Jatropha Genome Database

JcCB0459051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0459051.10 + phase: 0 
         (178 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G73390.3 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   188   2e-48
AT1G73390.2 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   188   2e-48
AT1G73390.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   188   2e-48
AT1G73390.4 | Symbols:  | unknown protein | chr1:27591486-275941...   187   2e-48
AT1G17940.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   176   5e-45
AT5G14020.1 | Symbols:  | INVOLVED IN: N-terminal protein myrist...    57   9e-09

>AT1G73390.3 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           LOCATED IN: cellular_component unknown; EXPRESSED IN: 24
           plant structures; EXPRESSED DURING: 13 growth stages;
           CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328);
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95
           proteins in 25 species: Archae - 0; Bacteria - 0;
           Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0;
           Other Eukaryotes - 0 (source: NCBI BLink). |
           chr1:27591079-27594148 REVERSE
          Length = 419

 Score =  188 bits (477), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/173 (52%), Positives = 119/173 (68%), Gaps = 1/173 (0%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC +S   D+GGN + P ++G+V+++VPG+RIPKPV+F+Q LGD L + L+ERL+ALRT
Sbjct: 1   MGCFASRPNDTGGNRRKPTSIGDVSVYVPGLRIPKPVEFSQSLGDQLPKTLVERLTALRT 60

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           RIVVMA QE            QHGGST+ DL  ALEDY+PVLLGL ++G+ LQ ++QF+W
Sbjct: 61  RIVVMANQEGPTITRTRRKT-QHGGSTLADLHHALEDYIPVLLGLTKDGSHLQFKVQFNW 119

Query: 121 LNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXXXITSNDGHLSKLSE 173
           +NQED  EET MSN WYE+LSVLH                  S+DG+  K+SE
Sbjct: 120 VNQEDEEEETAMSNVWYEILSVLHLMAMLQMSQANLLLLPRGSSDGYHPKISE 172


>AT1G73390.2 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           LOCATED IN: cellular_component unknown; EXPRESSED IN: 24
           plant structures; EXPRESSED DURING: 13 growth stages;
           CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328);
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95
           proteins in 25 species: Archae - 0; Bacteria - 0;
           Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0;
           Other Eukaryotes - 0 (source: NCBI BLink). |
           chr1:27591079-27594148 REVERSE
          Length = 419

 Score =  188 bits (477), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/173 (52%), Positives = 119/173 (68%), Gaps = 1/173 (0%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC +S   D+GGN + P ++G+V+++VPG+RIPKPV+F+Q LGD L + L+ERL+ALRT
Sbjct: 1   MGCFASRPNDTGGNRRKPTSIGDVSVYVPGLRIPKPVEFSQSLGDQLPKTLVERLTALRT 60

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           RIVVMA QE            QHGGST+ DL  ALEDY+PVLLGL ++G+ LQ ++QF+W
Sbjct: 61  RIVVMANQEGPTITRTRRKT-QHGGSTLADLHHALEDYIPVLLGLTKDGSHLQFKVQFNW 119

Query: 121 LNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXXXITSNDGHLSKLSE 173
           +NQED  EET MSN WYE+LSVLH                  S+DG+  K+SE
Sbjct: 120 VNQEDEEEETAMSNVWYEILSVLHLMAMLQMSQANLLLLPRGSSDGYHPKISE 172


>AT1G73390.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: N-terminal protein myristoylation; LOCATED
           IN: cellular_component unknown; EXPRESSED IN: 24 plant
           structures; EXPRESSED DURING: 13 growth stages; CONTAINS
           InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST
           Arabidopsis thaliana protein match is: unknown protein
           (TAIR:AT1G17940.1); Has 95 Blast hits to 95 proteins in
           25 species: Archae - 0; Bacteria - 0; Metazoa - 19;
           Fungi - 23; Plants - 53; Viruses - 0; Other Eukaryotes -
           0 (source: NCBI BLink). | chr1:27591079-27594148 REVERSE
          Length = 419

 Score =  188 bits (477), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/173 (52%), Positives = 119/173 (68%), Gaps = 1/173 (0%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC +S   D+GGN + P ++G+V+++VPG+RIPKPV+F+Q LGD L + L+ERL+ALRT
Sbjct: 1   MGCFASRPNDTGGNRRKPTSIGDVSVYVPGLRIPKPVEFSQSLGDQLPKTLVERLTALRT 60

