Jatropha Genome Database
- JcCB0425011.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0425011.10 + phase: 0
(555 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 582 e-166
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 331 8e-91
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 314 8e-86
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 305 5e-83
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 302 4e-82
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 298 7e-81
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 2e-78
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 288 8e-78
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 287 1e-77
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 287 1e-77
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 8e-77
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 1e-75
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 4e-75
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 278 7e-75
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 278 9e-75
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 3e-74
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 5e-74
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 274 1e-73
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 3e-73
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 271 7e-73
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 270 2e-72
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 2e-72
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 269 4e-72
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 5e-72
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 8e-72
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 268 8e-72
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 266 2e-71
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 266 4e-71
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 4e-71
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 5e-71
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 5e-71
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 9e-71
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 1e-70
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 263 2e-70
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 2e-70
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 3e-70
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 3e-70
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 3e-70
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 1e-69
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 1e-69
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 2e-69
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 2e-69
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 3e-69
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 5e-69
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 5e-69
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 9e-69
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 1e-68
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 257 1e-68
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 1e-68
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 2e-68
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 2e-68
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 1e-67
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 3e-67
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 3e-67
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 252 5e-67
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 2e-66
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 3e-66
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 1e-65
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 247 1e-65
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 2e-65
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 2e-65
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 245 5e-65
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 245 6e-65
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 2e-64
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 2e-64
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 2e-64
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 2e-64
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 1e-63
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 3e-63
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 5e-63
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 6e-63
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 8e-63
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 9e-63
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 9e-63
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 238 1e-62
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 1e-62
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 1e-62
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 2e-62
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 2e-62
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 3e-62
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 3e-62
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 3e-62
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 3e-62
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 4e-62
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 5e-62
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 6e-62
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 2e-61
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 3e-61
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 3e-61
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 4e-61
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 4e-61
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 5e-61
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 7e-61
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 8e-61
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 8e-61
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 2e-60
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 2e-60
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 3e-60
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 4e-60
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 6e-60
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 228 1e-59
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 4e-59
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 4e-59
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 5e-59
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 5e-59
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 7e-59
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 7e-59
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 7e-59
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 7e-59
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 7e-59
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 224 1e-58
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 223 4e-58
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 223 4e-58
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 5e-58
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 5e-58
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 2e-57
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 2e-57
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 2e-57
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 3e-57
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 3e-57
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 9e-57
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 2e-56
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 2e-56
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 2e-56
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 216 3e-56
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 215 5e-56
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 215 6e-56
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 2e-55
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 9e-55
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 1e-54
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 210 2e-54
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 4e-54
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 5e-54
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 206 3e-53
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 2e-52
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 204 2e-52
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 2e-52
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 203 3e-52
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 3e-52
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 8e-52
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 2e-51
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 3e-51
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 3e-51
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 5e-51
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 199 5e-51
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 8e-51
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 2e-50
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 195 6e-50
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 194 1e-49
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 2e-49
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 193 2e-49
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 193 2e-49
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 193 3e-49
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 7e-49
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 8e-49
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 191 1e-48
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 2e-48
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 190 2e-48
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 3e-48
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 4e-48
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 6e-48
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 6e-48
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 2e-47
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 3e-47
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 2e-46
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 2e-46
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 3e-46
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 183 3e-46
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 6e-46
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 7e-43
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 5e-42
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 5e-42
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 162 4e-40
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 3e-39
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 7e-39
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 6e-38
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 2e-34
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 103 4e-22
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 7e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 94 2e-19
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 5e-19
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 92 9e-19
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 90 3e-18
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 88 1e-17
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 87 3e-17
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-17
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 83 5e-16
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 83 5e-16
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 82 8e-16
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 82 8e-16
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 82 9e-16
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 78 2e-14
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 77 3e-14
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 77 3e-14
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-14
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 76 7e-14
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 73 6e-13
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 70 5e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 7e-12
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 69 1e-11
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 69 1e-11
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 68 1e-11
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 67 2e-11
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 65 2e-10
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 64 2e-10
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 62 1e-09
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 62 1e-09
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 2e-09
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 60 5e-09
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 55 1e-07
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 2e-07
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 54 2e-07
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 2e-07
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 54 2e-07
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 54 3e-07
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 54 3e-07
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 51 2e-06
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 49 7e-06
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 582 bits (1501), Expect = e-166, Method: Compositional matrix adjust.
Identities = 286/543 (52%), Positives = 381/543 (70%), Gaps = 2/543 (0%)
Query: 8 LLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQR 67
++ E T+ QTR T++LH+ + +S L+ + ++AT++ RFYALNDDLISA LFD P+R
Sbjct: 10 IIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPER 69
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
S+FLWNS+IRA+AKAH+F LS ++++LR++T+PDNFTYACL RG E+FD GLR +H
Sbjct: 70 SVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIH 129
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWG 187
AYSK + EASK+F I + DL L N MI GY CGFW
Sbjct: 130 GIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWD 189
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
KG+ LFN M+ G QP+ +T+V L SGL+D SLL + +H CLK D ++YVG AL
Sbjct: 190 KGINLFNLMQHRG-HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCAL 248
Query: 248 VNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADP 307
VNMYSR C+ SA VF + +PDLVA S+LITG+ +C ++K+AL + L ++GKK D
Sbjct: 249 VNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDC 308
Query: 308 ILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFEN 367
+L+A +L + A+L+D G E+H YV+R GLE +I V SALIDMY KCG + + +F
Sbjct: 309 VLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAG 368
Query: 368 MRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDG 427
+ +NIVS+NS+I GLGLHG A+ AF+ F E+LE GL PDE T S LLC CCH+GL+ G
Sbjct: 369 IPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKG 428
Query: 428 QEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCD 487
QEIF RM EF I P+TEHY+++VKL+GMAG+LEEA+ FV+SL +P+DSGI GALLSCC+
Sbjct: 429 QEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCE 488
Query: 488 VHGNTELAEIVSQQLFDN-EPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPG 546
VH NT LAE+V++ + N E R+ YKVMLSN+YA GRWD+V+R RD I K+PG
Sbjct: 489 VHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPG 548
Query: 547 LSW 549
+SW
Sbjct: 549 ISW 551
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 331 bits (848), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 287/528 (54%), Gaps = 2/528 (0%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
QLH L++ S + E +L Y+ A LF + WN MI + ++
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
+E+L+F+ +M+ + PD T++ L+ + +L+ + +H
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
AY K VS A +FS D+V+ AMISGY + G + L++F + ++ K
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV-KIS 438
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
P+ TLV ++ + L +G+ +HG +K GFD +G A+++MY++ MN AY +
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 264 FIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
F L + D+V+W+++IT Q ++ A+ +R + V+G D + I++ L A A L
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
G IHG++++H L S++ S LIDMY KCG + + VF+ M+ +NIVS+NS+I+
Sbjct: 559 SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAAC 618
Query: 384 GLHGLAAQAFKLFEEMLEK-GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
G HG + LF EM+EK G++PD+ T ++ +CCH G V +G FR M +++ I P
Sbjct: 619 GNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQP 678
Query: 443 RTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQL 502
+ EHY +V L G AG L EAY V S+ P D+G+WG LL C +H N ELAE+ S +L
Sbjct: 679 QQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKL 738
Query: 503 FDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
D +P Y V++SN +A+ W+ V + R + +K+PG SWI
Sbjct: 739 MDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 247/505 (48%), Gaps = 14/505 (2%)
Query: 4 KFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDK 63
+ S LLQ + + R + KQ+HA ++ + +S +S+ +IL YA+ +F +
Sbjct: 37 RLSLLLQACSNPNLLR-QGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR 95
Query: 64 TPQR--SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLD 121
R SI WNS+I +F + ++AL+FY KML PD T+ CL++ C +
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK 155
Query: 122 GLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYS 181
G+ L AY ++ + SK+F + ++D V+ N M++GY+
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 182 YCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNA 241
CG ++ F+ MR + + P+ T ++S L+ +G +HGL + SG D
Sbjct: 216 KCGALDSVIKGFSVMR-MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 242 YVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVA 301
+ ++L++MYS+ + A +F + + D V W+ +I+G++Q +++L F+ + +
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLG 361
G D I +SLL + ++ ++ +IH Y++RH + +I ++SALID Y KC V +
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 362 ILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHA 421
+F + ++V + ++ISG +GL + ++F +++ + P+E TL +L
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 422 GLVKDGQE----IFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG 477
+K G+E I ++ D C ++ + G + AY + + D
Sbjct: 455 LALKLGRELHGFIIKKGFDNRC-----NIGCAVIDMYAKCGRMNLAYE-IFERLSKRDIV 508
Query: 478 IWGALLSCCDVHGNTELAEIVSQQL 502
W ++++ C N A + +Q+
Sbjct: 509 SWNSMITRCAQSDNPSAAIDIFRQM 533
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 288 YKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSA 347
YKK+L RN S ++ P ++ LL A + +R G ++H +++ + + +
Sbjct: 17 YKKSLPL-RNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDER 75
Query: 348 LIDMYLKCG-FVGLGILVFE-NMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLK 405
++ MY CG F G + + ++R +I +NS+IS +GL QA + +ML G+
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 406 PDESTLSGLLCAC 418
PD ST L+ AC
Sbjct: 136 PDVSTFPCLVKAC 148
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 314 bits (805), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 294/551 (53%), Gaps = 13/551 (2%)
Query: 7 SLLQELTKSH---QTRSRTKQLHALILRSH-LSHESFYATKILRFYALNDDLISAYNLFD 62
+L++ L K+ +++S+ KQLHA +R+ LSH S A+ ++ Y L A LF
Sbjct: 6 ALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS--ASIVISIYTNLKLLHEALLLFK 63
Query: 63 KTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDG 122
+ W S+IR F F +AL+ + +M + PD+ + +++ C DL
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 123 LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
+H Y+K + +VF + +D+V N +I+GY+
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQ 183
Query: 183 CGFWGKGLQLFNGMREIGKQ--QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCN 240
G + L++ +RE+G +PD FTL ++ ++ + G+ IHG ++ G D +
Sbjct: 184 SGMYEDALRM---VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSD 240
Query: 241 AYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSV 300
Y+GS+LV+MY++ + + VF LY D ++W++L+ G++Q Y +AL +R +
Sbjct: 241 VYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT 300
Query: 301 AGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGL 360
A K + +S++ A A L + LG ++HGYVLR G SNI ++SAL+DMY KCG +
Sbjct: 301 AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKA 360
Query: 361 GILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCH 420
+F+ M + VS+ ++I G LHG +A LFEEM +G+KP++ +L AC H
Sbjct: 361 ARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH 420
Query: 421 AGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWG 480
GLV + F M + + EHY + LLG AG+LEEAYNF+ + +W
Sbjct: 421 VGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWS 480
Query: 481 ALLSCCDVHGNTELAEIVSQQLFD-NEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNV 539
LLS C VH N ELAE V++++F + GAY V++ N+YAS+GRW ++ + R +
Sbjct: 481 TLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY-VLMCNMYASNGRWKEMAKLRLRMRKK 539
Query: 540 GARKMPGLSWI 550
G RK P SWI
Sbjct: 540 GLRKKPACSWI 550
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 288/530 (54%), Gaps = 4/530 (0%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+QLH IL+S + ++ FY N + SA +FD+ +R + WNS+I +
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
++ LS + +ML + + D T + GC ++ + R +H
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
YSK + A VF + +R +V +MI+GY+ G G+ ++LF M E G
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-I 393
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
PD +T+ +++ + LL G+ +H ++ + +V +AL++MY++ M A
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADP--ILIASLLVASAQL 320
VF + D+++W+ +I G+ + +AL + NL + K+ P +A +L A A L
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASL 512
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
+ G EIHGY++R+G S+ V+++L+DMY KCG + L ++F+++ ++++VS+ +I
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCI 440
+G G+HG +A LF +M + G++ DE + LL AC H+GLV +G F M E I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 441 PPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQ 500
P EHY IV +L G+L +AY F+ ++ P D+ IWGALL C +H + +LAE V++
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692
Query: 501 QLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++F+ EP Y V+++NIYA +W+ VKR R I G RK PG SWI
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 207/430 (48%), Gaps = 3/430 (0%)
Query: 7 SLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQ 66
S+LQ L ++ K++ I + +S +K+ Y DL A +FD+
Sbjct: 99 SVLQ-LCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKI 157
Query: 67 RSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRIL 126
WN ++ AK+ F ++ + KM+ + + D++T++C+ + + G L
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 217
Query: 127 HXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFW 186
H Y K V A KVF + ERD++ N++I+GY G
Sbjct: 218 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 187 GKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSA 246
KGL +F M + + D T+V + +G D L+ +G+ +H + +K+ F +
Sbjct: 278 EKGLSVFVQML-VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 336
Query: 247 LVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKAD 306
L++MYS+ ++SA VF + +V+++++I G+ + +A+ + + G D
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 307 PILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFE 366
+ ++L A+ + G +H ++ + L +I VS+AL+DMY KCG + LVF
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 367 NMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML-EKGLKPDESTLSGLLCACCHAGLVK 425
MR ++I+S+N++I G + A +A LF +L EK PDE T++ +L AC
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 426 DGQEIFRRMM 435
G+EI +M
Sbjct: 517 KGREIHGYIM 526
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 174/378 (46%), Gaps = 7/378 (1%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
D + + FD RS+ N+ +R F ++ + A+ + + P T +++
Sbjct: 49 DCVDSITTFD----RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQ 102
Query: 113 GCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVL 172
C ++ L + + Y+ + EAS+VF + +
Sbjct: 103 LCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALF 162
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLC 232
N +++ + G + + LF M G + D +T + + G+ +HG
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEM-DSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 233 LKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL 292
LKSGF VG++LV Y + + ++SA VF + + D+++W+++I G++ +K L
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 293 FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMY 352
+ + V+G + D I S+ A + LG +H ++ + L+DMY
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 353 LKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
KCG + VF M +R++VSY S+I+G GLA +A KLFEEM E+G+ PD T++
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 413 GLLCACCHAGLVKDGQEI 430
+L C L+ +G+ +
Sbjct: 402 AVLNCCARYRLLDEGKRV 419
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 280/532 (52%), Gaps = 5/532 (0%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQ+HA ILR L ++ ++ Y +I+A+ LF+ P ++I W +++ + +
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
EA+ + M + KPD + + ++ C L +H
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGF-WG--KGLQLFNGMREI 199
Y+K +++A KVF D+VL NAMI GYS G W + L +F MR
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR-F 447
Query: 200 GKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
+P T V L+ + LG+ + IHGL K G + + + GSAL+++YS C+
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
+ VF + DLV W+++ G++Q + ++AL + L ++ ++ D A+++ A+
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
L V+LG E H +L+ GLE N +++AL+DMY KCG F++ +R++V +NSV
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
IS HG +A ++ E+M+ +G++P+ T G+L AC HAGLV+DG + F M+ F
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFG 686
Query: 440 IPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVS 499
I P TEHY+ +V LLG AG L +A + + + +W +LLS C GN ELAE +
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAA 746
Query: 500 QQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIG 551
+ ++P+ MLSNIYAS G W + K+ R+ + G K PG SWIG
Sbjct: 747 EMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIG 798
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 226/479 (47%), Gaps = 14/479 (2%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
QL + +++S + + T ++ FY + ++ A +FD P++S W +MI K
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
+ +L + +++ PD + + ++ C L+G + +H
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
+Y K V A K+F+G+ ++++ ++SGY + ++LF M + G +
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LK 347
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
PD + +++ LG G +H +K+ ++YV ++L++MY++ C+ A V
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 264 FIGLYQPDLVAWSALITGFLQCE---DYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
F D+V ++A+I G+ + + +AL +R++ + + SLL ASA L
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
T + L +IHG + ++GL +I SALID+Y C + LVF+ M+ +++V +NS+
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQE----IFRRMMD 436
+G +A LF E+ +PDE T + ++ A + V+ GQE + +R ++
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
C P T + + G + +A++ S D W +++S HG + A
Sbjct: 588 --CNPYITNALLDMYAKCGSPEDAHKAFDSAASR----DVVCWNSVISSYANHGEGKKA 640
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 145/278 (52%), Gaps = 6/278 (2%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFT 208
YS+ + A KVF + ER+LV + M+S ++ G + + L +F K P+ +
Sbjct: 89 YSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYI 148
Query: 209 LVGLI---SGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFI 265
L I SGL + Q + +KSGFD + YVG+ L++ Y + ++ A VF
Sbjct: 149 LSSFIQACSGLDGRGRWMVFQ-LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFD 207
Query: 266 GLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRL 325
L + V W+ +I+G ++ +L + L D +++++L A + L +
Sbjct: 208 ALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG 267
Query: 326 GTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGL 385
G +IH ++LR+GLE + + + LID Y+KCG V +F M N+NI+S+ +++SG
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 386 HGLAAQAFKLFEEMLEKGLKPDESTLSGLL--CACCHA 421
+ L +A +LF M + GLKPD S +L CA HA
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 107/206 (51%), Gaps = 3/206 (1%)
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCED 287
+HG + G + + Y+ + L+N+YSR M A VF + + +LV+WS +++
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 288 YKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVR---LGTEIHGYVLRHGLESNIIV 344
Y+++L + K + I S + + D R + ++ ++++ G + ++ V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
+ LID YLK G + LVF+ + ++ V++ ++ISG G + + +LF +++E +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEI 430
PD LS +L AC ++ G++I
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQI 271
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 298 bits (762), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 307/619 (49%), Gaps = 72/619 (11%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
S F+ LL KS + + +HA +++S S+E F +++ Y+ L +F
Sbjct: 19 SSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 62 DKTPQRSIFLWNS-------------------------------MIRAFAKAHKFDEALS 90
DK PQR+I+ WNS M+ FA+ + +EAL
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 91 FYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYS 150
++A M + + +++A ++ C D++ +H YS
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 198
Query: 151 KFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLV 210
K +V++A +VF + +R++V N++I+ + G + L +F M E + +PD TL
Sbjct: 199 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE-SRVEPDEVTLA 257
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSG-FDCNAYVGSALVNMY---SRFK----------- 255
+IS S + +GQ +HG +K+ + + +A V+MY SR K
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 256 -------CMNSAYGV----------FIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNL 298
M S Y + F + + ++V+W+ALI G+ Q + ++AL + L
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 299 SVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL------ESNIIVSSALIDMY 352
A++L A A L ++ LG + H +VL+HG E +I V ++LIDMY
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 353 LKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
+KCG V G LVF M R+ VS+N++I G +G +A +LF EMLE G KPD T+
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL-M 471
G+L AC HAG V++G+ F M +F + P +HY +V LLG AG LEEA + + + M
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Query: 472 QPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKR 531
QP DS IWG+LL+ C VH N L + V+++L + EP V+LSN+YA G+W+DV
Sbjct: 558 QP-DSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616
Query: 532 TRDNIVNVGARKMPGLSWI 550
R ++ G K PG SWI
Sbjct: 617 VRKSMRKEGVTKQPGCSWI 635
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 282/548 (51%), Gaps = 8/548 (1%)
Query: 7 SLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQ 66
S L S +++ KQ+HA +L L F TK++ + D+ A +FD P+
Sbjct: 22 SFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 67 RSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRIL 126
IF WN++IR +++ + F +AL Y+ M PD+FT+ L++ C L R +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 127 HXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIF--ERDLVLCNAMISGYSYCG 184
H Y+K + A VF G+ ER +V A++S Y+ G
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
+ L++F+ MR++ +PD LV +++ L G+ IH +K G + +
Sbjct: 202 EPMEALEIFSQMRKM-DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
+L MY++ + +A +F + P+L+ W+A+I+G+ + ++A+ + + +
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILV 364
D I I S + A AQ+ + ++ YV R ++ +SSALIDM+ KCG V LV
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380
Query: 365 FENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV 424
F+ +R++V ++++I G GLHG A +A L+ M G+ P++ T GLL AC H+G+V
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Query: 425 KDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG--IWGAL 482
++G F RM D I P+ +HY ++ LLG AG L++AY + + PV G +WGAL
Sbjct: 441 REGWWFFNRMADHK-INPQQQHYACVIDLLGRAGHLDQAYEVIKCM--PVQPGVTVWGAL 497
Query: 483 LSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGAR 542
LS C H + EL E +QQLF +P + V LSN+YA+ WD V R + G
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 543 KMPGLSWI 550
K G SW+
Sbjct: 558 KDVGCSWV 565
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 271/546 (49%), Gaps = 18/546 (3%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQ+HA LR SF ++ Y L S+ L R + WN+++ + +
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ EAL + +M+ +PD FT + ++ C L + LH
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 143 XXXXT-AYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
Y V +VF G+F+R + L NAMI+GYS + L LF GM E
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
+ T+ G++ + + IHG +K G D + +V + L++MYSR ++ A
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNL-----------SVAGKKADPILI 310
+F + DLV W+ +ITG++ E ++ AL + S K + I +
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 311 ASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN 370
++L + A L+ + G EIH Y +++ L +++ V SAL+DMY KCG + + VF+ +
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580
Query: 371 RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+N++++N +I G+HG +A L M+ +G+KP+E T + AC H+G+V +G I
Sbjct: 581 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
Query: 431 FRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVD---SGIWGALLSCCD 487
F M ++ + P ++HY +V LLG AG ++EAY L M P D +G W +LL
Sbjct: 641 FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ--LMNMMPRDFNKAGAWSSLLGASR 698
Query: 488 VHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGL 547
+H N E+ EI +Q L EP ++ V+L+NIY+S G WD R N+ G RK PG
Sbjct: 699 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGC 758
Query: 548 SWIGGG 553
SWI G
Sbjct: 759 SWIEHG 764
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 205/428 (47%), Gaps = 25/428 (5%)
Query: 23 KQLHALILRSHLSHESF-YATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
KQ+HA + + +S A ++ Y D + Y +FD+ +R+ WNS+I +
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGL---RILHXXXXXXXXXXX 138
K++ AL + ML +P +FT ++ C +GL + +H
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH-AYGLRKGELN 235
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGIF-ERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
Y K ++ +SKV G F RDLV N ++S S C + L+ +R
Sbjct: 236 SFIINTLVAMYGKLGKLA-SSKVLLGSFGGRDLVTWNTVLS--SLCQN-EQLLEALEYLR 291
Query: 198 EIGKQ--QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG-FDCNAYVGSALVNMYSRF 254
E+ + +PD FT+ ++ +L G+ +H LK+G D N++VGSALV+MY
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 255 KCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNL-SVAGKKADPILIASL 313
K + S VF G++ + W+A+I G+ Q E K+AL + + AG A+ +A +
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 314 LVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNI 373
+ A + IHG+V++ GL+ + V + L+DMY + G + + + +F M +R++
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 374 VSYNSVISG-----------LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAG 422
V++N++I+G L LH + K+ + LKP+ TL +L +C
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 423 LVKDGQEI 430
+ G+EI
Sbjct: 532 ALAKGKEI 539
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 179/364 (49%), Gaps = 12/364 (3%)
Query: 67 RSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLD-GLRI 125
RS W ++R+ +++ EA+ Y M+ KPDN+ + L++ + D++ G +I
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGF 185
Y K KVF I ER+ V N++IS S C F
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS--SLCSF 177
Query: 186 --WGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSL---LGIGQGIHGLCLKSGFDCN 240
W L+ F M + +P FTLV +++ + + L +G+ +H L+ G + N
Sbjct: 178 EKWEMALEAFRCMLD-ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELN 235
Query: 241 AYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSV 300
+++ + LV MY + + S+ + DLV W+ +++ Q E +AL + R + +
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 301 AGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG-LESNIIVSSALIDMYLKCGFVG 359
G + D I+S+L A + L +R G E+H Y L++G L+ N V SAL+DMY C V
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK-GLKPDESTLSGLLCAC 418
