Jatropha Genome Database
- JcCB0454511.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0454511.10 - phase: 0 /partial
(165 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42080.1 | Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9 | ADL1 (AR... 308 1e-84
AT3G61760.1 | Symbols: ADL1B | ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1... 276 4e-75
AT3G60190.1 | Symbols: ADL4, ADLP2, EDR3, DRP1E, ADL1E | ADL1E (... 190 3e-49
AT1G14830.1 | Symbols: ADL1C, ADL5, DRP1C | ADL1C (ARABIDOPSIS D... 189 9e-49
AT2G44590.2 | Symbols: | ADL1D (ARABIDOPSIS DYNAMIN-RELATED PRO... 172 8e-44
AT2G44590.3 | Symbols: ADL1D | ADL1D (ARABIDOPSIS DYNAMIN-RELATE... 172 8e-44
AT2G44590.1 | Symbols: ADL1D | ADL1D (ARABIDOPSIS DYNAMIN-RELATE... 170 3e-43
AT1G10290.1 | Symbols: ADL6, DRP2A | ADL6 (DYNAMIN-LIKE PROTEIN ... 50 9e-07
AT1G59610.1 | Symbols: ADL3, CF1 | ADL3 (ARABIDOPSIS DYNAMIN-LIK... 48 2e-06
>AT5G42080.1 | Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9 | ADL1
(ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding /
GTPase/ protein binding | chr5:16820661-16824536 REVERSE
Length = 610
Score = 308 bits (789), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 144/165 (87%), Positives = 156/165 (94%)
Query: 1 ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
ELKQYPALRVEV NAAIESLDKM+E S+KATL+LVDMECSYLTVDFFRKLPQDV+KGGNP
Sbjct: 446 ELKQYPALRVEVTNAAIESLDKMREGSKKATLQLVDMECSYLTVDFFRKLPQDVEKGGNP 505
Query: 61 THSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELG 120
THSIFDRYNDSYLRRIG+ VLSYVNMVCA LRNSIPKSIVYCQVREAKRSLLDHFF ELG
Sbjct: 506 THSIFDRYNDSYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELG 565
Query: 121 KMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAWSK 165
M+ K LSSLLNEDPA+MERR+A++KRLELYR+AQ+EID VAWSK
Sbjct: 566 TMDMKRLSSLLNEDPAIMERRSAISKRLELYRAAQSEIDAVAWSK 610
>AT3G61760.1 | Symbols: ADL1B | ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B);
GTP binding / GTPase | chr3:22860546-22864092 REVERSE
Length = 610
Score = 276 bits (706), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 130/165 (78%), Positives = 146/165 (88%)
Query: 1 ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
ELKQYP LRVEV AA++SLD+M++ESRKATL LVDME YLTV+FFRKLPQD +KGGNP
Sbjct: 446 ELKQYPTLRVEVSGAAVDSLDRMRDESRKATLLLVDMESGYLTVEFFRKLPQDSEKGGNP 505
Query: 61 THSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELG 120
THSIFDRYND+YLRRIG+ VLSYVNMVCA LRNSIPKSIVYCQVREAKRSLLD FFTELG
Sbjct: 506 THSIFDRYNDAYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELG 565
Query: 121 KMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAWSK 165
+ E LS LL+EDPAV +RR ++AKRLELYRSAQ +I+ VAWSK
Sbjct: 566 QKEMSKLSKLLDEDPAVQQRRTSIAKRLELYRSAQTDIEAVAWSK 610
>AT3G60190.1 | Symbols: ADL4, ADLP2, EDR3, DRP1E, ADL1E | ADL1E
(ARABIDOPSIS DYNAMIN-LIKE 1E); GTP binding / GTPase |
chr3:22244367-22247651 REVERSE
Length = 624
Score = 190 bits (483), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 128/171 (74%), Gaps = 8/171 (4%)
Query: 1 ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDK---- 56
ELK++P+L+VE+ AA SL+K +EES+K+ ++LVDME +YLT +FFRKLPQ++++
Sbjct: 452 ELKRFPSLQVELAAAANSSLEKFREESKKSVIRLVDMESAYLTAEFFRKLPQEIERPVTN 511
Query: 57 ----GGNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLL 112
+P+ + D+Y D + RRI + V +YVNMV TLRN+IPK+ VYCQVR+AK +LL
Sbjct: 512 SKNQTASPSSATLDQYGDGHFRRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALL 571
Query: 113 DHFFTELGKMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAW 163
++F++++ K E K L LL+EDPA+M+RR AKRLELY+ A+ EID VAW
Sbjct: 572 NYFYSQISKREGKQLGQLLDEDPALMDRRLECAKRLELYKKARDEIDAVAW 622
>AT1G14830.1 | Symbols: ADL1C, ADL5, DRP1C | ADL1C (ARABIDOPSIS
DYNAMIN-LIKE PROTEIN 1C); GTP binding / GTPase |
chr1:5107699-5111470 REVERSE
Length = 614
Score = 189 bits (479), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 129/167 (77%), Gaps = 4/167 (2%)
Query: 1 ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDK-GGN 59
