Jatropha Genome Database

JcCB0458291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0458291.10 + phase: 1 /partial
         (160 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67500.1 | Symbols: VDAC2, ATVDAC2 | VDAC2 (VOLTAGE DEPENDENT...   181   2e-46
AT3G49920.1 | Symbols: VDAC5, ATVDAC5 | VDAC5 (VOLTAGE DEPENDENT...   137   3e-33
AT5G15090.1 | Symbols: VDAC3, ATVDAC3 | VDAC3 (VOLTAGE DEPENDENT...   135   1e-32
AT5G57490.1 | Symbols: VDAC4, ATVDAC4 | VDAC4 (VOLTAGE DEPENDENT...   129   1e-30
AT3G01280.1 | Symbols: VDAC1, ATVDAC1 | VDAC1 (VOLTAGE DEPENDENT...   127   2e-30
AT5G37610.1 | Symbols:  | voltage-gated anion channel | chr5:149...    54   3e-08

>AT5G67500.1 | Symbols: VDAC2, ATVDAC2 | VDAC2 (VOLTAGE DEPENDENT
           ANION CHANNEL 2); voltage-gated anion channel |
           chr5:26935223-26937123 FORWARD
          Length = 276

 Score =  181 bits (459), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 108/149 (72%)

Query: 12  IVDFSATIGTPTIAFGAETSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSIKVSYL 71
           ++D +AT+G+P I+FGAE  Y T S  F+KYNAG+S T PD   S+IL DKG+S+K SYL
Sbjct: 128 LIDITATLGSPVISFGAEAGYDTTSKTFTKYNAGISVTKPDACLSIILGDKGDSLKASYL 187

Query: 72  RHLEMMNQLTVVGEINRTFSNNENTLTVGCSYVADPQTVLKTKLNNHGSLGALVQHEFKP 131
            H +   +   VGE+ R FS NENT+TVG  Y  D  T +K KLNNHG+LGAL+QHE  P
Sbjct: 188 HHFDEFKRTAAVGEVYRKFSTNENTITVGGLYAIDHSTAVKAKLNNHGTLGALLQHEVLP 247

Query: 132 KSFLTISGSFDTKALHKNPKFGLALSLKP 160
           +S +T+S   DTKAL K+P+FGL+L+LKP
Sbjct: 248 RSLVTVSSEIDTKALEKHPRFGLSLALKP 276


>AT3G49920.1 | Symbols: VDAC5, ATVDAC5 | VDAC5 (VOLTAGE DEPENDENT
           ANION CHANNEL 5); voltage-gated anion channel |
           chr3:18505836-18507699 REVERSE
          Length = 226

 Score =  137 bits (345), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/131 (54%), Positives = 87/131 (66%)

Query: 30  TSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSIKVSYLRHLEMMNQLTVVGEINRT 89
           T Y T S  F+KYN GVS T PD   S+IL DKG+SIK SY+ +L+   +   VGE+ R 
Sbjct: 96  TGYDTTSRTFTKYNVGVSVTKPDQCVSIILGDKGDSIKASYVYYLDESTRSATVGEVIRK 155

Query: 90  FSNNENTLTVGCSYVADPQTVLKTKLNNHGSLGALVQHEFKPKSFLTISGSFDTKALHKN 149
            S NE T+TVG  Y  D  T +K KLN++G  GAL+QHE  PKS +TISG  DTK L K 
Sbjct: 156 ISTNETTVTVGGLYAVDHLTNVKAKLNSNGKFGALLQHEGLPKSIVTISGEIDTKTLDKY 215

Query: 150 PKFGLALSLKP 160
           P+ GL+LSLKP
Sbjct: 216 PRLGLSLSLKP 226


>AT5G15090.1 | Symbols: VDAC3, ATVDAC3 | VDAC3 (VOLTAGE DEPENDENT
           ANION CHANNEL 3); voltage-gated anion channel |
           chr5:4889641-4891389 REVERSE
          Length = 274

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 99/150 (66%), Gaps = 4/150 (2%)

Query: 12  IVDFSATIGTPTIAFGAETSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSIKVSYL 71
           IV+FS  +GT  ++ G + +Y T SG F  +NAG ++T  D  AS+IL DKG  +  SY 
Sbjct: 128 IVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYY 187

