Jatropha Genome Database

JcCB0453991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0453991.10 - phase: 0 
         (133 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66460.1 | Symbols:  | (1-4)-beta-mannan endohydrolase, putat...   131   1e-31
AT3G10900.1 | Symbols:  | (1-4)-beta-mannan endohydrolase, putat...   129   6e-31
AT3G10890.1 | Symbols:  | (1-4)-beta-mannan endohydrolase, putat...   126   5e-30
AT5G01930.1 | Symbols:  | (1-4)-beta-mannan endohydrolase, putat...   106   3e-24
AT3G30540.1 | Symbols:  | (1-4)-beta-mannan endohydrolase family...    97   2e-21
AT4G28320.1 | Symbols:  | glycosyl hydrolase family 5 protein / ...    87   2e-18
AT1G02310.1 | Symbols:  | glycosyl hydrolase family protein 5 / ...    86   7e-18
AT2G20680.1 | Symbols:  | glycosyl hydrolase family 5 protein / ...    84   3e-17

>AT5G66460.1 | Symbols:  | (1-4)-beta-mannan endohydrolase, putative
           | chr5:26538911-26540837 REVERSE
          Length = 431

 Score =  131 bits (330), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 60/81 (74%), Positives = 68/81 (83%)

Query: 28  GFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTWAF 87
           GFV TKGVQF LNG P+YANGFNAYWLMY A+DPS R+K+S+ FQ+A  HGL +ARTWAF
Sbjct: 30  GFVRTKGVQFSLNGYPYYANGFNAYWLMYVASDPSQRSKISTAFQDASRHGLTVARTWAF 89

Query: 88  NDGQDRALQYSPGSYNEQAFQ 108
           +DG  RALQYSPGSYNE  FQ
Sbjct: 90  SDGGYRALQYSPGSYNEDMFQ 110


>AT3G10900.1 | Symbols:  | (1-4)-beta-mannan endohydrolase, putative
           | chr3:3410252-3412070 REVERSE
          Length = 408

 Score =  129 bits (323), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 60/109 (55%), Positives = 77/109 (70%), Gaps = 1/109 (0%)

Query: 1   MKSWCLILFVVLMVHKQGSFVQVKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFAND 60
           MK  C I+ + +++ +    V+    DGFV+  GVQF+LNG PFYANGFNAYWL Y A D
Sbjct: 1   MKCLCFIVLLAIVIAQSYVGVEAAPSDGFVSRNGVQFILNGKPFYANGFNAYWLAYEATD 60

Query: 61  PSTRNKVSSVFQEAKAHGLALARTWAFNDGQ-DRALQYSPGSYNEQAFQ 108
           P+TR K+++VFQ A + GL +ARTW F DG   RALQ +PGSY+EQ FQ
Sbjct: 61  PTTRFKITNVFQNATSLGLTIARTWGFRDGAIYRALQTAPGSYDEQTFQ 109


>AT3G10890.1 | Symbols:  | (1-4)-beta-mannan endohydrolase, putative
           | chr3:3407455-3409000 REVERSE
          Length = 414

 Score =  126 bits (316), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/110 (52%), Positives = 76/110 (69%), Gaps = 2/110 (1%)

Query: 1   MKSWCLILFVVLMVHKQGSFVQVKA--EDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFA 58
           MK  C ++ + +++ +  S + VK+   DGFV+ KGVQF+LNG PFYANGFNAYWL Y A
Sbjct: 1   MKCLCFVVLLAILIAQNSSDLGVKSASSDGFVSRKGVQFILNGKPFYANGFNAYWLAYEA 60

Query: 59  NDPSTRNKVSSVFQEAKAHGLALARTWAFNDGQDRALQYSPGSYNEQAFQ 108
            D +TR K++ VFQ A  H L + RTW F DG  RALQ +PG Y+E+ FQ
Sbjct: 61  TDSTTRFKITYVFQNATIHDLTIVRTWGFRDGGYRALQIAPGVYDEKTFQ 110


>AT5G01930.1 | Symbols:  | (1-4)-beta-mannan endohydrolase, putative
           | chr5:361189-362867 REVERSE
          Length = 448