G VF+ M +R I +N++I+G + +A LF M E GL + +T++G++ AC
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 419 CHAG 422
+G
Sbjct: 416 VRSG 419
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAF 79
++ K++HA ++++L+ + + ++ YA L + +FD+ PQ+++ WN +I A+
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGC-HENFDLDGLRILH 127
EA+ M+ KP+ T+ + C H +GLRI +
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFY 642
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 282/537 (52%), Gaps = 7/537 (1%)
Query: 14 KSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWN 73
K+ +T ++H L L+ + + A ++ Y+ + +A LFD+ P R + WN
Sbjct: 161 KACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWN 220
Query: 74 SMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXX 133
+MI + ++ EAL+ + LR D+ T L+ C E D + +H
Sbjct: 221 AMISGYCQSGNAKEALTL-SNGLRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKH 276
Query: 134 XXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLF 193
Y++F + + KVF ++ RDL+ N++I Y + + LF
Sbjct: 277 GLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLF 336
Query: 194 NGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG-FDCNAYVGSALVNMYS 252
MR + + QPD TL+ L S L + + + G L+ G F + +G+A+V MY+
Sbjct: 337 QEMR-LSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 253 RFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK-KADPILIA 311
+ ++SA VF L D+++W+ +I+G+ Q +A+ Y + G+ A+
Sbjct: 396 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWV 455
Query: 312 SLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR 371
S+L A +Q +R G ++HG +L++GL ++ V ++L DMY KCG + + +F +
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV 515
Query: 372 NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIF 431
N V +N++I+ G HG +A LF+EML++G+KPD T LL AC H+GLV +GQ F
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF 575
Query: 432 RRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGN 491
M ++ I P +HY +V + G AG+LE A F+ S+ D+ IWGALLS C VHGN
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Query: 492 TELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLS 548
+L +I S+ LF+ EP Y V+LSN+YAS G+W+ V R G RK PG S
Sbjct: 636 VDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 135/519 (26%), Positives = 245/519 (47%), Gaps = 31/519 (5%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K LHA ++ S + K++ Y ++ A + FD R ++ WN MI + +A
Sbjct: 71 KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRA 130
Query: 83 HKFDEALS-FYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
E + F ML + PD T+ +++ C +DG +I H
Sbjct: 131 GNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV--IDGNKI-HCLALKFGFMWDVYV 187
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
YS++ V A +F + RD+ NAMISGY G + L L NG+R +
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-- 245
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
D T+V L+S + G IH +K G + +V + L+++Y+ F +
Sbjct: 246 ---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLT 321
VF +Y DL++W+++I + E +A+ ++ + ++ + D + + SL +QL
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 322 DVRLGTEIHGYVLRHG-LESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
D+R + G+ LR G +I + +A++ MY K G V VF + N +++S+N++I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 381 SGLGLHGLAAQAFKLFEEMLEKG-LKPDESTLSGLLCACCHAGLVKDGQEIFRRM----- 434
SG +G A++A +++ M E+G + ++ T +L AC AG ++ G ++ R+
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 435 -MDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTE 493
+D F + + Y G G LE+A + + + V+S W L++C HG+ E
Sbjct: 483 YLDVFVVTSLADMY-------GKCGRLEDALSLFYQIPR-VNSVPWNTLIACHGFHGHGE 534
Query: 494 LAEIVSQQLFDN--EPRKGAYKVMLSNIYAS----DGRW 526
A ++ +++ D +P + +LS S +G+W
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 185/470 (39%), Gaps = 55/470 (11%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
SV SLL T++ +R +H+ ++ L E F + K++ YA L +F
Sbjct: 247 SVTVVSLLSACTEAGDF-NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 62 DKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLD 121
D+ R + WNS+I+A+ + A+S + +M + +PD T L + D+
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 122 GLRILHXXXXXXXXXXXXXXXXXXXTA-YSKFSHVSEASKVFSGIFERDLVLCNAMISGY 180
R + Y+K V A VF+ + D++ N +ISGY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 181 SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCN 240
+ GF + ++++N M E G+ + T V ++ L G +HG LK+G +
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 241 AYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDY----KKALFFYR 296
+V ++L +MY + + A +F + + + V W+ LI C + +KA+ ++
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA----CHGFHGHGEKAVMLFK 541
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG 356
+ G K D I +LL A + G
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSH-----------------------------------SG 566
Query: 357 FVGLGILVFENMRNR-----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTL 411
V G FE M+ ++ Y ++ G G A K + M L+PD S
Sbjct: 567 LVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM---SLQPDASIW 623
Query: 412 SGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELE 461
LL AC G V G+ + + P +++ + + AG+ E
Sbjct: 624 GALLSACRVHGNVDLGKIASEHLFE--VEPEHVGYHVLLSNMYASAGKWE 671
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/532 (29%), Positives = 285/532 (53%), Gaps = 7/532 (1%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
Q+H +L+S + ++ Y + + AY +FD P+R++ W++++
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
+LS +++M R P+ FT++ ++ C L+ +H
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG-KQ 202
YSK ++EA KVF I +R L+ NAMI+G+ + G+ K L F M+E K+
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDC--NAYVGSALVNMYSRFKCMNSA 260
+PD FTL L+ ++ G+ IHG ++SGF C +A + +LV++Y + + SA
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
F + + +++WS+LI G+ Q ++ +A+ ++ L + D ++S++ A
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 321 TDVRLGTEIHGYVLR--HGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNS 378
+R G ++ ++ GLE++++ ++++DMYLKCG V F M+ ++++S+
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEF 438
VI+G G HGL ++ ++F EML ++PDE +L AC H+G++K+G+E+F ++++
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 444
Query: 439 CIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIV 498
I PR EHY +V LLG AG L+EA + + ++ + GIW LLS C VHG+ EL + V
Sbjct: 445 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 504
Query: 499 SQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ L + + A VM+SN+Y G W++ R+ G +K G+SW+
Sbjct: 505 GKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 556
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
G +H LKSG N + L++MY + + AY VF + + ++V+WSAL++G +
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIV 344
D K +L + + G + ++ L A L + G +IHG+ L+ G E + V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
++L+DMY KCG + VF + +R+++S+N++I+G G ++A F M E +
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 405 K--PDESTLSGLLCACCHAGLVKDGQEI 430
K PDE TL+ LL AC G++ G++I
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQI 232
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 168/540 (31%), Positives = 284/540 (52%), Gaps = 7/540 (1%)
Query: 15 SHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNS 74
S Q+ + +Q HAL+++ + + T ++ Y + +F P+R+ + W++
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 75 MIRAFAKAHKFDEALSFYAKMLRT--ETKPDNFTYACLIRGCHENFDLDGLRILHXXXXX 132
M+ +A + +EA+ + LR E ++ + ++ + R +H
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 133 XXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQL 192
T YSK ++EA K+F +R+ + +AM++GYS G + ++L
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 193 FNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYS 252
F+ M G + P +T+VG+++ D L G+ +H LK GF+ + + +ALV+MY+
Sbjct: 310 FSRMFSAGIK-PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 368
Query: 253 RFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIAS 312
+ C+ A F L + D+ W++LI+G++Q D ++AL YR + AG + +AS
Sbjct: 369 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 428
Query: 313 LLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRN 372
+L A + L + LG ++HG+ ++HG + + SAL MY KCG + G LVF N++
Sbjct: 429 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 373 IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFR 432
+VS+N++ISGL +G +A +LFEEML +G++PD+ T ++ AC H G V+ G F
Sbjct: 489 VVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFN 548
Query: 433 RMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG--IWGALLSCCDVHG 490
M D+ + P+ +HY +V LL AG+L+EA F+ S +D G +W LLS C HG
Sbjct: 549 MMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIES--ANIDHGLCLWRILLSACKNHG 606
Query: 491 NTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
EL ++L R+ + V LS IY + GR DV+R ++ G K G SWI
Sbjct: 607 KCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 207/431 (48%), Gaps = 6/431 (1%)
Query: 6 SSLLQELTKSHQTRSRT--KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDK 63
S+LL++LT Q R+ + +H I+R+ S +A ++ FYA L A+++F+
Sbjct: 15 STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNA 74
Query: 64 TPQRSIFLWNSMIRAFAKAHKFDEA---LSFYAKMLRTETKPDNFTYACLIRGCHENFDL 120
+ + WNS+I +++ + + + +M + P+ +T A + +
Sbjct: 75 IICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSS 134
Query: 121 DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGY 180
R H Y K V + KVF+ + ER+ + M+SGY
Sbjct: 135 TVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 181 SYCGFWGKGLQLFN-GMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDC 239
+ G + +++FN +RE + + ++S L +G+G+ IH + +K+G
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 240 NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
+ +ALV MYS+ + +N A +F + + WSA++TG+ Q + +A+ + +
Sbjct: 255 FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
AG K I +L A + + + G ++H ++L+ G E ++ ++AL+DMY K G +
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
F+ ++ R++ + S+ISG + +A L+ M G+ P++ T++ +L AC
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 420 HAGLVKDGQEI 430
++ G+++
Sbjct: 435 SLATLELGKQV 445
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 181/373 (48%), Gaps = 21/373 (5%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ--PDG 206
Y+K +++A +F+ I +D+V N++I+GYS G + RE+ Q P+
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 207 FTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIG 266
+TL G+ +G+ H L +K + YV ++LV MY + + VF
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 267 LYQPDLVAWSALITGFL---QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
+ + + WS +++G+ + E+ K + G +D + A L +A + V
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIY-V 237
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
LG +IH +++GL + +S+AL+ MY KC + +F++ +RN ++++++++G
Sbjct: 238 GLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGY 297
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
+G + +A KLF M G+KP E T+ G+L AC +++G++ + F +
Sbjct: 298 SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQ-----LHSFLLKLG 352
Query: 444 TEHYI----HIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVS 499
E ++ +V + AG L +A +Q D +W +L+S + + E A I+
Sbjct: 353 FERHLFATTALVDMYAKAGCLADARKG-FDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 500 QQL-----FDNEP 507
+++ N+P
Sbjct: 412 RRMKTAGIIPNDP 424
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 287/549 (52%), Gaps = 8/549 (1%)
Query: 3 VKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFD 62
+ FS L+ T+ Q K++H +++ S ++ T +L YA ++ SA+ +F+
Sbjct: 143 IVFSKALKACTEL-QDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFN 200
Query: 63 KTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDG 122
R++ W SMI + K +E L + +M + +TY LI C + L
Sbjct: 201 DITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQ 260
Query: 123 LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
+ H Y K +S A +VF+ DLV+ AMI GY++
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTH 320
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG-FDCNA 241
G + L LF M+ + + +P+ T+ ++SG L +G+ +HGL +K G +D N
Sbjct: 321 NGSVNEALSLFQKMKGV-EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN- 378
Query: 242 YVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVA 301
V +ALV+MY++ A VF + D+VAW+++I+GF Q +ALF + ++
Sbjct: 379 -VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE 437
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL--ESNIIVSSALIDMYLKCGFVG 359
+ + +ASL A A L + +G+ +H Y ++ G S++ V +AL+D Y KCG
Sbjct: 438 SVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQ 497
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
L+F+ + +N ++++++I G G G + +LFEEML+K KP+EST + +L AC
Sbjct: 498 SARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACG 557
Query: 420 HAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIW 479
H G+V +G++ F M ++ P T+HY +V +L AGELE+A + + + D +
Sbjct: 558 HTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCF 617
Query: 480 GALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNV 539
GA L C +H +L EIV +++ D P +Y V++SN+YASDGRW+ K R+ +
Sbjct: 618 GAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQR 677
Query: 540 GARKMPGLS 548
G K+ G S
Sbjct: 678 GLSKIAGHS 686
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 232/503 (46%), Gaps = 17/503 (3%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+Q H ++ + L + ATK++ Y A +FD+ P+ +LW M+R +
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ E + Y +++ + D+ ++ ++ C E DLD + +H
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH-CQLVKVPSFDNVVL 179
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y+K + A KVF+ I R++V +MI+GY +GL LFN MRE
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRE-NNV 238
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
+ +T LI S L G+ HG +KSG + ++ + ++L++MY + +++A
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARR 298
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
VF DLV W+A+I G+ +AL ++ + K + + IAS+L + +
Sbjct: 299 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIEN 358
Query: 323 VRLGTEIHGYVLRHGL-ESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVIS 381
+ LG +HG ++ G+ ++N V++AL+ MY KC VFE ++IV++NS+IS
Sbjct: 359 LELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIIS 416
Query: 382 GLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
G +G +A LF M + + P+ T++ L AC G + G + + +
Sbjct: 417 GFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLA 476
Query: 442 PRTEHY-IHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQ 500
+ H ++ G+ + A + ++ ++ W A++ G+T I S
Sbjct: 477 SSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTITWSAMIGGYGKQGDT----IGSL 531
Query: 501 QLFD------NEPRKGAYKVMLS 517
+LF+ +P + + +LS
Sbjct: 532 ELFEEMLKKQQKPNESTFTSILS 554
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/562 (28%), Positives = 282/562 (50%), Gaps = 35/562 (6%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
Q+HA + S + + S K++ FY+ + A ++ + + WN +I ++AK
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
F+E ++ Y +M+ +PD FTY +++ C E D+ R++H
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG--- 200
+ Y +F ++ A ++F +FERD V NA+I+ Y+ G W + +LF+ M G
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 201 ----------------------------KQQPDGFTLVGLISGLMDFSLLG---IGQGIH 229
+ P V +I GL SL+G +G+ IH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 230 GLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYK 289
GL + S +D V + L+ MYS+ K + A VF + L W+++I+G+ Q +
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363
Query: 290 KALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG-LESNIIVSSAL 348
+A R + VAG + + I +AS+L A++ +++ G E H Y+LR + ++ ++L
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423
Query: 349 IDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
+D+Y K G + V + M R+ V+Y S+I G G G A LF+EM G+KPD
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483
Query: 409 STLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVL 468
T+ +L AC H+ LV +G+ +F +M E+ I P +H+ +V L G AG L +A + +
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543
Query: 469 SLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDD 528
++ W LL+ C +HGNT++ + +++L + +P Y V+++N+YA+ G W
Sbjct: 544 NMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSK 603
Query: 529 VKRTRDNIVNVGARKMPGLSWI 550
+ R + ++G +K PG +WI
Sbjct: 604 LAEVRTIMRDLGVKKDPGCAWI 625
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%)
Query: 212 LISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPD 271
L+S +D G +H C+ SG + ++ + LV YS F N A +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 272 LVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHG 331
+ W+ LI + + E +++ + Y+ + G + D S+L A + DV G +HG
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 332 YVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQ 391
+ +S++ V +ALI MY + +G+ +F+ M R+ VS+N+VI+ G+ ++
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 392 AFKLFEEMLEKGLKPDESTLSGLLCACCHAG 422
AF+LF++M G++ T + + C G
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 113/270 (41%), Gaps = 20/270 (7%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K++H L + S ++ Y+ DL A +F +T + S+ WNS+I +A+
Sbjct: 300 KEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQL 359
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH-XXXXXXXXXXXXXX 141
+K +EA +ML +P++ T A ++ C +L + H
Sbjct: 360 NKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML 419
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
Y+K + A +V + +RD V ++I GY G G L LF M G
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI 479
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGI-------HGL--CLKSGFDCNAYVGSALVNMYS 252
+PD T+V ++S L+ G+ + +G+ CL+ F C +V++Y
Sbjct: 480 -KPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH-FSC-------MVDLYG 530
Query: 253 RFKCMNSAYGVFIGL-YQPDLVAWSALITG 281
R + A + + Y+P W+ L+
Sbjct: 531 RAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 270/528 (51%), Gaps = 1/528 (0%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K++H L+++S S + F T + YA + A +FD+ P+R + WN+++ +++
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
AL M KP T ++ + + +H
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y+K + A ++F G+ ER++V N+MI Y + + +F M + G
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-V 333
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
+P +++G + D L G+ IH L ++ G D N V ++L++MY + K +++A
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
+F L LV+W+A+I GF Q AL ++ + K D S++ A A+L+
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISG 382
IHG V+R L+ N+ V++AL+DMY KCG + + L+F+ M R++ ++N++I G
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
G HG A +LFEEM + +KP+ T ++ AC H+GLV+ G + F M + + I
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIEL 573
Query: 443 RTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQL 502
+HY +V LLG AG L EA++F++ + ++GA+L C +H N AE +++L
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERL 633
Query: 503 FDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
F+ P G Y V+L+NIY + W+ V + R +++ G RK PG S +
Sbjct: 634 FELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 237/491 (48%), Gaps = 8/491 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+Q+ L+ ++ L E F+ TK++ + + A +F+ + L+++M++ FAK
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
D+AL F+ +M + +P + + L++ C + +L + +H
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y+K V+EA KVF + ERDLV N +++GYS G L++ M E
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE-ENL 232
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
+P T+V ++ + L+ +G+ IHG ++SGFD + +ALV+MY++ + +A
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
+F G+ + ++V+W+++I ++Q E+ K+A+ ++ + G K + + L A A L D
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISG 382
+ G IH + GL+ N+ V ++LI MY KC V +F +++R +VS+N++I G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
+G A F +M + +KPD T ++ A + + I +M C+
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS-CLDK 471
Query: 443 RTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQL 502
+V + G + A + +M W A++ HG + A +L
Sbjct: 472 NVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHGFGKAA----LEL 526
Query: 503 FDNEPRKGAYK 513
F+ E +KG K
Sbjct: 527 FE-EMQKGTIK 536
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFA 80
R + +H L + L ++ Y ++ +A ++F K R++ WN+MI FA
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 81 KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
+ + +AL+++++M KPD FTY +I E + +H
Sbjct: 415 QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y+K + A +F + ER + NAMI GY GF L+LF M++ G
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-G 533
Query: 201 KQQPDGFTLVGLISG 215
+P+G T + +IS
Sbjct: 534 TIKPNGVTFLSVISA 548
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 256/485 (52%), Gaps = 13/485 (2%)
Query: 73 NSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGC-HENFDLDGLRILHXXXX 131
N +I++ K K +A+ ++L E+ P TY LI C H + D LR+ H
Sbjct: 50 NQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRV-HRHIL 104
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQ 191
YS V A KVF +R + + NA+ + G + L
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 192 LFNGMREIGKQQPDGFT----LVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
L+ M IG + D FT L ++ + L G+ IH + G+ + Y+ + L
Sbjct: 165 LYWKMNRIGVES-DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTL 223
Query: 248 VNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADP 307
V+MY+RF C++ A VF G+ ++V+WSA+I + + +AL +R + K + P
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 308 --ILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF 365
+ + S+L A A L + G IHGY+LR GL+S + V SAL+ MY +CG + +G VF
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343
Query: 366 ENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVK 425
+ M +R++VS+NS+IS G+HG +A ++FEEML G P T +L AC H GLV+
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 426 DGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSC 485
+G+ +F M + I P+ EHY +V LLG A L+EA V + +WG+LL
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 486 CDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMP 545
C +HGN ELAE S++LF EP+ V+L++IYA WD+VKR + + + G +K+P
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 546 GLSWI 550
G W+
Sbjct: 524 GRCWM 528
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 171/372 (45%), Gaps = 9/372 (2%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
++H IL + + F ATK++ Y+ + A +FDKT +R+I++WN++ RA A
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 84 KFDEALSFYAKMLRTETKPDNFTY-----ACLIRGCHENFDLDGLRILHXXXXXXXXXXX 138
+E L Y KM R + D FTY AC+ C N + G I H
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEI-HAHLTRRGYSSH 216
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNG-MR 197
Y++F V AS VF G+ R++V +AMI+ Y+ G + L+ F MR
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
E P+ T+V ++ + L G+ IHG L+ G D V SALV MY R +
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVAS 317
VF ++ D+V+W++LI+ + KKA+ + + G P+ S+L A
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 318 AQLTDVRLGTEIHGYVLR-HGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR-NIVS 375
+ V G + + R HG++ I + ++D+ + + + ++MR
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 376 YNSVISGLGLHG 387
+ S++ +HG
Sbjct: 457 WGSLLGSCRIHG 468
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFA 80
+ K++HA + R S + T ++ YA + A +F P R++ W++MI +A
Sbjct: 200 KGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 81 KAHKFDEALSFYAKMLRTETK---PDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
K K EAL + +M+R ETK P++ T +++ C L+ +++H
Sbjct: 260 KNGKAFEALRTFREMMR-ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDS 318
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
T Y + + +VF + +RD+V N++IS Y G+ K +Q+F M
Sbjct: 319 ILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
Query: 198 EIGKQQPDGFTLVGLI 213
G P T V ++
Sbjct: 379 ANG-ASPTPVTFVSVL 393
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/594 (29%), Positives = 290/594 (48%), Gaps = 51/594 (8%)
Query: 5 FSSLLQELTKSHQTR-----------SRTKQLHALILRSHLSHESFYATKILRFYALND- 52
FS+ Q T + ++R + KQ H ++R+ + + A+K+ AL+
Sbjct: 18 FSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSF 77
Query: 53 -DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYA---KMLRTETKPDNFTYA 108
L A +FD+ P+ + F WN++IRA+A D LS +A + ++ P+ +T+
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFP 135
Query: 109 CLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER 168
LI+ E L + LH Y + A KVF+ I E+
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 169 DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
D+V N+MI+G+ G K L+LF M E + T+VG++S L G+ +
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSR----------FKCMN-------------------- 258
++ + N + +A+++MY++ F M
Sbjct: 255 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 314
Query: 259 -SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK-KADPILIASLLVA 316
+A V + Q D+VAW+ALI+ + Q +AL + L + K + I + S L A
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
AQ+ + LG IH Y+ +HG+ N V+SALI MY KCG + VF ++ R++ +
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 434
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
+++I GL +HG +A +F +M E +KP+ T + + CAC H GLV + + +F +M
Sbjct: 435 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
+ I P +HY IV +LG +G LE+A F+ ++ P + +WGALL C +H N LAE
Sbjct: 495 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554
Query: 497 IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ +L + EPR V+LSNIYA G+W++V R ++ G +K PG S I
Sbjct: 555 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 264/533 (49%), Gaps = 1/533 (0%)
Query: 18 TRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIR 77
T + KQ+H ++ HL H++F +L+ +Y LF T +IFL+NS+I
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 78 AFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
F H F E L + + + FT+ +++ C LH
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
+ YS +++A K+F I +R +V A+ SGY+ G + + LF M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
E+G +PD + +V ++S + L G+ I + N++V + LVN+Y++ M
Sbjct: 205 EMG-VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM 263
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVAS 317
A VF + + D+V WS +I G+ K+ + + + K D I L +
Sbjct: 264 EKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSC 323
Query: 318 AQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYN 377
A L + LG + RH +N+ +++ALIDMY KCG + G VF+ M+ ++IV N
Sbjct: 324 ASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMN 383
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
+ ISGL +G +F +F + + G+ PD ST GLLC C HAGL++DG F +
Sbjct: 384 AAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCV 443
Query: 438 FCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEI 497
+ + EHY +V L G AG L++AY + + ++ +WGALLS C + +T+LAE
Sbjct: 444 YALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET 503
Query: 498 VSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V ++L EP V LSNIY+ GRWD+ RD + G +K+PG SWI
Sbjct: 504 VLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWI 556
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 283/567 (49%), Gaps = 43/567 (7%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYN--LFDKTPQRSIFLWNSMIRAFA 80
KQ+ A ++ + L + F +++++ F AL++ Y+ + +IF WN IR F+
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 81 KAHKFDEALSFYAKMLR---TETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
++ E+ Y +MLR E++PD+FTY L + C DL + H
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC---ADLRLSSLGHMILGHVLKLR 186
Query: 138 XXXXXXXXXTAYSKFS---HVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFN 194
+ F+ + A KVF RDLV N +I+GY G K + ++
Sbjct: 187 LELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 195 GMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF 254
M G +PD T++GL+S L G+ + ++G + +AL++M+S+
Sbjct: 247 LMESEG-VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKC 305
Query: 255 KCMNSAYGVFIGLYQPDLVAWSALITGFLQC----------EDYKK-------------- 290
++ A +F L + +V+W+ +I+G+ +C +D ++
Sbjct: 306 GDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSV 365
Query: 291 -------ALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
AL ++ + + K D I + L A +QL + +G IH Y+ ++ L N+
Sbjct: 366 QAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVA 425
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
+ ++L+DMY KCG + + VF ++ RN ++Y ++I GL LHG A+ A F EM++ G
Sbjct: 426 LGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAG 485
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEA 463
+ PDE T GLL ACCH G+++ G++ F +M F + P+ +HY +V LLG AG LEEA
Sbjct: 486 IAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEA 545
Query: 464 YNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASD 523
+ S+ D+ +WGALL C +HGN EL E +++L + +P V+L +Y
Sbjct: 546 DRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEA 605
Query: 524 GRWDDVKRTRDNIVNVGARKMPGLSWI 550
W+D KR R + G K+PG S I
Sbjct: 606 NMWEDAKRARRMMNERGVEKIPGCSSI 632
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 171/600 (28%), Positives = 289/600 (48%), Gaps = 71/600 (11%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFA 80
+T Q HA IL+S ++ + + K++ Y+ + A + P +I+ ++S+I A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 81 KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
KA F +++ +++M PD+ L + C E + +H
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLC--------------------------- 173
Y + + +A KVF + ++D+V C
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 174 --------NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIG 225
N ++SG++ G+ + + +F + +G PD T+ ++ + D +L +G
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC-PDQVTVSSVLPSVGDSEMLNMG 271
Query: 226 QGIHGLCLKSGFDCNAYVGSALVNMY-------------SRFKCMNSAY--GVFIGL--- 267
+ IHG +K G + V SA+++MY ++F+ M + GL
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 268 -----------------YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILI 310
+ ++V+W+++I G Q +AL +R + VAG K + + I
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 311 ASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN 370
S+L A + + G HG+ +R L N+ V SALIDMY KCG + L +VF M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 371 RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+N+V +NS+++G +HG A + +FE ++ LKPD + + LL AC GL +G +
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 431 FRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
F+ M +E+ I PR EHY +V LLG AG+L+EAY+ + + DS +WGALL+ C +
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 491 NTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
N +LAEI +++LF EP V+LSNIYA+ G W +V R+ + ++G +K PG SWI
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 271 bits (693), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 162/530 (30%), Positives = 271/530 (51%), Gaps = 5/530 (0%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
+H ILRS + + +L Y + A ++FD R + WN+MI + +
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
++AL + M+ D+ T ++ C DL+ R +H
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 145 XXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
Y K + EA VF + RD++ MI+GY+ G L+L M+ G +P
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG-VRP 317
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF 264
+ T+ L+S D + G+ +HG ++ + + ++L++MY++ K ++ + VF
Sbjct: 318 NAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVF 377
Query: 265 IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVR 324
G + WSA+I G +Q E AL ++ + + + + SLL A A L D+R
Sbjct: 378 SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLR 437
Query: 325 LGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF----ENMRNRNIVSYNSVI 380
IH Y+ + G S++ ++ L+ +Y KCG + +F E +++++V + ++I
Sbjct: 438 QAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCI 440
SG G+HG A ++F EM+ G+ P+E T + L AC H+GLV++G +FR M++ +
Sbjct: 498 SGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKT 557
Query: 441 PPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQ 500
R+ HY IV LLG AG L+EAYN + ++ S +WGALL+ C H N +L E+ +
Sbjct: 558 LARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAAN 617
Query: 501 QLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+LF+ EP V+L+NIYA+ GRW D+++ R + NVG RK PG S I
Sbjct: 618 KLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 235/519 (45%), Gaps = 26/519 (5%)
Query: 4 KFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDK 63
++ SLL + Q+ S+TK LH ++ +T + YAL + A LF++
Sbjct: 17 QYQSLLNHFAAT-QSISKTKALHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEE 74
Query: 64 TPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETK--PDNFTYACLIRGCHENFDLD 121
PQ S+ +N +IR + + + +A+S + +M+ K PD +TY + + E +
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 122 GLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYS 181
++H Y F V A VF + RD++ N MISGY
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 182 YCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNA 241
G+ L +F+ M D T+V ++ L +G+ +H L +
Sbjct: 195 RNGYMNDALMMFDWMVN-ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKI 253
Query: 242 YVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVA 301
V +ALVNMY + M+ A VF + + D++ W+ +I G+ + D + AL R +
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLG 361
G + + + IASL+ V G +HG+ +R + S+II+ ++LI MY KC V L
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 362 ILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHA 421
VF + ++++I+G + L + A LF+ M + ++P+ +TL+ LL A +A
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--YA 431
Query: 422 GLVKDGQEIFRRMMDEFCIPPRT------EHYIHIVKLLGMAGELEEA---YNFVLSLMQ 472
L R+ M+ C +T + +V + G LE A +N + +
Sbjct: 432 ALAD-----LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 473 PVDSGIWGALLSCCDVHGNTELA-----EIVSQQLFDNE 506
D +WGAL+S +HG+ A E+V + NE
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNE 525
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 172/456 (37%), Gaps = 41/456 (8%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ +H L+ L + ++ Y + A +FD+ +R + W MI + +
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ AL M +P+ T A L+ C + ++ + LH
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
+ Y+K V +VFSG + +A+I+G L LF MR
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR-EDV 416
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
+P+ TL L+ + L IH K+GF + + LV++YS+ + SA+
Sbjct: 417 EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 263 VFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
+F G+ + D+V W ALI+G+ D AL + + +G + I S L A +
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS 536
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNS 378
V G + ++L H ++ + N Y
Sbjct: 537 HSGLVEEGLTLFRFMLEH----------------------------YKTLARSN--HYTC 566
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEF 438
++ LG G +A+ L + +P + LL AC V+ G+ ++ +
Sbjct: 567 IVDLLGRAGRLDEAYNLITTI---PFEPTSTVWGALLAACVTHENVQLGEMAANKLFE-- 621
Query: 439 CIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPV 474
P T +Y+ + + G ++ V S+M+ V
Sbjct: 622 LEPENTGNYVLLANIYAALGRWKDMEK-VRSMMENV 656
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 239/402 (59%), Gaps = 4/402 (0%)
Query: 155 VSEASKVFSGIFER-DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLI 213
+S A KVFS I + ++ + N +I GY+ G L+ MR G +PD T LI
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 214 SGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLV 273
+ + + +G+ IH + ++SGF YV ++L+++Y+ + SAY VF + + DLV
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 274 AWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYV 333
AW+++I GF + ++AL Y ++ G K D I SLL A A++ + LG +H Y+
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 334 LRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAF 393
++ GL N+ S+ L+D+Y +CG V +F+ M ++N VS+ S+I GL ++G +A
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 394 KLFEEMLE-KGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVK 452
+LF+ M +GL P E T G+L AC H G+VK+G E FRRM +E+ I PR EH+ +V
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 453 LLGMAGELEEAYNFVLSL-MQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGA 511
LL AG++++AY ++ S+ MQP + IW LL C VHG+++LAE Q+ EP
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQP-NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 512 YKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
V+LSN+YAS+ RW DV++ R ++ G +K+PG S + G