Query: 72  RHLEMMNQLTVVG-EINRTFSNNENTLTVGCSYVADPQTVLKTKLNNHGSLGALVQHEFK 130
              ++++  TVVG EI+  F+  EN +TVG  +  DP T +K ++NN G   AL+QHE++
Sbjct: 188 ---QIVSPSTVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWR 244

Query: 131 PKSFLTISGSFDTKALHKNPKFGLALSLKP 160
           PKSF T+SG  D+KA+ K+ K G+AL+LKP
Sbjct: 245 PKSFFTVSGEVDSKAIDKSAKVGIALALKP 274


>AT5G57490.1 | Symbols: VDAC4, ATVDAC4 | VDAC4 (VOLTAGE DEPENDENT
           ANION CHANNEL 4); voltage-gated anion channel |
           chr5:23283895-23285335 REVERSE
          Length = 274

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 98/150 (65%), Gaps = 4/150 (2%)

Query: 12  IVDFSATIGTPTIAFGAETSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSIKVSYL 71
           ++D SATIG+  +  G E S+ TAS   +KYNAG+ + +   +A++IL DKG S++ +Y+
Sbjct: 128 LLDLSATIGSQNVCLGGEVSFDTASSSLTKYNAGIGFNNQGVSAALILEDKGESLRATYV 187

Query: 72  RHLEMMNQLTVVG-EINRTFSNNENTLTVGCSYVADPQTVLKTKLNNHGSLGALVQHEFK 130
                +N  T  G E+ R FSN  N+ TVG S+  D  TV+KT+ +N G  G +VQ E++
Sbjct: 188 ---HTVNPTTSFGAELIRRFSNYNNSFTVGSSHSVDQFTVVKTRFSNSGKAGMVVQREWR 244

Query: 131 PKSFLTISGSFDTKALHKNPKFGLALSLKP 160
           PKS +T S  +D+KA+  +PK GLAL+LKP
Sbjct: 245 PKSHITFSAEYDSKAVTSSPKLGLALALKP 274


>AT3G01280.1 | Symbols: VDAC1, ATVDAC1 | VDAC1 (VOLTAGE DEPENDENT
           ANION CHANNEL 1); voltage-gated anion channel |
           chr3:85754-87612 FORWARD
          Length = 276

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 96/148 (64%)

Query: 13  VDFSATIGTPTIAFGAETSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSIKVSYLR 72
           V+FS  IG+  +A G + S+ T SG F+K NAG+S+T  D  AS+ + DKG+ +  SY  
Sbjct: 129 VNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYH 188

Query: 73  HLEMMNQLTVVGEINRTFSNNENTLTVGCSYVADPQTVLKTKLNNHGSLGALVQHEFKPK 132
            +  +    V  E++   S+ ++T+TVG  +  DP T +K ++N+ G   AL+QHE+KPK
Sbjct: 189 IVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPK 248

Query: 133 SFLTISGSFDTKALHKNPKFGLALSLKP 160
           SF TISG  DTK++ K+ K GLAL+LKP
Sbjct: 249 SFFTISGEVDTKSIDKSAKVGLALALKP 276


>AT5G37610.1 | Symbols:  | voltage-gated anion channel |
           chr5:14938121-14938612 FORWARD
          Length = 163

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 12  IVDFSATIGTPTIAFGAETSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSIKVSYL 71
           I+ FSA  G     FG E +    +   +K N  +S  + DT  +  +  K +    SY 
Sbjct: 19  ILSFSAVFGNDFWRFGFELTLDLVNRIITKANTVLSLITEDTTTTFSIDKKASLFTASYY 78

Query: 72  RHLEMMNQLTVVG-EINRTFSNNENTLTVGCSYVADPQTVLKTKL--NNHGSLGALVQHE 128
           + L   +  TV G E     S+  N+ ++G  ++     +++  L  +N GS+  L QH 
Sbjct: 79  QRL---HSKTVCGAEAKYILSDKSNSFSIGKRHLFGDDDLIQALLSVSNGGSMRVLFQHH 135

Query: 129 FKPKSFLTISGSFDTKAL-HKNPKFGLALSL 158
           +  KSF TI+G    + L H + +FGLA+ L
Sbjct: 136 WTLKSFFTIAGE---RLLNHSSQRFGLAVEL 163