Jatropha Genome Database

JcCB0452011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0452011.10 + phase: 2 /pseudo/partial
         (256 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19340.1 | Symbols:  | methyltransferase MT-A70 family protei...   258   2e-69

>AT1G19340.1 | Symbols:  | methyltransferase MT-A70 family protein |
           chr1:6684798-6686798 FORWARD
          Length = 414

 Score =  258 bits (660), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 121/188 (64%), Positives = 146/188 (77%)

Query: 50  QPDQCSWRRILPVFNNLVVNETCDDVEAEFLNGKYVLPRQSCFYMSDLGQIRNLIPDESD 109
           + + C+ +R+  VFNNLVVNE  ++VEAEF N +Y++PR SCFYMSDL  IRNL+P +S+
Sbjct: 165 EGESCNEQRVFQVFNNLVVNEIGEEVEAEFSNRRYIMPRNSCFYMSDLHHIRNLVPAKSE 224

Query: 110 CGFNLIVVDPPWENASASQKLLYPTLPNRYFLSLPIKQLTHTDGALVALWVTNREKLRDF 169
            G+NLIV+DPPWENASA QK  YPTLPN+YFLSLPIKQL H +GALVALWVTNREKL  F
Sbjct: 225 EGYNLIVIDPPWENASAHQKSKYPTLPNQYFLSLPIKQLAHAEGALVALWVTNREKLLSF 284

Query: 170 VEKELFPTWGVNYAASFYWLKVKADGSLITDLDLFHHRPYECLLLGYCRREVACPVDFCR 229
           VEKELFP WG+ Y A+ YWLKVK DG+LI DLDL HH+PYE LLLGY   E+A       
Sbjct: 285 VEKELFPAWGIKYVATMYWLKVKPDGTLICDLDLVHHKPYEYLLLGYHFTELAGSEKRSD 344

Query: 230 ALILNRCQ 237
             +L++ Q
Sbjct: 345 FKLLDKNQ 352