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVG 469
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 179/399 (44%), Gaps = 18/399 (4%)
Query: 1 MSVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALN----DDLIS 56
M K +LLQ S T+ R Q+HA +R +S K L FY ++ +
Sbjct: 14 MVEKCINLLQTYGVSSITKLR--QIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSY 71
Query: 57 AYNLFDKTPQR-SIFLWNSMIRAFAKAHKFDEALSFYAKM-LRTETKPDNFTYACLIRGC 114
A+ +F K + ++F+WN++IR +A+ A S Y +M + +PD TY LI+
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 115 HENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCN 174
D+ +H Y+ V+ A KVF + E+DLV N
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 175 AMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLK 234
++I+G++ G + L L+ M G +PDGFT+V L+S L +G+ +H +K
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 235 SGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFF 294
G N + + L+++Y+R + A +F + + V+W++LI G K+A+
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 295 YRNL-SVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLR----HGLESNIIVSSALI 349
++ + S G I +L A + V+ G E Y R + +E I ++
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCMV 367
Query: 350 DMYLKCGFVGLGILVFENMR-NRNIVSYNSVISGLGLHG 387
D+ + G V ++M N+V + +++ +HG
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 139/321 (43%), Gaps = 7/321 (2%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ +H++++RS + +L YA D+ SAY +FDK P++ + WNS+I FA+
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
K +EAL+ Y +M KPD FT L+ C + L + +H
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y++ V EA +F + +++ V ++I G + GF + ++LF M
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 320
Query: 203 QPDGFTLVGLISGLMDFSLLGIG-QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
P T VG++ ++ G + + + + +V++ +R + AY
Sbjct: 321 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 380
Query: 262 GVFIGL-YQPDLVAWSALITGFLQCEDYKKALFFYRNLSV--AGKKADPILIASLLVASA 318
+ QP++V W L+ D A F + D +L++++ +
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 440
Query: 319 QLTDVRLGTEIHGYVLRHGLE 339
+ +DV+ +I +LR G++
Sbjct: 441 RWSDVQ---KIRKQMLRDGVK 458
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 286/561 (50%), Gaps = 39/561 (6%)
Query: 3 VKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYA-TKILRFYALNDDLISAYNLF 61
V +S+ +L+ S + R+ +H +R + + ++ Y A LF
Sbjct: 397 VSITSICGDLSFSREGRA----VHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 62 DKTPQRSIFLWNSMIRAFAK---AHK----FDEALSFYAKMLRTETKPDNFTYACLIRGC 114
T R + WNSMI AF++ HK F E +S Y+ +K T ++ C
Sbjct: 453 KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSC-----SKFSLSTVLAILTSC 507
Query: 115 HENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCN 174
+ L + +H +A+ + +SE RDL N
Sbjct: 508 DSSDSLIFGKSVHCWLQKLGDLT---------SAFLRLETMSET---------RDLTSWN 549
Query: 175 AMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLK 234
++ISG + G + L+ F M GK + D TL+G IS + L+ G+ HGL +K
Sbjct: 550 SVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIK 609
Query: 235 SGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFF 294
S + + + + L+ MY R K + SA VF + P+L +W+ +I+ Q + ++
Sbjct: 610 SLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQL 669
Query: 295 YRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLK 354
+RNL + + + I LL AS QL G + H +++R G ++N VS+AL+DMY
Sbjct: 670 FRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSS 726
Query: 355 CGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG-LKPDESTLSG 413
CG + G+ VF N +I ++NSVIS G HG+ +A +LF+E+ ++P++S+
Sbjct: 727 CGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFIS 786
Query: 414 LLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQP 473
LL AC H+G + +G +++M ++F + P TEH + IV +LG AG+L EAY F+ + +P
Sbjct: 787 LLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEP 846
Query: 474 VDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTR 533
+G+WGALLS C+ HG+T+L + V++ LF+ EP +Y + L+N Y G W++ R R
Sbjct: 847 QKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLR 906
Query: 534 DNIVNVGARKMPGLSWIGGGC 554
+ + +K+PG S I C
Sbjct: 907 KMVEDNALKKLPGYSVIDVRC 927
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 204/420 (48%), Gaps = 10/420 (2%)
Query: 8 LLQELTKSHQTRSRT---KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
L+++ +S R+ T + +H L+ L + ++K+L FY +L+S+ LFD+
Sbjct: 89 FLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDEL 148
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
++ + +WNSMI A + ++ A+ + +M+ + D+ T
Sbjct: 149 KEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCS 208
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
+LH Y+K ++S A VF+ + RD+V N +++ G
Sbjct: 209 MLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANG 268
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY-- 242
K LQ F M G Q+ D T +IS L +G+ +HGL +KSG+ A+
Sbjct: 269 HPRKSLQYFKSMTGSG-QEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVS 327
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNL-SVA 301
VG+++++MYS+ +A VF L D+++ +A++ GF +++A + SV
Sbjct: 328 VGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVD 387
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII-VSSALIDMYLKCGFVGL 360
+ D + S+ L+ R G +HGY +R ++S + V +++IDMY KCG
Sbjct: 388 KIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQ 447
Query: 361 GILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK--GLKPDESTLSGLLCAC 418
L+F+ +R++VS+NS+IS +G +A LF+E++ + K ST+ +L +C
Sbjct: 448 AELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 186/383 (48%), Gaps = 46/383 (12%)
Query: 58 YNLFDKTPQR-------SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACL 110
+NLFD+ P+R S ++R+F M+RTET+ + C
Sbjct: 69 HNLFDELPERENRTMESSFMFLRDVLRSF---------------MMRTETETPRSVH-CF 112
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL 170
C DL T Y + + +S +F + E+D+
Sbjct: 113 ALKCGLLQDL-------------------ATSSKLLTFYGRTGELVSSSCLFDELKEKDV 153
Query: 171 VLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHG 230
++ N+MI+ + G + + LF M G + D TL+ S L L +H
Sbjct: 154 IVWNSMITALNQNGRYIAAVGLFIEMIHKG-NEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 231 LCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKK 290
L +++G ++ + +AL+N+Y++ + ++SA VF + D+V+W+ ++T L +K
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 291 ALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL--ESNIIVSSAL 348
+L ++++++ +G++AD + + ++ A + + ++ LG +HG V++ G E+++ V +++
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 349 IDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLE-KGLKPD 407
I MY KCG VFE + R+++S N++++G +G+ +AF + +M ++PD
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 408 ESTLSGLLCACCHAGLVKDGQEI 430
+T+ + C ++G+ +
Sbjct: 393 IATVVSITSICGDLSFSREGRAV 415
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 281/551 (50%), Gaps = 2/551 (0%)
Query: 1 MSVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNL 60
+S F+ L ++S + +Q+H +++ L ++ + T +L Y+ + A +
Sbjct: 271 VSTSFTGALGACSQSENS-GFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV 329
Query: 61 FDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDL 120
F + + +WN+M+ A+A+ AL + M + PD+FT + +I C
Sbjct: 330 FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLY 389
Query: 121 DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGY 180
+ + +H T YSK +A VF + E+D+V ++ISG
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 181 SYCGFWGKGLQLFNGMREIGKQ-QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDC 239
G + + L++F M++ +PD + + + L G +HG +K+G
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL 509
Query: 240 NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
N +VGS+L+++YS+ A VF + ++VAW+++I+ + + + ++ + +
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
G D + I S+LVA + + G +HGY LR G+ S+ + +ALIDMY+KCGF
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
+F+ M++++++++N +I G G HG A LF+EM + G PD+ T L+ AC
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 420 HAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIW 479
H+G V++G+ IF M ++ I P EHY ++V LLG AG LEEAY+F+ ++ DS IW
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Query: 480 GALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNV 539
LLS H N EL + +++L EP +G+ V L N+Y G ++ + +
Sbjct: 750 LCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
Query: 540 GARKMPGLSWI 550
G K PG SWI
Sbjct: 810 GLHKQPGCSWI 820
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 227/495 (45%), Gaps = 10/495 (2%)
Query: 19 RSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRS-IFLWNSMIR 77
R KQ+H +LR+ L +SF T ++ Y I A+ +F + +S + LWN MI
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 78 AFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
F + + +L Y K + ++ + C ++ + R +H
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
+ YSK V EA VFS + ++ L + NAM++ Y+ + L LF MR
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
+ PD FTL +IS L G+ +H K + + SAL+ +YS+ C
Sbjct: 366 Q-KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCD 424
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK--KADPILIASLLV 315
AY VF + + D+VAW +LI+G + +K+AL + ++ K D ++ S+
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 316 ASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS 375
A A L +R G ++HG +++ GL N+ V S+LID+Y KCG + + VF +M N+V+
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 376 YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM 435
+NS+IS + L + LF ML +G+ PD +++ +L A + G+ + +
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 436 DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
IP T ++ + G + A N + MQ W ++ HG+
Sbjct: 605 -RLGIPSDTHLKNALIDMYVKCGFSKYAEN-IFKKMQHKSLITWNLMIYGYGSHGDC--- 659
Query: 496 EIVSQQLFDNEPRKG 510
I + LFD + G
Sbjct: 660 -ITALSLFDEMKKAG 673
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 200/448 (44%), Gaps = 24/448 (5%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
F SLL+ + + S K +H ++ ++ F AT ++ Y L A +FD
Sbjct: 63 FPSLLKACS-ALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 65 PQ-------RSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR-GCHE 116
Q R + +WNSMI + K +F E + + +ML +PD F+ + ++ C E
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 117 -NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER-DLVLCN 174
NF + + +H Y KF +A +VF I ++ ++VL N
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 175 AMISGYSYCGFWGKGLQLF-----NGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIH 229
MI G+ G L L+ N ++ + + G + G G+ IH
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVST------SFTGALGACSQSENSGFGRQIH 295
Query: 230 GLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYK 289
+K G + YV ++L++MYS+ + A VF + L W+A++ + + +
Sbjct: 296 CDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGY 355
Query: 290 KALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALI 349
AL + + D +++++ + L G +H + + ++S + SAL+
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL 415
Query: 350 DMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML--EKGLKPD 407
+Y KCG LVF++M +++V++ S+ISGL +G +A K+F +M + LKPD
Sbjct: 416 TLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPD 475
Query: 408 ESTLSGLLCACCHAGLVKDGQEIFRRMM 435
++ + AC ++ G ++ M+
Sbjct: 476 SDIMTSVTNACAGLEALRFGLQVHGSMI 503
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 137/290 (47%), Gaps = 16/290 (5%)
Query: 207 FTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIG 266
FT L+ + L G+ IHG + G+ + ++ ++LVNMY + ++ A VF G
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 267 LYQP-------DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
Q D+ W+++I G+ + +K+ + +R + V G + D ++ ++ +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 320 LTDVRL--GTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR-NIVSY 376
+ R G +IHG++LR+ L+++ + +ALIDMY K G VF + ++ N+V +
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM-- 434
N +I G G G+ + L+ +K ++ +G L AC + G++I +
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 435 MDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLS 484
M P + + GM GE E ++ V+ IW A+++
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLE----IWNAMVA 346
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 279 ITGFLQCEDYKKALFFYRNLSVAGKKADPIL-IASLLVASAQLTDVRLGTEIHGYVLRHG 337
I +Q +Y +AL Y + + SLL A + LT++ G IHG V+ G
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLG 90
Query: 338 LESNIIVSSALIDMYLKCGFVGLGILVFE-------NMRNRNIVSYNSVISGLGLHGLAA 390
+ ++++L++MY+KCGF+ + VF+ + R++ +NS+I G
Sbjct: 91 WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFK 150
Query: 391 QAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVK--DGQEIFRRMM 435
+ F ML G++PD +LS ++ C G + +G++I M+
Sbjct: 151 EGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFML 197
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 283/537 (52%), Gaps = 15/537 (2%)
Query: 23 KQLHALILRSHLSHESFYA-TKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
+Q+H ++R +S A T ++ YA + A +F + +R +F +N++I F
Sbjct: 80 QQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVV 138
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
+A+ Y +M PD +T+ L++G + +L ++ +H
Sbjct: 139 NGSPLDAMETYREMRANGILPDKYTFPSLLKGS-DAMELSDVKKVHGLAFKLGFDSDCYV 197
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERD-LVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
T+YSKF V +A KVF + +RD VL NA+++GYS + L +F+ MRE G
Sbjct: 198 GSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG 257
Query: 201 KQQPDGFTLVGLISGLMDFSLLGI---GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
G + + S L F++ G G+ IHGL +K+G + V +AL++MY + K +
Sbjct: 258 V----GVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWL 313
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVAS 317
A +F + + DL W++++ C D+ L + + +G + D + + ++L
Sbjct: 314 EEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTC 373
Query: 318 AQLTDVRLGTEIHGYVLRHGL----ESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNI 373
+L +R G EIHGY++ GL SN + ++L+DMY+KCG + +VF++MR ++
Sbjct: 374 GRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDS 433
Query: 374 VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRR 433
S+N +I+G G+ A +F M G+KPDE T GLL AC H+G + +G+ +
Sbjct: 434 ASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQ 493
Query: 434 MMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTE 493
M + I P ++HY ++ +LG A +LEEAY +S + +W ++LS C +HGN +
Sbjct: 494 METVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKD 553
Query: 494 LAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
LA + ++L + EP V++SN+Y G++++V RD + +K PG SWI
Sbjct: 554 LALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWI 610
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 6/305 (1%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQR-SIFLWNSMIRA 78
S K++H L + + + + ++ Y+ + A +FD+ P R LWN+++
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Query: 79 FAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXX 138
+++ +F++AL ++KM T ++ + D+D R +H
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 296
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE 198
Y K + EA+ +F + ERDL N+++ + YCG L LF M
Sbjct: 297 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 356
Query: 199 IGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGF----DCNAYVGSALVNMYSRF 254
G +PD TL ++ + L G+ IHG + SG N ++ ++L++MY +
Sbjct: 357 SGI-RPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKC 415
Query: 255 KCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLL 314
+ A VF + D +W+ +I G+ + AL + + AG K D I LL
Sbjct: 416 GDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
Query: 315 VASAQ 319
A +
Sbjct: 476 QACSH 480
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 24/320 (7%)
Query: 225 GQGIHGLCLKSGF-DCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
GQ IHG ++ GF D + G++LVNMY++ M A VF G + D+ ++ALI+GF+
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVF-GGSERDVFGYNALISGFV 137
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVAS--AQLTDVRLGTEIHGYVLRHGLESN 341
A+ YR + G D SLL S +L+DV+ ++HG + G +S+
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK---KVHGLAFKLGFDSD 194
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMRNR-NIVSYNSVISGLGLHGLAAQAFKLFEEML 400
V S L+ Y K V VF+ + +R + V +N++++G A +F +M
Sbjct: 195 CYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMR 254
Query: 401 EKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIV---KLLGMA 457
E+G+ T++ +L A +G + +G+ I + +T IV L+ M
Sbjct: 255 EEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG-------LAVKTGSGSDIVVSNALIDMY 307
Query: 458 GE---LEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKV 514
G+ LEEA N + M D W ++L D G+ + + +++ + R V
Sbjct: 308 GKSKWLEEA-NSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI--V 364
Query: 515 MLSNIYASDGRWDDVKRTRD 534
L+ + + GR +++ R+
Sbjct: 365 TLTTVLPTCGRLASLRQGRE 384
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 268 bits (684), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 170/534 (31%), Positives = 273/534 (51%), Gaps = 12/534 (2%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAF 79
S+ + +H + +S L +S ++ FY+ +L SA LF + +S WN+MI A+
Sbjct: 58 SQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAY 117
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG--CHENFDLDGLRILHXXXXXXXXXX 137
+++ +EA++ + M + T L+ HE LH
Sbjct: 118 SQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP--------LHCLVVKCGMVN 169
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
AYS+ + A ++++ + +V +++S Y+ G + F+ R
Sbjct: 170 DISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTR 229
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
++ + D LVG++ G S + IG +HG +KSG V + L+ MYS+F +
Sbjct: 230 QLC-MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDV 288
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL-FFYRNLSVAGKKADPILIASLLVA 316
+ +F L + L++W+++I+G +Q A F++ + G D I IASLL
Sbjct: 289 ETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG 348
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
+QL + LG E+HGY LR+ E+ V +ALIDMY KCG VF++++ ++
Sbjct: 349 CSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATW 408
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
NS+ISG L GL +A + EM EKGLKPDE T G+L AC H G V +G+ FR M+
Sbjct: 409 NSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 468
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
EF I P +HY +V LLG A EA + + DS +WGALLS C +H E+ E
Sbjct: 469 EFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGE 528
Query: 497 IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V++++F + + G V++SN+YA++ WDDV R R+ + + G G+S I
Sbjct: 529 YVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 582
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 169/367 (46%), Gaps = 8/367 (2%)
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
P+R +WN++I +++ +A + ML+ P T L+ C + + R
Sbjct: 2 PERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGR 61
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
+H + YSK + + A +F + ++ V N MI YS G
Sbjct: 62 SVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 121
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
+ + +F M E + T++ L+S + + +H L +K G + V
Sbjct: 122 LQEEAITVFKNMFE-KNVEISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVV 174
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
++LV YSR C+ SA ++ Q +V +++++ + + D A+ ++ K
Sbjct: 175 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 234
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILV 364
D + + +L + + + +G +HGY ++ GL + +V + LI MY K V + +
Sbjct: 235 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 294
Query: 365 FENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEE-MLEKGLKPDESTLSGLLCACCHAGL 423
FE ++ ++S+NSVISG G A+ AF++F + ML GL PD T++ LL C
Sbjct: 295 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 354
Query: 424 VKDGQEI 430
+ G+E+
Sbjct: 355 LNLGKEL 361
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 268 bits (684), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 154/528 (29%), Positives = 264/528 (50%), Gaps = 34/528 (6%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ +H+ I+ L S K++R YA D+ SA +FD+ P+R++ + N MIR++
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ E + + M +PD++T+ C+++ C + + R +H
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
+ Y K +SEA V + RD+V N+++ GY+ + L++ M + K
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV-KI 237
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
D T+ L+ + + + + MY +
Sbjct: 238 SHDAGTMASLLPAVSNTTTENV-------------------------MYVK--------D 264
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
+F + + LV+W+ +I +++ +A+ Y + G + D + I S+L A +
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISG 382
+ LG +IHGY+ R L N+++ +ALIDMY KCG + VFENM++R++VS+ ++IS
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
G G A LF ++ + GL PD L AC HAGL+++G+ F+ M D + I P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 443 RTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQL 502
R EH +V LLG AG+++EAY F+ + + +WGALL C VH +T++ + + +L
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 503 FDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
F P + Y V+LSNIYA GRW++V R+ + + G +K PG S +
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/528 (29%), Positives = 264/528 (50%), Gaps = 34/528 (6%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ +H+ I+ L S K++R YA D+ SA +FD+ P+R++ + N MIR++
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ E + + M +PD++T+ C+++ C + + R +H
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
+ Y K +SEA V + RD+V N+++ GY+ + L++ M + K
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV-KI 237
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
D T+ L+ + + + + MY +
Sbjct: 238 SHDAGTMASLLPAVSNTTTENV-------------------------MYVK--------D 264
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
+F + + LV+W+ +I +++ +A+ Y + G + D + I S+L A +
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISG 382
+ LG +IHGY+ R L N+++ +ALIDMY KCG + VFENM++R++VS+ ++IS
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
G G A LF ++ + GL PD L AC HAGL+++G+ F+ M D + I P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 443 RTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQL 502
R EH +V LLG AG+++EAY F+ + + +WGALL C VH +T++ + + +L
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 503 FDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
F P + Y V+LSNIYA GRW++V R+ + + G +K PG S +
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 267/534 (50%), Gaps = 10/534 (1%)
Query: 23 KQLHALILRSHLSHES-FYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
+ +HA I+++ S F A ++ Y+ D SA + TP R++ W S+I A+
Sbjct: 26 RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQ 85
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE-NFDLDGLRILHXXXXXXXXXXXXX 140
F AL + +M R P++FT+ C + + G +I H
Sbjct: 86 NGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI-HALAVKCGRILDVF 144
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y K +A K+F I ER+L NA IS G + ++ F R I
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI- 203
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
P+ T ++ D+ L +G +HGL L+SGFD + V + L++ Y + K + S+
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 261 YGVFIGLYQPDLVAWSALITGFLQC-EDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
+F + + V+W +L+ ++Q ED K ++ + R+ + +D +I+S+L A A
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD-FMISSVLSACAG 322
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
+ + LG IH + ++ +E I V SAL+DMY KCG + F+ M +N+V+ NS+
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDES--TLSGLLCACCHAGLVKDGQEIFRRMMDE 437
I G G A LFEEM +G P + T LL AC AG V++G +IF M
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST 442
Query: 438 FCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL-MQPVDSGIWGALLSCCDVHGNTELAE 496
+ I P EHY IV +LG AG +E AY F+ + +QP S +WGAL + C +HG +L
Sbjct: 443 YGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS-VWGALQNACRMHGKPQLGL 501
Query: 497 IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ ++ LF +P+ V+LSN +A+ GRW + R+ + VG +K G SWI
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 555
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 268/530 (50%), Gaps = 32/530 (6%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFA 80
R + LHA ++ S ++ + A K++ FY ++ A +FD+ P+R I MI A A
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 81 KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
+ + E+L F+ +M + K D F L++ D + +++H
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
YSKF V A KVFS + E+DLV+ NAMISGY+ + L L M+ +G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
+PD T LISG FS + + + + C++
Sbjct: 214 -IKPDVITWNALISG---FSHMRNEEKVSEIL--------------------ELMCLDG- 248
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
Y+PD+V+W+++I+G + +KA ++ + G + I +LL A L
Sbjct: 249 -------YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL 301
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
++ G EIHGY + GLE + V SAL+DMY KCGF+ +++F + V++NS+I
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMI 361
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCI 440
HGLA +A +LF++M G K D T + +L AC HAGL GQ +F M +++ I
Sbjct: 362 FCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRI 421
Query: 441 PPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQ 500
PR EHY +V LLG AG+L EAY + ++ D +WGALL+ C HGN ELA I ++
Sbjct: 422 VPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAK 481
Query: 501 QLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
L + EP ++L+++YA+ G W+ V R + I R+ G SW+
Sbjct: 482 HLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWV 531
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 268/549 (48%), Gaps = 6/549 (1%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
F+SLL SH + Q H++I++ L+ F ++ YA L A +F++
Sbjct: 431 FTSLLSTCAASHDLEMGS-QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
R WN++I ++ + EA + +M D A ++ C L +
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
+H YSK + +A KVFS + E +V NA+I+GYS
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNA-YV 243
+ + LF M G P T ++ L +G HG K GF Y+
Sbjct: 610 L-EEAVVLFQEMLTRG-VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQP-DLVAWSALITGFLQCEDYKKALFFYRNLSVAG 302
G +L+ MY + M A +F L P +V W+ +++G Q Y++AL FY+ + G
Sbjct: 668 GISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG 727
Query: 303 KKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGI 362
D ++L + L+ +R G IH + + + + S+ LIDMY KCG +
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 363 LVFENMRNR-NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHA 421
VF+ MR R N+VS+NS+I+G +G A A K+F+ M + + PDE T G+L AC HA
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847
Query: 422 GLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGA 481
G V DG++IF M+ ++ I R +H +V LLG G L+EA +F+ + D+ +W +
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907
Query: 482 LLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGA 541
LL C +HG+ EI +++L + EP+ + V+LSNIYAS G W+ R + + G
Sbjct: 908 LLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGV 967
Query: 542 RKMPGLSWI 550
+K+PG SWI
Sbjct: 968 KKVPGYSWI 976
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 179/367 (48%), Gaps = 6/367 (1%)
Query: 54 LISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR- 112
L A LF + + WN MI K A+ ++ M ++ K T ++
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 113 -GCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLV 171
G N DL GL ++H + YSK + A+KVF + E++ V
Sbjct: 337 IGIVANLDL-GL-VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV 394
Query: 172 LCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGL 231
NAMI GY++ G K ++LF M+ G D FT L+S L +G H +
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDMKSSG-YNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 232 CLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKA 291
+K N +VG+ALV+MY++ + A +F + D V W+ +I ++Q E+ +A
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 292 LFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDM 351
++ +++ G +D +AS L A + + G ++H ++ GL+ ++ S+LIDM
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 352 YLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTL 411
Y KCG + VF ++ ++VS N++I+G + L +A LF+EML +G+ P E T
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITF 632
Query: 412 SGLLCAC 418
+ ++ AC
Sbjct: 633 ATIVEAC 639
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 185/408 (45%), Gaps = 36/408 (8%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+Q+H +++ L S+ ++ YA D + A +F+ + W + + KA
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+EA+ + +M +PD+ + +I
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVI------------------------------- 268
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y + + +A +F + D+V N MISG+ G ++ F MR+ +
Sbjct: 269 ----NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
TL ++S + + L +G +H +K G N YVGS+LV+MYS+ + M +A
Sbjct: 325 STRS-TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAK 383
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
VF L + + V W+A+I G+ + K + + ++ +G D SLL A D
Sbjct: 384 VFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHD 443
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISG 382
+ +G++ H +++ L N+ V +AL+DMY KCG + +FE M +R+ V++N++I
Sbjct: 444 LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
++AF LF+ M G+ D + L+ L AC H + G+++
Sbjct: 504 YVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 188/408 (46%), Gaps = 4/408 (0%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
+HA ++ L+ + + ++ Y+ + + +A +F+ +++ WN+MIR +A +
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
+ + + M + D+FT+ L+ C + DL+ H
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 145 XXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
Y+K + +A ++F + +RD V N +I Y + LF M G
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS- 527
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF 264
DG L + L G+ +H L +K G D + + GS+L++MYS+ + A VF
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 587
Query: 265 IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVR 324
L + +V+ +ALI G+ Q + ++A+ ++ + G I A+++ A + +
Sbjct: 588 SSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLT 646
Query: 325 LGTEIHGYVLRHGLESN-IIVSSALIDMYLKCGFVGLGILVFENMRN-RNIVSYNSVISG 382
LGT+ HG + + G S + +L+ MY+ + +F + + ++IV + ++SG
Sbjct: 647 LGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+G +A K ++EM G+ PD++T +L C +++G+ I
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 167/398 (41%), Gaps = 41/398 (10%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K +H+ L + E I+ YA + A FD ++ + WNSM+ ++
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSI 138
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
K + L + + + P+ FT++ ++ C +++ R +H
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y+K +S+A +VF I + + V + SGY G + + +F MR+ G
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG-H 257
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
+PD V +I N Y R + A
Sbjct: 258 RPDHLAFVTVI-----------------------------------NTYIRLGKLKDARL 282
Query: 263 VFIGLYQPDLVAWSALITGFLQ--CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
+F + PD+VAW+ +I+G + CE FF N+ + K+ + S+L A +
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFF--NMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
++ LG +H ++ GL SNI V S+L+ MY KC + VFE + +N V +N++I
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
G +G + + +LF +M G D+ T + LL C
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG-VFIGLYQPDLVAWSALIT 280
L IG+ +H L G D +G+A+V++Y+ KC +Y + D+ AW+++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYA--KCAQVSYAEKQFDFLEKDVTAWNSMLS 133
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLES 340
+ K L + +L + + +L A+ T+V G +IH +++ GLE
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 341 NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML 400
N AL+DMY KC + VFE + + N V + + SG GL +A +FE M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 401 EKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
++G +PD ++ G +KD + +F M
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 269/532 (50%), Gaps = 6/532 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K +H ++ L E ++ Y+ + +A +F +++ WN+M+ F+
Sbjct: 312 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 371
Query: 83 HKFDEALSFYAKMLR--TETKPDNFTYACLIRGC-HENFDLDGLRILHXXXXXXXXXXXX 139
+ML + K D T + C HE+F L L+ LH
Sbjct: 372 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF-LPSLKELHCYSLKQEFVYNE 430
Query: 140 XXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREI 199
+Y+K +S A +VF GI + + NA+I G++ L M+ I
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK-I 489
Query: 200 GKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
PD FT+ L+S L +G+ +HG +++ + + +V +++++Y + +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
+F + LV+W+ +ITG+LQ +AL +R + + G + I + + A +
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 609
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
L +RLG E H Y L+H LE + ++ +LIDMY K G + VF ++ ++ S+N++
Sbjct: 610 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 669
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
I G G+HGLA +A KLFEEM G PD+ T G+L AC H+GL+ +G +M F
Sbjct: 670 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG 729
Query: 440 IPPRTEHYIHIVKLLGMAGELEEAYNFVLSLM-QPVDSGIWGALLSCCDVHGNTELAEIV 498
+ P +HY ++ +LG AG+L++A V M + D GIW +LLS C +H N E+ E V
Sbjct: 730 LKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKV 789
Query: 499 SQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ +LF+ EP K V+LSN+YA G+W+DV++ R + + RK G SWI
Sbjct: 790 AAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 197/415 (47%), Gaps = 7/415 (1%)
Query: 23 KQLHALILRS-HLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
+++H L+ S L ++ T+I+ YA+ + +FD +++F WN++I ++++
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 163
Query: 82 AHKFDEALSFYAKMLR-TETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
+DE L + +M+ T+ PD+FTY C+I+ C D+ +H
Sbjct: 164 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 223
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE-- 198
+ Y V++A ++F + ER+LV N+MI +S GF + L M E
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 199 -IGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
G PD TLV ++ +G+G+G+HG +K D + +AL++MYS+ C+
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK--KADPILIASLLV 315
+A +F ++V+W+ ++ GF D R + G+ KAD + I + +
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 316 ASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS 375
+ + E+H Y L+ N +V++A + Y KCG + VF +R++ + S
Sbjct: 404 VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS 463
Query: 376 YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+N++I G + +M GL PD T+ LL AC ++ G+E+
Sbjct: 464 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 195/410 (47%), Gaps = 5/410 (1%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
+H L++++ L + F ++ FY + + A LFD P+R++ WNSMIR F+
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 85 FDEALSFYAKMLRTETK----PDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
+E+ +M+ PD T ++ C ++ + +H
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
YSK ++ A +F +++V N M+ G+S G + M G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 201 KQ-QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
+ + D T++ + S L + +H LK F N V +A V Y++ ++
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
A VF G+ + +W+ALI G Q D + +L + + ++G D + SLL A ++
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
L +RLG E+HG+++R+ LE ++ V +++ +Y+ CG + +F+ M ++++VS+N+V
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQE 429
I+G +G +A +F +M+ G++ ++ + AC ++ G+E
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 264 bits (675), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 175/574 (30%), Positives = 271/574 (47%), Gaps = 47/574 (8%)
Query: 26 HALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKF 85
HAL L + F ++ Y+ L A +FD+ + WNS+I ++AK K
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 86 DEALSFYAKMLRT-ETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
AL +++M +PDN T ++ C + LH
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 145 XXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE------ 198
Y+K + EA+ VFS + +D+V NAM++GYS G + ++LF M+E
