Jatropha Genome Database

JcCB0453831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0453831.10 - phase: 2 /partial
         (212 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G39140.5 | Symbols:  | protein binding / zinc ion binding | c...   197   5e-51
AT4G39140.4 | Symbols:  | protein binding / zinc ion binding | c...   197   5e-51
AT4G39140.3 | Symbols:  | protein binding / zinc ion binding | c...   197   5e-51
AT4G39140.2 | Symbols:  | protein binding / zinc ion binding | c...   197   5e-51
AT4G39140.1 | Symbols:  | protein binding / zinc ion binding | c...   197   5e-51
AT2G21500.1 | Symbols:  | protein binding / zinc ion binding | c...   181   3e-46
AT2G21500.2 | Symbols:  | protein binding / zinc ion binding | c...   181   3e-46
AT1G75400.1 | Symbols:  | protein binding / zinc ion binding | c...   140   8e-34
AT1G19680.1 | Symbols:  | protein binding / zinc ion binding | c...   139   1e-33
AT5G18260.1 | Symbols:  | protein binding / zinc ion binding | c...    80   8e-16
AT1G14180.1 | Symbols:  | protein binding / zinc ion binding | c...    77   7e-15
AT1G14180.2 | Symbols:  | protein binding / zinc ion binding | c...    76   1e-14

>AT4G39140.5 | Symbols:  | protein binding / zinc ion binding |
           chr4:18229637-18231282 REVERSE
          Length = 429

 Score =  197 bits (500), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 136/218 (62%), Gaps = 9/218 (4%)

Query: 1   HAFSELMATSHRERW----SFDTESWGLNHEKTRXXXXXXXXXXVDFQTCGICSKLLTEK 56
            AFSE+M++S   +     ++D + +GL  +K                TCG CS+ L+EK
Sbjct: 213 QAFSEMMSSSRSNKALSYDNYDNDCFGLQRDKIDHHGNRMSKHQQ--HTCGACSRPLSEK 270

Query: 57  SLWSSQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCTLGEKQTHKLSQ 116
           SLWSSQK+ ++NELSV A+L CGHVYH ECLE +TP+I+K+DPSCP+CT+GEK+T KLS+
Sbjct: 271 SLWSSQKIFMTNELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPICTMGEKKTAKLSE 330

Query: 117 KAFKAELDLKAK-NKRSRNRVVDSDLDGDS-VMFNRL-KGSGHEXXXXXXXXXXXXXXXX 173
           KA K E+DLKA+ NKR RNRV+DSD D D  VMF+   + +                   
Sbjct: 331 KALKVEMDLKARHNKRLRNRVLDSDFDCDDFVMFDHSHRTAAAASKSPRLVSSSSAKSYS 390

Query: 174 XXXFLKRHFSFGSSKASKSLTENHATKKKGFFWTRSMK 211
              FL RHFSFGS    KS  EN   KKKGFFWT+S K
Sbjct: 391 AKPFLARHFSFGSRSNYKSPKENLPVKKKGFFWTKSSK 428


>AT4G39140.4 | Symbols:  | protein binding / zinc ion binding |
           chr4:18229637-18231282 REVERSE
          Length = 429

 Score =  197 bits (500), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 136/218 (62%), Gaps = 9/218 (4%)

Query: 1   HAFSELMATSHRERW----SFDTESWGLNHEKTRXXXXXXXXXXVDFQTCGICSKLLTEK 56
            AFSE+M++S   +     ++D + +GL  +K                TCG CS+ L+EK
Sbjct: 213 QAFSEMMSSSRSNKALSYDNYDNDCFGLQRDKIDHHGNRMSKHQQ--HTCGACSRPLSEK 270

Query: 57  SLWSSQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCTLGEKQTHKLSQ 116
           SLWSSQK+ ++NELSV A+L CGHVYH ECLE +TP+I+K+DPSCP+CT+GEK+T KLS+
Sbjct: 271 SLWSSQKIFMTNELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPICTMGEKKTAKLSE 330

Query: 117 KAFKAELDLKAK-NKRSRNRVVDSDLDGDS-VMFNRL-KGSGHEXXXXXXXXXXXXXXXX 173
           KA K E+DLKA+ NKR RNRV+DSD D D  VMF+   + +                   
Sbjct: 331 KALKVEMDLKARHNKRLRNRVLDSDFDCDDFVMFDHSHRTAAAASKSPRLVSSSSAKSYS 390

Query: 174 XXXFLKRHFSFGSSKASKSLTENHATKKKGFFWTRSMK 211
              FL RHFSFGS    KS  EN   KKKGFFWT+S K
Sbjct: 391 AKPFLARHFSFGSRSNYKSPKENLPVKKKGFFWTKSSK 428


