Jatropha Genome Database
- JcCB0455931.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0455931.10 - phase: 0
(94 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G58520.1 | Symbols: RXW8 | unknown protein | chr1:21733543-21... 126 2e-30
AT1G10090.1 | Symbols: | unknown protein | chr1:3290572-3295271... 125 6e-30
AT1G69450.1 | Symbols: | LOCATED IN: endomembrane system, membr... 95 8e-21
AT1G58520.2 | Symbols: RXW8 | hydrolase, acting on ester bonds /... 89 8e-19
AT3G01100.1 | Symbols: HYP1, ATHYP1 | HYP1 (HYPOTHETICAL PROTEIN... 89 8e-19
AT3G01100.2 | Symbols: HYP1, ATHYP1 | HYP1 (HYPOTHETICAL PROTEIN... 89 8e-19
AT3G54510.2 | Symbols: | early-responsive to dehydration protei... 77 2e-15
>AT1G58520.1 | Symbols: RXW8 | unknown protein |
chr1:21733543-21738165 FORWARD
Length = 746
Score = 126 bits (317), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 73/94 (77%)
Query: 1 MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
M+I ALLTSAGINI++CI+L SLYSILRKQP+N VYFGRRL R D F +RFVP
Sbjct: 1 MEISALLTSAGINISICIVLLSLYSILRKQPANYCVYFGRRLVCGGARRYDPFWYERFVP 60
Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
SPSW+ KAWET+E+E+LA GLDA+ F RM+ F
Sbjct: 61 SPSWLVKAWETSEDELLAAAGLDAVVFLRMVIFS 94
>AT1G10090.1 | Symbols: | unknown protein | chr1:3290572-3295271
REVERSE
Length = 762
Score = 125 bits (313), Expect = 6e-30, Method: Composition-based stats.
Identities = 59/91 (64%), Positives = 73/91 (80%)
Query: 1 MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
MD+ ALLTSAGINIA+C++L SLYSILRKQP+N VYFGR L+ R++ +D +RF P
Sbjct: 1 MDVSALLTSAGINIAICVVLVSLYSILRKQPANYCVYFGRLLSDGRVKRHDPRWYERFAP 60
Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRML 91
SPSW+ KAWETTEEE+LA GLDA+ F RM+
Sbjct: 61 SPSWLVKAWETTEEEMLAAAGLDAVVFIRMV 91
>AT1G69450.1 | Symbols: | LOCATED IN: endomembrane system,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF221
(InterPro:IPR003864); BEST Arabidopsis thaliana protein
match is: HYP1 (HYPOTHETICAL PROTEIN 1)
(TAIR:AT3G01100.1); Has 911 Blast hits to 825 proteins
in 137 species: Archae - 0; Bacteria - 0; Metazoa -
152; Fungi - 442; Plants - 243; Viruses - 0; Other
Eukaryotes - 74 (source: NCBI BLink). |
chr1:26107120-26110006 REVERSE
Length = 711
Score = 95.1 bits (235), Expect = 8e-21, Method: Composition-based stats.
Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Query: 1 MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLAS---VRIRNNDFFSIDR 57
M + ALL S GIN LC+LLF LYS+LRKQP N V+ RRLA+ R RN + R
Sbjct: 1 MLLSALLMSVGINSCLCVLLFILYSVLRKQPRNYEVFLPRRLANGTYKRRRNK----VAR 56
Query: 58 FVPSPSWIWKAWETTEEEILAIGGLDALAFQRMLTF 93
++PS WIWK+W TE+E++ GLD + F RM+TF
Sbjct: 57 YIPSLKWIWKSWRPTEKELMESSGLDGVVFMRMITF 92
>AT1G58520.2 | Symbols: RXW8 | hydrolase, acting on ester bonds /
lipase | chr1:21729913-21738165 FORWARD
Length = 1041
Score = 88.6 bits (218), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/68 (60%), Positives = 49/68 (72%)
Query: 26 ILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVPSPSWIWKAWETTEEEILAIGGLDAL 85
I RKQP+N VYFGRRL R D F +RFVPSPSW+ KAWET+E+E+LA GLDA+
Sbjct: 302 IARKQPANYCVYFGRRLVCGGARRYDPFWYERFVPSPSWLVKAWETSEDELLAAAGLDAV 361
Query: 86 AFQRMLTF 93
F RM+ F
Sbjct: 362 VFLRMVIF 369
>AT3G01100.1 | Symbols: HYP1, ATHYP1 | HYP1 (HYPOTHETICAL PROTEIN
1) | chr3:35013-38176 REVERSE
Length = 703
Score = 88.6 bits (218), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Query: 1 MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASV--RIRNNDFFSIDRF 58
M + ALLTS GIN+ LC L F+LYSILRKQPSN VY G RL + + ++ F+++R
Sbjct: 1 MLLSALLTSVGINLGLCFLFFTLYSILRKQPSNVTVY-GPRLVKKDGKSQQSNEFNLERL 59
Query: 59 VPSPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
+P+ W+ +A E T +EIL+ GLDAL F R+ F
Sbjct: 60 LPTAGWVKRALEPTNDEILSNLGLDALVFIRVFVFS 95
>AT3G01100.2 | Symbols: HYP1, ATHYP1 | HYP1 (HYPOTHETICAL PROTEIN
1) | chr3:35810-38176 REVERSE
Length = 596
Score = 88.6 bits (218), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Query: 1 MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASV--RIRNNDFFSIDRF 58
M + ALLTS GIN+ LC L F+LYSILRKQPSN VY G RL + + ++ F+++R
Sbjct: 1 MLLSALLTSVGINLGLCFLFFTLYSILRKQPSNVTVY-GPRLVKKDGKSQQSNEFNLERL 59
Query: 59 VPSPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
+P+ W+ +A E T +EIL+ GLDAL F R+ F
Sbjct: 60 LPTAGWVKRALEPTNDEILSNLGLDALVFIRVFVFS 95
>AT3G54510.2 | Symbols: | early-responsive to dehydration
protein-related / ERD protein-related |
chr3:20180339-20183220 FORWARD
Length = 712
Score = 77.0 bits (188), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 5 ALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVR----IRNNDFFSIDRFVP 60
+LL SA INI L ++ L+S+L+KQP N VVY+ RRL+ + + + RF+P
Sbjct: 5 SLLASASINIGLAVVALWLFSVLKKQPRNAVVYYARRLSDRHHHRPLSLHSSLCLPRFLP 64
Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
S +WI +A+ E+EIL+ GLDAL R+ FG
Sbjct: 65 SVAWIPRAFRVPEDEILSRHGLDALVLIRLFKFG 98