Jatropha Genome Database

JcCB0447941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0447941.10 - phase: 0 /partial
         (94 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G20070.1 | Symbols: ATAAH | ATAAH (Arabidopsis thaliana Allan...   119   5e-28

>AT4G20070.1 | Symbols: ATAAH | ATAAH (Arabidopsis thaliana
           Allantoate Amidohydrolase); allantoate deiminase/
           metallopeptidase | chr4:10861548-10864529 FORWARD
          Length = 525

 Score =  119 bits (297), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/65 (80%), Positives = 61/65 (93%)

Query: 1   GVTVQESLKEKSIGITEESLLQLKYDPRSVWGYIEVHIEQGPVLEWAGFPLGVVKGIAGQ 60
           G++VQ++LKE SI IT+E+L+QLKYDP SVWGY+EVHIEQGPVLEW G+PLGVVKGIAGQ
Sbjct: 245 GISVQDALKENSIDITDENLMQLKYDPASVWGYVEVHIEQGPVLEWVGYPLGVVKGIAGQ 304

Query: 61  TRLKV 65
           TRLKV
Sbjct: 305 TRLKV 309