Jatropha Genome Database
- JcCB0428641.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0428641.10 - phase: 1 /partial
(269 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-R... 110 7e-25
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 89 3e-18
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 89 4e-18
AT2G46670.1 | Symbols: | pseudo-response regulator, putative / ... 89 4e-18
AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS PSEUDO-R... 87 1e-17
AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE REGUL... 85 6e-17
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB E... 71 9e-13
AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type) f... 57 1e-08
AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type) f... 57 2e-08
AT1G49130.1 | Symbols: | zinc finger (B-box type) family protei... 57 2e-08
AT1G49130.2 | Symbols: | zinc finger (B-box type) family protei... 56 2e-08
AT1G73870.1 | Symbols: | zinc finger (B-box type) family protei... 56 3e-08
AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3); pr... 55 6e-08
AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543 REVERSE 55 6e-08
AT1G68520.1 | Symbols: | zinc finger (B-box type) family protei... 54 7e-08
AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS... 54 1e-07
AT1G25440.1 | Symbols: | zinc finger (B-box type) family protei... 54 1e-07
AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 53 2e-07
AT1G28050.1 | Symbols: | zinc finger (B-box type) family protei... 53 2e-07
AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1); tr... 52 4e-07
AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2); transcript... 52 5e-07
AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription fac... 52 6e-07
AT1G07050.1 | Symbols: | CONSTANS-like protein-related | chr1:2... 51 6e-07
AT2G47890.1 | Symbols: | zinc finger (B-box type) family protei... 50 1e-06
AT2G33500.2 | Symbols: | zinc finger (B-box type) family protei... 50 2e-06
AT2G33500.1 | Symbols: | zinc finger (B-box type) family protei... 50 2e-06
AT5G41380.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 4e-06
AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9); transcript... 48 6e-06
AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9); transcript... 48 6e-06
AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9); transcript... 48 6e-06
AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9); transcript... 48 6e-06
>AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator | chr5:8356204-8358873
REVERSE
Length = 667
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 81/126 (64%), Gaps = 28/126 (22%)
Query: 136 LQKQDHKLDSLEDRGHISAATDHSATSSFCNVSATHLNMGYGSTSGSNSNVDQAAIIRTT 195
LQ +D +D +++R ++S+AT+HSA +++DQ
Sbjct: 565 LQDRDCSMD-VDERRYVSSATEHSAI---------------------GNHIDQLI----- 597
Query: 196 SERKNEGGILHNDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQ 255
E+KNE G + +++QREAALTKFR+KRKDRCYEKKVRYESRKKLAEQRPR+KGQ
Sbjct: 598 -EKKNEDGYSLSVGKIQQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQ 656
Query: 256 FVRQVQ 261
FVRQVQ
Sbjct: 657 FVRQVQ 662
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19232874-19234901 FORWARD
Length = 468
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/45 (88%), Positives = 43/45 (95%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
QREAAL KFRLKRKDRC++KKVRY+SRKKLAEQRPRVKGQFVR V
Sbjct: 416 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTV 460
>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19233422-19234901 FORWARD
Length = 351
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/45 (88%), Positives = 43/45 (95%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
QREAAL KFRLKRKDRC++KKVRY+SRKKLAEQRPRVKGQFVR V
Sbjct: 299 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTV 343
>AT2G46670.1 | Symbols: | pseudo-response regulator, putative /
timing of CAB expression 1-like protein, putative |
chr2:19164589-19165233 REVERSE
Length = 183
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/45 (88%), Positives = 43/45 (95%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
QREAAL KFRLKRKDRC++KKVRY+SRKKLAEQRPRVKGQFVR V
Sbjct: 131 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTV 175
>AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/
two-component response regulator |
chr5:24198215-24200502 REVERSE
Length = 495
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 27/169 (15%)
Query: 110 QSTLRSNSDQLYDCLGQTAKDSTSPSLQKQDHKLDSLE--------DRGHI---SAATDH 158
Q+ R+N D L G + +S +PS ++D L SLE DR + + H
Sbjct: 324 QALERNNDDTLNRSSGNSQVESKAPSSNRED--LQSLEQTLKKTREDRDYKVGDRSVLRH 381
Query: 159 SATSSFCNVSATHLNMGYGSTSGSNSNVDQ--------AAIIRTTSERKNEGGILHNDAN 210
S S+F + + N + NV+ A ++ ++S N + +
Sbjct: 382 SNLSAF----SKYNNGATSAKKAPEENVESCSPHDSPIAKLLGSSSSSDNP--LKQQSSG 435