ELK++P L ++ AA E+L++ ++ESRK L+LVDME SYLTV+FFRKL + +K N
Sbjct: 447 ELKRFPTLASDIAAAANEALERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEKEKPN 506
Query: 60 PTHSIF---DRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFF 116
P ++ D Y+D++ R+IG+ V +Y+NMVC TLRNS+PK++VYCQVREAKRSLL+ F+
Sbjct: 507 PRNAPAPNADPYSDNHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFY 566
Query: 117 TELGKMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAW 163
++G+ E++ L ++L+EDP +MERR LAKRLELY+ A+ +ID VAW
Sbjct: 567 AQVGRKEKEKLGAMLDEDPQLMERRGTLAKRLELYKQARDDIDAVAW 613
>AT2G44590.2 | Symbols: | ADL1D (ARABIDOPSIS DYNAMIN-RELATED
PROTEIN 1D); GTP binding / GTPase |
chr2:18403856-18406961 REVERSE
Length = 595
Score = 172 bits (436), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 1 ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGG-- 58
ELK++P+L++E+ AA SLDK +EES K+ L+LVDME SYLTVDFFRKL +
Sbjct: 430 ELKRFPSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRKLHVESQNMSLS 489
Query: 59 NPTHSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTE 118
+PT +I D+Y D + R+I + V +Y+ MV TL N+IPK++V+CQVR+AK SLL++F+ +
Sbjct: 490 SPTSAI-DQYGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQ 548
Query: 119 LGKMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAW 163
+ + + K L LL+E+PA+MERR AKRLELY+ A+ EID W
Sbjct: 549 ISQSQGKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVW 593
>AT2G44590.3 | Symbols: ADL1D | ADL1D (ARABIDOPSIS DYNAMIN-RELATED
PROTEIN 1D); GTP binding / GTPase |
chr2:18403856-18406961 REVERSE
Length = 612
Score = 172 bits (436), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 1 ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGG-- 58
ELK++P+L++E+ AA SLDK +EES K+ L+LVDME SYLTVDFFRKL +
Sbjct: 447 ELKRFPSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRKLHVESQNMSLS 506
Query: 59 NPTHSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTE 118
+PT +I D+Y D + R+I + V +Y+ MV TL N+IPK++V+CQVR+AK SLL++F+ +
Sbjct: 507 SPTSAI-DQYGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQ 565
Query: 119 LGKMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAW 163
+ + + K L LL+E+PA+MERR AKRLELY+ A+ EID W
Sbjct: 566 ISQSQGKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVW 610
>AT2G44590.1 | Symbols: ADL1D | ADL1D (ARABIDOPSIS DYNAMIN-RELATED
PROTEIN 1D); GTP binding / GTPase |
chr2:18403856-18406961 REVERSE
Length = 596
Score = 170 bits (431), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 121/166 (72%), Gaps = 4/166 (2%)
Query: 1 ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKG--G 58
ELK++P+L++E+ AA SLDK +EES K+ L+LVDME SYLTVDFFRKL +
Sbjct: 430 ELKRFPSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRKLHVESQNMSLS 489
Query: 59 NPTHSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTE 118
+PT +I D+Y D + R+I + V +Y+ MV TL N+IPK++V+CQVR+AK SLL++F+ +
Sbjct: 490 SPTSAI-DQYGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQ 548
Query: 119 LGKMEQ-KYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAW 163
+ + +Q K L LL+E+PA+MERR AKRLELY+ A+ EID W
Sbjct: 549 ISQSQQGKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVW 594
>AT1G10290.1 | Symbols: ADL6, DRP2A | ADL6 (DYNAMIN-LIKE PROTEIN 6);
GTPase | chr1:3370774-3377120 FORWARD
Length = 914
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 73 LRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMEQKYLSSLLN 132
LR + V YV V +L ++PK++V CQV +AK +L+ ++ + + + + SL+
Sbjct: 730 LRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQ 789
Query: 133 EDPAVMERR 141
ED V RR
Sbjct: 790 EDQNVKRRR 798
>AT1G59610.1 | Symbols: ADL3, CF1 | ADL3 (ARABIDOPSIS DYNAMIN-LIKE
3); GTPase | chr1:21893413-21900780 FORWARD
Length = 920
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 73 LRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMEQKYLSSLLN 132
LR + V YV V +L ++PK++V CQV ++K +L+ ++ + + + + SL+
Sbjct: 737 LRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQ 796
Query: 133 EDPAVMERR 141
ED V RR
Sbjct: 797 EDQNVKRRR 805