Jatropha Genome Database

JcCB0459841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0459841.10 - phase: 0 
         (182 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08660.1 | Symbols:  | glycosyl transferase family 29 protein...   223   4e-59
AT1G08660.2 | Symbols:  | glycosyl transferase family 29 protein...   223   7e-59
AT3G48820.1 | Symbols:  | glycosyl transferase family 29 protein...   102   1e-22
AT3G48820.2 | Symbols:  | glycosyl transferase family 29 protein...    99   2e-21

>AT1G08660.1 | Symbols:  | glycosyl transferase family 29 protein /
           sialyltransferase family protein | chr1:2757116-2759677
           REVERSE
          Length = 474

 Score =  223 bits (568), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 108/156 (69%), Positives = 122/156 (78%), Gaps = 5/156 (3%)

Query: 7   SNNSRRPAAVLHLLCVAAFFSIIVFAIQSSFFA-GNRNSDLNKEEIHTLSEFQFSVQQCV 65
           S+ + R   +L LL   A FS+ VF IQSSFFA  NR  DL  E+I  LS+FQ SVQQCV
Sbjct: 3   SHQAGRKLPLLQLLGCVAVFSVFVFTIQSSFFADNNRKLDLQPEDIQILSDFQSSVQQCV 62

Query: 66  ANRGLGLTAHIVDHCKLTLKFPEGTNSTWYNAQFKIYEPLEYHYDVCDAILLWEQYRNMT 125
           ANRGLGL+AHI+DHC L LKFPEGTNSTWYNAQFK++E LE+ Y+VC+A+LLWEQYRNMT
Sbjct: 63  ANRGLGLSAHIIDHCNLILKFPEGTNSTWYNAQFKVFEALEFKYNVCEAVLLWEQYRNMT 122

Query: 126 TVLTREYLDARPDGWLDYAAKRIAQLYDVCGTFSCY 161
           TVLTREYLD RPDGWLDYAA RIAQL    G   CY
Sbjct: 123 TVLTREYLDVRPDGWLDYAAMRIAQL----GADKCY 154


>AT1G08660.2 | Symbols:  | glycosyl transferase family 29 protein /
           sialyltransferase family protein | chr1:2757584-2759677
           REVERSE
          Length = 347

 Score =  223 bits (567), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 108/156 (69%), Positives = 122/156 (78%), Gaps = 5/156 (3%)

Query: 7   SNNSRRPAAVLHLLCVAAFFSIIVFAIQSSFFA-GNRNSDLNKEEIHTLSEFQFSVQQCV 65
           S+ + R   +L LL   A FS+ VF IQSSFFA  NR  DL  E+I  LS+FQ SVQQCV
Sbjct: 3   SHQAGRKLPLLQLLGCVAVFSVFVFTIQSSFFADNNRKLDLQPEDIQILSDFQSSVQQCV 62

Query: 66  ANRGLGLTAHIVDHCKLTLKFPEGTNSTWYNAQFKIYEPLEYHYDVCDAILLWEQYRNMT 125
           ANRGLGL+AHI+DHC L LKFPEGTNSTWYNAQFK++E LE+ Y+VC+A+LLWEQYRNMT
Sbjct: 63  ANRGLGLSAHIIDHCNLILKFPEGTNSTWYNAQFKVFEALEFKYNVCEAVLLWEQYRNMT 122

Query: 126 TVLTREYLDARPDGWLDYAAKRIAQLYDVCGTFSCY 161
           TVLTREYLD RPDGWLDYAA RIAQL    G   CY
Sbjct: 123 TVLTREYLDVRPDGWLDYAAMRIAQL----GADKCY 154


>AT3G48820.1 | Symbols:  | glycosyl transferase family 29 protein /
           sialyltransferase family protein |
           chr3:18100106-18102852 REVERSE
          Length = 440

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 5/127 (3%)

Query: 24  AFFSIIVFAIQ-SSFFAGNRNSDLNKEEIHTLSEFQFSVQQCVANRGLGLTAHIV-DHCK 81
              +++++ I  S+ +  NR      E++  L   Q   Q+CV+  GLGL A +  D+CK
Sbjct: 15  GISAVLIYIIGVSNLYESNR---FTNEDLEALQSLQNGFQKCVSANGLGLQAAMGRDYCK 71

Query: 82  LTLKFPEGTNSTWYNAQFKIYEPLEYHYDVCDAILLWEQYRNMTTVLTREYLDARPDGWL 141
           +++ FP+ T   W + +    E L Y +D+C+A+  WEQ RN +T+LT+EY+DA P+GW 
Sbjct: 72  VSINFPKDTVPKWKDPKSGELEGLSYEFDLCEAVATWEQVRNSSTILTKEYIDALPNGWE 131

Query: 142 DYAAKRI 148
           DYA +RI
Sbjct: 132 DYAWRRI 138


>AT3G48820.2 | Symbols:  | glycosyl transferase family 29 protein /
           sialyltransferase family protein |
           chr3:18100106-18102852 REVERSE
          Length = 431

 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 1/99 (1%)

Query: 51  IHTLSEFQFSVQQCVANRGLGLTAHIV-DHCKLTLKFPEGTNSTWYNAQFKIYEPLEYHY 109
           +  L   Q   Q+CV+  GLGL A +  D+CK+++ FP+ T   W + +    E L Y +
Sbjct: 31  LEALQSLQNGFQKCVSANGLGLQAAMGRDYCKVSINFPKDTVPKWKDPKSGELEGLSYEF 90

Query: 110 DVCDAILLWEQYRNMTTVLTREYLDARPDGWLDYAAKRI 148
           D+C+A+  WEQ RN +T+LT+EY+DA P+GW DYA +RI
Sbjct: 91  DLCEAVATWEQVRNSSTILTKEYIDALPNGWEDYAWRRI 129