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 199 ----------------------IGKQ------QPDGFTLVGLISGLMDFSLLGIGQGIHG 230
+ +Q +P+ TL+ ++SG L G+ IH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 231 LCLKSGFDCNA-------YVGSALVNMYSRFKCMNSAYGVFIGL--YQPDLVAWSALITG 281
+K D V + L++MY++ K +++A +F L + D+V W+ +I G
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 282 FLQCEDYKKALFFYRNLSVAGKKADP--ILIASLLVASAQLTDVRLGTEIHGYVLRHGLE 339
+ Q D KAL + + P I+ LVA A L +R+G +IH Y LR+
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 340 S-NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEE 398
+ + VS+ LIDMY KCG + LVF+NM +N V++ S+++G G+HG +A +F+E
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 399 MLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAG 458
M G K D TL +L AC H+G++ G E F RM F + P EHY +V LLG AG
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 459 ELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSN 518
L A + + +W A LSCC +HG EL E ++++ + +LSN
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689
Query: 519 IYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGG 552
+YA+ GRW DV R R + + G +K PG SW+ G
Sbjct: 690 LYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEG 723
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 128/553 (23%), Positives = 232/553 (41%), Gaps = 74/553 (13%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAY------ 58
FS+ E+T + +T I + L H+ + IL L LIS Y
Sbjct: 23 FSTSAPEITPPFIHKCKT------ISQVKLIHQKLLSFGILTL-NLTSHLISTYISVGCL 75
Query: 59 ----NLFDKTPQRS--IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
+L + P ++ WNS+IR++ ++ L + M PDN+T+ + +
Sbjct: 76 SHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFK 135
Query: 113 GCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVL 172
C E + H YS+ +S+A KVF + D+V
Sbjct: 136 ACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS 195
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLC 232
N++I Y+ G L++F+ M +PD TLV ++ +G+ +H
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 233 LKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL 292
+ S N +VG+ LV+MY++ M+ A VF + D+V+W+A++ G+ Q ++ A+
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 293 FFY-----------------------------------RNLSVAGKKADPILIASLLVAS 317
+ R + +G K + + + S+L
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 318 AQLTDVRLGTEIHGYVLR---------HGLESNIIVSSALIDMYLKCGFVGLGILVFENM 368
A + + G EIH Y ++ HG E+ +I + LIDMY KC V +F+++
Sbjct: 376 ASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI--NQLIDMYAKCKKVDTARAMFDSL 433
Query: 369 --RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG--LKPDESTLSGLLCACCHAGLV 424
+ R++V++ +I G HG A +A +L EM E+ +P+ T+S L AC +
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 425 KDGQEIFRRMM--DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGAL 482
+ G++I + + +P + ++ + G + +A V M + W +L
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSNC--LIDMYAKCGSISDA-RLVFDNMMAKNEVTWTSL 550
Query: 483 LSCCDVHGNTELA 495
++ +HG E A
Sbjct: 551 MTGYGMHGYGEEA 563
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/530 (29%), Positives = 251/530 (47%), Gaps = 1/530 (0%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFA 80
R +QLHA + + + +L YA D+ +A + F +T ++ LWN M+ A+
Sbjct: 407 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 81 KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
+ + +M E P+ +TY +++ C DL+ +H
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y+K + A + +D+V MI+GY+ F K L F M + G
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
+ D L +S L GQ IH SGF + +ALV +YSR + +
Sbjct: 587 IRS-DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
Y F D +AW+AL++GF Q + ++AL + ++ G + S + A+++
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
+++ G ++H + + G +S V +ALI MY KCG + F + +N VS+N++I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCI 440
+ HG ++A F++M+ ++P+ TL G+L AC H GLV G F M E+ +
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 441 PPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQ 500
P+ EHY+ +V +L AG L A F+ + D+ +W LLS C VH N E+ E +
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 885
Query: 501 QLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
L + EP A V+LSN+YA +WD TR + G +K PG SWI
Sbjct: 886 HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 205/429 (47%), Gaps = 2/429 (0%)
Query: 8 LLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQR 67
LL+ K++ + ++LH+ IL+ L + K+ FY DL A+ +FD+ P+R
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE-NFDLDGLRIL 126
+IF WN MI+ A + E + +M+ P+ T++ ++ C + D + +
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 127 HXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFW 186
H YS+ V A +VF G+ +D AMISG S
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 187 GKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSA 246
+ ++LF M +G P + ++S L IG+ +HGL LK GF + YV +A
Sbjct: 270 AEAIRLFCDMYVLGIM-PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 247 LVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKAD 306
LV++Y + SA +F + Q D V ++ LI G QC +KA+ ++ + + G + D
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 307 PILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFE 366
+ASL+VA + + G ++H Y + G SN + AL+++Y KC + + F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 367 NMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKD 426
N+V +N ++ GL +F++F +M + + P++ T +L C G ++
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 427 GQEIFRRMM 435
G++I +++
Sbjct: 509 GEQIHSQII 517
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 215/494 (43%), Gaps = 9/494 (1%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
FS +L+ +Q+HA IL L + ++ Y+ N + A +FD
Sbjct: 189 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
+ W +MI +K EA+ + M P + ++ ++ C + L+
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
LH + Y ++ A +FS + +RD V N +I+G S CG
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
+ K ++LF M G +PD TL L+ L GQ +H K GF N +
Sbjct: 369 YGEKAMELFKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
AL+N+Y++ + +A F+ ++V W+ ++ + +D + + +R + +
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILV 364
+ S+L +L D+ LG +IH +++ + N V S LIDMY K G + +
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 365 FENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV 424
+++VS+ ++I+G + +A F +ML++G++ DE L+ + AC +
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607
Query: 425 KDGQEIFRRMMDEFCIPPRTEHYIH---IVKLLGMAGELEEAYNFVLSLMQPVDSGIWGA 481
K+GQ+I + C+ + +V L G++EE+Y + D+ W A
Sbjct: 608 KEGQQIHAQA----CVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNA 662
Query: 482 LLSCCDVHGNTELA 495
L+S GN E A
Sbjct: 663 LVSGFQQSGNNEEA 676
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 3/267 (1%)
Query: 17 QTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMI 76
Q +Q+HA S S + + ++ Y+ + +Y F++T WN+++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 77 RAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXX 136
F ++ +EAL + +M R +NFT+ ++ E ++ + +H
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 724
Query: 137 XXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM 196
+ Y+K +S+A K F + ++ V NA+I+ YS GF + L F+ M
Sbjct: 725 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Query: 197 REIGKQQPDGFTLVGLISGLMDFSLLGIGQG-IHGLCLKSGFDCNAYVGSALVNMYSRFK 255
+P+ TLVG++S L+ G + + G +V+M +R
Sbjct: 785 IH-SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 843
Query: 256 CMNSAYGVFIGL-YQPDLVAWSALITG 281
++ A + +PD + W L++
Sbjct: 844 LLSRAKEFIQEMPIKPDALVWRTLLSA 870
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 261/506 (51%), Gaps = 14/506 (2%)
Query: 53 DLISAYNLF-DKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLI 111
+L + +N + DKT +F WNS+I A++ EAL ++ M + P ++ C I
Sbjct: 27 NLTTLFNRYVDKT---DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83
Query: 112 RGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLV 171
+ C FD+ + H YS + +A KVF I +R++V
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 172 LCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGF-----TLVGLISGLMDFSLLGIGQ 226
+MI GY G + LF + D LV +IS G+ +
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 227 GIHGLCLKSGFDCNAYVGSALVNMYSR--FKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
IH +K GFD VG+ L++ Y++ + A +F + D V+++++++ + Q
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 285 CEDYKKALFFYRNLSVAGKKA--DPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
+A +R L V K + I ++++L+A + +R+G IH V+R GLE ++
Sbjct: 264 SGMSNEAFEVFRRL-VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
IV +++IDMY KCG V F+ M+N+N+ S+ ++I+G G+HG AA+A +LF M++
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
G++P+ T +L AC HAGL +G F M F + P EHY +V LLG AG L++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 463 AYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYAS 522
AY+ + + DS IW +LL+ C +H N ELAEI +LF+ + Y ++LS+IYA
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD 502
Query: 523 DGRWDDVKRTRDNIVNVGARKMPGLS 548
GRW DV+R R + N G K PG S
Sbjct: 503 AGRWKDVERVRMIMKNRGLVKPPGFS 528
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 163/407 (40%), Gaps = 47/407 (11%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQ H + F ++ ++ Y+ L A +FD+ P+R+I W SMIR +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 83 HKFDEALSFYAKMLRTETKPDNFTY------ACLIRGCHENFDLDGLRILHXXXXXXXXX 136
+A+S + +L E D+ + +I C +H
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 137 XXXXXXXXXXTAYSKFSH--VSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFN 194
AY+K V+ A K+F I ++D V N+++S Y+ G + ++F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF- 274
Query: 195 GMREIGKQQPDGFTLVGLISGLMDFS---LLGIGQGIHGLCLKSGFDCNAYVGSALVNMY 251
R + K + F + L + L+ S L IG+ IH ++ G + + VG+++++MY
Sbjct: 275 --RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMY 332
Query: 252 SRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIA 311
+ + +A F + ++ +W+A+I G+ KAL + + +G + + I
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 312 SLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR 371
S+L A + G + G+ + ++ V L
Sbjct: 393 SVLAACSH-----AGLHVEGWRWFNAMKGRFGVEPGL----------------------- 424
Query: 372 NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
Y ++ LG G +A+ L + M +KPD S LL AC
Sbjct: 425 --EHYGCMVDLLGRAGFLQKAYDLIQRM---KMKPDSIIWSSLLAAC 466
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/589 (27%), Positives = 299/589 (50%), Gaps = 47/589 (7%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
+ L+Q T+ H+ QLHA I+ + ++F A+K++ FY D A ++FD+
Sbjct: 25 YGHLIQHFTR-HRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEI 83
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTE------TKPDNFTYACLIR---GCH 115
R+ F +N+++ A+ + +A S + + + +PD+ + +C+++ GC
Sbjct: 84 TVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGC- 142
Query: 116 ENFDLDGL-RILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCN 174
++F L L R +H T Y+K ++ A KVF + ERD+V N
Sbjct: 143 DDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWN 202
Query: 175 AMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLK 234
+MISGYS G + +++ M +P+G T++ + S L G +H ++
Sbjct: 203 SMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE 262
Query: 235 SGFD-----CNAYVG--------------------------SALVNMYSRFKCMNSAYGV 263
+ CNA +G A+++ Y + A +
Sbjct: 263 NHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMAL 322
Query: 264 FIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
F + L W+A+I+G +Q +++ + +R + G + + + ++SLL + +++
Sbjct: 323 FSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNL 382
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
+ G EIH + +R+G ++NI V++++ID Y K GF+ VF+N ++R+++++ ++I+
Sbjct: 383 KGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAY 442
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
+HG + A LF++M G KPD+ TL+ +L A H+G Q IF M+ ++ I P
Sbjct: 443 AVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPG 502
Query: 444 TEHYIHIVKLLGMAGELEEAYNFVLSLMQPVD--SGIWGALLSCCDVHGNTELAEIVSQQ 501
EHY +V +L AG+L +A F+ + P+D + +WGALL+ V G+ E+A +
Sbjct: 503 VEHYACMVSVLSRAGKLSDAMEFISKM--PIDPIAKVWGALLNGASVLGDLEIARFACDR 560
Query: 502 LFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
LF+ EP +++N+Y GRW++ + R+ + +G +K+PG SWI
Sbjct: 561 LFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWI 609
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 267/537 (49%), Gaps = 22/537 (4%)
Query: 31 RSHLSHESFYATK---------ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
R + +FY+T+ I++ YA + + A LFD+ PQ +N++I +A
Sbjct: 58 RLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYAD 117
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
A + A+ + +M + + D FT + LI C + DL ++ LH
Sbjct: 118 ARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDL--IKQLHCFSVSGGFDSYSSV 175
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFE-RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
T YSK + EA VF G+ E RD V N+MI Y K L L+ M G
Sbjct: 176 NNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG 235
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC---- 256
+ D FTL +++ L L G+ HG +K+GF N++VGS L++ YS KC
Sbjct: 236 -FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYS--KCGGCD 292
Query: 257 -MNSAYGVFIGLYQPDLVAWSALITGFLQCEDY-KKALFFYRNLSVAGKKADPILIASLL 314
M + VF + PDLV W+ +I+G+ E+ ++A+ +R + G + D +
Sbjct: 293 GMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352
Query: 315 VASAQLTDVRLGTEIHGYVLRHGLESN-IIVSSALIDMYLKCGFVGLGILVFENMRNRNI 373
A + L+ +IHG ++ + SN I V++ALI +Y K G + VF+ M N
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNA 412
Query: 374 VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRR 433
VS+N +I G HG +A L++ ML+ G+ P++ T +L AC H G V +GQE F
Sbjct: 413 VSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNT 472
Query: 434 MMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTE 493
M + F I P EHY ++ LLG AG+LEEA F+ ++ S W ALL C H N
Sbjct: 473 MKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMA 532
Query: 494 LAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
LAE + +L +P VML+N+YA +W+++ R ++ RK PG SWI
Sbjct: 533 LAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 34/228 (14%)
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA--------------YGVFIGL 267
L G+ +H L +KS + Y+ + VN+YS+ ++ A Y V +
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 268 Y-----------------QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILI 310
Y QPD V+++ LI+G+ + A+ ++ + G + D +
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 311 ASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN 370
+ L+ A D L ++H + + G +S V++A + Y K G + + VF M
Sbjct: 144 SGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 371 -RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCA 417
R+ VS+NS+I G H A+A L++EM+ KG K D TL+ +L A
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 20 SRTKQLHALILRSHL-SHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRA 78
S+ KQ+H L ++SH+ S+ ++ Y + +L A +FD+ P+ + +N MI+
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421
Query: 79 FAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGC 114
+A+ EAL Y +ML + P+ T+ ++ C
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSAC 457
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 293/570 (51%), Gaps = 37/570 (6%)
Query: 17 QTRSRTKQLHALILRSHLSHESFYATKILRFYALN---DDLISAYNLFDKTPQRSIFLWN 73
+T + +HA +++ L + ++ +K++ F L+ + L A ++F + ++ +WN
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 74 SMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDL-DGLRI------- 125
+M R A + AL Y M+ P+++T+ +++ C ++ +G +I
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 126 -----LHXXXXXXXXXXXXXXXXXXXTAYSKFSH------------------VSEASKVF 162
L+ + K H + A K+F
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 163 SGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLL 222
I +D+V NAMISGY+ G + + L+LF M + +PD T+V ++S +
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN-VRPDESTMVTVVSACAQSGSI 282
Query: 223 GIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGF 282
+G+ +H GF N + +AL+++YS+ + +A G+F L D+++W+ LI G+
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Query: 283 LQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRH--GLES 340
YK+AL ++ + +G+ + + + S+L A A L + +G IH Y+ + G+ +
Sbjct: 343 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402
Query: 341 NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML 400
+ ++LIDMY KCG + VF ++ ++++ S+N++I G +HG A +F LF M
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 401 EKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGEL 460
+ G++PD+ T GLL AC H+G++ G+ IFR M ++ + P+ EHY ++ LLG +G
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 522
Query: 461 EEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIY 520
+EA + + D IW +LL C +HGN EL E ++ L EP V+LSNIY
Sbjct: 523 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 582
Query: 521 ASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
AS GRW++V +TR + + G +K+PG S I
Sbjct: 583 ASAGRWNEVAKTRALLNDKGMKKVPGCSSI 612
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
Query: 8 LLQELTKSHQTRSRTKQLHALILRSHL--------------------SHESFYATKILRF 47
L QE+ +S +T + L L +HL ++ S T ++
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 48 YALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTY 107
YA D+ +A+ +F+ +S+ WN+MI FA + D + +++M + +PD+ T+
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 108 ACLIRGCHENFDLD 121
L+ C + LD
Sbjct: 474 VGLLSACSHSGMLD 487
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 254/513 (49%), Gaps = 15/513 (2%)
Query: 45 LRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTE-TKPD 103
+F+ + D A +FD+ P++ LWN+MI + K + E++ + ++ T+ D
Sbjct: 165 FKFWRVED----ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLD 220
Query: 104 NFTYACLIRGCHENFDLDGLRI---LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASK 160
T ++ E L LR+ +H + YSK + S
Sbjct: 221 TTTLLDILPAVAE---LQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 161 VFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFS 220
+F + D+V NAMI GY+ G L LF + G + TLV L+
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS-TLVSLVPVSGHLM 336
Query: 221 LLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALIT 280
L+ IHG CLKS F +A V +AL +YS+ + SA +F + L +W+A+I+
Sbjct: 337 LI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLES 340
G+ Q + A+ +R + + +P+ I +L A AQL + LG +H V ES
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 341 NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML 400
+I VS+ALI MY KCG + +F+ M +N V++N++ISG GLHG +A +F EML
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513
Query: 401 EKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGEL 460
G+ P T +L AC HAGLVK+G EIF M+ + P +HY +V +LG AG L
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 461 EEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIY 520
+ A F+ ++ S +W LL C +H +T LA VS++LF+ +P Y V+LSNI+
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633
Query: 521 ASDGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
++D + R K PG + I G
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIG 666
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 220/480 (45%), Gaps = 12/480 (2%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAF 79
S Q HA I+ ++ TK+ + + + A ++F + +FL+N ++R F
Sbjct: 34 SHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGF 93
Query: 80 AKAHKFDEALSFYAKMLR-TETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXX 138
+ +LS +A + + T+ KP++ TYA I D R++H
Sbjct: 94 SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE 198
Y KF V +A KVF + E+D +L N MISGY + + +Q+F +
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 199 IGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMN 258
+ D TL+ ++ + + L +G IH L K+G + YV + +++YS+ +
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 259 SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
+F +PD+VA++A+I G+ + + +L ++ L ++G + + SL+ S
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNS 378
L L IHGY L+ S+ VS+AL +Y K + +F+ +++ S+N+
Sbjct: 334 HLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQ---EIFRRMM 435
+ISG +GL A LF EM + P+ T++ +L AC G + G+ ++ R
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 436 DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
E I T ++ + G + EA + LM + W ++S +HG + A
Sbjct: 451 FESSIYVSTA----LIGMYAKCGSIAEARR-LFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 266/530 (50%), Gaps = 4/530 (0%)
Query: 24 QLHALILRSHLSHESFYATK--ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
Q+HA ++ F +L+ Y L A LF++ P++ +N++I + K
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
+ E++ + KM ++ +P +FT++ +++ D + LH
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
YSK V E +F + E D V N +IS YS + L F M+ +G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
+ + F ++S + S L +G+ +H L + D +VG++LV+MY++ + A
Sbjct: 348 DRRN-FPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLT 321
+F L Q V+W+ALI+G++Q + L + + + +AD A++L ASA
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 322 DVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVIS 381
+ LG ++H +++R G N+ S L+DMY KCG + + VFE M +RN VS+N++IS
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 382 GLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
+G A F +M+E GL+PD ++ G+L AC H G V+ G E F+ M + I
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT 586
Query: 442 PRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQ 501
P+ +HY ++ LLG G EA + + D +W ++L+ C +H N LAE +++
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK 646
Query: 502 LFDNEP-RKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
LF E R A V +SNIYA+ G W+ V+ + + G +K+P SW+
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWV 696
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 241/530 (45%), Gaps = 54/530 (10%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTE--TKPDNFTYACL 110
D+ SA +LFD P R++ W ++ +A+ FDEA + +M R+ T PD+ T+ L
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 111 IRGCHENFDLDGLRILHXXXXXX--XXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER 168
+ GC++ + + +H +Y + + A +F I E+
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 169 DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
D V N +I+GY G + + + LF MR+ G QP FT G++ ++ +GQ +
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSG-HQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDY 288
H L + +GF +A VG+ +++ YS+ + +F + + D V+++ +I+ + Q + Y
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
+ +L F+R + G A++L +A L+ +++G ++H L +S + V ++L
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392
Query: 349 IDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
+DMY KC L+F+++ R VS+ ++ISG GL KLF +M L+ D+
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQ 452
Query: 409 STLSGLLCACC-----------HA------------------------GLVKDGQEIFRR 433
ST + +L A HA G +KD ++F
Sbjct: 453 STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 512
Query: 434 MMDEFCIPPRTEHYIHIVKLLGMAGELEEAY----NFVLSLMQPVDSGIWGALLSCCD-- 487
M D + + ++ G+ E A + S +QP I G L +C
Sbjct: 513 MPDRNAVS-----WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 488 -VHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNI 536
V TE + +S ++ P+K Y ML ++ +GR+ + ++ D +
Sbjct: 568 FVEQGTEYFQAMS-PIYGITPKKKHYACML-DLLGRNGRFAEAEKLMDEM 615
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 188/451 (41%), Gaps = 51/451 (11%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+QLHAL + + S ++ +IL FY+ +D ++ LFD+ P+ +N +I ++++A
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+++ +L F+ +M NF +A ++ L R LH
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y+K EA +F + +R V A+ISGY G G GL+LF MR
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG-SNL 448
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
+ D T ++ F+ L +G+ +H ++SG N + GS LV+MY++ + A
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
VF + + V+W+ALI+ D + A+ + + +G + D + I +L A +
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH--- 565
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-----NRNIVSYN 377
CGFV G F+ M Y
Sbjct: 566 --------------------------------CGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
++ LG +G A+A KL +EM +PDE S +L AC + Q + R ++
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNAC----RIHKNQSLAERAAEK 646
Query: 438 FCIPPRTEH---YIHIVKLLGMAGELEEAYN 465
+ Y+ + + AGE E+ +
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRD 677
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/600 (27%), Positives = 281/600 (46%), Gaps = 62/600 (10%)
Query: 12 LTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFL 71
L +Q+R K +H I+R+ E+F I+ YAL A +FD+ PQ ++F
Sbjct: 16 LGARNQSR-YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFS 74
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNF----------------TYACLIRGCH 115
WN+++ A++KA E S + K+ + N Y ++R
Sbjct: 75 WNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS 134
Query: 116 ENFDLDGL----------------RILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEAS 159
N L + +H Y+ +S+A
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 160 KVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM----------------------- 196
KVF G+ +R+ V+ N+++ G CG LQLF GM
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 197 ----REIGKQ--QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNM 250
RE+ Q + D + ++ + G+ IH +++ F + YVGSAL++M
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 251 YSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILI 310
Y + KC++ A VF + Q ++V+W+A++ G+ Q ++A+ + ++ +G D +
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 311 ASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN 370
+ A A ++ + G++ HG + GL + VS++L+ +Y KCG + +F M
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 371 RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
R+ VS+ +++S G A + +LF++M++ GLKPD TL+G++ AC AGLV+ GQ
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 431 FRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
F+ M E+ I P HY ++ L +G LEEA F+ + P D+ W LLS C G
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Query: 491 NTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
N E+ + ++ L + +P A +LS+IYAS G+WD V + R + +K PG SWI
Sbjct: 555 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/534 (29%), Positives = 271/534 (50%), Gaps = 13/534 (2%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+Q+H + L+ L + ++ Y A +FD +R + WNS+I A+
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCH---ENFDLDGLRILHXXXXXXXXXXXX 139
EA+ + ++LR KPD +T +++ E L + +H
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS--KQVHVHAIKINNVSDS 452
Query: 140 XXXXXXXTAYSKFSHVSEASKVFSGIFER---DLVLCNAMISGYSYCGFWGKGLQLFNGM 196
AYS+ + EA +FER DLV NAM++GY+ K L+LF M
Sbjct: 453 FVSTALIDAYSRNRCMKEAEI----LFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 197 REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC 256
+ G ++ D FTL + + G+ +H +KSG+D + +V S +++MY +
Sbjct: 509 HKQG-ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 257 MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
M++A F + PD VAW+ +I+G ++ + ++A + + + G D IA+L A
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
S+ LT + G +IH L+ ++ V ++L+DMY KCG + +F+ + NI ++
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
N+++ GL HG + +LF++M G+KPD+ T G+L AC H+GLV + + R M
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
++ I P EHY + LG AG +++A N + S+ + ++ LL+ C V G+TE +
Sbjct: 748 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGK 807
Query: 497 IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V+ +L + EP + V+LSN+YA+ +WD++K R + +K PG SWI
Sbjct: 808 RVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 185/410 (45%), Gaps = 35/410 (8%)
Query: 22 TKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
++ H + L + F A ++ Y + LF++ P R + LWN M++A+ +
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
+EA+ + + P+ T L R ++ D ++
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVK----------------- 266
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
F++ ++AS V IF N +S Y + G + L+ F M E
Sbjct: 267 ---------SFANGNDASSVSEIIFR------NKGLSEYLHSGQYSALLKCFADMVE-SD 310
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
+ D T + +++ + L +GQ +H + LK G D V ++L+NMY + + A
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLT 321
VF + + DL++W+++I G Q +A+ + L G K D + S+L A++ L
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 322 D-VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
+ + L ++H + ++ S+ VS+ALID Y + + ++FE N ++V++N+++
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMM 489
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+G + KLF M ++G + D+ TL+ + C + G+++
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 169/400 (42%), Gaps = 38/400 (9%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K HA IL + E F ++ Y+ L A +FDK P R + WNS++ A+A++
Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS 118
Query: 83 HK-----FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
+ +A + + + T + +++ C + + H
Sbjct: 119 SECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDG 178
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
Y KF V E +F + RD+VL N M+ Y GF + + L +
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
G P+ TL L SG D +A F
Sbjct: 239 SSG-LNPNEITL-------------------RLLARISGDDSDA-------GQVKSFANG 271
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVAS 317
N A V +++ + ++ +L Y L + ++ + + D + +L +
Sbjct: 272 NDASSV------SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATA 325
Query: 318 AQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYN 377
++ + LG ++H L+ GL+ + VS++LI+MY K G VF+NM R+++S+N
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWN 385
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCA 417
SVI+G+ +GL +A LF ++L GLKPD+ T++ +L A
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 193/436 (44%), Gaps = 12/436 (2%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
+S+L+ + + S +KQ+H ++ + +SF +T ++ Y+ N + A LF++
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER- 477
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
+ WN+M+ + ++H + L +A M + + D+FT A + + C F ++ +
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
+H Y K +S A F I D V MISG G
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
+ +F+ MR +G PD FT+ L + L G+ IH LK + +VG
Sbjct: 598 EEERAFHVFSQMRLMG-VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
++LV+MY++ ++ AY +F + ++ AW+A++ G Q + K+ L ++ + G K
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 716
Query: 305 ADPILIASLLVASAQLTDVRLGTE----IHGYVLRHGLESNIIVSSALIDMYLKCGFVGL 360
D + +L A + V + +HG +G++ I S L D + G V
Sbjct: 717 PDKVTFIGVLSACSHSGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQ 773
Query: 361 GILVFENMRNRNIVS-YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
+ E+M S Y ++++ + G ++ ++LE L+P +S+ LL
Sbjct: 774 AENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE--LEPLDSSAYVLLSNMY 831
Query: 420 HAGLVKDGQEIFRRMM 435
A D ++ R MM
Sbjct: 832 AAASKWDEMKLARTMM 847
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 5/206 (2%)
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP 270
G + + S L +G+ H L + ++ + L++MYS+ + A VF +
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR 103
Query: 271 DLVAWSALITGFLQ-----CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRL 325
DLV+W++++ + Q E+ ++A +R L + ++ +L V
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 326 GTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGL 385
HGY + GL+ + V+ AL+++YLK G V G ++FE M R++V +N ++
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 386 HGLAAQAFKLFEEMLEKGLKPDESTL 411
G +A L GL P+E TL
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
+D+ LG H +L + + LI MY KCG + VF+ M +R++VS+NS++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 381 SGLGLHGLAA-----QAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV 424
+ QAF LF + + + TLS +L C H+G V
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 266/513 (51%), Gaps = 8/513 (1%)
Query: 44 ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPD 103
++ Y D+ A LFD+ +R + W +MI F++ +AL + +M R + K +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 104 NFTYACLIRGCHENFDL-DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVF 162
FTY +++ C + L +G++I H + Y++ + EA F
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQI-HGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 163 SGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLL 222
+ ERDLV NAMI GY+ LF M GK+ PD FT L+ + L
Sbjct: 172 DSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK-PDCFTFGSLLRASIVVKCL 230
Query: 223 GIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGF 282
I +HGL +K GF ++ + +LVN Y + + +A+ + G + DL++ +ALITGF
Sbjct: 231 EIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 290
Query: 283 LQCEDYKKALF-FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG-LES 340
Q + F ++++ K D ++++S+L + V +G +IHG+ L+ +
Sbjct: 291 SQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRF 350
Query: 341 NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML 400
++ + ++LIDMY K G + +L FE M+ +++ S+ S+I+G G HG +A L+ M
Sbjct: 351 DVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRME 410
Query: 401 EKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGEL 460
+ +KP++ T LL AC H G + G +I+ M+++ I R EH I+ +L +G L
Sbjct: 411 HERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYL 470
Query: 461 EEAYNFVLSL--MQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSN 518
EEAY + S + + S WGA L C HGN +L+++ + QL EPRK + L++
Sbjct: 471 EEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLAS 530
Query: 519 IYASDGRWDDVKRTRDNIVNVGA-RKMPGLSWI 550
+YA++G WD+ TR + G+ K PG S +
Sbjct: 531 VYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 156/342 (45%), Gaps = 12/342 (3%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
Q+H + + + + + +L YA + A FD +R + WN+MI +
Sbjct: 134 QIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANA 193
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
D + S + ML KPD FT+ L+R L+ + LH
Sbjct: 194 CADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIR 253
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY---CGFWGKGLQLFNGMREIG 200
AY K ++ A K+ G +RDL+ C A+I+G+S C +F M +
Sbjct: 254 SLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCT--SDAFDIFKDMIRM- 310
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG---FDCNAYVGSALVNMYSRFKCM 257
K + D + ++ + + IG+ IHG LKS FD +G++L++MY++ +
Sbjct: 311 KTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFD--VALGNSLIDMYAKSGEI 368
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVAS 317
A F + + D+ +W++LI G+ + +++KA+ Y + K + + SLL A
Sbjct: 369 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 428
Query: 318 AQLTDVRLGTEIHGYVL-RHGLESNIIVSSALIDMYLKCGFV 358
+ LG +I+ ++ +HG+E+ S +IDM + G++
Sbjct: 429 SHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYL 470
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 106/190 (55%)
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCED 287
IHG + +GF N + L+++Y + + A +F + + D+V+W+A+I+ F +C
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 288 YKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSA 347
+ AL ++ + KA+ S+L + L ++ G +IHG V + N+IV SA
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 348 LIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPD 407
L+ +Y +CG + L F++M+ R++VS+N++I G + A +F LF+ ML +G KPD
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 408 ESTLSGLLCA 417
T LL A
Sbjct: 214 CFTFGSLLRA 223
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 329 IHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGL 388
IHG + +G SN+ + LID+YLK G V +F+ + R++VS+ ++IS G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 389 AAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC---IPPRTE 445
A LF+EM + +K ++ T +L +C G +K+G +I + C + R+
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 446 HYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALL 483
++ L G++EEA M+ D W A++
Sbjct: 154 ----LLSLYARCGKMEEA-RLQFDSMKERDLVSWNAMI 186
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 265/547 (48%), Gaps = 66/547 (12%)
Query: 44 ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKM-------- 95
+++ Y N +L A LF+ P+R + WN+M+ +A+ D+A S + +M
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSW 191
Query: 96 ---LRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKF 152