 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/79 (62%), Positives = 58/79 (73%)

Query: 30  VTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTWAFND 89
           V  KG+QF LNG PFY NGFN YW+M  A D STR KV+ VFQ+A A G+ + RTWAFND
Sbjct: 48  VQRKGMQFTLNGQPFYVNGFNTYWMMTLAADNSTRGKVTEVFQQASAVGMTVGRTWAFND 107

Query: 90  GQDRALQYSPGSYNEQAFQ 108
           GQ RALQ SP  Y+E+ F+
Sbjct: 108 GQWRALQKSPSVYDEEVFK 126


>AT3G30540.1 | Symbols:  | (1-4)-beta-mannan endohydrolase family |
           chr3:12144792-12146475 REVERSE
          Length = 351

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 15/108 (13%)

Query: 1   MKSWCLILFVVLMVHKQGSFVQVKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFAND 60
           MK  C I+ + +++ +    V+    DGFV+  GVQF+LNG PFYANGFNAYWL Y A D
Sbjct: 1   MKCLCFIVLLAIVIAQSYVGVEAAPSDGFVSRNGVQFILNGKPFYANGFNAYWLAYEATD 60

Query: 61  PSTRNKVSSVFQEAKAHGLALARTWAFNDGQDRALQYSPGSYNEQAFQ 108
           P+TR K+++ F+    +               RALQ +PGSY+EQ FQ
Sbjct: 61  PATRFKITNGFRNGAIY---------------RALQTAPGSYDEQTFQ 93


>AT4G28320.1 | Symbols:  | glycosyl hydrolase family 5 protein /
           cellulase family protein | chr4:14018293-14019972
           REVERSE
          Length = 431

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 53/85 (62%)

Query: 24  KAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALAR 83
           KA+ GFV   G QF+++  P Y NG+N+YW M  A D  +RN V  + +     GL + R
Sbjct: 36  KAKLGFVKRNGTQFVVDDKPLYVNGWNSYWFMDHAVDEHSRNLVGEMLEAGAKMGLTVCR 95

Query: 84  TWAFNDGQDRALQYSPGSYNEQAFQ 108
           TWAFNDG   ALQ SPG ++E+ FQ
Sbjct: 96  TWAFNDGGYNALQISPGRFDERVFQ 120


>AT1G02310.1 | Symbols:  | glycosyl hydrolase family protein 5 /
           cellulase family protein / (1-4)-beta-mannan
           endohydrolase, putative | chr1:458243-460652 REVERSE
          Length = 411

 Score = 85.9 bits (211), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 2/88 (2%)

Query: 23  VKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNK--VSSVFQEAKAHGLA 80
           V  + GFV   G QF+LNG   Y NGFNAYW+M  A D +++ +  V++  ++A A G+ 
Sbjct: 23  VAVKTGFVGRNGTQFVLNGEQVYLNGFNAYWMMTTAADTASKGRATVTTALRQASAVGMN 82

Query: 81  LARTWAFNDGQDRALQYSPGSYNEQAFQ 108
           +AR W FN+G    LQ SPGSY+E  F+
Sbjct: 83  VARIWGFNEGDYIPLQISPGSYSEDVFK 110


>AT2G20680.1 | Symbols:  | glycosyl hydrolase family 5 protein /
           cellulase family protein | chr2:8921024-8923066 FORWARD
          Length = 433

 Score = 84.0 bits (206), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/88 (40%), Positives = 56/88 (63%)

Query: 21  VQVKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLA 80
           ++ + E  FV   G QF+++G   Y NG+N+YW M  A +  +R++VS++ +     GL 
Sbjct: 34  LKTEGELAFVKRNGTQFVVDGKALYVNGWNSYWFMDHAVNDHSRHRVSAMLEAGAKMGLT 93

Query: 81  LARTWAFNDGQDRALQYSPGSYNEQAFQ 108
           + RTWAFNDG   ALQ SPG ++E+ F+
Sbjct: 94  VCRTWAFNDGGYNALQISPGRFDERVFK 121