>AT4G39140.3 | Symbols:  | protein binding / zinc ion binding |
           chr4:18229637-18231282 REVERSE
          Length = 429

 Score =  197 bits (500), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 136/218 (62%), Gaps = 9/218 (4%)

Query: 1   HAFSELMATSHRERW----SFDTESWGLNHEKTRXXXXXXXXXXVDFQTCGICSKLLTEK 56
            AFSE+M++S   +     ++D + +GL  +K                TCG CS+ L+EK
Sbjct: 213 QAFSEMMSSSRSNKALSYDNYDNDCFGLQRDKIDHHGNRMSKHQQ--HTCGACSRPLSEK 270

Query: 57  SLWSSQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCTLGEKQTHKLSQ 116
           SLWSSQK+ ++NELSV A+L CGHVYH ECLE +TP+I+K+DPSCP+CT+GEK+T KLS+
Sbjct: 271 SLWSSQKIFMTNELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPICTMGEKKTAKLSE 330

Query: 117 KAFKAELDLKAK-NKRSRNRVVDSDLDGDS-VMFNRL-KGSGHEXXXXXXXXXXXXXXXX 173
           KA K E+DLKA+ NKR RNRV+DSD D D  VMF+   + +                   
Sbjct: 331 KALKVEMDLKARHNKRLRNRVLDSDFDCDDFVMFDHSHRTAAAASKSPRLVSSSSAKSYS 390

Query: 174 XXXFLKRHFSFGSSKASKSLTENHATKKKGFFWTRSMK 211
              FL RHFSFGS    KS  EN   KKKGFFWT+S K
Sbjct: 391 AKPFLARHFSFGSRSNYKSPKENLPVKKKGFFWTKSSK 428


>AT4G39140.2 | Symbols:  | protein binding / zinc ion binding |
           chr4:18229637-18231282 REVERSE
          Length = 429

 Score =  197 bits (500), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 136/218 (62%), Gaps = 9/218 (4%)

Query: 1   HAFSELMATSHRERW----SFDTESWGLNHEKTRXXXXXXXXXXVDFQTCGICSKLLTEK 56
            AFSE+M++S   +     ++D + +GL  +K                TCG CS+ L+EK
Sbjct: 213 QAFSEMMSSSRSNKALSYDNYDNDCFGLQRDKIDHHGNRMSKHQQ--HTCGACSRPLSEK 270

Query: 57  SLWSSQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCTLGEKQTHKLSQ 116
           SLWSSQK+ ++NELSV A+L CGHVYH ECLE +TP+I+K+DPSCP+CT+GEK+T KLS+
Sbjct: 271 SLWSSQKIFMTNELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPICTMGEKKTAKLSE 330

Query: 117 KAFKAELDLKAK-NKRSRNRVVDSDLDGDS-VMFNRL-KGSGHEXXXXXXXXXXXXXXXX 173
           KA K E+DLKA+ NKR RNRV+DSD D D  VMF+   + +                   
Sbjct: 331 KALKVEMDLKARHNKRLRNRVLDSDFDCDDFVMFDHSHRTAAAASKSPRLVSSSSAKSYS 390

Query: 174 XXXFLKRHFSFGSSKASKSLTENHATKKKGFFWTRSMK 211
              FL RHFSFGS    KS  EN   KKKGFFWT+S K
Sbjct: 391 AKPFLARHFSFGSRSNYKSPKENLPVKKKGFFWTKSSK 428


>AT4G39140.1 | Symbols:  | protein binding / zinc ion binding |
           chr4:18229637-18231282 REVERSE
          Length = 429

 Score =  197 bits (500), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 136/218 (62%), Gaps = 9/218 (4%)

Query: 1   HAFSELMATSHRERW----SFDTESWGLNHEKTRXXXXXXXXXXVDFQTCGICSKLLTEK 56
            AFSE+M++S   +     ++D + +GL  +K                TCG CS+ L+EK
Sbjct: 213 QAFSEMMSSSRSNKALSYDNYDNDCFGLQRDKIDHHGNRMSKHQQ--HTCGACSRPLSEK 270

Query: 57  SLWSSQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCTLGEKQTHKLSQ 116
           SLWSSQK+ ++NELSV A+L CGHVYH ECLE +TP+I+K+DPSCP+CT+GEK+T KLS+
Sbjct: 271 SLWSSQKIFMTNELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPICTMGEKKTAKLSE 330

Query: 117 KAFKAELDLKAK-NKRSRNRVVDSDLDGDS-VMFNRL-KGSGHEXXXXXXXXXXXXXXXX 173
           KA K E+DLKA+ NKR RNRV+DSD D D  VMF+   + +                   
Sbjct: 331 KALKVEMDLKARHNKRLRNRVLDSDFDCDDFVMFDHSHRTAAAASKSPRLVSSSSAKSYS 390