L + AC++ EN+ L L + K
Sbjct: 192 NALLSAYVQNSKMEEACMLFKSRENWALVSWNCL-------------------LGGFVKK 232
Query: 153 SHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP--DGFTLV 210
+ EA + F + RD+V N +I+GY+ G + QLF+ + P D FT
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD-------ESPVQDVFTWT 285
Query: 211 GLISGLM-----------------------DFSLLGIGQGIHGLCLKSGFDC----NAYV 243
++SG + + L G QG K FD N
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
+ ++ Y++ ++ A +F + + D V+W+A+I G+ Q +AL + + G
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
+ + +S L A + + LG ++HG +++ G E+ V +AL+ MY KCG +
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 364 VFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGL 423
+F+ M ++IVS+N++I+G HG A + FE M +GLKPD++T+ +L AC H GL
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 424 VKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALL 483
V G++ F M ++ + P ++HY +V LLG AG LE+A+N + ++ D+ IWG LL
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 484 SCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARK 543
VHGNTELAE + ++F EP V+LSN+YAS GRW DV + R + + G +K
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 645
Query: 544 MPGLSWI 550
+PG SWI
Sbjct: 646 VPGYSWI 652
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 110/532 (20%), Positives = 207/532 (38%), Gaps = 60/532 (11%)
Query: 11 ELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTP----- 65
E+ K R +QLH L L A F++L + P
Sbjct: 2 EINKFRALSRRAQQLHYTSLNG-LKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCG 60
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI 125
I WN I ++ + + +EAL + +M R + +Y +I G N + + R
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSS----VSYNGMISGYLRNGEFELARK 116
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGF 185
L Y + ++ +A ++F + ERD+ N M+SGY+ G
Sbjct: 117 LF----DEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 186 WGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGS 245
+F+ M E + + L+S + S + + KS + +
Sbjct: 173 VDDARSVFDRMPE-----KNDVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWN 223
Query: 246 ALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCE--DYKKALF--------FY 295
L+ + + K + A F + D+V+W+ +ITG+ Q D + LF F
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT 283
Query: 296 RNLSVAGKKADPIL--IASLLVASAQLTDVRLGTEIHGYVLRHGLE-----------SNI 342
V+G + ++ L + +V + GYV +E N+
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV 343
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
+ +I Y +CG + +F+ M R+ VS+ ++I+G G + +A +LF +M +
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM----DEFCIPPRTEHYIHIVKLLGMAG 458
G + + S+ S L C ++ G+++ R++ + C ++ + G
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNA-----LLLMYCKCG 458
Query: 459 ELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKG 510
+EEA N + M D W +++ HG E+A + F++ R+G
Sbjct: 459 SIEEA-NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA----LRFFESMKREG 505
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 277/533 (51%), Gaps = 9/533 (1%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFA 80
R Q+H +++++ L + ++ Y ++ A LFDKT +S+ WNSMI +A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 81 KAHKFD-EALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXX 139
A+ D EAL + M + ++A +I+ C +L LH
Sbjct: 272 -ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 140 XXXXXXXTAYSKFSHVSEASKVFSGI-FERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE 198
AYSK + + +A ++F I ++V AMISG+ + + LF+ M+
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 199 IGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMN 258
G +P+ FT +++ L S +H +K+ ++ ++ VG+AL++ Y + +
Sbjct: 391 KG-VRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 259 SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLL-VAS 317
A VF G+ D+VAWSA++ G+ Q + + A+ + L+ G K + +S+L V +
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 318 AQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYN 377
A + G + HG+ ++ L+S++ VSSAL+ MY K G + VF+ R +++VS+N
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWN 565
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
S+ISG HG A +A +F+EM ++ +K D T G+ AC HAGLV++G++ F M+ +
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 438 FCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEI 497
I P EH +V L AG+LE+A + ++ P S IW +L+ C VH TEL +
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRL 685
Query: 498 VSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++++ +P A V+LSN+YA G W + + R + +K PG SWI
Sbjct: 686 AAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 218/478 (45%), Gaps = 23/478 (4%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+QLH ++ + T ++ Y + +FD+ +R++ W ++I +A+
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLRILHXXXXXXXXXXXXXX 141
DE L+ + +M T+P++FT+A + E GL++ H
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV-HTVVVKNGLDKTIPV 231
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
Y K +V +A +F + +V N+MISGY+ G + L +F MR +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR-LNY 290
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
+ + +I + L + +H +K GF + + +AL+ YS+ M A
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 262 GVF--IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
+F IG ++V+W+A+I+GFLQ + ++A+ + + G + + + +L A
Sbjct: 351 RLFKEIGCV-GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
++ +E+H V++ E + V +AL+D Y+K G V VF + +++IV+++++
Sbjct: 410 ISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL--CACCHAGLVKDGQ----EIFRR 433
++G G A K+F E+ + G+KP+E T S +L CA +A + + Q I R
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 434 MMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGN 491
+ C+ ++ + G +E A V + D W +++S HG
Sbjct: 526 LDSSLCVSS------ALLTMYAKKGNIESAEE-VFKRQREKDLVSWNSMISGYAQHGQ 576
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 209/458 (45%), Gaps = 38/458 (8%)
Query: 54 LISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG 113
L +A+NLFDK+P R + S++ F++ + EA + + R + D ++ +++
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 114 ----CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERD 169
C E F R LH Y K S+ + KVF + ER+
Sbjct: 103 SATLCDELFG----RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 170 LVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIH 229
+V +ISGY+ + L LF M+ G QP+ FT + L + + G G +H
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEG-TQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 230 GLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYK 289
+ +K+G D V ++L+N+Y + + A +F +V W+++I+G+
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 290 KALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALI 349
+AL + ++ + + AS++ A L ++R ++H V+++G + + +AL+
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 350 DMYLKCGFVGLGILVFENMR-NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
Y KC + + +F+ + N+VS+ ++ISG + +A LF EM KG++P+E
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 409 STLSGLLCAC-------CHAGLVKDGQE----IFRRMMDEFCIPPRTEHYIHIVKLLGMA 457
T S +L A HA +VK E + ++D + VKL
Sbjct: 398 FTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAY------------VKL---- 441
Query: 458 GELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
G++EEA V S + D W A+L+ G TE A
Sbjct: 442 GKVEEAAK-VFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 135/269 (50%), Gaps = 3/269 (1%)
Query: 153 SHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP-DGFTLVG 211
S + A +F RD +++ G+S G + +LF + +G + F+ V
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 212 LISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPD 271
+S + L G + +H C+K GF + VG++LV+ Y + VF + + +
Sbjct: 101 KVSATLCDELFG--RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 272 LVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHG 331
+V W+ LI+G+ + + L + + G + + A+ L A+ G ++H
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218
Query: 332 YVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQ 391
V+++GL+ I VS++LI++YLKCG V ++F+ +++V++NS+ISG +GL +
Sbjct: 219 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 278
Query: 392 AFKLFEEMLEKGLKPDESTLSGLLCACCH 420
A +F M ++ ES+ + ++ C +
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
FSS+L ++ + + KQ H ++S L ++ +L YA ++ SA +F +
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGC 114
++ + WNSMI +A+ + +AL + +M + + K D T+ + C
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 166/572 (29%), Positives = 292/572 (51%), Gaps = 44/572 (7%)
Query: 19 RSRTK----QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNS 74
+SR K Q+H LI++ + + F ++ FYA +L SA +FD+ +R++ W S
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 75 MIRAFAKAHKFDEALSFYAKMLR-TETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXX 133
MI +A+ +A+ + +M+R E P++ T C+I C + DL+ ++
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 134 XXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLF 193
Y K + + A ++F +L LCNAM S Y G + L +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 194 NGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSR 253
N M + G +PD +++ IS + G+ HG L++GF+ + +AL++MY
Sbjct: 326 NLMMDSG-VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY-- 382
Query: 254 FKC---------------------------------MNSAYGVFIGLYQPDLVAWSALIT 280
KC +++A+ F + + ++V+W+ +I+
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 281 GFLQCEDYKKALFFYRNL-SVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLE 339
G +Q +++A+ + ++ S G AD + + S+ A L + L I+ Y+ ++G++
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 340 SNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEM 399
++ + + L+DM+ +CG + +F ++ NR++ ++ + I + + G A +A +LF++M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 400 LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGE 459
+E+GLKPD G L AC H GLV+ G+EIF M+ + P HY +V LLG AG
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 460 LEEAYNFVLSL-MQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSN 518
LEEA + + M+P D IW +LL+ C V GN E+A ++++ P + V+LSN
Sbjct: 623 LEEAVQLIEDMPMEPNDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSN 681
Query: 519 IYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+YAS GRW+D+ + R ++ G RK PG S I
Sbjct: 682 VYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 215/455 (47%), Gaps = 10/455 (2%)
Query: 14 KSHQTRSRTKQLHALILRSHLSHESFYATKILRF---YALNDDLISAYNLFDKTPQR-SI 69
K+ +T K H + + L ++ TK++ + L A +F+ + +
Sbjct: 40 KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTC 99
Query: 70 FLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHEN-FDLDGLRILHX 128
F++NS+IR +A + +EA+ + +M+ + PD +T+ + C ++ +G++I H
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI-HG 158
Query: 129 XXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGK 188
Y++ + A KVF + ER++V +MI GY+ F
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 189 GLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALV 248
+ LF M + P+ T+V +IS L G+ ++ SG + N + SALV
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 249 NMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPI 308
+MY + ++ A +F +L +A+ + +++ ++AL + + +G + D I
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 309 LIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENM 368
+ S + + +QL ++ G HGYVLR+G ES + +ALIDMY+KC +F+ M
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 369 RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQ 428
N+ +V++NS+++G +G A++ FE M EK + + +SGL+ L ++
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV----QGSLFEEAI 454
Query: 429 EIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEA 463
E+F M + + + I G G L+ A
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 184/596 (30%), Positives = 300/596 (50%), Gaps = 61/596 (10%)
Query: 9 LQELTKSHQT---------RSRTKQLHALILRSHLSHESFYATKILRFYALN--DDLISA 57
+Q L +HQ+ R++ KQ+ A I+R +L ++F ++++ F A+ ++L A
Sbjct: 28 VQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLA 87
Query: 58 YNLF-DKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE 116
LF + TP ++F++N+MI A + + +E Y+ M+R PD T+ L++
Sbjct: 88 KLLFLNFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKA--S 143
Query: 117 NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTA-YSKFSHVSEASKVFSGIFERDLVLCNA 175
+F L ++ +H Y + + A KVF+ + D+ N
Sbjct: 144 SF-LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNV 202
Query: 176 MISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKS 235
MI GY+ GF + L+L+ M G + PD +T++ L+ S + +G+G+HG +
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGIE-PDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR 261
Query: 236 G--FDCNAYVGSALVNMYSRFKC---------------------------------MNSA 260
G + N + +AL++MY FKC M +A
Sbjct: 262 GPVYSSNLILSNALLDMY--FKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAA 319
Query: 261 YGVFIGLYQPDLVAWSALITGFLQ--CEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
VF + + DLV+W++L+ G+ + C+ FY V K D + + SL+ +A
Sbjct: 320 QAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAA 379
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNS 378
++ G +HG V+R L+ + +SSALIDMY KCG + +VF+ +++ + S
Sbjct: 380 NNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTS 439
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEF 438
+I+GL HG QA +LF M E+G+ P+ TL +L AC H+GLV++G +F M D+F
Sbjct: 440 MITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKF 499
Query: 439 CIPPRTEHYIHIVKLLGMAGELEEAYNFVLS--LMQPVDSGIWGALLSCCDVHGNTELAE 496
P TEHY +V LL AG +EEA + V M+P S +WG++LS C + E AE
Sbjct: 500 GFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQS-MWGSILSACRGGEDIETAE 558
Query: 497 IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGG 552
+ +L EP K V+LSNIYA+ GRW +TR+ + N G +K G S + G
Sbjct: 559 LALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVG 614
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/526 (28%), Positives = 267/526 (50%), Gaps = 1/526 (0%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
LH+ I++ +F ++ Y++ + SA +F+ + I +W ++ + +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
F+++L + M P+N+T+ ++ D + +H
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 145 XXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
Y++ +S+A KVF+ + + D+V + MI+ + GF + + LF MRE P
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE-AFVVP 346
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF 264
+ FTL +++G G+G+ +HGL +K GFD + YV +AL+++Y++ + M++A +F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 265 IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVR 324
L + V+W+ +I G+ + KA +R + +S L A A L +
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 325 LGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLG 384
LG ++HG ++ + VS++LIDMY KCG + VF M ++ S+N++ISG
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYS 526
Query: 385 LHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRT 444
HGL QA ++ + M ++ KP+ T G+L C +AGL+ GQE F M+ + I P
Sbjct: 527 THGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCL 586
Query: 445 EHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFD 504
EHY +V+LLG +G+L++A + + IW A+LS N E A ++++
Sbjct: 587 EHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILK 646
Query: 505 NEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
P+ A V++SN+YA +W +V R ++ +G +K PGLSWI
Sbjct: 647 INPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWI 692
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 207/478 (43%), Gaps = 25/478 (5%)
Query: 22 TKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
K +H IL+ + F +L Y A NLFD+ P+R+ N A+
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN----NVSFVTLAQ 123
Query: 82 AHKFDEALSFYAKMLRT--ETKPDNFTYACLIRGCHENFDLDGLRI---LHXXXXXXXXX 136
+ + + Y+++ R E P FT + LD I LH
Sbjct: 124 GYACQDPIGLYSRLHREGHELNPHVFTSFLKLF-----VSLDKAEICPWLHSPIVKLGYD 178
Query: 137 XXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM 196
AYS V A VF GI +D+V+ ++S Y G++ L+L + M
Sbjct: 179 SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
Query: 197 REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC 256
R G P+ +T + + +G+HG LK+ + + VG L+ +Y++
Sbjct: 239 RMAG-FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGD 297
Query: 257 MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
M+ A+ VF + + D+V WS +I F Q +A+ + + A + ++S+L
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
A LG ++HG V++ G + +I VS+ALID+Y KC + + +F + ++N VS+
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSW 417
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
N+VI G G +AF +F E L + E T S L AC + G ++
Sbjct: 418 NTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVH----- 472
Query: 437 EFCIPPRTEHYIHI----VKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
I + + + + G+++ A + V + M+ +D W AL+S HG
Sbjct: 473 GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQS-VFNEMETIDVASWNALISGYSTHG 529
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 228/404 (56%), Gaps = 1/404 (0%)
Query: 147 TAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDG 206
AYSK V A +VF G+ ER LV N MI Y+ + L +F MR G + +
Sbjct: 96 NAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSE- 154
Query: 207 FTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIG 266
FT+ ++S + +H L +K+ D N YVG+AL+++Y++ + A VF
Sbjct: 155 FTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFES 214
Query: 267 LYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
+ V WS+++ G++Q ++Y++AL YR + + ++S++ A + L + G
Sbjct: 215 MQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG 274
Query: 327 TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLH 386
++H + + G SN+ V+S+ +DMY KCG + ++F ++ +N+ +N++ISG H
Sbjct: 275 KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKH 334
Query: 387 GLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEH 446
+ LFE+M + G+ P+E T S LL C H GLV++G+ F+ M + + P H
Sbjct: 335 ARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 394
Query: 447 YIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNE 506
Y +V +LG AG L EAY + S+ + IWG+LL+ C V+ N ELAE+ +++LF+ E
Sbjct: 395 YSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELE 454
Query: 507 PRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
P V+LSNIYA++ +W+++ ++R + + +K+ G SWI
Sbjct: 455 PENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWI 498
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 149/339 (43%), Gaps = 2/339 (0%)
Query: 22 TKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
K H I+R L + ++ Y+ + A +FD +RS+ WN+MI + +
Sbjct: 72 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 131
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
EAL + +M K FT + ++ C N D + LH
Sbjct: 132 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 191
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
Y+K + +A +VF + ++ V ++M++GY + + L L+ + +
Sbjct: 192 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 251
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
+Q + FTL +I + + L G+ +H + KSGF N +V S+ V+MY++ + +Y
Sbjct: 252 EQ-NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 310
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLT 321
+F + + +L W+ +I+GF + K+ + + + G + + +SLL
Sbjct: 311 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 370
Query: 322 DVRLGTEIHGYV-LRHGLESNIIVSSALIDMYLKCGFVG 359
V G + +GL N++ S ++D+ + G +
Sbjct: 371 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 409
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 142/298 (47%), Gaps = 10/298 (3%)
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
+ HG ++ + + + + L+N YS+ + A VF G+ + LV+W+ +I + +
Sbjct: 72 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 131
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIV 344
+AL + + G K I+S+L A D ++H ++ ++ N+ V
Sbjct: 132 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 191
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
+AL+D+Y KCG + + VFE+M++++ V+++S+++G + +A L+ L
Sbjct: 192 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 251
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI---HIVKLLGMAGELE 461
+ ++ TLS ++CAC + + +G++ M C + V + G L
Sbjct: 252 EQNQFTLSSVICACSNLAALIEGKQ----MHAVICKSGFGSNVFVASSAVDMYAKCGSLR 307
Query: 462 EAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDN--EPRKGAYKVMLS 517
E+Y + S +Q + +W ++S H + I+ +++ + P + + +LS
Sbjct: 308 ESY-IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 364
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 6/269 (2%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K+LH L +++ + + T +L YA + A +F+ +S W+SM+ + +
Sbjct: 174 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 233
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
++EAL Y + R + + FT + +I C L + +H
Sbjct: 234 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 293
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y+K + E+ +FS + E++L L N +ISG++ + + LF M++ G
Sbjct: 294 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG-M 352
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKS-GFDCNAYVGSALVNMYSRFKCMNSAY 261
P+ T L+S L+ G+ L + G N S +V++ R ++ AY
Sbjct: 353 HPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAY 412
Query: 262 GVFIGL-YQPDLVAWSALITGFLQCEDYK 289
+ + + P W +L+ C YK
Sbjct: 413 ELIKSIPFDPTASIWGSLLAS---CRVYK 438
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%)
Query: 309 LIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENM 368
L+ +L A+ V HG ++R LE ++ + + LI+ Y KCGFV L VF+ M
Sbjct: 55 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 114
Query: 369 RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
R++VS+N++I + + ++A +F EM +G K E T+S +L AC
Sbjct: 115 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 164
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/535 (28%), Positives = 265/535 (49%), Gaps = 10/535 (1%)
Query: 23 KQLHALILRSHL--SHESFYATKILRFY-ALNDDLISAYNLFDKTPQRSIFLWNSMIRAF 79
KQ+H L+L S + + + +++LR A L + SI LW+S+I F
Sbjct: 18 KQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHF 77
Query: 80 AKAHKFDEALSF--YAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
+ + LSF Y M R P T+ L++ + D + + H
Sbjct: 78 SGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLDS 136
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
+ YS AS++F G ++D+V AMI G+ G + + F M+
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG-FDCNAYVGSALVNMYSRFKC 256
+ G + T+V ++ + G+ +HGL L++G C+ ++GS+LV+MY + C
Sbjct: 197 KTG-VAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 255
Query: 257 MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
+ A VF + ++V W+ALI G++Q + K + + + + + ++S+L A
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
A + + G +H Y++++ +E N + LID+Y+KCG + ILVFE + +N+ ++
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
++I+G HG A AF LF ML + P+E T +L AC H GLV++G+ +F M
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKG 435
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL-MQPVDSGIWGALLSCCDVHGNTELA 495
F + P+ +HY +V L G G LEEA + + M+P + +WGAL C +H + EL
Sbjct: 436 RFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV-VWGALFGSCLLHKDYELG 494
Query: 496 EIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ + ++ +P +L+N+Y+ WD+V R R + + K PG SWI
Sbjct: 495 KYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI 549
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 276/536 (51%), Gaps = 15/536 (2%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF---DKTPQRSIFLWNSMIR 77
Q+HA + +S +S A ++ Y+ + D+ + +F D +++I N MI
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 78 AFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI---LHXXXXXXX 134
+F+++ K +A+ + +ML+ + D F+ L+ LD L + +H
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV------LDCLNLGKQVHGYTLKSG 480
Query: 135 XXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFN 194
T YSK + E+ K+F GI +D +MISG++ G+ + + LF+
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 195 GMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF 254
M + G PD TL +++ L G+ IHG L++G D +GSALVNMYS+
Sbjct: 541 EMLDDGTS-PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKC 599
Query: 255 KCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLL 314
+ A V+ L + D V+ S+LI+G+ Q + +R++ ++G D I+S+L
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 315 VASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIV 374
A+A + LG ++H Y+ + GL + V S+L+ MY K G + F + +++
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 375 SYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
++ ++I+ HG A +A +++ M EKG KPD+ T G+L AC H GLV++ M
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Query: 435 MDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTEL 494
+ ++ I P HY+ +V LG +G L EA +F+ ++ D+ +WG LL+ C +HG EL
Sbjct: 780 VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Query: 495 AEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++ +++ + EP + LSNI A G WD+V+ TR + G +K PG S +
Sbjct: 840 GKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 219/478 (45%), Gaps = 23/478 (4%)
Query: 22 TKQLHALILRSHL-SHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFA 80
TK L A +LR +L + F +L +Y+ + + A LFD PQ + N MI +
Sbjct: 67 TKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK 126
Query: 81 KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
+ F+E+L F++KM + + +Y +I C ++
Sbjct: 127 QHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV 186
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
+SK +A KVF ++ N +I+G +G LF+ M +G
Sbjct: 187 VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC-VG 245
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
Q+PD +T +++ L G+ + +K G + + +V +A+V++Y++ M A
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEA 304
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
VF + P +V+W+ +++G+ + D AL ++ + +G + + + S++ A +
Sbjct: 305 MEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENM---RNRNIVSYN 377
+ V +++H +V + G + V++ALI MY K G + L VFE++ + +NIV N
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--N 422
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCA--CCHAGLVKDGQEIFRRMM 435
+I+ +A +LF ML++GL+ DE ++ LL C + G G + ++
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLV 482
Query: 436 DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPV---DSGIWGALLSCCDVHG 490
+ + + L G LEE+Y L Q + D+ W +++S + +G
Sbjct: 483 LDLTVGSS------LFTLYSKCGSLEESYK----LFQGIPFKDNACWASMISGFNEYG 530
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 23/279 (8%)
Query: 15 SHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNS 74
SH + R K++H LR+ + + ++ Y+ L A ++D+ P+ +S
Sbjct: 563 SHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSS 622
Query: 75 MIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXX 134
+I +++ + + M+ + D+F + +++ + + +H
Sbjct: 623 LISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIG 682
Query: 135 XXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFN 194
T YSKF + + K FS I DL+ A+I+ Y+ G + LQ++N
Sbjct: 683 LCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYN 742
Query: 195 GMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSR- 253
M+E G +PD T VG++S G GL +S F N+ V + +R
Sbjct: 743 LMKEKGF-KPDKVTFVGVLS--------ACSHG--GLVEESYFHLNSMVKDYGIEPENRH 791
Query: 254 FKCMNSAYG---------VFIG--LYQPDLVAWSALITG 281
+ CM A G FI +PD + W L+
Sbjct: 792 YVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 260/518 (50%), Gaps = 8/518 (1%)
Query: 39 FYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRT 98
F + + YA D+ S+ +FD +R+I +WN+MI + + E++ + + + +
Sbjct: 252 FVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGS 311
Query: 99 -ETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSE 157
E D TY ++ R H YS+ V +
Sbjct: 312 KEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHK 371
Query: 158 ASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLM 217
+ VF + ERD+V N MIS + G +GL L M++ G + D T+ L+S
Sbjct: 372 SFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK-IDYITVTALLSAAS 430
Query: 218 DFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF--IGLYQPDLVAW 275
+ IG+ H ++ G + S L++MYS+ + + +F G + D W
Sbjct: 431 NLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATW 489
Query: 276 SALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLR 335
+++I+G+ Q +K +R + + + + +AS+L A +Q+ V LG ++HG+ +R
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 336 HGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKL 395
L+ N+ V+SAL+DMY K G + +F + RN V+Y ++I G G HG+ +A L
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 396 FEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLG 455
F M E G+KPD T +L AC ++GL+ +G +IF M + + I P +EHY I +LG
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLG 669
Query: 456 MAGELEEAYNFVLSLMQPVD-SGIWGALLSCCDVHGNTELAEIVSQQL--FDNEPRKGAY 512
G + EAY FV L + + + +WG+LL C +HG ELAE VS++L FD Y
Sbjct: 670 RVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGY 729
Query: 513 KVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+V+LSN+YA + +W V + R + G +K G S I
Sbjct: 730 EVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 217/481 (45%), Gaps = 37/481 (7%)
Query: 57 AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTE--TKPDNFTYACLIRGC 114
A LFD P+ + LWN++I F + EAL FY++M +T T D +TY+ ++ C
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 115 HENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSE------ASKVFSGIFER 168
E +L + +H Y + + KVF + +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 169 DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
++V N +IS Y G + + F M + + +P + V + + +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKPSPVSFVNVFPAVSISRSIKKANVF 236
Query: 229 HGLCLKSG--FDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCE 286
+GL LK G + + +V S+ ++MY+ + S+ VF + ++ W+ +I ++Q +
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 287 DYKKALFFYRNLSVAGKKADPILIASLLVASA--QLTDVRLGTEIHGYVLRHGLESNIIV 344
+++ + ++ K+ + LL ASA L V LG + HG+V ++ E I++
Sbjct: 297 CLVESIELFLE-AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
++L+ MY +CG V VF +MR R++VS+N++IS +GL + L EM ++G
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 415
Query: 405 KPDESTLSGLLCAC-----------CHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKL 453
K D T++ LL A HA L++ G + M+ + I ++ L
Sbjct: 416 KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF--EGMNSYLIDMYSKS-----GL 468
Query: 454 LGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYK 513
+ ++ +L E + D W +++S +G+TE +V +++ + R A
Sbjct: 469 IRISQKLFEGSGYA-----ERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 514 V 514
V
Sbjct: 524 V 524
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/548 (29%), Positives = 289/548 (52%), Gaps = 9/548 (1%)
Query: 7 SLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTP- 65
+LL L+++ +T + T+Q+HA ++ E + + Y ++ L A + F++ P
Sbjct: 9 ALLTILSQA-KTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPC 67
Query: 66 -QRSIFLWNSMIRAFAKAHK--FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDG 122
+R+ WN+++ ++K+ + + L Y +M R D+F I+ C L+
Sbjct: 68 WKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLEN 127
Query: 123 LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
++H Y++ + A KVF I R+ VL ++ GY
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGF-DCNA 241
+ +LF MR+ G D TL+ L+ + +G+ +HG+ ++ F D +
Sbjct: 188 YSKDPEVFRLFCLMRDTG-LALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 242 YVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVA 301
Y+ +++++MY + + +++A +F ++V W+ LI+GF +CE +A +R +
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLG 361
+ +A++LV+ + L +R G +HGY++R+G+E + + ++ IDMY +CG + +
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 362 ILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHA 421
VF+ M RN++S++S+I+ G++GL +A F +M + + P+ T LL AC H+
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 422 GLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL-MQPVDSGIWG 480
G VK+G + F M ++ + P EHY +V LLG AGE+ EA +F+ ++ ++P+ S WG
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASA-WG 485
Query: 481 ALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVG 540
ALLS C +H +LA ++++L EP K + V+LSNIYA G W+ V R + G
Sbjct: 486 ALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKG 545
Query: 541 ARKMPGLS 548
RK G S
Sbjct: 546 YRKHVGQS 553
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/482 (30%), Positives = 245/482 (50%), Gaps = 5/482 (1%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE-NFDLDGLRILHXXX 130
WN +R A F E++S Y MLR+ + PD F++ +++ C + + G + LH
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQ-LHCHV 79
Query: 131 XXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFS-GIFERDLVLC-NAMISGYSYCGFWGK 188
+ Y K V++A KVF L +C NA+ISGY+
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 189 GLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALV 248
+F M+E G D T++GL+ L +G+ +HG C+K G D V ++ +
Sbjct: 140 AAYMFRRMKETGVSV-DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 249 NMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPI 308
MY + + + +F + L+ W+A+I+G+ Q L Y + +G DP
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 309 LIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENM 368
+ S+L + A L ++G E+ V +G N+ VS+A I MY +CG + VF+ M
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 369 RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQ 428
+++VS+ ++I G+HG+ LF++M+++G++PD + +L AC H+GL G
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 429 EIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDV 488
E+FR M E+ + P EHY +V LLG AG L+EA F+ S+ D +WGALL C +
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 489 HGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLS 548
H N ++AE+ ++ + EP Y V++SNIY+ + + R R + RK PG S
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Query: 549 WI 550
++
Sbjct: 499 YV 500
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 102/262 (38%), Gaps = 9/262 (3%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ LH ++ L E + Y + + LFD+ P + + WN++I +++
Sbjct: 176 RSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQN 235
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXX---XXXX 139
+ L Y +M + PD FT ++ C L +I H
Sbjct: 236 GLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH---LGAKKIGHEVGKLVESNGFVPNV 292
Query: 140 XXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREI 199
+ Y++ ++++A VF + + LV AMI Y G GL LF+ M +
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 200 GKQQPDGFTLVGLISGLMDFSLLGIG-QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMN 258
G +PDG V ++S L G + + + + S LV++ R ++
Sbjct: 353 G-IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLD 411
Query: 259 SAYGVFIGL-YQPDLVAWSALI 279
A + +PD W AL+
Sbjct: 412 EAMEFIESMPVEPDGAVWGALL 433
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 271/592 (45%), Gaps = 66/592 (11%)
Query: 25 LHALILRSHLS-HESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
LHA L + +F +L Y+ D+ S FD+ PQR W +MI +
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
++ +A+ M++ +P FT ++ ++ + +H
Sbjct: 126 QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 144 XXXTAYSK-------------------------------FSHVSEASKVFSGIFERDLVL 172
Y+K + A F + ERD+V
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLC 232
N+MISG++ G+ + L +F+ M PD FTL ++S + L IG+ IH
Sbjct: 246 WNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHI 305
Query: 233 LKSGFDCNAYVGSALVNMYSR---------------------------------FKCMNS 259
+ +GFD + V +AL++MYSR MN
Sbjct: 306 VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQ 365
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
A +F+ L D+VAW+A+I G+ Q Y +A+ +R++ G++ + +A++L ++
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 425
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-NRNIVSYNS 378
L + G +IHG ++ G ++ VS+ALI MY K G + F+ +R R+ VS+ S
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 485
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEF 438
+I L HG A +A +LFE ML +GL+PD T G+ AC HAGLV G++ F M D
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVD 545
Query: 439 CIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIV 498
I P HY +V L G AG L+EA F+ + D WG+LLS C VH N +L ++
Sbjct: 546 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVA 605
Query: 499 SQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+++L EP L+N+Y++ G+W++ + R ++ + +K G SWI
Sbjct: 606 AERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/529 (29%), Positives = 260/529 (49%), Gaps = 6/529 (1%)