Query: 211 SHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
S R QREAAL KFRLKRK+RC+EKKVRY SRKKLAEQRP VKGQF+R+
Sbjct: 436 SDRWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component
response regulator | chr5:638283-641461 REVERSE
Length = 727
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 46/52 (88%)
Query: 209 ANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
A+ ++ QREAALTKFR KRK+RC+ KKVRY+SRKKLAEQRPRV+GQFVR+
Sbjct: 661 ADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKT 712
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component
response regulator | chr5:24675540-24678176 FORWARD
Length = 618
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 207 NDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
N+ ++ +RE AL KFR KR RC++KK+RY +RK+LAE+RPRVKGQFVR++
Sbjct: 523 NEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKM 576
>AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 355
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 176 YGSTSGSNSNVDQAAIIRTTSERKNEGGILHNDANSHRA--IQREAALTKFRLKRKDRCY 233
YG N+N ++ R+T GG H+A + REA + ++R KRK+R +
Sbjct: 252 YGVVPDGNTN---NSVNRSTITSSTTGG-------DHQASSMDREARVLRYREKRKNRKF 301
Query: 234 EKKVRYESRKKLAEQRPRVKGQFVRQVQ 261
EK +RY SRK AE RPR+KG+F ++ +
Sbjct: 302 EKTIRYASRKAYAESRPRIKGRFAKRTE 329
>AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 406
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Query: 208 DANSHRAI-----QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
D + RA+ +REA + ++R KRK+R +EK +RY SRK AE RPR+KG+F ++
Sbjct: 325 DPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 381
>AT1G49130.1 | Symbols: | zinc finger (B-box type) family protein |
chr1:18174741-18175936 REVERSE
Length = 326
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 37/44 (84%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
+REA + ++R KRK+R +EKK+RYE RK A++RPR+KG+FVR+
Sbjct: 277 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 320
>AT1G49130.2 | Symbols: | zinc finger (B-box type) family protein |
chr1:18174741-18175811 REVERSE
Length = 319
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 37/44 (84%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
+REA + ++R KRK+R +EKK+RYE RK A++RPR+KG+FVR+
Sbjct: 270 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 313
>AT1G73870.1 | Symbols: | zinc finger (B-box type) family protein |
chr1:27779214-27780522 FORWARD
Length = 392
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQL 262
+REA + +++ KR+ R + KK+RYE RK AEQRPR+KG+FV++ L
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTSL 390
>AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding
| chr2:10566959-10567946 FORWARD
Length = 294
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
+REA + ++R KRK+R +EK +RY SRK AE RPR+KG+F ++
Sbjct: 228 EREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 271
>AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543 REVERSE
Length = 394
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 36/44 (81%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
REA++ +++ KR++R + KK+RY+ RK A+QRPR+KG+FVR+
Sbjct: 340 MREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRR 383
>AT1G68520.1 | Symbols: | zinc finger (B-box type) family protein |
chr1:25709331-25710749 REVERSE
Length = 406
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 38/49 (77%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQLPIS 265
REA ++++R KR+ R + KK+RYE RK AE+RPR+KG+FV++ + ++
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSSIGVA 405
>AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763
FORWARD
Length = 435
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 35/43 (81%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
REA++ +++ KR+ R + KK+RY+ RK A+QRPR+KG+FVR+
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425
>AT1G25440.1 | Symbols: | zinc finger (B-box type) family protein |
chr1:8933939-8935284 REVERSE
Length = 417
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
REA ++++R KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403
>AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: CCT domain
(InterPro:IPR010402); BEST Arabidopsis thaliana protein
match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits to
1506 proteins in 139 species: Archae - 0; Bacteria - 8;
Metazoa - 291; Fungi - 53; Plants - 1145; Viruses - 0;
Other Eukaryotes - 318 (source: NCBI BLink). |
chr5:4632147-4633651 REVERSE
Length = 339
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 36/43 (83%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
REA+L +++ KR++R + K++RY+ RK AE+RPRVKG+FV++
Sbjct: 294 REASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
>AT1G28050.1 | Symbols: | zinc finger (B-box type) family protein |
chr1:9775768-9777657 REVERSE
Length = 433
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 176 YGSTSGSNSNVDQAAIIRTTSERKNEGGILHNDANSHRAIQ-REAALTKFRLKRKDRCYE 234
