSE
Length = 357
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 65/95 (68%), Gaps = 4/95 (4%)
Query: 34 LFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGM 93
FI+LSC ++V N S +L IG+ S V++QVLGH+KT VL G++L ++NI+G+
Sbjct: 224 FFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGI 283
Query: 94 VIAIAGMVVYSW--AMEAEKSANAKAT--PHMKNS 124
++A+ GMVVYS+ ++E ++ A+ +T P MK S
Sbjct: 284 LVAVIGMVVYSYYCSIETQQKASETSTQLPQMKES 318
>AT2G30460.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system, membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF250
(InterPro:IPR004853); BEST Arabidopsis thaliana protein
match is: transporter-related (TAIR:AT1G06890.2). |
chr2:12976449-12978489 REVERSE
Length = 353
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 8/104 (7%)
Query: 34 LFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGM 93
FI+LSC ++V N S +L IG+ S V++QVLGH+KT VL G+LL +++NI+G+
Sbjct: 224 FFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYLLLKDAFSWRNILGI 283
Query: 94 VIAIAGMVVYSW--AMEAEKSANAKAT--PHM----KNSLTEEE 129
++A+ GMV+YS+ +E ++ A +T P M K+ L E
Sbjct: 284 LVAVIGMVLYSYYCTLETQQKATETSTQLPQMDENEKDPLVSAE 327
>AT2G30460.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system, membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF250
(InterPro:IPR004853); BEST Arabidopsis thaliana protein
match is: transporter-related (TAIR:AT1G06890.2); Has
782 Blast hits to 581 proteins in 90 species: Archae -
0; Bacteria - 6; Metazoa - 140; Fungi - 34; Plants -
501; Viruses - 0; Other Eukaryotes - 101 (source: NCBI
BLink). | chr2:12976449-12978489 REVERSE
Length = 353
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 8/104 (7%)
Query: 34 LFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGM 93
FI+LSC ++V N S +L IG+ S V++QVLGH+KT VL G+LL +++NI+G+
Sbjct: 224 FFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYLLLKDAFSWRNILGI 283
Query: 94 VIAIAGMVVYSW--AMEAEKSANAKAT--PHM----KNSLTEEE 129
++A+ GMV+YS+ +E ++ A +T P M K+ L E
Sbjct: 284 LVAVIGMVLYSYYCTLETQQKATETSTQLPQMDENEKDPLVSAE 327
>AT2G28315.1 | Symbols: | LOCATED IN: membrane; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF250
(InterPro:IPR004853); BEST Arabidopsis thaliana protein
match is: transporter-related (TAIR:AT1G06890.2); Has
1852 Blast hits to 1847 proteins in 207 species: Archae
- 0; Bacteria - 58; Metazoa - 582; Fungi - 250; Plants -
685; Viruses - 0; Other Eukaryotes - 277 (source: NCBI
BLink). | chr2:12088896-12090570 FORWARD
Length = 342
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 35 FIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMV 94
FI LSC +AV N S +L IG+ S V++QVLGH+KT VL G+ L T +NI G++
Sbjct: 225 FITLSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLHDPFTPRNIAGIL 284
Query: 95 IAIAGMVVYSWAME-AEKSANAKA 117
IA+ GM++YS+ A KS A +
Sbjct: 285 IAVLGMLLYSYFCSVASKSKQASS 308
>AT5G55950.1 | Symbols: | transporter-related |
chr5:22658411-22660253 REVERSE
Length = 398
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 26 DLVNLSLQLFIILSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSEL 85
DL N S I++S L S L +G SA S VLG KT +L G+++F S+
Sbjct: 265 DLTNSSA---ILISALLGFLLQWSGALALGATSATSHVVLGQFKTCVILLGGYVIFGSDP 321
Query: 86 TFKNIMGMVIAIAGMVVYSWAMEAEKSANAKATPHMKN-SLTEEEIRLLKEGVESTPVKD 144
F +I G + A+ GM VY+W KS + HM N L ++ + + K E+ D
Sbjct: 322 GFISICGAIAALGGMSVYTWLNLPGKSID-----HMSNKQLPKQNVTVSKPKAEA----D 372
Query: 145 IELGET 150
GET
Sbjct: 373 DGGGET 378
>AT1G77610.1 | Symbols: | glucose-6-phosphate/phosphate
translocator-related | chr1:29165489-29167486 FORWARD
Length = 336
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 34 LFIILSCSLAVFC-NVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMG 92
L IILS + FC N S + I +AV+F V G++K + + WL+F + +++ N +G
Sbjct: 226 LIIILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVMVSWLIFRNPISYMNAVG 285
Query: 93 MVIAIAGMVVYSWA--MEAEKSANAKATPHMKNSLTE 127
I + G Y + M ++++ TP S E
Sbjct: 286 CGITLVGCTFYGYVRHMLSQQTPGTPRTPRTPRSKME 322