Query: 24 QLHALILRSHLSHESFYATKILRFY-ALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
Q HA +++S L + +L Y L + +FD + W SM+ +
Sbjct: 82 QFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTG 141
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ +AL + +M+ + FT + ++ C E ++ R H
Sbjct: 142 KEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFIS 201
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y +A +VF + E D++ A++S +S + + L LF M
Sbjct: 202 STLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGL 261
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
PDG T +++ + L G+ IHG + +G N V S+L++MY + + A
Sbjct: 262 VPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQ 321
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
VF G+ + + V+WSAL+ G+ Q +++KA+ +R + ++ D ++L A A L
Sbjct: 322 VFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAA 377
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISG 382
VRLG EIHG +R G N+IV SALID+Y K G + V+ M RN++++N+++S
Sbjct: 378 VRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSA 437
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
L +G +A F +M++KG+KPD + +L AC H G+V +G+ F M + I P
Sbjct: 438 LAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKP 497
Query: 443 RTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGN-TELAEIVSQQ 501
TEHY ++ LLG AG EEA N + D+ +WG LL C + + + +AE ++++
Sbjct: 498 GTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKR 557
Query: 502 LFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ + EP+ V+LSN+Y + GR D R +V G K G SWI
Sbjct: 558 MMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 4/261 (1%)
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRF-KCMNSAYGVFIGLYQPDLVAWSALITGFL 283
G H +KSG + + VG++L+++Y + M VF G + D ++W+++++G++
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV 139
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
+++ KAL + + G A+ ++S + A ++L +VRLG HG V+ HG E N
Sbjct: 140 TGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHF 199
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLE-K 402
+SS L +Y VF+ M +++ + +V+S + L +A LF M K
Sbjct: 200 ISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 259
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
GL PD ST +L AC + +K G+EI +++ I ++ + G G + E
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVRE 318
Query: 463 AYNFVLSLMQPVDSGIWGALL 483
A V + M +S W ALL
Sbjct: 319 ARQ-VFNGMSKKNSVSWSALL 338
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGI-- 362
A P L ASLL ++ G + H +V++ GLE++ V ++L+ +Y K +G G+
Sbjct: 59 ATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFK---LGPGMRE 115
Query: 363 --LVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCH 420
VF+ ++ +S+ S++SG +A ++F EM+ GL +E TLS + AC
Sbjct: 116 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 421 AGLVKDGQ 428
G V+ G+
Sbjct: 176 LGEVRLGR 183
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 224/398 (56%), Gaps = 9/398 (2%)
Query: 158 ASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFT---LVGLIS 214
A +VF + + + L N + GY + L L+ MR++G +PD FT +V IS
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLG-VRPDEFTYPFVVKAIS 120
Query: 215 GLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVA 274
L DFS G +H +K GF C V + LV MY +F ++SA +F + DLVA
Sbjct: 121 QLGDFS---CGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVA 177
Query: 275 WSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVL 334
W+A + +Q + AL ++ + + D + S+L A QL + +G EI+
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRAR 237
Query: 335 RHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFK 394
+ ++ NIIV +A +DM+LKCG ++FE M+ RN+VS++++I G ++G + +A
Sbjct: 238 KEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALT 297
Query: 395 LFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM--DEFCIPPRTEHYIHIVK 452
LF M +GL+P+ T G+L AC HAGLV +G+ F M+ ++ + PR EHY +V
Sbjct: 298 LFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVD 357
Query: 453 LLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAY 512
LLG +G LEEAY F+ + D+GIWGALL C VH + L + V+ L + P G+Y
Sbjct: 358 LLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSY 417
Query: 513 KVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V+LSNIYA+ G+WD V + R + +G +K+ S +
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 178/412 (43%), Gaps = 33/412 (8%)
Query: 8 LLQELTKSHQTRSRT-KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQ 66
+L EL ++ ++ + K++HA++LR+ S ++ T++L + D+ A +FD+ +
Sbjct: 12 MLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHK 71
Query: 67 RSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRIL 126
IFLWN++ + + + E+L Y KM +PD FTY +++ + D L
Sbjct: 72 PRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFAL 131
Query: 127 HXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFW 186
H Y KF +S A +F + +DLV NA ++ G
Sbjct: 132 HAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNS 191
Query: 187 GKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSA 246
L+ FN M Q D FT+V ++S L IG+ I+ K DCN V +A
Sbjct: 192 AIALEYFNKMC-ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENA 250
Query: 247 LVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKAD 306
++M+ + +A +F + Q ++V+WS +I G+ D ++AL + + G + +
Sbjct: 251 RLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPN 310
Query: 307 PILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFE 366
+ +L A + V G + ++SN +
Sbjct: 311 YVTFLGVLSACSHAGLVNEGKRYFSLM----VQSND-----------------------K 343
Query: 367 NMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
N+ R Y ++ LG GL +A++ ++M ++PD LL AC
Sbjct: 344 NLEPRK-EHYACMVDLLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLGAC 391
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 274/547 (50%), Gaps = 6/547 (1%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
FS LL++ ++ S K + A +L+S E +K++ D+ A +FD
Sbjct: 68 FSQLLRQCI-DERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFDGM 125
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE-NFDLDGL 123
+R I WNS+I K + EA+ Y M+ PD +T + + + + + + +
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 124 RILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYC 183
R Y KF EA V + E+D+VL A+I GYS
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 184 GFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYV 243
G + ++ F M + K QP+ +T ++ + +G G+ IHGL +KSGF+
Sbjct: 246 GEDTEAVKAFQSML-VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
++L+ MY R ++ + VF + P+ V+W++LI+G +Q + AL +R +
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI 364
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
K + ++S L + L G +IHG V ++G + + S LID+Y KCG + L
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARL 424
Query: 364 VFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGL 423
VF+ + +++S N++I +G +A LFE M+ GL+P++ T+ +L AC ++ L
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 424 VKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALL 483
V++G E+F + I +HY +V LLG AG LEEA ++ P D +W LL
Sbjct: 485 VEEGCELFDSFRKDK-IMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINP-DLVLWRTLL 542
Query: 484 SCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARK 543
S C VH E+AE +++++ + EP +++SN+YAS G+W+ V + + ++ +K
Sbjct: 543 SACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Query: 544 MPGLSWI 550
P +SW+
Sbjct: 603 NPAMSWV 609
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 234/475 (49%), Gaps = 12/475 (2%)
Query: 86 DEALSFYAK--MLRTETK--------PDNFTYACLIRGCHENFDLDGLRILHXXXXXXXX 135
DE+L F + +LRT + D Y L++ C L RI+H
Sbjct: 32 DESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIF 91
Query: 136 XXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNG 195
Y+K + EA KVF + +RD V +ISGYS L FN
Sbjct: 92 RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 196 MREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFK 255
M G P+ FTL +I G +HG C+K GFD N +VGSAL+++Y+R+
Sbjct: 152 MLRFG-YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210
Query: 256 CMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLV 315
M+ A VF L + V+W+ALI G + +KAL ++ + G + ASL
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 316 ASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS 375
A + + G +H Y+++ G + + L+DMY K G + +F+ + R++VS
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 330
Query: 376 YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM 435
+NS+++ HG +A FEEM G++P+E + +L AC H+GL+ +G + +M
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELM 389
Query: 436 DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
+ I P HY+ +V LLG AG+L A F+ + + IW ALL+ C +H NTEL
Sbjct: 390 KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELG 449
Query: 496 EIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++ +F+ +P V+L NIYAS GRW+D R R + G +K P SW+
Sbjct: 450 AYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 173/407 (42%), Gaps = 61/407 (14%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
+HA IL+S H+ +L YA L A +F+K PQR W ++I +++ +
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLI-------RGC--HENFDLDGLRILHXXXXXXXX 135
+AL F+ +MLR P+ FT + +I RGC H+ LH
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ---------LHGFCVKCGF 192
Query: 136 XXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNG 195
Y+++ + +A VF + R+ V NA+I+G++ K L+LF G
Sbjct: 193 DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQG 252
Query: 196 MREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFK 255
M G +P F+ L L G+ +H +KSG A+ G+ L++MY++
Sbjct: 253 MLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 311
Query: 256 CMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLV 315
++ A +F L + D+V+W++L+T + Q K+A++++ + G + + I S+L
Sbjct: 312 SIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLT 371
Query: 316 ASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS 375
A + G + G +E M+ IV
Sbjct: 372 ACSH-----------------------------------SGLLDEGWHYYELMKKDGIVP 396
Query: 376 ----YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
Y +V+ LG G +A + EEM ++P + LL AC
Sbjct: 397 EAWHYVTVVDLLGRAGDLNRALRFIEEM---PIEPTAAIWKALLNAC 440
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 2/259 (0%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
QLH ++ + +L Y + A +FD R+ WN++I A+
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
++AL + MLR +P +F+YA L C L+ + +H
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
Y+K + +A K+F + +RD+V N++++ Y+ GF + + F MR +G +
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-IR 360
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
P+ + + +++ LL G + L K G A+ +V++ R +N A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 264 FIGL-YQPDLVAWSALITG 281
+ +P W AL+
Sbjct: 421 IEEMPIEPTAAIWKALLNA 439
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K +HA +++S +F +L YA + + A +FD+ +R + WNS++ A+A+
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLD 121
EA+ ++ +M R +P+ ++ ++ C + LD
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLD 380
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 261/531 (49%), Gaps = 4/531 (0%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAF 79
+R K++H ++R + ++ Y D+ SA LFD+ P+R I WN+MI +
Sbjct: 213 ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY 272
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXX 139
+ E L + M PD T +I C D R +H
Sbjct: 273 FENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 140 XXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREI 199
Y EA K+FS + +D+V MISGY Y K + + M +
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ- 391
Query: 200 GKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
+PD T+ ++S L G +H L +K+ V + L+NMYS+ KC++
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDK 451
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
A +F + + ++++W+++I G +AL F R + + + + I + + L A A+
Sbjct: 452 ALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACAR 510
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
+ + G EIH +VLR G+ + + +AL+DMY++CG + F N + +++ S+N +
Sbjct: 511 IGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNIL 569
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
++G G + +LF+ M++ ++PDE T LLC C + +V+ G F +M D +
Sbjct: 570 LTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YG 628
Query: 440 IPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVS 499
+ P +HY +V LLG AGEL+EA+ F+ + D +WGALL+ C +H +L E+ +
Sbjct: 629 VTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSA 688
Query: 500 QQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
Q +F+ + + Y ++L N+YA G+W +V + R + G G SW+
Sbjct: 689 QHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 194/379 (51%), Gaps = 3/379 (0%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRT-ETKPDNFTYACLI 111
+L+ A+ +F K +R++F WN ++ +AK FDEA+ Y +ML KPD +T+ C++
Sbjct: 144 NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL 203
Query: 112 RGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLV 171
R C DL + +H T Y K V A +F + RD++
Sbjct: 204 RTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDII 263
Query: 172 LCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGL 231
NAMISGY G +GL+LF MR + PD TL +IS +G+ IH
Sbjct: 264 SWNAMISGYFENGMCHEGLELFFAMRGLS-VDPDLMTLTSVISACELLGDRRLGRDIHAY 322
Query: 232 CLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKA 291
+ +GF + V ++L MY A +F + + D+V+W+ +I+G+ KA
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 382
Query: 292 LFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDM 351
+ YR + K D I +A++L A A L D+ G E+H ++ L S +IV++ LI+M
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442
Query: 352 YLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTL 411
Y KC + + +F N+ +N++S+ S+I+GL L+ +A +F ++ L+P+ TL
Sbjct: 443 YSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITL 501
Query: 412 SGLLCACCHAGLVKDGQEI 430
+ L AC G + G+EI
Sbjct: 502 TAALAACARIGALMCGKEI 520
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 168/352 (47%), Gaps = 6/352 (1%)
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
K +EA+ M D + L+R C + ++
Sbjct: 74 KLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGN 133
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
+ +F ++ +A VF + ER+L N ++ GY+ G++ + + L++ M +G +
Sbjct: 134 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 193
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
PD +T ++ L G+ +H ++ G++ + V +AL+ MY + + SA +
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 264 FIGLYQPDLVAWSALITGFLQ---CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
F + + D+++W+A+I+G+ + C + + F R LSV D + + S++ A L
Sbjct: 254 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV---DPDLMTLTSVISACELL 310
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
D RLG +IH YV+ G +I V ++L MYL G +F M ++IVS+ ++I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFR 432
SG + L +A + M + +KPDE T++ +L AC G + G E+ +
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/546 (27%), Positives = 280/546 (51%), Gaps = 12/546 (2%)
Query: 9 LQELTKSHQTRSRTKQLHALILRS-HLSHESFYATKILRFYALNDDLISAYNLFDKTPQR 67
LQ ++K + Q+HA ++ + +L + S + ++ ++ A +FD+ PQR
Sbjct: 23 LQSISK---LKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQR 79
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
+ ++NSMI +++ DE L Y +M+ + +PD+ T+ I+ C L+ +
Sbjct: 80 GVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVW 139
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWG 187
Y K + EA +F + +RD++ M++G++ G
Sbjct: 140 CKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSL 199
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
K ++ + M+ G + D ++GL+ D +G+ +HG ++G N V ++L
Sbjct: 200 KAVEFYREMQNEGFGR-DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSL 258
Query: 248 VNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADP 307
V+MY++ + A VF + V+W +LI+GF Q KA + G + D
Sbjct: 259 VDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDL 318
Query: 308 ILIASLLVASAQLTDVRLGTEIHGYVL-RHGLESNIIVSSALIDMYLKCGFVGLGILVFE 366
+ + +LVA +Q+ ++ G +H Y+L RH L+ + ++AL+DMY KCG + +FE
Sbjct: 319 VTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR--VTATALMDMYSKCGALSSSREIFE 376
Query: 367 NMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKD 426
++ +++V +N++IS G+HG + LF +M E ++PD +T + LL A H+GLV+
Sbjct: 377 HVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQ 436
Query: 427 GQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG--IWGALLS 484
GQ F M++++ I P +HY+ ++ LL AG +EEA + + S + +D+ IW ALLS
Sbjct: 437 GQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINS--EKLDNALPIWVALLS 494
Query: 485 CCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKM 544
C H N + +I + ++ P + ++SN +A+ +W +V + R + N K+
Sbjct: 495 GCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKV 554
Query: 545 PGLSWI 550
PG S I
Sbjct: 555 PGYSAI 560
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/555 (29%), Positives = 277/555 (49%), Gaps = 9/555 (1%)
Query: 1 MSVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNL 60
M + S+L EL + KQ+ ++ L + K++ F + D S ++
Sbjct: 1 MYLPEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSV 60
Query: 61 FDKTPQR--SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENF 118
+ + S F +N+++ ++A K + Y + PD FT+ + + C +
Sbjct: 61 ILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFS 120
Query: 119 DLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMIS 178
+ + +H Y A KVF + RD+V +I+
Sbjct: 121 GIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIIT 180
Query: 179 GYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFD 238
G++ G + + L F+ M +P+ T V ++ L +G+GIHGL LK
Sbjct: 181 GFTRTGLYKEALDTFSKM----DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 239 CNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL-FFYRN 297
+ G+AL++MY + + ++ A VF L + D V+W+++I+G + CE K+A+ F
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
Query: 298 LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGF 357
+ +G K D ++ S+L A A L V G +H Y+L G++ + + +A++DMY KCG+
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGY 356
Query: 358 VGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCA 417
+ + +F +R++N+ ++N+++ GL +HG ++ + FEEM++ G KP+ T L A
Sbjct: 357 IETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNA 416
Query: 418 CCHAGLVKDGQEIFRRMMD-EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDS 476
CCH GLV +G+ F +M E+ + P+ EHY ++ LL AG L+EA V ++ D
Sbjct: 417 CCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDV 476
Query: 477 GIWGALLSCCDVHGN-TELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDN 535
I GA+LS C G EL + + D E V+LSNI+A++ RWDDV R R
Sbjct: 477 RICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRL 536
Query: 536 IVNVGARKMPGLSWI 550
+ G K+PG S+I
Sbjct: 537 MKVKGISKVPGSSYI 551
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/532 (28%), Positives = 263/532 (49%), Gaps = 6/532 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ +HA +++S + F T + + + + A +F++ P+R WN+M+ F ++
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
D+A S + +M E PD+ T LI+ L L +H
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 143 XXXXTAYSKFSHVSEASKVFSGIF--ERDLVLCNAMISGYSYCGFWGKGLQLFNGM-REI 199
+ Y K + A VF I +R +V N+M YS G L+ M RE
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE- 250
Query: 200 GKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
+ +PD T + L + + L G+ IH + G D + + ++MYS+ + S
Sbjct: 251 -EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
A +F + V+W+ +I+G+ + D +AL + + +G+K D + + SL+ +
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Query: 320 LTDVRLGTEIHGYVLRHGLE-SNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNS 378
+ G I +G + N+++ +ALIDMY KCG + +F+N + +V++ +
Sbjct: 370 FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEF 438
+I+G L+G+ +A KLF +M++ KP+ T +L AC H+G ++ G E F M +
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 439 CIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIV 498
I P +HY +V LLG G+LEEA + ++ D+GIWGALL+ C +H N ++AE
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQA 549
Query: 499 SQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++ LF+ EP+ A V ++NIYA+ G WD R R + +K PG S I
Sbjct: 550 AESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 159/368 (43%), Gaps = 3/368 (0%)
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
S+ WN IR + E+L + +M R +P+NFT+ + + C D+ ++H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWG 187
+ K + V A+KVF + ERD NAM+SG+ G
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
K LF MR + + PD T++ LI L + + +H + ++ G D V +
Sbjct: 136 KAFSLFREMR-LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 248 VNMYSRFKCMNSAYGVFIGLYQPD--LVAWSALITGFLQCEDYKKALFFYRNLSVAGKKA 305
++ Y + ++SA VF + + D +V+W+++ + + A Y + K
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 306 DPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF 365
D +L + + G IH + + G + +I + I MY K L+F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 366 ENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVK 425
+ M +R VS+ +ISG G +A LF M++ G KPD TL L+ C G ++
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 426 DGQEIFRR 433
G+ I R
Sbjct: 375 TGKWIDAR 382
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 125/296 (42%), Gaps = 18/296 (6%)
Query: 18 TRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIR 77
T+ R HA+ L + E+ + Y+ ++D SA LFD R+ W MI
Sbjct: 273 TQGRLIHSHAIHLGTDQDIEAI--NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 78 AFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLD-GLRILHXXXXXXXXX 136
+A+ DEAL+ + M+++ KPD T LI GC + L+ G I
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKR 390
Query: 137 XXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM 196
YSK + EA +F E+ +V MI+GY+ G + + L+LF+ M
Sbjct: 391 DNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM 450
Query: 197 REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG--SALVNMYSRF 254
++ +P+ T + ++ L G + +K ++ + + S +V++ R
Sbjct: 451 IDL-DYKPNHITFLAVLQACAHSGSLEKGWEYFHI-MKQVYNISPGLDHYSCMVDLLGRK 508
Query: 255 KCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPIL 309
+ A + + +PD W AL+ A +RN+ +A + A+ +
Sbjct: 509 GKLEEALELIRNMSAKPDAGIWGALLN----------ACKIHRNVKIAEQAAESLF 554
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 266/531 (50%), Gaps = 6/531 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ +H L+++S + A+ ++ YA + ++ +FD+ P+R + WN++I F ++
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ ++AL + +M + +P++ + I C L+ + +H
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y K + A +VF + + LV N+MI GY G +++ N M I
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI-IEGT 305
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC--MNSA 260
+P TL ++ L G+ IHG ++S + + YV +L+++Y FKC N A
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLY--FKCGEANLA 363
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
VF + +W+ +I+ ++ ++ KA+ Y + G K D + S+L A +QL
Sbjct: 364 ETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
+ G +IH + LE++ ++ SAL+DMY KCG +F ++ +++VS+ +I
Sbjct: 424 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMI 483
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCI 440
S G HG +A F+EM + GLKPD TL +L AC HAGL+ +G + F +M ++ I
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543
Query: 441 PPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG-IWGALLSCCDVHGNTELAEIVS 499
P EHY ++ +LG AG L EAY + + D+ + L S C +H L + ++
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIA 603
Query: 500 QQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ L +N P + ++L N+YAS WD +R R + +G RK PG SWI
Sbjct: 604 RLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 238/503 (47%), Gaps = 19/503 (3%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
S K SLL+E T S ++ R K +H IL L + ++ Y D SA ++F
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF 62
Query: 62 DKTPQRS-IFLWNSMIRAFAKAHKFDEALSFYAKMLRTET-KPDNFTYACLIRGCHENFD 119
+ RS +++WNS++ ++K F + L + ++L PD+FT+ +I+ +
Sbjct: 63 ENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA-YGALG 121
Query: 120 LDGL-RILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMIS 178
+ L R++H Y+KF+ + +VF + ERD+ N +IS
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 179 GYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFD 238
+ G K L+LF M G +P+ +L IS L G+ IH C+K GF+
Sbjct: 182 CFYQSGEAEKALELFGRMESSG-FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 239 CNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNL 298
+ YV SALV+MY + C+ A VF + + LVAW+++I G++ D K + +
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 299 SVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFV 358
+ G + + S+L+A ++ ++ G IHGYV+R + ++I V+ +LID+Y KCG
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 359 GLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
L VF + S+N +IS G +A +++++M+ G+KPD T + +L AC
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 419 CHAGLVKDGQEIF------RRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ 472
++ G++I R DE + + Y G +EA+ S+ +
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMY-------SKCGNEKEAFRIFNSIPK 473
Query: 473 PVDSGIWGALLSCCDVHGNTELA 495
D W ++S HG A
Sbjct: 474 K-DVVSWTVMISAYGSHGQPREA 495
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 164/407 (40%), Gaps = 49/407 (12%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFA 80
R K++H ++ + + + ++ Y D L A +F K P++S+ WNSMI+ +
Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 81 KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
+ +M+ T+P T ++ C + +L + +H
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y K + A VFS + N MIS Y G W K +++++ M +G
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
+PD T ++ + L G+ IH +S + + + SAL++MYS+ A
Sbjct: 406 -VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA 464
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
+ +F + + D+V+W+ +I+ + ++AL+ + + G K D + + ++L A
Sbjct: 465 FRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA---- 520
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGL---GILVFENMRNRN----- 372
CG GL G+ F MR++
Sbjct: 521 ----------------------------------CGHAGLIDEGLKFFSQMRSKYGIEPI 546
Query: 373 IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
I Y+ +I LG G +A+++ ++ E + LS L ACC
Sbjct: 547 IEHYSCMIDILGRAGRLLEAYEIIQQTPETS--DNAELLSTLFSACC 591
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/507 (30%), Positives = 247/507 (48%), Gaps = 2/507 (0%)
Query: 44 ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPD 103
+L YA L+ A LFD+ P R + N + F + + + +ML + D
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS-GGFD 154
Query: 104 NFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFS 163
+ T ++ C +++H T+Y K VF
Sbjct: 155 HATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFD 214
Query: 164 GIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLG 223
G+ R+++ A+ISG GL+LF+ MR G P+ T + ++ +
Sbjct: 215 GMSHRNVITLTAVISGLIENELHEDGLRLFSLMRR-GLVHPNSVTYLSALAACSGSQRIV 273
Query: 224 IGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
GQ IH L K G + + SAL++MYS+ + A+ +F + D V+ + ++ G
Sbjct: 274 EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
Q ++A+ F+ + AG + D +++++L S + LG ++H V++ N
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
V++ LI+MY KCG + VF M RN VS+NS+I+ HG A KL+EEM
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEA 463
+KP + T LL AC H GL+ G+E+ M + I PRTEHY I+ +LG AG L+EA
Sbjct: 454 VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEA 513
Query: 464 YNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASD 523
+F+ SL D IW ALL C HG+TE+ E ++QLF P + ++++NIY+S
Sbjct: 514 KSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSR 573
Query: 524 GRWDDVKRTRDNIVNVGARKMPGLSWI 550
G+W + +T + +G K G+S I
Sbjct: 574 GKWKERAKTIKRMKAMGVTKETGISSI 600
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 137/284 (48%), Gaps = 29/284 (10%)
Query: 161 VFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFN--GMREI------------GKQQPDG 206
V + I LV+ N+++S Y+ CG ++LF+ MR++ ++ G
Sbjct: 81 VDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESG 140
Query: 207 FTLVG--LISGLMDFSLLGI-------------GQGIHGLCLKSGFDCNAYVGSALVNMY 251
F L+ L SG D + L I + IH L + SG+D VG+ L+ Y
Sbjct: 141 FVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSY 200
Query: 252 SRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIA 311
+ C S GVF G+ +++ +A+I+G ++ E ++ L + + + +
Sbjct: 201 FKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYL 260
Query: 312 SLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR 371
S L A + + G +IH + ++G+ES + + SAL+DMY KCG + +FE+
Sbjct: 261 SALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEV 320
Query: 372 NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL 415
+ VS ++ GL +G +A + F ML+ G++ D + +S +L
Sbjct: 321 DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 140/338 (41%), Gaps = 2/338 (0%)
Query: 22 TKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
TK +HAL + S E K++ Y +S +FD R++ ++I +
Sbjct: 174 TKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIE 233
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
++ L ++ M R P++ TY + C + + + +H
Sbjct: 234 NELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCI 293
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
YSK + +A +F E D V ++ G + G + +Q F M + G
Sbjct: 294 ESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGV 353
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
+ L +D S LG+G+ +H L +K F N +V + L+NMYS+ + +
Sbjct: 354 EIDANVVSAVLGVSFIDNS-LGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLT 321
VF + + + V+W+++I F + AL Y ++ K + SLL A + +
Sbjct: 413 TVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVG 472
Query: 322 DVRLGTEIHGYVLR-HGLESNIIVSSALIDMYLKCGFV 358
+ G E+ + HG+E + +IDM + G +
Sbjct: 473 LIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/500 (29%), Positives = 244/500 (48%), Gaps = 2/500 (0%)
Query: 56 SAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCH 115
+AY +FDK + ++ W MI + EA+ F+ M+ + + D FT + + C
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 116 ENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAY-SKFSHVSEASKVFSGIFERDLVLCN 174
E +L + LH A S V + KVF + + ++
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 175 AMISGY-SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
A+I+GY C + + LF+ M G +P+ FT + S +G+ + G
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 234 KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALF 293
K G N+ V +++++M+ + M A F L + +LV+++ + G + ++++A
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 294 FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYL 353
++ ASLL A + +R G +IH V++ GL N V +ALI MY
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 354 KCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSG 413
KCG + VF M NRN++S+ S+I+G HG A + + F +M+E+G+KP+E T
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580
Query: 414 LLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQP 473
+L AC H GLV +G F M ++ I P+ EHY +V LL AG L +A+ F+ ++
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 474 VDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTR 533
D +W L C VH NTEL ++ ++++ + +P + A + LSNIYA G+W++ R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700
Query: 534 DNIVNVGARKMPGLSWIGGG 553
+ K G SWI G
Sbjct: 701 RKMKERNLVKEGGCSWIEVG 720
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 303 KKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGI 362
+ D + +SLL + + D RLG +H ++ +E + ++ ++LI +Y K G
Sbjct: 58 RPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE 117
Query: 363 LVFENMR---NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
VFE MR R++VS++++++ G +G A K+F E LE GL P++ + ++ AC
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 420 HAGLVKDGQ 428
++ V G+
Sbjct: 178 NSDFVGVGR 186
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 105/228 (46%), Gaps = 5/228 (2%)
Query: 196 MREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFK 255
M G + D T L+ + +G+ +H ++ + ++ + ++L+++YS+
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 256 CMNSAYGVFIGLY---QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIAS 312
A VF + + D+V+WSA++ + A+ + G + +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 313 LLVASAQLTDVRLGTEIHGYVLRHG-LESNIIVSSALIDMYLKC-GFVGLGILVFENMRN 370
++ A + V +G G++++ G ES++ V +LIDM++K VF+ M
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 371 RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
N+V++ +I+ G +A + F +M+ G + D+ TLS + AC
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 206/332 (62%), Gaps = 3/332 (0%)
Query: 224 IGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
+G+ IH + ++SGF YV ++L+++Y+ + SAY VF + + DLVAW+++I GF
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
+ ++AL Y ++ G K D I SLL A A++ + LG +H Y+++ GL N+
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLE-K 402
S+ L+D+Y +CG V +F+ M ++N VS+ S+I GL ++G +A +LF+ M +
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
GL P E T G+L AC H G+VK+G E FRRM +E+ I PR EH+ +V LL AG++++
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Query: 463 AYNFVLSL-MQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYA 521
AY ++ S+ MQP + IW LL C VHG+++LAE Q+ EP V+LSN+YA
Sbjct: 246 AYEYIKSMPMQP-NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 522 SDGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
S+ RW DV++ R ++ G +K+PG S + G
Sbjct: 305 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVG 336
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 139/321 (43%), Gaps = 7/321 (2%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ +H++++RS + +L YA D+ SAY +FDK P++ + WNS+I FA+
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
K +EAL+ Y +M KPD FT L+ C + L + +H
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y++ V EA +F + +++ V ++I G + GF + ++LF M
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 203 QPDGFTLVGLISGLMDFSLLGIG-QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
P T VG++ ++ G + + + + +V++ +R + AY
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 247
Query: 262 GVFIGL-YQPDLVAWSALITGFLQCEDYKKALFFYRNLSV--AGKKADPILIASLLVASA 318
+ QP++V W L+ D A F + D +L++++ +
Sbjct: 248 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 307
Query: 319 QLTDVRLGTEIHGYVLRHGLE 339
+ +DV+ +I +LR G++
Sbjct: 308 RWSDVQ---KIRKQMLRDGVK 325
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
+ DVRLG IH V+R G S I V ++L+ +Y CG V VF+ M +++V++NSV
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
I+G +G +A L+ EM KG+KPD T+ LL AC G + G+ + M+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 440 IPPRTEHYIHI-VKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
R H ++ + L G +EEA M +S W +L+ V+G
Sbjct: 121 T--RNLHSSNVLLDLYARCGRVEEAKTL-FDEMVDKNSVSWTSLIVGLAVNG 169
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 260/513 (50%), Gaps = 4/513 (0%)
Query: 34 LSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYA 93
L + + + ++ Y +I A +FD+ + I W+SM+ F K +A+ F+
Sbjct: 73 LGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFR 132
Query: 94 KM-LRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKF 152
+M + ++ PD T L+ C + + R +H Y+K
Sbjct: 133 RMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKS 192
Query: 153 SHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGL 212
EA +F I E+D++ + +I+ Y G + L +FN M + G +P+ T++ +
Sbjct: 193 RAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG-TEPNVATVLCV 251
Query: 213 ISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL 272
+ L G+ H L ++ G + V +ALV+MY + AY VF + + D+
Sbjct: 252 LQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDV 311
Query: 273 VAWSALITGF-LQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHG 331
V+W ALI+GF L ++ F L + D IL+ +L + ++L + H
Sbjct: 312 VSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHS 371
Query: 332 YVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQ 391
YV+++G +SN + ++L+++Y +CG +G VF + ++ V + S+I+G G+HG +
Sbjct: 372 YVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTK 431
Query: 392 AFKLFEEMLEKG-LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHI 450
A + F M++ +KP+E T +L AC HAGL+ +G IF+ M++++ + P EHY +
Sbjct: 432 ALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVL 491
Query: 451 VKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKG 510
V LLG G+L+ A + I G LL C +H N E+AE V+++LF+ E
Sbjct: 492 VDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHA 551
Query: 511 AYKVMLSNIYASDGRWDDVKRTRDNIVNVGARK 543
Y +++SN+Y G W++V++ R+++ G +K
Sbjct: 552 GYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 584
