Jatropha Genome Database

JcCB0431651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0431651.10 - phase: 0 /partial
         (341 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44970.1 | Symbols:  | lipase-related | chr2:18548999-1855201...   455   e-128
AT2G44970.2 | Symbols:  | lipase-related | chr2:18548999-1855201...   455   e-128

>AT2G44970.1 | Symbols:  | lipase-related | chr2:18548999-18552019
           REVERSE
          Length = 503

 Score =  455 bits (1170), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/339 (65%), Positives = 267/339 (78%), Gaps = 15/339 (4%)

Query: 1   DDIGWVQRTPRMAPVEDGTARFLDLLNKIRNGEHKLQDSFVYLLIPGLFSNHGPLYFVGT 60
           DDIGW+QR P M PVEDGT RF  +L  I +G H+L ++ VYLL+PGLFSNHGPLYFV T
Sbjct: 172 DDIGWLQRAPEMPPVEDGTDRFNKILEDIGHGVHRLPNTVVYLLVPGLFSNHGPLYFVDT 231

Query: 61  KRCFSKMGLACHIAKIHSEASVEHNACELKHYIEELYWGSGKRVMLLGHSKGGVDAAAAL 120
           K  FSKMGLACHIAKIHSE+SVE NA E+K YIEEL WGS KRV+LLGHSKGG+DAAAAL
Sbjct: 232 KTKFSKMGLACHIAKIHSESSVEKNAREIKEYIEELCWGSNKRVLLLGHSKGGIDAAAAL 291

Query: 121 SLYWSDLKDKVAGLALVQSPYGGSPVASDILREGQIADK-ETRKIMELLICKFIKGDIRA 179
           SLYW +LKDKVAGL L QSPYGGSP+A+DILREGQ+ D    RK+ME+LI K IKGDI+A
Sbjct: 292 SLYWPELKDKVAGLVLAQSPYGGSPIATDILREGQLGDYVNLRKMMEILISKVIKGDIQA 351

Query: 180 LEDLTYDKRREFIMNHKLPEQIPLISFHSEASIAPGVIATMTQIAHAELPWLPLPKLGFE 239
           LEDLTY++R+EF+ NH LP ++P +SF +EASI+P V++T++ +AHAELP          
Sbjct: 352 LEDLTYERRKEFLKNHPLPRELPTVSFRTEASISPAVLSTLSHVAHAELP---------- 401

Query: 240 EPDSVVQAGRKVPVVIPLSAAMAVSALHLQLRYGEKSDGLVTCRDAEVPGSVVVRPDRKL 299
               +     K+PVV+PL AAMA  A  LQ+RYGEKSDGLVTC DAEVPGSVVVRP RKL
Sbjct: 402 ----LTNQAAKLPVVMPLGAAMAACAQLLQVRYGEKSDGLVTCCDAEVPGSVVVRPKRKL 457

Query: 300 DHAWMVYSSGKKDPNEPDCSEMCEALLTMLVELGMIKEE 338
           DHAWMVYSS  + P E D +++CEALLT+LV++   +++
Sbjct: 458 DHAWMVYSSLNEVPLEADAAQVCEALLTLLVQVEQERQQ 496


>AT2G44970.2 | Symbols:  | lipase-related | chr2:18548999-18552019
           REVERSE
          Length = 502

 Score =  455 bits (1170), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/339 (65%), Positives = 267/339 (78%), Gaps = 15/339 (4%)

Query: 1   DDIGWVQRTPRMAPVEDGTARFLDLLNKIRNGEHKLQDSFVYLLIPGLFSNHGPLYFVGT 60
           DDIGW+QR P M PVEDGT RF  +L  I +G H+L ++ VYLL+PGLFSNHGPLYFV T
Sbjct: 171 DDIGWLQRAPEMPPVEDGTDRFNKILEDIGHGVHRLPNTVVYLLVPGLFSNHGPLYFVDT 230

Query: 61  KRCFSKMGLACHIAKIHSEASVEHNACELKHYIEELYWGSGKRVMLLGHSKGGVDAAAAL 120
           K  FSKMGLACHIAKIHSE+SVE NA E+K YIEEL WGS KRV+LLGHSKGG+DAAAAL
Sbjct: 231 KTKFSKMGLACHIAKIHSESSVEKNAREIKEYIEELCWGSNKRVLLLGHSKGGIDAAAAL 290

Query: 121 SLYWSDLKDKVAGLALVQSPYGGSPVASDILREGQIADK-ETRKIMELLICKFIKGDIRA 179
           SLYW +LKDKVAGL L QSPYGGSP+A+DILREGQ+ D    RK+ME+LI K IKGDI+A
Sbjct: 291 SLYWPELKDKVAGLVLAQSPYGGSPIATDILREGQLGDYVNLRKMMEILISKVIKGDIQA 350

Query: 180 LEDLTYDKRREFIMNHKLPEQIPLISFHSEASIAPGVIATMTQIAHAELPWLPLPKLGFE 239
           LEDLTY++R+EF+ NH LP ++P +SF +EASI+P V++T++ +AHAELP          
Sbjct: 351 LEDLTYERRKEFLKNHPLPRELPTVSFRTEASISPAVLSTLSHVAHAELP---------- 400

Query: 240 EPDSVVQAGRKVPVVIPLSAAMAVSALHLQLRYGEKSDGLVTCRDAEVPGSVVVRPDRKL 299
               +     K+PVV+PL AAMA  A  LQ+RYGEKSDGLVTC DAEVPGSVVVRP RKL
Sbjct: 401 ----LTNQAAKLPVVMPLGAAMAACAQLLQVRYGEKSDGLVTCCDAEVPGSVVVRPKRKL 456

Query: 300 DHAWMVYSSGKKDPNEPDCSEMCEALLTMLVELGMIKEE 338
           DHAWMVYSS  + P E D +++CEALLT+LV++   +++
Sbjct: 457 DHAWMVYSSLNEVPLEADAAQVCEALLTLLVQVEQERQQ 495