+GS GSNS+ D ++ A+ R Q R A+ +++ KRK R Y+
Sbjct: 343 FGSEKGSNSSSDLHFTEHIAGTSCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRRYD 402
Query: 235 KKVRYESRKKLAEQRPRVKGQFVRQVQLP 263
K +RYESRK A+ R RV+G+FV+ + P
Sbjct: 403 KTIRYESRKARADTRLRVRGRFVKASEAP 431
>AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding |
chr5:5176297-5177473 REVERSE
Length = 355
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
REA + ++R K+K R +EK +RY SRK AE+RPR+KG+F ++
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328
>AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2); transcription
factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 347
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 215 IQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
++REA + ++R K+K R ++K +RY SRK AE RPR+KG+F ++
Sbjct: 276 MEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320
>AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 215 IQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
+ REA + ++R KRK R +EK +RY SRK AE RPRV G+F ++
Sbjct: 304 MDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
>AT1G07050.1 | Symbols: | CONSTANS-like protein-related |
chr1:2164327-2165133 REVERSE
Length = 195
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 37/47 (78%)
Query: 213 RAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
R ++REA++ +++ KR+ R + KK+RY+ RK A++RPR KG+FV++
Sbjct: 147 RNMRREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
>AT2G47890.1 | Symbols: | zinc finger (B-box type) family protein |
chr2:19608245-19609476 FORWARD
Length = 332
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 35/45 (77%)
Query: 214 AIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVR 258
+++R +AL++++ K+K R YEK +RYESRK AE R R++G+F +
Sbjct: 284 SLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
>AT2G33500.2 | Symbols: | zinc finger (B-box type) family protein |
chr2:14188159-14190046 REVERSE
Length = 401
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 192 IRTTSERKNEGGILHNDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPR 251
I TS R + N A R+ A+ +++ K+K R Y+K +RYE+RK AE R R
Sbjct: 331 IAITSNRATRLVAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLR 390
Query: 252 VKGQFVR 258
VKG+FV+
Sbjct: 391 VKGRFVK 397
>AT2G33500.1 | Symbols: | zinc finger (B-box type) family protein |
chr2:14188159-14190046 REVERSE
Length = 402
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 192 IRTTSERKNEGGILHNDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPR 251
I TS R + N A R+ A+ +++ K+K R Y+K +RYE+RK AE R R
Sbjct: 332 IAITSNRATRLVAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLR 391
Query: 252 VKGQFVR 258
VKG+FV+
Sbjct: 392 VKGRFVK 398
>AT5G41380.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G63820.1); Has 952 Blast hits to 949 proteins
in 72 species: Archae - 0; Bacteria - 0; Metazoa - 12;
Fungi - 2; Plants - 890; Viruses - 0; Other Eukaryotes -
48 (source: NCBI BLink). | chr5:16562129-16563553
REVERSE
Length = 307
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 212 HRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ---VQLP 263
+ A +R+ ++K+R KR R + K ++Y RK LA+ RPR++G+F R V++P
Sbjct: 210 YSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARNDEVVEIP 264
>AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9); transcription
factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 372
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 207 NDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVR 258
N+A SH ++ R A+ +++ K+K R ++K+VRY SRK A+ R RVKG+FV+
Sbjct: 306 NNACSH-SVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
>AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9); transcription
factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 372
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 207 NDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVR 258
N+A SH ++ R A+ +++ K+K R ++K+VRY SRK A+ R RVKG+FV+
Sbjct: 306 NNACSH-SVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
>AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9); transcription
factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 372
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 207 NDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVR 258
N+A SH ++ R A+ +++ K+K R ++K+VRY SRK A+ R RVKG+FV+
Sbjct: 306 NNACSH-SVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
>AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9); transcription
factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 372
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 207 NDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVR 258
N+A SH ++ R A+ +++ K+K R ++K+VRY SRK A+ R RVKG+FV+
Sbjct: 306 NNACSH-SVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356