Jatropha Genome Database

JcCB0432281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0432281.10 - phase: 0 /pseudo
         (149 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26555.1 | Symbols:  | immunophilin / FKBP-type peptidyl-prol...   178   1e-45

>AT4G26555.1 | Symbols:  | immunophilin / FKBP-type peptidyl-prolyl
           cis-trans isomerase family protein |
           chr4:13404622-13406178 REVERSE
          Length = 207

 Score =  178 bits (451), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 102/125 (81%), Gaps = 1/125 (0%)

Query: 7   FVSLSVKRFPRRVLLKSIGFNSILLRVS-PVFAAPVPDMKEPQVVRTLKLDSGVRIQEII 65
           F S+S    PRR+ ++  GF S+L  +  P  AAPVP MKEP+V+RTLKL SGVR QEII
Sbjct: 35  FSSVSAVHVPRRMFMQLSGFGSVLTLLDFPSLAAPVPQMKEPEVIRTLKLPSGVRYQEII 94

Query: 66  EGEGSEAHEGDVVEINYVCRRSNGYFVHSTVDQFSGESSPVILPLDENRIIKGLKDVLIG 125
           EGEG EAHEGD+VE+NYVCRR+NGYFVHSTVDQFSGESSPV L LDEN +I+GLK+VL+G
Sbjct: 95  EGEGREAHEGDLVELNYVCRRANGYFVHSTVDQFSGESSPVKLILDENDVIEGLKEVLVG 154

Query: 126 MKIGG 130
           MK GG
Sbjct: 155 MKAGG 159