Query: 174 XXXFLKRHFSFGSSKASKSLTENHATKKKGFFWTRSMK 211
              FL RHFSFGS    KS  EN   KKKGFFWT+S K
Sbjct: 391 AKPFLARHFSFGSRSNYKSPKENLPVKKKGFFWTKSSK 428


>AT2G21500.1 | Symbols:  | protein binding / zinc ion binding |
           chr2:9207965-9209575 REVERSE
          Length = 421

 Score =  181 bits (459), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/218 (50%), Positives = 139/218 (63%), Gaps = 13/218 (5%)

Query: 1   HAFSELMATSHRERWSFDTESWGLNHEKTRXXXXXXXXXXVDFQTCGICSKLLTEKSLWS 60
            AFSE+MA S RE  S+D E +GL  +K             D Q CG CS+ L+EKSL S
Sbjct: 209 QAFSEMMAYSRRESCSYDNECFGLRRDKIDNLGSRKSN---DQQNCGACSRSLSEKSLLS 265

Query: 61  SQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCTLGEKQTHKLSQKAFK 120
           SQK+  +NELSV A+L CGHVYH+ECLE +TP+I+K+DPSCP+CTLGEK+T KLS+KA K
Sbjct: 266 SQKIFATNELSVAAILACGHVYHSECLEQMTPEIDKFDPSCPICTLGEKKTFKLSEKALK 325

Query: 121 AELDLKAK-NKRSRNRVVDSDLDGDSVMFNR--LKGSGHEXXXXXXXXXXXXXXXXXXXF 177
           A+L++KA+ NKR RNRVVDSD   + V FN       G++                   F
Sbjct: 326 ADLEMKARHNKRLRNRVVDSD---EFVKFNNNHEAAVGYKGKTPKLISSSSLRSYSPKPF 382

Query: 178 LKRHFSFGS-SKASKSLTENHAT---KKKGFFWTRSMK 211
           L RHFSFGS S + KS  E H+    +KKGFFWT+S K
Sbjct: 383 LARHFSFGSRSNSVKSPKEIHSPSSLRKKGFFWTKSSK 420


>AT2G21500.2 | Symbols:  | protein binding / zinc ion binding |
           chr2:9207965-9209575 REVERSE
          Length = 421

 Score =  181 bits (459), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/218 (50%), Positives = 139/218 (63%), Gaps = 13/218 (5%)

Query: 1   HAFSELMATSHRERWSFDTESWGLNHEKTRXXXXXXXXXXVDFQTCGICSKLLTEKSLWS 60
            AFSE+MA S RE  S+D E +GL  +K             D Q CG CS+ L+EKSL S
Sbjct: 209 QAFSEMMAYSRRESCSYDNECFGLRRDKIDNLGSRKSN---DQQNCGACSRSLSEKSLLS 265

Query: 61  SQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCTLGEKQTHKLSQKAFK 120
           SQK+  +NELSV A+L CGHVYH+ECLE +TP+I+K+DPSCP+CTLGEK+T KLS+KA K
Sbjct: 266 SQKIFATNELSVAAILACGHVYHSECLEQMTPEIDKFDPSCPICTLGEKKTFKLSEKALK 325

Query: 121 AELDLKAK-NKRSRNRVVDSDLDGDSVMFNR--LKGSGHEXXXXXXXXXXXXXXXXXXXF 177
           A+L++KA+ NKR RNRVVDSD   + V FN       G++                   F
Sbjct: 326 ADLEMKARHNKRLRNRVVDSD---EFVKFNNNHEAAVGYKGKTPKLISSSSLRSYSPKPF 382

Query: 178 LKRHFSFGS-SKASKSLTENHAT---KKKGFFWTRSMK 211
           L RHFSFGS S + KS  E H+    +KKGFFWT+S K
Sbjct: 383 LARHFSFGSRSNSVKSPKEIHSPSSLRKKGFFWTKSSK 420


>AT1G75400.1 | Symbols:  | protein binding / zinc ion binding |
           chr1:28297609-28299464 FORWARD
          Length = 455

 Score =  140 bits (352), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 120/211 (56%), Gaps = 11/211 (5%)

Query: 1   HAFSELMATSHRERWSFDTESWGLNHEK--TRXXXXXXXXXXVDFQTCGICSKLLTEKSL 58
           + FSEL+A S R+RWSFD+E  G    K              VD Q CG CSKLLTE+S 
Sbjct: 234 NTFSELVAYSQRDRWSFDSEHLGSGRRKLSGGSSRFSFSPSVVDQQVCGACSKLLTERSS 293

