Jatropha Genome Database

JcCB0456881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0456881.10 - phase: 0 /partial
         (148 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60880.2 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synth...   265   9e-72
AT3G60880.1 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synth...   265   9e-72
AT2G45440.1 | Symbols: DHDPS2 | DHDPS2 (DIHYDRODIPICOLINATE SYNT...   259   6e-70

>AT3G60880.2 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synthase
           1 (DHDPS1) (DHDPS) (DHPS1) | chr3:22495086-22496542
           FORWARD
          Length = 365

 Score =  265 bits (676), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 121/148 (81%), Positives = 139/148 (93%)

Query: 1   LAGVKECMGNDRVEQYTEKGIVVWSGNDDECHDARWSHGATGVISVASNLVPGLMRKLMI 60
           +AGVKEC+GN+RVE+YTEKGIVVWSGNDD+CHD+RW HGATGVISV SNLVPGLMRKLM 
Sbjct: 218 MAGVKECVGNNRVEEYTEKGIVVWSGNDDQCHDSRWDHGATGVISVTSNLVPGLMRKLMF 277

Query: 61  EGKDPALNSKLLPLIRWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLPKRVEFVNLV 120
           EG++ ALN+KLLPL+ WLFQEPNPIG+NTALAQLGV RPVFRLPYVPLPL KR+EFV LV
Sbjct: 278 EGRNSALNAKLLPLMDWLFQEPNPIGVNTALAQLGVARPVFRLPYVPLPLSKRIEFVKLV 337

Query: 121 KAIGRENFVGEQDVQVLEDDDFMLVGRY 148
           K IGRE+FVG++DVQVL+DDDF+L+GRY
Sbjct: 338 KEIGREHFVGDRDVQVLDDDDFILIGRY 365


>AT3G60880.1 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synthase
           1 (DHDPS1) (DHDPS) (DHPS1) | chr3:22495086-22496542
           FORWARD
          Length = 364

 Score =  265 bits (676), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 121/148 (81%), Positives = 139/148 (93%)

Query: 1   LAGVKECMGNDRVEQYTEKGIVVWSGNDDECHDARWSHGATGVISVASNLVPGLMRKLMI 60
           +AGVKEC+GN+RVE+YTEKGIVVWSGNDD+CHD+RW HGATGVISV SNLVPGLMRKLM 
Sbjct: 217 MAGVKECVGNNRVEEYTEKGIVVWSGNDDQCHDSRWDHGATGVISVTSNLVPGLMRKLMF 276

Query: 61  EGKDPALNSKLLPLIRWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLPKRVEFVNLV 120
           EG++ ALN+KLLPL+ WLFQEPNPIG+NTALAQLGV RPVFRLPYVPLPL KR+EFV LV
Sbjct: 277 EGRNSALNAKLLPLMDWLFQEPNPIGVNTALAQLGVARPVFRLPYVPLPLSKRIEFVKLV 336

Query: 121 KAIGRENFVGEQDVQVLEDDDFMLVGRY 148
           K IGRE+FVG++DVQVL+DDDF+L+GRY
Sbjct: 337 KEIGREHFVGDRDVQVLDDDDFILIGRY 364


>AT2G45440.1 | Symbols: DHDPS2 | DHDPS2 (DIHYDRODIPICOLINATE
           SYNTHASE); catalytic/ dihydrodipicolinate synthase/
           lyase | chr2:18731294-18732867 FORWARD
          Length = 365

 Score =  259 bits (661), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 119/148 (80%), Positives = 135/148 (91%)

Query: 1   LAGVKECMGNDRVEQYTEKGIVVWSGNDDECHDARWSHGATGVISVASNLVPGLMRKLMI 60
           LAGVKEC+GN RVE+YTE G+VVWSGNDDECHD+RW +GATGVISV SNLVPGLMRKLM 
Sbjct: 218 LAGVKECVGNKRVEEYTENGVVVWSGNDDECHDSRWDYGATGVISVTSNLVPGLMRKLMF 277

Query: 61  EGKDPALNSKLLPLIRWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLPKRVEFVNLV 120
           EG++ +LNSKLLPL+ WLF EPNPIG+NTALAQLGV RPVFRLPYVPLPL KR+EFV LV
Sbjct: 278 EGRNSSLNSKLLPLMAWLFHEPNPIGINTALAQLGVSRPVFRLPYVPLPLSKRLEFVKLV 337

Query: 121 KAIGRENFVGEQDVQVLEDDDFMLVGRY 148
           K IGRE+FVGE+DVQ L+DDDF+L+GRY
Sbjct: 338 KEIGREHFVGEKDVQALDDDDFILIGRY 365