Jatropha Genome Database

JcCB0454241.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0454241.10 + phase: 0 
         (408 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63680.1 | Symbols: ATMURE, PDE316, MURE | MURE; ATP binding ...   583   e-167

>AT1G63680.1 | Symbols: ATMURE, PDE316, MURE | MURE; ATP binding /
           acid-amino acid ligase/ ligase | chr1:23614461-23617247
           FORWARD
          Length = 772

 Score =  583 bits (1503), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 295/386 (76%), Positives = 339/386 (87%), Gaps = 6/386 (1%)

Query: 1   MSLAELLDESKVVPVSVAGDLEVEITGIQHDSRMVNAGDLFVCCVGRKTDGHLYLSEADK 60
           M LAELLDESKVVP+SV GDL+VEITGIQHDSR V+AGDLFVCC+G +     +LSEADK
Sbjct: 241 MCLAELLDESKVVPISVYGDLDVEITGIQHDSRGVSAGDLFVCCLGSEN----FLSEADK 296

Query: 61  RGAVAVVASKEIDIEETLGCKGLVIVEDTNAVLPALAAAFYKYPSKNMAVIGITGTDGKT 120
           RGAVAVVASKEIDIE+TLGC+ LVIVEDTNAVL ALA++FY++PSKNM+VIG+TGTDGKT
Sbjct: 297 RGAVAVVASKEIDIEDTLGCRALVIVEDTNAVLAALASSFYRHPSKNMSVIGVTGTDGKT 356

Query: 121 TAAYLIKGMYEAMGLRTGMLSTVAYYIHGDNKLESPNTA--PDAVLVQNLMAKMVHNGTE 178
           T  YLIK +YEAMG+RTGM STV+ YIHGDNKL++PN    PDAVLVQ+LMAKM+HNGTE
Sbjct: 357 TTTYLIKSLYEAMGVRTGMFSTVSCYIHGDNKLDTPNATMNPDAVLVQSLMAKMLHNGTE 416

Query: 179 AVVMEVSSQGPASGSCNEVDFDISVFTNLRVDHLDFQGTEEEYRDAKAELFARMVDPERH 238
           ++VME S Q  A G C+EVDFDI+VFTNL  ++ DF+GT+EEYRDA+A+LF+RMVDPERH
Sbjct: 417 SLVMEASPQELALGKCDEVDFDIAVFTNLTRENTDFRGTDEEYRDAEAKLFSRMVDPERH 476

Query: 239 RKIVNIEDPNASFFIAQGNPDVPVVTFAMDNKSADVHPLKFELSLFETQVLVNTPHGILE 298
           RK+VNI+DPNA+FF+ QGNP+VPVVTFAM+N  ADVHPLKFELSLFETQVLVNTP GILE
Sbjct: 477 RKVVNIDDPNAAFFVQQGNPNVPVVTFAMENTKADVHPLKFELSLFETQVLVNTPQGILE 536

Query: 299 ISSGLLGRHNIYNILXXXXXXXXXXXPLEDIVRGIEEIDAVPGRCELIDEEQAFGVIVDS 358
           ISSGLLGRHNIYNIL           PLEDIVRG+EE+DAVPGRCELIDEEQAFGVIVD 
Sbjct: 537 ISSGLLGRHNIYNILAAVAVGIAVGAPLEDIVRGVEEVDAVPGRCELIDEEQAFGVIVDH 596

Query: 359 AHTPEALSRLLDSVRELRPRRIITGI 384
           A+TP+ LSRLLDS+REL+PRRIIT I
Sbjct: 597 ANTPDGLSRLLDSIRELKPRRIITVI 622