Jatropha Genome Database

JcCB0446791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0446791.10 + phase: 0 /partial
         (127 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G70730.3 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   229   2e-61
AT1G70730.1 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   229   4e-61
AT1G70730.2 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   229   4e-61
AT1G23190.1 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   226   2e-60
AT5G51820.1 | Symbols: PGM, ATPGMP, PGM1, STF1 | PGM (PHOSPHOGLU...   135   5e-33

>AT1G70730.3 | Symbols:  | phosphoglucomutase, cytoplasmic, putative
           / glucose phosphomutase, putative |
           chr1:26669020-26673166 REVERSE
          Length = 662

 Score =  229 bits (585), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 112/128 (87%), Positives = 117/128 (91%), Gaps = 1/128 (0%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           M+AANGVRRVWVGQN LLSTPAVSA+IRERVG DGSKATGAFILTASHNPGGP EDFGIK
Sbjct: 155 MAAANGVRRVWVGQNSLLSTPAVSAIIRERVGADGSKATGAFILTASHNPGGPTEDFGIK 214

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIA-DLPNVDISAIGVSNFSGPEGPFDVEVFDS 119
           YNMENGGPAPE ITDKIYENTKTIKEY IA DLP VDIS IG+++F GPEG FDVEVFDS
Sbjct: 215 YNMENGGPAPESITDKIYENTKTIKEYPIAEDLPRVDISTIGITSFEGPEGKFDVEVFDS 274

Query: 120 ASDYVKLM 127
           A DYVKLM
Sbjct: 275 ADDYVKLM 282


>AT1G70730.1 | Symbols:  | phosphoglucomutase, cytoplasmic, putative
           / glucose phosphomutase, putative |
           chr1:26669020-26672726 REVERSE
          Length = 585

 Score =  229 bits (583), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 112/128 (87%), Positives = 117/128 (91%), Gaps = 1/128 (0%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           M+AANGVRRVWVGQN LLSTPAVSA+IRERVG DGSKATGAFILTASHNPGGP EDFGIK
Sbjct: 78  MAAANGVRRVWVGQNSLLSTPAVSAIIRERVGADGSKATGAFILTASHNPGGPTEDFGIK 137

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIA-DLPNVDISAIGVSNFSGPEGPFDVEVFDS 119
           YNMENGGPAPE ITDKIYENTKTIKEY IA DLP VDIS IG+++F GPEG FDVEVFDS
Sbjct: 138 YNMENGGPAPESITDKIYENTKTIKEYPIAEDLPRVDISTIGITSFEGPEGKFDVEVFDS 197

Query: 120 ASDYVKLM 127
           A DYVKLM
Sbjct: 198 ADDYVKLM 205


>AT1G70730.2 | Symbols:  | phosphoglucomutase, cytoplasmic, putative
           / glucose phosphomutase, putative |
           chr1:26669020-26673166 REVERSE
          Length = 605

 Score =  229 bits (583), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 112/128 (87%), Positives = 117/128 (91%), Gaps = 1/128 (0%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           M+AANGVRRVWVGQN LLSTPAVSA+IRERVG DGSKATGAFILTASHNPGGP EDFGIK
Sbjct: 98  MAAANGVRRVWVGQNSLLSTPAVSAIIRERVGADGSKATGAFILTASHNPGGPTEDFGIK 157

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIA-DLPNVDISAIGVSNFSGPEGPFDVEVFDS 119
           YNMENGGPAPE ITDKIYENTKTIKEY IA DLP VDIS IG+++F GPEG FDVEVFDS
Sbjct: 158 YNMENGGPAPESITDKIYENTKTIKEYPIAEDLPRVDISTIGITSFEGPEGKFDVEVFDS 217

Query: 120 ASDYVKLM 127
           A DYVKLM
Sbjct: 218 ADDYVKLM 225


>AT1G23190.1 | Symbols:  | phosphoglucomutase, cytoplasmic, putative
           / glucose phosphomutase, putative | chr1:8219946-8224186
           FORWARD
          Length = 583

 Score =  226 bits (577), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/128 (87%), Positives = 117/128 (91%), Gaps = 1/128 (0%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           M+AANGVRRVWVG+N LLSTPAVSAVIRER G DGSKATGAFILTASHNPGGP EDFGIK
Sbjct: 77  MAAANGVRRVWVGKNTLLSTPAVSAVIRERSGADGSKATGAFILTASHNPGGPTEDFGIK 136

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIA-DLPNVDISAIGVSNFSGPEGPFDVEVFDS 119
           YNMENGGPAPE ITDKIYENTKTIKEY IA DLPNVDISA+GV++F GPEG FDVEVFD 
Sbjct: 137 YNMENGGPAPESITDKIYENTKTIKEYPIAQDLPNVDISAVGVTSFEGPEGKFDVEVFDP 196

Query: 120 ASDYVKLM 127
           A DYVKLM
Sbjct: 197 ADDYVKLM 204


>AT5G51820.1 | Symbols: PGM, ATPGMP, PGM1, STF1 | PGM
           (PHOSPHOGLUCOMUTASE); phosphoglucomutase |
           chr5:21063531-21067933 REVERSE
          Length = 623

 Score =  135 bits (341), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 69/127 (54%), Positives = 93/127 (73%), Gaps = 10/127 (7%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           ++A NGV ++ VG+ G+LSTPAVSAVIR+R      KA G FI++ASHNPGGP  D+GIK
Sbjct: 141 IAAGNGVGQILVGKEGILSTPAVSAVIRKR------KANGGFIMSASHNPGGPEYDWGIK 194

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIADLPNVDISAIGVSNFSGPEGPFDVEVFDSA 120
           +N  +G PAPE ITDKIY NT +I E  +A++P++D+S +GV+ +    G F VEV D  
Sbjct: 195 FNYSSGQPAPETITDKIYGNTLSISEIKVAEIPDIDLSQVGVTKY----GNFSVEVIDPV 250

Query: 121 SDYVKLM 127
           SDY++LM
Sbjct: 251 SDYLELM 257