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 213/427 (49%), Gaps = 4/427 (0%)
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI 125
+RS++ WN+++++ ++ +++E L ++ M R E KPDNFT ++ C E +++ +
Sbjct: 3 KRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEM 62
Query: 126 LHXXXXXXXXXXXXXXXXXXXT-AYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
+H Y K + EA ++F + + D+V ++M+SG+ G
Sbjct: 63 IHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNG 122
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
+ ++ F M PD TL+ L+S S +G+ +HG ++ GF + +
Sbjct: 123 SPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLV 182
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
++L+N Y++ + A +F + + D+++WS +I ++Q +AL + ++ G +
Sbjct: 183 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 242
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILV 364
+ + +L A A D+ G + H +R GLE+ + VS+AL+DMY+KC V
Sbjct: 243 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 302
Query: 365 FENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEM-LEKGLKPDESTLSGLLCACCHAGL 423
F + +++VS+ ++ISG L+G+A ++ + F M LE +PD + +L +C G
Sbjct: 303 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 362
Query: 424 VKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALL 483
++ + F + ++ +V+L G L A V + + D+ +W +L+
Sbjct: 363 LEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK-VFNGIALKDTVVWTSLI 420
Query: 484 SCCDVHG 490
+ +HG
Sbjct: 421 TGYGIHG 427
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 165/368 (44%), Gaps = 3/368 (0%)
Query: 3 VKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFD 62
V +L+ TK +R + +H ++R S++ +L YA + A NLF
Sbjct: 145 VTLITLVSACTKLSNSR-LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK 203
Query: 63 KTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDG 122
++ + W+++I + + EAL + M+ T+P+ T C+++ C DL+
Sbjct: 204 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 263
Query: 123 LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
R H Y K EA VFS I +D+V A+ISG++
Sbjct: 264 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 323
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
G + ++ F+ M +PD +V ++ + L + H +K GFD N +
Sbjct: 324 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPF 383
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAG 302
+G++LV +YSR + +A VF G+ D V W++LITG+ KAL + ++ +
Sbjct: 384 IGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSS 443
Query: 303 K-KADPILIASLLVASAQLTDVRLGTEIHGYVLR-HGLESNIIVSSALIDMYLKCGFVGL 360
+ K + + S+L A + + G I ++ + L N+ + L+D+ + G +
Sbjct: 444 EVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDT 503
Query: 361 GILVFENM 368
I + + M
Sbjct: 504 AIEITKRM 511
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/536 (28%), Positives = 261/536 (48%), Gaps = 13/536 (2%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
LH L++ + LS + F ++ Y+ L A +LFD+ +R WNS+I + +
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGC----HENFDLDGLRILHXXXXXXXXXXXXX 140
+E L+ AKM R + +++ C +E F G+ I H
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI-HCYTAKLGMEFDIV 288
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG-----FWGKGLQLFNG 195
Y+K + EA K+FS + +++V NAMISG+ + +LF
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD 348
Query: 196 MREIG-KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF 254
M+ G + P F++V + L G+ IH L K+ F + ++GSAL+ +Y+
Sbjct: 349 MQRRGLEPSPSTFSVV--LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Query: 255 KCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLL 314
F + D+ +W+++I +Q E + A +R L + + + ++ ++
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 315 VASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIV 374
A A + G +I GY ++ G+++ V ++ I MY K G + L VF ++N ++
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 375 SYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
+Y+++IS L HG A +A +FE M G+KP++ G+L ACCH GLV G + F+ M
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
Query: 435 MDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTEL 494
+++ I P +H+ +V LLG G L +A N +LS W ALLS C V+ ++ +
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVI 646
Query: 495 AEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ V+++L + EP V+L NIY G + R+ + + G +K P LSWI
Sbjct: 647 GKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 702
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 226/540 (41%), Gaps = 56/540 (10%)
Query: 57 AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE 116
A LFD+ P+R+I +NS+I + + +++A+ + + K D FTYA + C E
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 117 NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAM 176
DLD +LH YSK + +A +F ERD V N++
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 177 ISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGL--------MDFSLLGIGQGI 228
ISGY G + L L + K DG L G ++ + G I
Sbjct: 221 ISGYVRVGAAEEPLNL------LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDY 288
H K G + + V +AL++MY++ + A +F + ++V ++A+I+GFLQ ++
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 289 -----KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
+A + ++ G + P + +L A + + G +IH + ++ +S+
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
+ SALI++Y G G+ F + ++I S+ S+I + AF LF ++
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEI----FRRMMDEFC---------------IP--- 441
++P+E T+S ++ AC + G++I + +D F +P
Sbjct: 455 IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Query: 442 --------PRTEHYIHIVKLLGMAGELEEAYNFVLSL----MQPVDSGIWGALLSCCDVH 489
P Y ++ L G EA N S+ ++P G L++CC H
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC--H 572
Query: 490 GNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSW 549
G + Q N+ R + + + GR + + I++ G + P ++W
Sbjct: 573 GGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP-VTW 631
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 147/299 (49%), Gaps = 22/299 (7%)
Query: 224 IGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
+G+ HG +KS + Y+ + L+NMY + + + A +F + + +++++++LI+G+
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
Q Y++A+ + A K D A L + D+ LG +HG V+ +GL +
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
+ + LIDMY KCG + + +F+ R+ VS+NS+ISG G A + L +M G
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 404 LKPDESTLSGLLCACC---HAGLVKDGQEIF---RRMMDEFCIPPRTEHYIHIVKLLGMA 457
L L +L ACC + G ++ G I ++ EF I RT ++ +
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTA----LLDMYAKN 300
Query: 458 GELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQ------QLFDNEPRKG 510
G L+EA + SLM + + A++S G ++ EI + +LF + R+G
Sbjct: 301 GSLKEAIK-LFSLMPSKNVVTYNAMIS-----GFLQMDEITDEASSEAFKLFMDMQRRG 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 127/296 (42%), Gaps = 11/296 (3%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
FS +L+ + + +T +Q+HALI +++ + F + ++ YAL F T
Sbjct: 361 FSVVLKACSAA-KTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAST 419
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
++ I W SMI + + + A + ++ + +P+ +T + ++ C + L
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
+ + Y+K ++ A++VF + D+ +AMIS + G
Sbjct: 480 QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGL-CLKSGFDCNAYV 243
+ L +F M+ G +P+ +G++ L + QG+ C+K+ + N
Sbjct: 540 SANEALNIFESMKTHGI-KPNQQAFLGVLIACCHGGL--VTQGLKYFQCMKNDYRINPNE 596
Query: 244 G--SALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKALFFYR 296
+ LV++ R ++ A + + +Q V W AL++ C YK ++ R
Sbjct: 597 KHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSS---CRVYKDSVIGKR 649
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%)
Query: 313 LLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRN 372
L +A+ V LG HG++++ L + + + L++MY KC +G +F+ M RN
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 373 IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
I+S+NS+ISG G QA +LF E E LK D+ T +G L C
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC 158
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 261/534 (48%), Gaps = 11/534 (2%)
Query: 23 KQLHALILR----SHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRA 78
KQLHA +++ SHL ++ +RF ++D A +F P + + W+S+I
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSD----ASRVFYGIPMKDLISWSSIIAG 243
Query: 79 FAKAHKFDEALSFYAKMLRTET-KPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
F++ EALS +ML P+ + + ++ C D +H
Sbjct: 244 FSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAG 303
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
Y++ ++ A +VF I D N +I+G + G+ + + +F+ MR
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
G PD +L L+ L G IH +K GF + V ++L+ MY+ +
Sbjct: 364 SSGFI-PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDL 422
Query: 258 NSAYGVFIGLYQ-PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
+ +F D V+W+ ++T LQ E + L ++ + V+ + D I + +LL
Sbjct: 423 YCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRG 482
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
+++ ++LG+++H Y L+ GL + + LIDMY KCG +G +F++M NR++VS+
Sbjct: 483 CVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSW 542
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
+++I G G +A LF+EM G++P+ T G+L AC H GLV++G +++ M
Sbjct: 543 STLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQT 602
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
E I P EH +V LL AG L EA F+ + D +W LLS C GN LA+
Sbjct: 603 EHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQ 662
Query: 497 IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++ + +P V+L +++AS G W++ R ++ +K+PG SWI
Sbjct: 663 KAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWI 716
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 204/417 (48%), Gaps = 1/417 (0%)
Query: 15 SHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNS 74
S ++ ++ +++H IL S+ +++ IL Y L A +FD P+R++ + S
Sbjct: 79 SSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTS 138
Query: 75 MIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXX 134
+I +++ + EA+ Y KML+ + PD F + +I+ C + D+ + LH
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 135 XXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFN 194
Y +F+ +S+AS+VF GI +DL+ +++I+G+S GF + L
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 195 GMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF 254
M G P+ + + G IHGLC+KS NA G +L +MY+R
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318
Query: 255 KCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLL 314
+NSA VF + +PD +W+ +I G +A+ + + +G D I + SLL
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 315 VASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR-NI 373
A + + G +IH Y+++ G +++ V ++L+ MY C + +FE+ RN +
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438
Query: 374 VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
VS+N++++ H + +LF+ ML +PD T+ LL C +K G ++
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV 495
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 126/267 (47%), Gaps = 3/267 (1%)
Query: 153 SHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGL 212
S + S V S I +L+ N I+ F+ + L+ F+ ++ + T + L
Sbjct: 16 SQILATSSVVSTIKTEELM--NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISL 73
Query: 213 ISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL 272
I L G+ IH L S + + + +++MY + + A VF + + +L
Sbjct: 74 ICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNL 133
Query: 273 VAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGY 332
V+++++ITG+ Q +A+ Y + D S++ A A +DV LG ++H
Sbjct: 134 VSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQ 193
Query: 333 VLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQA 392
V++ S++I +ALI MY++ + VF + ++++S++S+I+G G +A
Sbjct: 194 VIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEA 253
Query: 393 FKLFEEMLEKGL-KPDESTLSGLLCAC 418
+EML G+ P+E L AC
Sbjct: 254 LSHLKEMLSFGVFHPNEYIFGSSLKAC 280
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 72/124 (58%)
Query: 312 SLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR 371
SL+ A + + G +IH ++L + + I+++ ++ MY KCG + VF+ M R
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 372 NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIF 431
N+VSY SVI+G +G A+A +L+ +ML++ L PD+ ++ AC + V G+++
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 432 RRMM 435
+++
Sbjct: 192 AQVI 195
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 213/394 (54%), Gaps = 2/394 (0%)
Query: 158 ASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLM 217
A+ +F GI + N MI GY + + L +N M + G +PD FT L+
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRG-NEPDNFTYPCLLKACT 143
Query: 218 DFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSA 277
+ G+ IHG K G + + +V ++L+NMY R M + VF L +WS+
Sbjct: 144 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSS 203
Query: 278 LITGFLQCEDYKKALFFYRNL-SVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRH 336
+++ + + L +R + S KA+ + S L+A A + LG IHG++LR+
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263
Query: 337 GLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLF 396
E NIIV ++L+DMY+KCG + + +F+ M RN ++Y+++ISGL LHG A ++F
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 397 EEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGM 456
+M+++GL+PD +L AC H+GLVK+G+ +F M+ E + P EHY +V LLG
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Query: 457 AGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVML 516
AG LEEA + S+ + IW LS C V N EL +I +Q+L +++
Sbjct: 384 AGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLI 443
Query: 517 SNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
SN+Y+ WDDV RTR I G ++ PG S +
Sbjct: 444 SNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIV 477
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 154/345 (44%), Gaps = 8/345 (2%)
Query: 57 AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE 116
A ++F F +N+MIR + F+EAL FY +M++ +PDNFTY CL++ C
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 117 NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAM 176
+ + +H Y + + +S VF + + ++M
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 177 ISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG 236
+S + G W + L LF GM + + +V + + L +G IHG L++
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 237 FDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYR 296
+ N V ++LV+MY + C++ A +F + + + + +SA+I+G + + AL +
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG-LESNIIVSSALIDMYLKC 355
+ G + D ++ S+L A + V+ G + +L+ G +E L+D+ +
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 356 GFVGLGILVFENM---RN----RNIVSYNSVISGLGLHGLAAQAF 393
G + + +++ +N R +S V + L +AAQ
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQEL 429
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 9/243 (3%)
Query: 257 MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
MN A +F G+ P ++ +I G++ +++AL FY + G + D LL A
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
+L +R G +IHG V + GLE+++ V ++LI+MY +CG + L VFE + ++ S+
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 377 NSVISGLGLHGLAAQAFKLFEEML-EKGLKPDESTLSGLLCACCHAGLVKDGQEI---FR 432
+S++S G+ ++ LF M E LK +ES + L AC + G + G I
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261
Query: 433 RMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNT 492
R + E I +T +V + G L++A + + M+ ++ + A++S +HG
Sbjct: 262 RNISELNIIVQTS----LVDMYVKCGCLDKALH-IFQKMEKRNNLTYSAMISGLALHGEG 316
Query: 493 ELA 495
E A
Sbjct: 317 ESA 319
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/514 (29%), Positives = 260/514 (50%), Gaps = 7/514 (1%)
Query: 41 ATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTET 100
AT ++ Y + A +LFD+ P R + W +MI +A ++ A + +M++ T
Sbjct: 48 ATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGT 107
Query: 101 KPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEAS- 159
P+ FT + +++ C L ++H Y+ S EA+
Sbjct: 108 SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAAC 167
Query: 160 KVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR-EIGKQQPDGFTLVGLISGLMD 218
+F I ++ V +I+G+++ G GL+++ M E + P T+ S +D
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID 227
Query: 219 FSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSAL 278
+ G+ IH +K GF N V ++++++Y R ++ A F + DL+ W+ L
Sbjct: 228 S--VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 279 ITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL 338
I+ L+ D +AL ++ G + SL+ A A + + G ++HG + R G
Sbjct: 286 ISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 339 ESNIIVSSALIDMYLKCGFVGLGILVF-ENMRNRNIVSYNSVISGLGLHGLAAQAFKLFE 397
N+ +++ALIDMY KCG + VF E + RN+VS+ S++ G G HG A+A +LF+
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 398 EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMA 457
+M+ G++PD +L AC HAGLV+ G + F M E+ I P + Y +V LLG A
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 458 GELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG-NTELAEIVSQQLFDNEPRKGAYKVML 516
G++ EAY V + D WGA+L C H N ++ + ++++ + +P+ VML
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVML 524
Query: 517 SNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
S IYA++G+W D R R + +G +K G+SWI
Sbjct: 525 SYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 336 HGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKL 395
H L +N+IVS Y + G V +F+ M +R++V++ ++I+G A+A++
Sbjct: 45 HILATNLIVS------YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWEC 98
Query: 396 FEEMLEKGLKPDESTLSGLLCAC 418
F EM+++G P+E TLS +L +C
Sbjct: 99 FHEMVKQGTSPNEFTLSSVLKSC 121
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 224/405 (55%), Gaps = 5/405 (1%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLF-NGMREIGKQQPDGF 207
Y K + +A KV + E+++V AMIS YS G + L +F MR GK P+ F
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK--PNEF 154
Query: 208 TLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL 267
T +++ + S LG+G+ IHGL +K +D + +VGS+L++MY++ + A +F L
Sbjct: 155 TFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECL 214
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGT 327
+ D+V+ +A+I G+ Q ++AL + L G + + ASLL A + L + G
Sbjct: 215 PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 328 EIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHG 387
+ H +VLR L ++ ++LIDMY KCG + +F+NM R +S+N+++ G HG
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 334
Query: 388 LAAQAFKLFEEML-EKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM-DEFCIPPRTE 445
L + +LF M EK +KPD TL +L C H + G IF M+ E+ P TE
Sbjct: 335 LGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTE 394
Query: 446 HYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDN 505
HY IV +LG AG ++EA+ F+ + +G+ G+LL C VH + ++ E V ++L +
Sbjct: 395 HYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEI 454
Query: 506 EPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
EP V+LSN+YAS GRW DV R ++ K PG SWI
Sbjct: 455 EPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWI 499
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 201/450 (44%), Gaps = 34/450 (7%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+++HA ++++ ++ T++L FY D L A + D+ P++++ W +MI +++
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
EAL+ +A+M+R++ KP+ FT+A ++ C L + +H
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG 191
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y+K + EA ++F + ERD+V C A+I+GY+ G + L++F+ + G
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG-M 250
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
P+ T L++ L +LL G+ H L+ A + ++L++MYS+ ++ A
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
+F + + ++W+A++ G+ + ++ L +R L K+ P + L V S
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFR-LMRDEKRVKPDAVTLLAVLSGC--- 366
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISG 382
HG + GL NI G++ E Y ++
Sbjct: 367 ------SHGRMEDTGL--NIFD----------------GMVAGEYGTKPGTEHYGCIVDM 402
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
LG G +AF+ + M KP L LL AC V G+ + RR+++ P
Sbjct: 403 LGRAGRIDEAFEFIKRMPS---KPTAGVLGSLLGACRVHLSVDIGESVGRRLIE--IEPE 457
Query: 443 RTEHYIHIVKLLGMAGELEEAYNFVLSLMQ 472
+Y+ + L AG + N +MQ
Sbjct: 458 NAGNYVILSNLYASAGRWADVNNVRAMMMQ 487
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 158/327 (48%), Gaps = 17/327 (5%)
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP 270
L++ +D L GQ +H +K+ + Y+ + L+ Y + C+ A V + +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
++V+W+A+I+ + Q +AL + + + K + A++L + + + + LG +IH
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 331 GYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAA 390
G +++ +S+I V S+L+DMY K G + +FE + R++VS ++I+G GL
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 391 QAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQE----IFRRMMDEFCIPPRTEH 446
+A ++F + +G+ P+ T + LL A L+ G++ + RR + + + +
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS-- 294
Query: 447 YIHIVKLLGMAGELEEAYNFVLSLMQPVDSGI-WGALLSCCDVHG-NTELAEIVSQQLFD 504
++ + G L A ++ P + I W A+L HG E+ E+ +L
Sbjct: 295 ---LIDMYSKCGNLSYARRLFDNM--PERTAISWNAMLVGYSKHGLGREVLELF--RLMR 347
Query: 505 NEPRKGAYKVMLSNIYA--SDGRWDDV 529
+E R V L + + S GR +D
Sbjct: 348 DEKRVKPDAVTLLAVLSGCSHGRMEDT 374
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/611 (27%), Positives = 271/611 (44%), Gaps = 79/611 (12%)
Query: 18 TRSRTKQLHALILRSHLSHES-FYATKILRFYALNDDLISAYNLFDKTPQ---RSIFLWN 73
T + +Q+HA +L S S A ++ YA L+ A N+F+ + LWN
Sbjct: 68 TAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWN 127
Query: 74 SMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXX 133
S+++A ++ AL Y M + D + ++R C R H
Sbjct: 128 SILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQI 187
Query: 134 XXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGY------------- 180
T Y K + +A +F + R+ + N MI G+
Sbjct: 188 GLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF 247
Query: 181 ----------------------SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMD 218
S CG + L+ F+ MR G G L S +
Sbjct: 248 EWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSG-NAVSGEALAVFFSVCAE 306
Query: 219 FSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSAL 278
L I + +HG +K GF+ +AL+++Y + + A +F + + +W++L
Sbjct: 307 LEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSL 366
Query: 279 ITGFLQCEDYKKALF---------------------------------------FYRNLS 299
IT F+ +AL ++R +
Sbjct: 367 ITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
+ A+ + I +L A+L + LG EIHG+V+R + NI+V +AL++MY KCG +
Sbjct: 427 FSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLS 486
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
G LVFE +R+++++S+NS+I G G+HG A +A +F+ M+ G PD L +L AC
Sbjct: 487 EGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACS 546
Query: 420 HAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIW 479
HAGLV+ G+EIF M F + P+ EHY IV LLG G L+EA V ++ +
Sbjct: 547 HAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVL 606
Query: 480 GALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNV 539
GALL+ C +H N ++AE ++ QL EP + ++LSNIY++ GRW++ R
Sbjct: 607 GALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKK 666
Query: 540 GARKMPGLSWI 550
+K+ G SWI
Sbjct: 667 DLKKVSGSSWI 677
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 250/512 (48%), Gaps = 5/512 (0%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K++HA++++ + + ++ Y A +F++ P+R I WNSMI +
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH-XXXXXXXXXXXXXX 141
+L + +ML+ KPD F+ + C + + +H
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
YSK+ VS A ++F+G+ +R++V N MI Y+ G F M E
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
QPD T + L+ S + G+ IHG ++ GF + + +AL++MY + SA
Sbjct: 330 LQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAE 385
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLT 321
+F + + ++++W+++I ++Q AL ++ L + D IAS+L A A+
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESL 445
Query: 322 DVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVIS 381
+ G EIH Y+++ SN I+ ++L+ MY CG + F ++ +++VS+NS+I
Sbjct: 446 SLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIM 505
Query: 382 GLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
+HG + LF EM+ + P++ST + LL AC +G+V +G E F M E+ I
Sbjct: 506 AYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGID 565
Query: 442 PRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQ 501
P EHY ++ L+G G A F+ + + IWG+LL+ H + +AE ++Q
Sbjct: 566 PGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQ 625
Query: 502 LFDNEPRKGAYKVMLSNIYASDGRWDDVKRTR 533
+F E V+L N+YA GRW+DV R +
Sbjct: 626 IFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 657
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 240/485 (49%), Gaps = 21/485 (4%)
Query: 42 TKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETK 101
T+ LR +A + + A LFD+ + FLWN MI+ F + EA+ FY++M+ K
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 102 PDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKV 161
D FTY +I+ L+ + +H + Y K +A KV
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 162 FSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSL 221
F + ERD+V N+MISGY G L LF M + G +PD F+ + +
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYS 246
Query: 222 LGIGQGIHGLCLKSGFDC-NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALIT 280
+G+ IH ++S + + V +++++MYS++ ++ A +F G+ Q ++VAW+ +I
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 306
Query: 281 GFLQCEDYKKALFFYRNLSVA-GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLE 339
+ + A ++ +S G + D I +LL ASA L G IHGY +R G
Sbjct: 307 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFL 362
Query: 340 SNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEM 399
++++ +ALIDMY +CG + ++F+ M +N++S+NS+I+ +G A +LF+E+
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 400 LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR----TEHYIHIVKLLG 455
+ L PD +T++ +L A + + +G+EI + + R T +V +
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREI-----HAYIVKSRYWSNTIILNSLVHMYA 477
Query: 456 MAGELEEAYN-FVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNE--PRKGAY 512
M G+LE+A F L++ V S W +++ VHG ++ + ++ + P K +
Sbjct: 478 MCGDLEDARKCFNHILLKDVVS--WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Query: 513 KVMLS 517
+L+
Sbjct: 536 ASLLA 540
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 158/554 (28%), Positives = 260/554 (46%), Gaps = 35/554 (6%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
QLHA L+S + + T L YA D++ A LFD + + +N+MI +++
Sbjct: 260 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEE 319
Query: 84 KFDEALSFYAKMLRTETKPDN------FTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
+AL + +++ + D F L++G E + GL I
Sbjct: 320 HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI------KSSLSL 373
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
Y K ++EA +VF + RD V NA+I+ + G + L LF M
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 433
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
+ +PD FT ++ SL G G IH +KSG N+ VG +L++MYS+ +
Sbjct: 434 R-SRIEPDEFTFGSILKACTGGSL-GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 491
Query: 258 NSAYGVFIGLYQPD--------------------LVAWSALITGFLQCEDYKKALFFYRN 297
A + +Q V+W+++I+G++ E + A +
Sbjct: 492 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 551
Query: 298 LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGF 357
+ G D A++L A L LG +IH V++ L+S++ + S L+DMY KCG
Sbjct: 552 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 611
Query: 358 VGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCA 417
+ L+FE R+ V++N++I G HG +A +LFE M+ + +KP+ T +L A
Sbjct: 612 LHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 671
Query: 418 CCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG 477
C H GL+ G E F M ++ + P+ HY ++V +LG +G+++ A + + D
Sbjct: 672 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 731
Query: 478 IWGALLSCCDVH-GNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNI 536
IW LL C +H N E+AE + L +P+ + +LSN+YA G W+ V R N+
Sbjct: 732 IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM 791
Query: 537 VNVGARKMPGLSWI 550
+K PG SW+
Sbjct: 792 RGFKLKKEPGCSWV 805
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 198/448 (44%), Gaps = 46/448 (10%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQ HA ++ S +F +L+ Y + D +SA +FDK P R + WN MI ++K+
Sbjct: 26 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 85
Query: 83 HKFDEALSFY-------------------------------AKMLRTETKPDNFTYACLI 111
+ +A SF+ M R + D T+A ++
Sbjct: 86 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 145
Query: 112 RGCH--ENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERD 169
+ C E+ L G++I H Y+K E+ +VF GI E++
Sbjct: 146 KVCSFLEDTSL-GMQI-HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 203
Query: 170 LVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIH 229
V +A+I+G L+ F M+++ ++ S L +G +H
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAALSELRLGGQLH 262
Query: 230 GLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYK 289
LKS F + V +A ++MY++ M A +F + +++A+ITG+ Q E
Sbjct: 263 AHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF 322
Query: 290 KALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALI 349
KAL + L +G D I ++ + A A + + G +I+G ++ L ++ V++A I
Sbjct: 323 KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAI 382
Query: 350 DMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDES 409
DMY KC + VF+ MR R+ VS+N++I+ +G + LF ML ++PDE
Sbjct: 383 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEF 442
Query: 410 TLSGLLCACC----------HAGLVKDG 427
T +L AC H+ +VK G
Sbjct: 443 TFGSILKACTGGSLGYGMEIHSSIVKSG 470
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 180/350 (51%), Gaps = 19/350 (5%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFT 208
YSK + + +A+ F+ + RD+V N+M+SGY G K +++F M G + DG T
Sbjct: 82 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE-FDGRT 140
Query: 209 ---LVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFI 265
++ + S L D SL G IHG+ ++ G D + SAL++MY++ K + VF
Sbjct: 141 FAIILKVCSFLEDTSL---GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 197
Query: 266 GLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRL 325
G+ + + V+WSA+I G +Q AL F++ + + AS+L + A L+++RL
Sbjct: 198 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 257
Query: 326 GTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGL 385
G ++H + L+ ++ IV +A +DMY KC + ++F+N N N SYN++I+G
Sbjct: 258 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 317
Query: 386 HGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD-----EFCI 440
+A LF ++ GL DE +LSG+ AC + +G +I+ + + C+
Sbjct: 318 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 377
Query: 441 PPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
+ + G L EA+ V M+ D+ W A+++ + +G
Sbjct: 378 ANAA------IDMYGKCQALAEAFR-VFDEMRRRDAVSWNAIIAAHEQNG 420
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITG 281
L +G+ H + SGF +V + L+ +Y+ + SA VF + D+V+W+ +I G
Sbjct: 22 LELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING 81
Query: 282 FLQCEDYKKALFFYRNLSV-------------------------------AGKKADPILI 310
+ + D KA F+ + V G + D
Sbjct: 82 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 141
Query: 311 ASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN 370
A +L + L D LG +IHG V+R G +++++ +SAL+DMY K + VF+ +
Sbjct: 142 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 201
Query: 371 RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
+N VS++++I+G + L + A K F+EM + +S + +L +C
Sbjct: 202 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 249
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQ+HA +++ L + + + ++ Y+ DL + +F+K+ +R WN+MI +A
Sbjct: 581 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 640
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGC 114
K +EA+ + +M+ KP++ T+ ++R C
Sbjct: 641 GKGEEAIQLFERMILENIKPNHVTFISILRAC 672
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 155/551 (28%), Positives = 271/551 (49%), Gaps = 18/551 (3%)
Query: 11 ELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIF 70
+L+ S S KQ H +++ + + F K+L+ Y + A LFD+ P R+I
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 71 LWNSMIRAFAKA-----HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI 125
WN +I + H+ + +++L T+ D+ ++ LIR C ++ ++
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGF 185
LH Y K + EA +VF + +RDLVL NA++S Y G
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 186 WGKGLQLFNGM-REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
+ L M + + + D FT L+S + G+ IH + K + + V
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVA 279
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
+AL+NMY++ ++ A F + ++V+W+A+I GF Q + ++A+ + + + +
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILV 364
D + AS+L + A+ + + ++ V + G + V+++LI Y + G + +L
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 365 FENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV 424
F ++R ++VS+ SVI L HG A ++ ++FE ML+K L+PD+ T +L AC H GLV
Sbjct: 400 FHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLV 458
Query: 425 KDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLS 484
++G F+RM + + I EHY ++ LLG AG ++EA + + S+ + A
Sbjct: 459 QEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTG 518
Query: 485 CCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDV----KRTRDNIVNVG 540
C++H E + +++L + EP K +LSN Y S+G W+ KR R N N
Sbjct: 519 GCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNP- 577
Query: 541 ARKMPGLSWIG 551
K PG SW+G
Sbjct: 578 --KTPGCSWLG 586
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 248/502 (49%), Gaps = 16/502 (3%)
Query: 57 AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE 116
A LF + PQ ++ WN +I F AL F +M R D F C ++ C
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 117 NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSG---IFERDLVLC 173
L + LH YS + A+ VF + +
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 174 NAMISGY-----SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
N+M+SG+ + W LQ++ D +TL G + +++ L +G +
Sbjct: 311 NSMLSGFLINEENEAALWLL-LQIYQS-----DLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDY 288
H L + SG++ + VGS LV++++ + A+ +F L D++A+S LI G ++
Sbjct: 365 HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFN 424
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
A + +R L G AD +++++L + L + G +IHG ++ G ES + ++AL
Sbjct: 425 SLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATAL 484
Query: 349 IDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
+DMY+KCG + G+++F+ M R++VS+ +I G G +G +AF+ F +M+ G++P++
Sbjct: 485 VDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNK 544
Query: 409 STLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVL 468
T GLL AC H+GL+++ + M E+ + P EHY +V LLG AG +EA +
Sbjct: 545 VTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELIN 604
Query: 469 SLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDD 528
+ D IW +LL+ C H N L +++++L P + LSN YA+ G WD
Sbjct: 605 KMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQ 664
Query: 529 VKRTRDNIVNVGARKMPGLSWI 550
+ + R+ +GA++ G+SWI
Sbjct: 665 LSKVREAAKKLGAKE-SGMSWI 685
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 197/450 (43%), Gaps = 39/450 (8%)
Query: 17 QTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMI 76
Q R + + A +++ +S F A ++ Y L A+ +FD+ +R+I W +M+
Sbjct: 19 QAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMV 78
Query: 77 RAFAKAHKFDEALSFYAKMLRTETKPDN-FTYACLIRGCHENFDLDGLRILHXXXXXXXX 135
+ K ++A+ Y +ML +E + N F Y+ +++ C D+ +++
Sbjct: 79 SGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENL 138
Query: 136 XXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNG 195
Y K + EA+ F I N +ISGY G + + LF+
Sbjct: 139 RGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHR 198
Query: 196 MRE-------------IGKQQP----------------DGFTLVGLISGLMDFSLLGIGQ 226
M + + K P DGF L + LL +G+
Sbjct: 199 MPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGK 258
Query: 227 GIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL------VAWSALIT 280
+H +KSG + + + SAL++MYS + A VF +Q L W+++++
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF---HQEKLAVNSSVAVWNSMLS 315
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLES 340
GFL E+ + AL+ + + D ++ L ++RLG ++H V+ G E
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 341 NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML 400
+ IV S L+D++ G + +F + N++I++++ +I G G + AF LF E++