Query: 59  WSSQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCTLGEKQTHKLSQKA 118
                 + + EL + AVL CGHVYHAECLET+T DI KYDP+CP+CT+GEK+  K+++KA
Sbjct: 294 ------IATFELPIAAVLACGHVYHAECLETMTTDIEKYDPACPICTIGEKRVAKITRKA 347

Query: 119 FKAELDLKAKN-KRSRNRVVDSDLDGDSVMFNRLKGSGHEXXXXXXXXXXXXXXXXXXXF 177
            KAE + KAK  KR +NRVVDS  + +   F   K    E                   F
Sbjct: 348 LKAEAEAKAKQYKRCKNRVVDSYGESECDEFVFQKMGKREGKALKLEASCSSKSSSNKSF 407

Query: 178 LKRHFSFGSSKASKSLTENHATKKKGFFWTR 208
           LK HF+  SSK +K  +++ A KK   FW+R
Sbjct: 408 LKWHFASISSKWNKPSSKDSALKKG--FWSR 436


>AT1G19680.1 | Symbols:  | protein binding / zinc ion binding |
           chr1:6805909-6807682 FORWARD
          Length = 444

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 116/213 (54%), Gaps = 19/213 (8%)

Query: 1   HAFSELMATSHRERWSFDTESWGLNHEK--TRXXXXXXXXXXVDFQTCGICSKLLTEKSL 58
           +AF EL+A S RERWSFD E  G    +              VD QTCG CSKLLTE+S 
Sbjct: 226 NAFCELVAQSQRERWSFDNEHLGSGRRRLSGCSSSRFSCSPSVDQQTCGRCSKLLTERSP 285

Query: 59  WSSQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCTLGEKQTHKLSQKA 118
                 V   +L + AVL CGHVYHA CLET+T +  KYDP+CP+CT  E Q  KLS+KA
Sbjct: 286 ------VARFDLPIPAVLACGHVYHAACLETMTNETEKYDPTCPICT--ETQVTKLSRKA 337

Query: 119 FKAELDLKAKN-KRSRNRVVDSDL--DGDSVMFNRLKGSGHEXXXXXXXXXXXXXXXXXX 175
            KAE +LKA + KR +NRVVDS +  + + +MF  L     E                  
Sbjct: 338 LKAEAELKATSYKRCKNRVVDSYVRSECEDLMFQNL--GKREGKGLKMDPSSNTKGSTSK 395

Query: 176 XFLKRHFSFGSSKASKSLTENHATKKKGFFWTR 208
            F+K HF   S+K SK+     +T KK  FW+R
Sbjct: 396 SFMKWHFGSVSTKWSKA---RDSTSKKS-FWSR 424


>AT5G18260.1 | Symbols:  | protein binding / zinc ion binding |
           chr5:6036226-6037295 REVERSE
          Length = 320

 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 44  QTCGICSKLLTEKSLWSSQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPV 103
           Q CGIC KLL++KS WSS K++ S ++    V  C HVYH ECL+  TP     DPSCPV
Sbjct: 190 QRCGICKKLLSQKSPWSSYKILRSRDMPATGVFPCHHVYHVECLDKATPTAQTRDPSCPV 249

Query: 104 C--TLGEKQTHKLSQKAFKAEL 123
           C  T+G  +   ++ +  +  L
Sbjct: 250 CSNTIGVMEQPLIAPETLQMAL 271


>AT1G14180.1 | Symbols:  | protein binding / zinc ion binding |
           chr1:4847828-4848970 FORWARD
          Length = 348

 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 45/65 (69%)

Query: 46  CGICSKLLTEKSLWSSQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCT 105
           CG+C++ L++KS W S+ +V + ++ V  VL+C HV+H ECL+  TP I + DP CP+CT
Sbjct: 185 CGLCNRYLSQKSPWGSRSIVRNRDMPVTGVLSCQHVFHVECLDQSTPKIQRNDPLCPICT 244

Query: 106 LGEKQ 110
             E +
Sbjct: 245 KQEGE 249


>AT1G14180.2 | Symbols:  | protein binding / zinc ion binding |
           chr1:4847976-4848970 FORWARD
          Length = 297

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 46/68 (67%)

Query: 46  CGICSKLLTEKSLWSSQKLVLSNELSVVAVLTCGHVYHAECLETLTPDINKYDPSCPVCT 105
           CG+C++ L++KS W S+ +V + ++ V  VL+C HV+H ECL+  TP I + DP CP+CT
Sbjct: 134 CGLCNRYLSQKSPWGSRSIVRNRDMPVTGVLSCQHVFHVECLDQSTPKIQRNDPLCPICT 193

Query: 106 LGEKQTHK 113
             E +  K
Sbjct: 194 KQEGEHFK 201