Jatropha Genome Database

JcCB0459841.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0459841.20 + phase: 0 /partial
         (106 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G27240.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    60   2e-10
AT3G04980.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    60   3e-10
AT3G06340.2 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    59   5e-10
AT3G06340.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    59   5e-10
AT2G25560.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    58   1e-09
AT4G19590.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    56   6e-09
AT4G19580.1 | Symbols:  | heat shock protein binding | chr4:1066...    54   2e-08
AT5G53150.1 | Symbols:  | heat shock protein binding / unfolded ...    53   3e-08
AT2G05230.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    48   1e-06
AT2G05250.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    48   1e-06

>AT5G27240.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr5:9597552-9600866 FORWARD
          Length = 1104

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)

Query: 14  IAKEKIISIDYVGARKKLLEIQFHFPAFDNISGMITVCDILNSAGYRFLGSNTNYYWVLE 73
           +A++K+   D+VGA+K LL+ Q  F   +++  M+ VCD+ NSA  + +    N+Y +L+
Sbjct: 14  LAEDKMKEGDFVGAQKLLLKAQSLFSGLESLPQMLAVCDVHNSA-EKKINCLENWYGILQ 72

Query: 74  VCPDATEFAMKTQYNKFLTLLEPIKNNFPKA 104
           V   A +  +K Q  K   LL P KN FP A
Sbjct: 73  VMHFADDATIKKQVRKLALLLHPDKNQFPGA 103


>AT3G04980.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr3:1378684-1382181 REVERSE
          Length = 1165

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 23  DYVGARKKLLEIQFHFPAFDNISGMITVCDILNSAGYRFLGSNTNYYWVLEVCPDATEFA 82
           D+VGA K + + Q  FP  +NI  M+T+CD+ +SA  +  G + ++Y VL+V P A    
Sbjct: 5   DFVGAHKFVTKAQRLFPNLENIVQMMTICDVHSSAIKKIKGLD-DWYGVLQVQPYADADT 63

Query: 83  MKTQYNKFLTLLEPIKNNFPKA 104
           +K QY K   LL P KN F  A
Sbjct: 64  IKKQYRKLALLLHPDKNKFAGA 85


>AT3G06340.2 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr3:1920607-1922628 REVERSE
          Length = 673

 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%)

Query: 13  EIAKEKIISIDYVGARKKLLEIQFHFPAFDNISGMITVCDILNSAGYRFLGSNTNYYWVL 72
           ++A+  +   D+  ARK  ++ Q    + +NIS MI VCD+  +A  +  G+  ++Y +L
Sbjct: 13  DLAEGLMKKTDFTAARKLAMKAQKMDSSLENISRMIMVCDVHCAATEKLFGTEMDWYGIL 72

Query: 73  EVCPDATEFAMKTQYNKFLTLLEPIKNNFPKAAS 106
           +V   A +  +K QY +   LL P KN  P A S
Sbjct: 73  QVEQIANDVIIKKQYKRLALLLHPDKNKLPGAES 106


>AT3G06340.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr3:1920607-1922628 REVERSE
          Length = 673

 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%)

Query: 13  EIAKEKIISIDYVGARKKLLEIQFHFPAFDNISGMITVCDILNSAGYRFLGSNTNYYWVL 72
           ++A+  +   D+  ARK  ++ Q    + +NIS MI VCD+  +A  +  G+  ++Y +L
Sbjct: 13  DLAEGLMKKTDFTAARKLAMKAQKMDSSLENISRMIMVCDVHCAATEKLFGTEMDWYGIL 72

Query: 73  EVCPDATEFAMKTQYNKFLTLLEPIKNNFPKAAS 106
           +V   A +  +K QY +   LL P KN  P A S
Sbjct: 73  QVEQIANDVIIKKQYKRLALLLHPDKNKLPGAES 106


>AT2G25560.1 | Symbols:  | DNAJ heat shock N-terminal
          domain-containing protein | chr2:10881790-10883760
          FORWARD
          Length = 656

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 13 EIAKEKIISIDYVGARKKLLEIQFHFPAFDNISGMITVCDILNSAGYRFLGSNTNYYWVL 72
          EIAK K ++ D+ GARK  L+ QF +P  D I+ M+   D+  SA     G + ++Y VL
Sbjct: 13 EIAKRKFLANDFAGARKFALKAQFLYPELDGIAQMVATFDVHLSAQNIIYG-DVDHYGVL 71

