Jatropha Genome Database

JcCB0444321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0444321.10 - phase: 0 /pseudo/partial
         (115 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17050.1 | Symbols: UGLYAH | UGLYAH (UREIDOGLYCINE AMINOHYDRO...   144   1e-35

>AT4G17050.1 | Symbols: UGLYAH | UGLYAH (UREIDOGLYCINE
           AMINOHYDROLASE); transcription factor |
           chr4:9589662-9592413 FORWARD
          Length = 298

 Score =  144 bits (363), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 68/69 (98%)

Query: 47  FVALQEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVIWMAPFVPQWYAALGKTRTRYLL 106
           F+ ++EVHYNQHGLLLLEGQGIYRLGD+WYPVQAGDVIWMAPFVPQWYAALGKTR+RYLL
Sbjct: 230 FLNVKEVHYNQHGLLLLEGQGIYRLGDNWYPVQAGDVIWMAPFVPQWYAALGKTRSRYLL 289

Query: 107 YKDVNRNPL 115
           YKDVNRNPL
Sbjct: 290 YKDVNRNPL 298