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           RIVVMA QE            QHGGST+ DL  ALEDY+PVLLGL ++G+ LQ ++QF+W
Sbjct: 61  RIVVMANQEGPTITRTRRKT-QHGGSTLADLHHALEDYIPVLLGLTKDGSHLQFKVQFNW 119

Query: 121 LNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXXXITSNDGHLSKLSE 173
           +NQED  EET MSN WYE+LSVLH                  S+DG+  K+SE
Sbjct: 120 VNQEDEEEETAMSNVWYEILSVLHLMAMLQMSQANLLLLPRGSSDGYHPKISE 172


>AT1G73390.4 | Symbols:  | unknown protein | chr1:27591486-27594148
           REVERSE
          Length = 342

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/173 (52%), Positives = 119/173 (68%), Gaps = 1/173 (0%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC +S   D+GGN + P ++G+V+++VPG+RIPKPV+F+Q LGD L + L+ERL+ALRT
Sbjct: 1   MGCFASRPNDTGGNRRKPTSIGDVSVYVPGLRIPKPVEFSQSLGDQLPKTLVERLTALRT 60

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           RIVVMA QE            QHGGST+ DL  ALEDY+PVLLGL ++G+ LQ ++QF+W
Sbjct: 61  RIVVMANQEGPTITRTRRKT-QHGGSTLADLHHALEDYIPVLLGLTKDGSHLQFKVQFNW 119

Query: 121 LNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXXXITSNDGHLSKLSE 173
           +NQED  EET MSN WYE+LSVLH                  S+DG+  K+SE
Sbjct: 120 VNQEDEEEETAMSNVWYEILSVLHLMAMLQMSQANLLLLPRGSSDGYHPKISE 172


>AT1G17940.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: N-terminal protein myristoylation; LOCATED
           IN: cellular_component unknown; CONTAINS InterPro
           DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G73390.3); Has 75 Blast hits to 75 proteins in
           21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 22; Plants - 53; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr1:6169621-6172035 REVERSE
          Length = 405

 Score =  176 bits (447), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 1/167 (0%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC +ST +DSGGN + P ++GEV+++VPG+RIP+ VDF Q LGD L + L+ERL+ALRT
Sbjct: 1   MGCFASTPKDSGGNRRKPTSIGEVSVYVPGLRIPRAVDFLQSLGDQLPKTLVERLTALRT 60

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           RIVVMA QE            QHGGST+LDL QAL DYLPV+LGL ++G+ LQ ++QF+W
Sbjct: 61  RIVVMANQEGPTITRTRRKT-QHGGSTLLDLHQALLDYLPVVLGLTKDGSHLQFKVQFNW 119

Query: 121 LNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXXXITSNDGH 167
           +NQED  EET MSN WYE+LSVLH                  S+DGH
Sbjct: 120 VNQEDEEEETEMSNVWYEVLSVLHLMAMLQMSQANLLLLPRGSSDGH 166


>AT5G14020.1 | Symbols:  | INVOLVED IN: N-terminal protein
           myristoylation; LOCATED IN: vacuole; EXPRESSED IN: root;
           CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328);
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT1G73390.3); Has 53 Blast hits to 53
           proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr5:4523730-4525819 REVERSE
          Length = 401

 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 17/146 (11%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC  ST    G   K  R + E  +FV   R+P   D  + L     +  I RL+ LR 
Sbjct: 1   MGCAQSTIAVVGRKNK-KRIIQESVVFVLQFRVPVQSDLQRQLKGVSPKTTINRLTCLRN 59

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQ-LQQELQFS 119
           +I ++A                 GGS + +L+ ALE+YL +L GL++     ++  ++  
Sbjct: 60  QIELVA--------------EDTGGSAISELRTALEEYLSLLSGLIKKSKDGMEGCVELK 105

Query: 120 WLNQED-TAEETTMSNFWYELLSVLH 144
           W    D    E   +N W E+L V+H
Sbjct: 106 WRTLGDGRRAEICCTNLWMEMLIVIH 131