Query: 73 EVCPDATEFAMKTQYNKFLTLLEPIKN 99
           + P+A +  ++ +Y K   +L P +N
Sbjct: 72 GLNPEADDEIVRKRYRKLAVMLHPDRN 98


>AT4G19590.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr4:10671199-10672290
           FORWARD
          Length = 345

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/89 (34%), Positives = 48/89 (53%)

Query: 12  VEIAKEKIISIDYVGARKKLLEIQFHFPAFDNISGMITVCDILNSAGYRFLGSNTNYYWV 71
           ++IAK K+   DY GA+    + Q  +P  D +  ++ + D+  SAG    G  +++Y +
Sbjct: 1   MDIAKRKVAENDYNGAKLFANKAQDLYPKLDGLRQVMMLIDVYISAGNTISGGESDWYGI 60

Query: 72  LEVCPDATEFAMKTQYNKFLTLLEPIKNN 100
           L V P A E  +K QY +   LL P KNN
Sbjct: 61  LGVDPLADEEVVKKQYKRLALLLHPDKNN 89


>AT4G19580.1 | Symbols:  | heat shock protein binding |
           chr4:10668400-10669452 FORWARD
          Length = 301

 Score = 53.5 bits (127), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 12  VEIAKEKIISIDYVGARKKLLEIQFHFPAFDNISGMITVCDILNSAGYRFLGSNTNYYWV 71
           ++IA++K+   DY GA+  + + Q  +P  D +  ++ + D+  SA  +  G   ++Y +
Sbjct: 1   MDIAEKKLSKNDYDGAKTFISKAQALYPKLDGLEQVVMMIDVYISASNKINGE-ADWYGI 59

Query: 72  LEVCPDATEFAMKTQYNKFLTLLEPIKNNF 101
           L + P A E A+K QY K   LL P KN F
Sbjct: 60  LGIDPLADEEAVKKQYKKLALLLHPDKNRF 89


>AT5G53150.1 | Symbols:  | heat shock protein binding / unfolded
          protein binding | chr5:21554935-21557202 FORWARD
          Length = 726

 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 12 VEIAKEKIISIDYVGARKKLLEIQFHFPAFDNISGMITVCDILNSAGYRFLGSNTNYYWV 71
          ++IA+ K+   DY GA+K   + Q  FP  D +  +    ++  S    F G   ++Y V
Sbjct: 12 MDIAERKMTEKDYTGAKKFANKAQNLFPELDGLKQLFVAINVYISGEKTFAGE-ADWYGV 70

Query: 72 LEVCPDATEFAMKTQYNKFLTLLEPIKN 99
          L V P A++ A+K QY K + +L P KN
Sbjct: 71 LGVDPFASDEALKKQYRKLVLMLHPDKN 98


>AT2G05230.1 | Symbols:  | DNAJ heat shock N-terminal
          domain-containing protein | chr2:1899818-1901938
          REVERSE
          Length = 706

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 13 EIAKEKIISIDYVGARKKLLEIQFHFPAFDNISGMITVCDILNSAGYRFLGSNTNYYWVL 72
          +IA+ +    D+  AR   L+ +  FP  + +S M+   ++  ++  R  G   +YY VL
Sbjct: 13 QIAERRFAEKDFTSARSYALKAKSLFPDLEGLSQMVATFEVYLASQTR-SGGQIDYYAVL 71

Query: 73 EVCPDATEFAMKTQYNKFLTLLEPIKN 99
           + P A +  +K QY K   LL P KN
Sbjct: 72 GLKPSAGKREVKKQYKKMAVLLHPDKN 98


>AT2G05250.1 | Symbols:  | DNAJ heat shock N-terminal
          domain-containing protein | chr2:1913645-1915765
          REVERSE
          Length = 706

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 13 EIAKEKIISIDYVGARKKLLEIQFHFPAFDNISGMITVCDILNSAGYRFLGSNTNYYWVL 72
          +IA+ +    D+  AR   L+ +  FP  + +S M+   ++  ++  R  G   +YY VL
Sbjct: 13 QIAERRFAEKDFTSARSYALKAKSLFPDLEGLSQMVATFEVYLASQTR-SGGQIDYYAVL 71

Query: 73 EVCPDATEFAMKTQYNKFLTLLEPIKN 99
           + P A +  +K QY K   LL P KN
Sbjct: 72 GLKPSAGKREVKKQYKKMAVLLHPDKN 98