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 401 EKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+ GL D+ +S +L C + G++I
Sbjct: 436 KLGLDADQFIVSNILKVCSSLASLGWGKQI 465
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 112/228 (49%), Gaps = 20/228 (8%)
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
G+ I +K G N ++ + +++MY F+ ++ A+ VF + + ++V W+ +++G+
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 285 CEDYKKALFFYRN-LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
KA+ YR L + A+ + +++L A + D++LG ++ + + L +++
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
+ ++++DMY+K G + F+ + + S+N++ISG GL +A LF M
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM---- 199
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQ----EIFRRM------MDEFCIP 441
P + +S C +G V G E RM +D F +P
Sbjct: 200 --PQPNVVS---WNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALP 242
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 306 DPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF 365
D LIA+ L ++ + G I +V++ G+ N+ +++ +I MY+ + VF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 366 ENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLK-PDESTLSGLLCACCHAGLV 424
+ M RNIV++ +++SG G +A +L+ ML+ + +E S +L AC G +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 425 KDGQEIFRRMMDEFCIPPRTEHYI--HIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGAL 482
+ G ++ R+ E R + + +V + G L EA + +++P S W L
Sbjct: 124 QLGILVYERIGKE---NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRP-SSTSWNTL 179
Query: 483 LS 484
+S
Sbjct: 180 IS 181
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 126/312 (40%), Gaps = 16/312 (5%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
Q+H+L++ S + + ++ +A ++ A+ LF + P + I ++ +IR K+
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
A + ++++ D F + +++ C L + +H
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT 482
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
Y K + +F G+ ERD+V +I G+ G + + F+ M IG +
Sbjct: 483 ALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGI-E 541
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGS--ALVNMYSRFKCMNSAY 261
P+ T +GL+S LL + +KS + Y+ +V++ + A
Sbjct: 542 PNKVTFLGLLSACRHSGLLEEARSTLE-TMKSEYGLEPYLEHYYCVVDLLGQAGLFQEAN 600
Query: 262 GVFIGL-YQPDLVAWSALITGFLQCEDYKKA--LFFYRNLSVAGKKADPILIASLLVASA 318
+ + +PD W++L+T C +K A + + G DP + SL A A
Sbjct: 601 ELINKMPLEPDKTIWTSLLTA---CGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYA 657
Query: 319 ------QLTDVR 324
QL+ VR
Sbjct: 658 TLGMWDQLSKVR 669
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQ+H L ++ E AT ++ Y ++ + LFD +R + W +I F +
Sbjct: 463 KQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQN 522
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
+ +EA ++ KM+ +P+ T+ L+ C + L+ R
Sbjct: 523 GRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEAR 564
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 223/400 (55%), Gaps = 5/400 (1%)
Query: 153 SHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ--PDGFTLV 210
S +S A +F + E D+V+ N+M GYS + L++F+ EI + PD +T
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSR---FTNPLEVFSLFVEILEDGILPDNYTFP 133
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP 270
L+ L G+ +H L +K G D N YV L+NMY+ + ++SA VF + +P
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP 193
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
+V ++A+ITG+ + +AL +R + K + I + S+L + A L + LG IH
Sbjct: 194 CVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253
Query: 331 GYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAA 390
Y +H + V++ALIDM+ KCG + + +FE MR ++ +++++I HG A
Sbjct: 254 KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 313
Query: 391 QAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHI 450
++ +FE M + ++PDE T GLL AC H G V++G++ F +M+ +F I P +HY +
Sbjct: 314 KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSM 373
Query: 451 VKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKG 510
V LL AG LE+AY F+ L +W LL+ C H N +LAE VS+++F+ + G
Sbjct: 374 VDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHG 433
Query: 511 AYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V+LSN+YA + +W+ V R + + A K+PG S I
Sbjct: 434 GDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSI 473
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 8/338 (2%)
Query: 24 QLHALILRSHLSHESFYATKILRF---YALNDDLISAYNLFDKTPQRSIFLWNSMIRAFA 80
Q+ A ++SH+ SF A K++ F + A +LF+ + I ++NSM R ++
Sbjct: 47 QIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 81 KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
+ E S + ++L PDN+T+ L++ C L+ R LH
Sbjct: 106 RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVY 165
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y++ V A VF I E +V NAMI+GY+ + L LF M+ G
Sbjct: 166 VCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ--G 223
Query: 201 KQ-QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
K +P+ TL+ ++S L +G+ IH K F V +AL++M+++ ++
Sbjct: 224 KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDD 283
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
A +F + D AWSA+I + +K++ + + + D I LL A +
Sbjct: 284 AVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSH 343
Query: 320 LTDVRLGTE-IHGYVLRHGLESNIIVSSALIDMYLKCG 356
V G + V + G+ +I +++D+ + G
Sbjct: 344 TGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 1/193 (0%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+QLH L ++ L + ++ Y +D+ SA +FD+ + + +N+MI +A+
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
++ +EALS + +M KP+ T ++ C LD + +H
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
++K + +A +F + +D +AMI Y+ G K + +F MR
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS-ENV 327
Query: 203 QPDGFTLVGLISG 215
QPD T +GL++
Sbjct: 328 QPDEITFLGLLNA 340
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 154/575 (26%), Positives = 269/575 (46%), Gaps = 55/575 (9%)
Query: 15 SHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNS 74
+H + LH IL+ +LS SF+A+ + RF S F+ +
Sbjct: 2 NHSNARKLTTLHGFILKRNLS--SFHAS-LKRF--------SDKKFFNPNHEDG----GV 46
Query: 75 MIRAFAKAHKFDEALSFYA--KMLRTET-------KPDNFTYACLIRGCHENFDLDGLRI 125
++ +A++F EA+ K+LR KP TY LI+ C + L+ +
Sbjct: 47 VVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKK 106
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGF 185
+H Y+K + +A KVF + RDL N M++GY+ G
Sbjct: 107 VHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGL 166
Query: 186 WGKGLQLFNGMRE-------------IGKQQPDG------------------FTLVGLIS 214
+ +LF+ M E + K QP+ FT+ ++
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVA 226
Query: 215 GLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVA 274
+ G+ IHG +++G D + + S+L++MY + C++ A +F + + D+V+
Sbjct: 227 AAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVS 286
Query: 275 WSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVL 334
W+++I + + +++ + L + ++ + A +L A A LT LG ++HGY+
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT 346
Query: 335 RHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFK 394
R G + SS+L+DMY KCG + V + ++VS+ S+I G +G +A K
Sbjct: 347 RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALK 406
Query: 395 LFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLL 454
F+ +L+ G KPD T +L AC HAGLV+ G E F + ++ + ++HY +V LL
Sbjct: 407 YFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLL 466
Query: 455 GMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKV 514
+G E+ + + + +W ++L C +GN +LAE +Q+LF EP V
Sbjct: 467 ARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYV 526
Query: 515 MLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSW 549
++NIYA+ G+W++ + R + +G K PG SW
Sbjct: 527 TMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSW 561
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/552 (28%), Positives = 263/552 (47%), Gaps = 7/552 (1%)
Query: 2 SVKFSSLLQELTK-SHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNL 60
S S+LL L HQ R +H L+++ +LR YA + A +
Sbjct: 261 STTVSTLLSVLGHVDHQKWGRG--IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 61 FDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDL 120
F + P + + WNS++ +F + +AL M+ + + T+ + C
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378
Query: 121 DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGY 180
+ RILH + Y K +SE+ +V + RD+V NA+I GY
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438
Query: 181 SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISG-LMDFSLLGIGQGIHGLCLKSGFDC 239
+ K L F MR G + T+V ++S L+ LL G+ +H + +GF+
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSS-NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 240 NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
+ +V ++L+ MY++ ++S+ +F GL +++ W+A++ ++ L +
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
G D + L A+A+L + G ++HG ++ G E + + +A DMY KCG +G
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
+ + NR++ S+N +IS LG HG + F EMLE G+KP T LL AC
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 677
Query: 420 HAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL-MQPVDSGI 478
H GLV G + + +F + P EH I ++ LLG +G L EA F+ + M+P D +
Sbjct: 678 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL-V 736
Query: 479 WGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVN 538
W +LL+ C +HGN + ++ L EP + V+ SN++A+ GRW+DV+ R +
Sbjct: 737 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 796
Query: 539 VGARKMPGLSWI 550
+K SW+
Sbjct: 797 KNIKKKQACSWV 808
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 188/430 (43%), Gaps = 2/430 (0%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
S +SL+ +S Q+H + +S L + + +T IL Y + + + +F
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 62 DKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLD 121
++ P R++ W S++ ++ + +E + Y M + + + +I C D
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 122 GLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYS 181
R + + +V A+ +F + ERD + N++ + Y+
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 182 YCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNA 241
G + ++F+ MR + + T+ L+S L G+GIHGL +K GFD
Sbjct: 238 QNGHIEESFRIFSLMRRF-HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 242 YVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVA 301
V + L+ MY+ A VF + DL++W++L+ F+ AL ++ +
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLG 361
GK + + S L A G +HG V+ GL N I+ +AL+ MY K G +
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416
Query: 362 ILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHA 421
V M R++V++N++I G +A F+ M +G+ + T+ +L AC
Sbjct: 417 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 476
Query: 422 G-LVKDGQEI 430
G L++ G+ +
Sbjct: 477 GDLLERGKPL 486
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 144/283 (50%), Gaps = 2/283 (0%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFT 208
Y+KF V A +F + R+ V N M+SG G + +G++ F M ++G + P F
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIK-PSSFV 60
Query: 209 LVGLISGL-MDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL 267
+ L++ S+ G +HG KSG + YV +A++++Y + ++ + VF +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGT 327
++V+W++L+ G+ + ++ + Y+ + G + ++ ++ + L D LG
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 328 EIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHG 387
+I G V++ GLES + V ++LI M G V +F+ M R+ +S+NS+ + +G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 388 LAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
++F++F M + + +T+S LL H K G+ I
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI 283
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 193/436 (44%), Gaps = 20/436 (4%)
Query: 57 AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE 116
A +LFD P R+ WN+M+ + + E + F+ KM KP +F A L+ C
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 117 NFDL--DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCN 174
+ + +G+++ H Y + VS + KVF + +R++V
Sbjct: 71 SGSMFREGVQV-HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 129
Query: 175 AMISGYSYCGFWGKGLQLFNGMREIGKQ-QPDGFTLVGLISGLM-DFSLLGIGQGIHGLC 232
+++ GYS G + + ++ GMR G + +LV GL+ D SL G+ I G
Sbjct: 130 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL---GRQIIGQV 186
Query: 233 LKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL 292
+KSG + V ++L++M ++ A +F + + D ++W+++ + Q +++
Sbjct: 187 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 246
Query: 293 FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMY 352
+ + + + +++LL + + G IHG V++ G +S + V + L+ MY
Sbjct: 247 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 306
Query: 353 LKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
G LVF+ M ++++S+NS+++ G + A L M+ G + T +
Sbjct: 307 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 366
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHI-----VKLLGMAGELEEAYNFV 467
L AC + G R++ + Y I V + G GE+ E+ +
Sbjct: 367 SALAACFTPDFFEKG-----RILHGLVVVSGL-FYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 468 LSLMQPVDSGIWGALL 483
L M D W AL+
Sbjct: 421 LQ-MPRRDVVAWNALI 435
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 134/248 (54%), Gaps = 9/248 (3%)
Query: 250 MYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPIL 309
MY++F + A +F + + V+W+ +++G ++ Y + + F+R + G K +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 310 IASLLVASAQLTDV-RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENM 368
IASL+ A + + R G ++HG+V + GL S++ VS+A++ +Y G V VFE M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 369 RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKD-- 426
+RN+VS+ S++ G G + +++ M +G+ +E+++S ++ +C GL+KD
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDES 177
Query: 427 -GQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSC 485
G++I +++ + + ++ +LG G ++ A N++ M D+ W ++ +
Sbjct: 178 LGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYA-NYIFDQMSERDTISWNSIAAA 235
Query: 486 CDVHGNTE 493
+G+ E
Sbjct: 236 YAQNGHIE 243
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/566 (29%), Positives = 268/566 (47%), Gaps = 44/566 (7%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
LHA ++++ + F AT ++ Y + A + D+ P+R I N+ + +
Sbjct: 53 LHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGF 112
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
+A + + + ++ T A ++ GC D++G LH
Sbjct: 113 CRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYVGTS 169
Query: 145 XXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
+ YS+ A+++F + + +V NA ISG G +FN MR+ ++P
Sbjct: 170 LVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEP 229
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF 264
+ T V I+ L G+ +HGL +K F VG+AL++MYS+ +C SAY VF
Sbjct: 230 NDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVF 289
Query: 265 IGL------------------------------------YQPDLVAWSALITGFLQCEDY 288
L +PD W++LI+GF Q
Sbjct: 290 TELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKV 349
Query: 289 KKAL-FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSA 347
+A FF R LSV + L SLL A + + ++ G EIHG+V++ E +I V ++
Sbjct: 350 IEAFKFFERMLSVVMVPSLKCL-TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS 408
Query: 348 LIDMYLKCGFVGLGILVFENM--RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLK 405
LIDMY+KCG +F+ + ++ V +N +ISG G HG A ++FE + E+ ++
Sbjct: 409 LIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE 468
Query: 406 PDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYN 465
P +T + +L AC H G V+ G +IFR M +E+ P TEH ++ LLG +G L EA
Sbjct: 469 PSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKE 528
Query: 466 FVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGR 525
V+ M S ++ +LL C H + L E + +L + EP A V+LS+IYA+ R
Sbjct: 529 -VIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALER 587
Query: 526 WDDVKRTRDNIVNVGARKMPGLSWIG 551
W+DV+ R I K+PGLS G
Sbjct: 588 WEDVESIRQVIDQKQLVKLPGLSLSG 613
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 172/344 (50%), Gaps = 10/344 (2%)
Query: 102 PDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKV 161
P+ FT+ L++ C + D+ RILH + Y K V++A KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 162 FSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSL 221
+ ER + NA +SG GF ++F R G + T+ ++ G D
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGM-NSVTVASVLGGCGDIEG 147
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITG 281
G +H L +KSGF+ YVG++LV+MYSR A +F + +V ++A I+G
Sbjct: 148 ---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 282 FLQ--CEDYKKALF-FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL 338
++ + ++F R S ++ + + + + A A L +++ G ++HG V++
Sbjct: 205 LMENGVMNLVPSVFNLMRKFS--SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 339 ESNIIVSSALIDMYLKCGFVGLGILVFENMRN-RNIVSYNSVISGLGLHGLAAQAFKLFE 397
+ +V +ALIDMY KC +VF +++ RN++S+NSVISG+ ++G A +LFE
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 398 EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
++ +GLKPD +T + L+ G V + + F RM+ +P
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVP 366
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 48/349 (13%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
QLH L ++S E + T ++ Y+ + + A +F+K P +S+ +N+ I +
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 84 KFDEALSFYAKMLR-TETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ S + M + + +P++ T+ I C +L R LH
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFE-RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
YSK A VF+ + + R+L+ N++ISG G ++LF + G
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG- 328
Query: 202 QQPDGFTLVGLISGL-----------------------------------MDFSLLGIGQ 226
+PD T LISG D L G+
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGK 388
Query: 227 GIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFI-GLYQP---DLVAWSALITGF 282
IHG +K+ + + +V ++L++MY KC S++ I ++P D V W+ +I+G+
Sbjct: 389 EIHGHVIKAAAERDIFVLTSLIDMY--MKCGLSSWARRIFDRFEPKPKDPVFWNVMISGY 446
Query: 283 LQCEDYKKALFFYRNLSVAGKKADPIL--IASLLVASAQLTDVRLGTEI 329
+ + + A+ + L +K +P L ++L A + +V G++I
Sbjct: 447 GKHGECESAIEIFELLR--EEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 295 YR--NLSVAGKKADPILIAS--------LLVASAQLTDVRLGTEIHGYVLRHGLESNIIV 344
YR NL G D IL S LL + A+L DV G +H V++ G ++
Sbjct: 9 YRVSNLVTGGTSLDVILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFT 68
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
++AL+ MY+K V + V + M R I S N+ +SGL +G AF++F + G
Sbjct: 69 ATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGS 128
Query: 405 KPDESTLSGLLCAC 418
+ T++ +L C
Sbjct: 129 GMNSVTVASVLGGC 142
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/589 (27%), Positives = 288/589 (48%), Gaps = 50/589 (8%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHE--SF------YATKILRFYALNDD 53
S +++L++L+ ++ + KQLHA ILR+ ++H+ SF ++ I YALN
Sbjct: 9 STAANTILEKLSFC-KSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALN-- 65
Query: 54 LISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG 113
++ P+ +F N +R +++ + + FY ++ + D F++ +++
Sbjct: 66 ---VFSSIPSPPESIVF--NPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKA 120
Query: 114 CHENFDL-DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVL 172
+ L +G+ LH Y+ ++ A VF + RD+V
Sbjct: 121 VSKVSALFEGME-LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVT 179
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLC 232
N MI Y G + +LF M++ PD L ++S + + I+
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKD-SNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 238
Query: 233 LKSGFDCNAYVGSALVNMYSRFKCMN-------------------------------SAY 261
+++ + ++ +ALV MY+ CM+ A
Sbjct: 239 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQ 298
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLT 321
+F + DLV W+ +I+ +++ + ++AL + + +G K D + + S++ A A L
Sbjct: 299 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG 358
Query: 322 DVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVIS 381
+ +H + +GLES + +++ALI+MY KCG + VFE M RN+VS++S+I+
Sbjct: 359 ILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMIN 418
Query: 382 GLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
L +HG A+ A LF M ++ ++P+E T G+L C H+GLV++G++IF M DE+ I
Sbjct: 419 ALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 478
Query: 442 PRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQ 501
P+ EHY +V L G A L EA + S+ + IWG+L+S C +HG EL + +++
Sbjct: 479 PKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKR 538
Query: 502 LFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ + EP V++SNIYA + RW+DV+ R + K GLS I
Sbjct: 539 ILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 252/511 (49%), Gaps = 15/511 (2%)
Query: 41 ATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTET 100
AT ++ Y+ +L A LF R + W++MI ++ +A + DEA+S + M+R
Sbjct: 338 ATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHI 397
Query: 101 KPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASK 160
KP+ T +++GC + +H + Y+K S A K
Sbjct: 398 KPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALK 457
Query: 161 VFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFS 220
F + +D V NA+ GY+ G K ++ M+ G PD T+VG++ S
Sbjct: 458 AFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG-VCPDSRTMVGMLQTCAFCS 516
Query: 221 LLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALI 279
G ++G +K GFD +V AL+NM+++ + +A +F ++ V+W+ ++
Sbjct: 517 DYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Query: 280 TGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLE 339
G+L ++A+ +R + V + + + +++ A+A+L+ +R+G +H +++ G
Sbjct: 577 NGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFC 636
Query: 340 SNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEM 399
S V ++L+DMY KCG + F + N+ IVS+N+++S HGLA+ A LF M
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Query: 400 LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGE 459
E LKPD + +L AC HAGLV++G+ IF M + I EHY +V LLG AG
Sbjct: 697 QENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGL 756
Query: 460 LEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNI 519
EA + + G+WGALL+ +H N L+ QL EP ++
Sbjct: 757 FGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH------- 809
Query: 520 YASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
Y+ D R +V +N+ + +K+P SWI
Sbjct: 810 YSQDRRLGEV----NNVSRI--KKVPACSWI 834
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 181/395 (45%), Gaps = 3/395 (0%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
++H LI L + + T ++ Y DL+SA +FDK + + WN+M+ A+
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
AL + M D+ + LI + D R LH
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGL 240
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
Y + + A VF ++ +D M++ Y++ GF+ + L+LF+ MR +
Sbjct: 241 IDM--YCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 298
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
L + L+ G IH ++ G + V ++L++MYS+ + A +
Sbjct: 299 NKVAAASALQAAAYVGDLVK-GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 264 FIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
FI + D+V+WSA+I + Q + +A+ +R++ K + + + S+L A +
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS 417
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
RLG IH Y ++ +ES + ++A+I MY KCG + FE + ++ V++N++ G
Sbjct: 418 RLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGY 477
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
G A +AF +++ M G+ PD T+ G+L C
Sbjct: 478 TQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 186/392 (47%), Gaps = 16/392 (4%)
Query: 51 NDDLISAYNLFDKTP-QRSIF---------LWNSMIRAFAKAHKFDEALSFYAKMLRTE- 99
++ LI+AY+LF + R IF LWNSMIR + +A EAL F+ M +
Sbjct: 36 HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKG 95
Query: 100 TKPDNFTYACLIRGCHENFDLD-GLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA 158
PD +++ ++ C + D GLRI H Y K + A
Sbjct: 96 IDPDKYSFTFALKACAGSMDFKKGLRI-HDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 159 SKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMD 218
+VF + +D+V N M+SG + G L LF+ MR D +L LI +
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCC-VDIDHVSLYNLIPAVSK 213
Query: 219 FSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSAL 278
+ + +HGL +K GF S L++MY + +A VF +++ D +W +
Sbjct: 214 LEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTM 271
Query: 279 ITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL 338
+ + +++ L + + + + + AS L A+A + D+ G IH Y ++ GL
Sbjct: 272 MAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGL 331
Query: 339 ESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEE 398
++ V+++L+ MY KCG + + +F N+ +R++VS++++I+ G +A LF +
Sbjct: 332 IGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRD 391
Query: 399 MLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
M+ +KP+ TL+ +L C + G+ I
Sbjct: 392 MMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI 423
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 266/541 (49%), Gaps = 27/541 (4%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT--PQRSIFLWNSMIRAFA 80
KQ+H+L++++ S ++ Y ++ A +F++T R +N +I A
Sbjct: 209 KQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA 268
Query: 81 KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGC------HENFDLDGLRILHXXXXXXX 134
K DE+L + KML +P + T+ ++ C H+ +H
Sbjct: 269 -GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQ---------VHGLAIKTG 318
Query: 135 XXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFN 194
T YS F A KVF + E+DLV N MIS Y+ + ++
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 195 GMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF 254
M IG +PD FT L++ +D +L + + +K G + +AL++ YS+
Sbjct: 379 RMHIIG-VKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSKN 434
Query: 255 KCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK--ADPILIAS 312
+ A +F + +L++W+A+I+GF + L + L + + D +++
Sbjct: 435 GQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLST 494
Query: 313 LLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRN 372
LL + + LG++ H YVLRHG ++ +ALI+MY +CG + + VF M ++
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKD 554
Query: 373 IVSYNSVISGLGLHGLAAQAFKLFEEMLEKG-LKPDESTLSGLLCACCHAGLVKDGQEIF 431
+VS+NS+IS HG A ++ M ++G + PD +T S +L AC HAGLV++G EIF
Sbjct: 555 VVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIF 614
Query: 432 RRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDS--GIWGALLSCCDVH 489
M++ + +H+ +V LLG AG L+EA + V + + S +W AL S C H
Sbjct: 615 NSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAH 674
Query: 490 GNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSW 549
G+ +L ++V++ L + E + V LSNIYA G W + + TR I +GA K G SW
Sbjct: 675 GDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSW 734
Query: 550 I 550
+
Sbjct: 735 M 735
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 218/485 (44%), Gaps = 43/485 (8%)
Query: 53 DLISAYNLFDKTPQRS-IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLI 111
D+ A+ +FDK P+R + +WN+MI ++ + ++ + +M + + D F +A ++
Sbjct: 138 DIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 112 RGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVF--SGIFERD 169
C + LD + +H T Y V +A VF + + RD
Sbjct: 198 SMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 170 LVLCNAMISGYSYCGF-WGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
V N +I G + GF + L +F M E +P T V ++ S +G +
Sbjct: 257 QVTFNVVIDGLA--GFKRDESLLVFRKMLE-ASLRPTDLTFVSVMGSC---SCAAMGHQV 310
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDY 288
HGL +K+G++ V +A + MYS F+ +A+ VF L + DLV W+ +I+ + Q +
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
K A+ Y+ + + G K D SLL S L + + + +++ GL S I +S+AL
Sbjct: 371 KSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNAL 427
Query: 349 IDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLK--P 406
I Y K G + L+FE +N++S+N++ISG +G + + F +LE ++ P
Sbjct: 428 ISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILP 487
Query: 407 DESTLSGLLCAC-----------CHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLG 455
D TLS LL C HA +++ GQ E I ++ +
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQ------FKETLIGNA------LINMYS 535
Query: 456 MAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNE---PRKGAY 512
G ++ + V + M D W +L+S HG E A + + D P +
Sbjct: 536 QCGTIQNSLE-VFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATF 594
Query: 513 KVMLS 517
+LS
Sbjct: 595 SAVLS 599
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 164/342 (47%), Gaps = 16/342 (4%)
Query: 147 TAYSKFSHVSEASKVFSGIFERD-LVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPD 205
+A K + A +VF + ERD + + NAMI+G G+ ++LF M ++G + D
Sbjct: 131 SASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRH-D 189
Query: 206 GFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF- 264
F ++S + D+ L G+ +H L +K+GF + V +AL+ MY + + A VF
Sbjct: 190 KFGFATILS-MCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE 248
Query: 265 -IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
+ D V ++ +I G + + L F + L + + D ++ + S
Sbjct: 249 ETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSC----A 304
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
+G ++HG ++ G E +VS+A + MY G VFE++ +++V++N++IS
Sbjct: 305 AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSY 364
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
L A +++ M G+KPDE T LL L D E+ + + +F + +
Sbjct: 365 NQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLSSK 420
Query: 444 TEHYIHIVKLLGMAGELEEA-YNFVLSLMQPVDSGIWGALLS 484
E ++ G++E+A F SL + + S W A++S
Sbjct: 421 IEISNALISAYSKNGQIEKADLLFERSLRKNLIS--WNAIIS 460
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 159 SKVFSGIFERDLVLCN--AMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGL 216
++ S I E L N ++G + G L+LF + +PD +++ I+
Sbjct: 8 TESLSAIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTA 67
Query: 217 MDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWS 276
G +H ++SG C+++V + L+++Y R + S F + +PD+ +W+
Sbjct: 68 RHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWT 127
Query: 277 --------------------------------ALITGFLQCEDYKKALFFYRNLSVAGKK 304
A+ITG + ++ ++ +R + G +
Sbjct: 128 TLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVR 187
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILV 364
D A++L + + G ++H V++ G V +ALI MY C V LV
Sbjct: 188 HDKFGFATIL-SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLV 246
Query: 365 FE--NMRNRNIVSYNSVISGLGLHGLAA-QAFKLFEEMLEKGLKPDESTLSGLLCACCHA 421
FE ++ R+ V++N VI GL G ++ +F +MLE L+P + T ++ +C A
Sbjct: 247 FEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCA 304
Query: 422 GL 423
+
Sbjct: 305 AM 306
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 262/533 (49%), Gaps = 8/533 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K +H+ + S + + + T ++ FYA +L A +FD+ P+R + WN+MI F+
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 83 HKFDEALSFYAKMLRTE-TKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
+ + + M R + P+ T + L + +H
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM---RE 198
Y+K + A +VF F+++ V +AMI GY + ++F M
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 199 IGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMN 258
+ P L+ + G F L G+ +H +K+GF + V + +++ Y+++ +
Sbjct: 303 VAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 259 SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
A+ F + D++++++LITG + +++ + + +G + D + +L A +
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNS 378
L + G+ HGY + HG N + +AL+DMY KCG + + VF+ M R+IVS+N+
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNT 480
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM-MDE 437
++ G G+HGL +A LF M E G+ PDE TL +L AC H+GLV +G+++F M +
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540
Query: 438 FCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEI 497
F + PR +HY + LL AG L+EAY+FV + D + G LLS C + N EL
Sbjct: 541 FNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNE 600
Query: 498 VSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
VS+++ + V+LSN Y++ RW+D R R G K PG SW+
Sbjct: 601 VSKKM-QSLGETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 210/428 (49%), Gaps = 4/428 (0%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
F SLL+ +S L+ RS S + R YA +++ A ++FD+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 65 PQRSI--FLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDG 122
P I W+ MIRA+A ++AL Y KML + +P +TY +++ C +D
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 123 LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
+++H Y+K + A KVF + +RD+V NAMISG+S
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
+ LF MR I P+ T+VG+ L L G+ +HG C + GF +
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKA--LFFYRNLSV 300
V + ++++Y++ KC+ A VF ++ + V WSA+I G+++ E K+A +FF ++
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 301 AGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGL 360
P+ I +L+ A+ D+ G +H Y ++ G ++ V + +I Y K G +
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCD 361
Query: 361 GILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCH 420
F + ++++SYNS+I+G ++ ++F+LF EM G++PD +TL G+L AC H
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSH 421
Query: 421 AGLVKDGQ 428
+ G
Sbjct: 422 LAALGHGS 429
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 8/215 (3%)
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS---AYGVFIGLYQPDL--VAWS 276
L +GQ IH LK ++ + LVN+ + N A VF + P + +AW
Sbjct: 15 LVLGQVIHQHLLKRSLTLSS--STVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWD 72
Query: 277 ALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRH 336
+I + + +KAL Y + +G + +L A A L + G IH +V
Sbjct: 73 LMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCS 132
Query: 337 GLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLF 396
+++ V +AL+D Y KCG + + I VF+ M R++V++N++ISG LH LF
Sbjct: 133 DFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLF 192
Query: 397 EEMLE-KGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+M GL P+ ST+ G+ A AG +++G+ +
Sbjct: 193 LDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAV 227
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 245/511 (47%), Gaps = 27/511 (5%)
Query: 48 YALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTY 107
Y N ++ A N+F+ P+R++ W +M++ + + EA S + +M + + ++
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSW 144
Query: 108 ACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE 167
+ G ++ +D R L+ + V EA +F + E
Sbjct: 145 TVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIG----GLCREGRVDEARLIFDEMRE 200
Query: 168 RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPD----GFTLVGLISGLMDFSLLG 223
R++V MI+GY +LF M E + G+TL G I +F
Sbjct: 201 RNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF---- 256
Query: 224 IGQGIHGLCLKSGFDCNAY-VGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGF 282
+ +K CNA VG V S+ A VF + D W +I +
Sbjct: 257 ----FEVMPMKPVIACNAMIVGFGEVGEISK------ARRVFDLMEDRDNATWRGMIKAY 306
Query: 283 LQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
+ +AL + + G + + S+L A L ++ G ++H +++R + ++
Sbjct: 307 ERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDV 366
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
V+S L+ MY+KCG + LVF+ +++I+ +NS+ISG HGL +A K+F EM
Sbjct: 367 YVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSS 426
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
G P++ TL +L AC +AG +++G EIF M +FC+ P EHY V +LG AG++++
Sbjct: 427 GTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDK 486
Query: 463 AYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYAS 522
A + S+ D+ +WGALL C H +LAE+ +++LF+NEP V+LS+I AS
Sbjct: 487 AMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINAS 546
Query: 523 DGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
+W DV R N+ K PG SWI G
Sbjct: 547 RSKWGDVAVVRKNMRTNNVSKFPGCSWIEVG 577
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 164/416 (39%), Gaps = 72/416 (17%)
Query: 23 KQLHALILRSHLSHE----SFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRA 78
K+L ++ R++L+ SF +++ R +N+ A FD ++I WNS++
Sbjct: 2 KRLKLILRRTYLTSTGVNCSFEISRLSRIGKINE----ARKFFDSLQFKAIGSWNSIVSG 57
Query: 79 FAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXX 138
+ F L A+ L E N +GL
Sbjct: 58 Y-----FSNGLPKEARQLFDEMSERNVV------------SWNGL--------------- 85
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE 198
+ Y K + EA VF + ER++V AM+ GY G G+ LF M E
Sbjct: 86 -------VSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 199 IGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMN 258
+ + + GL+D + + ++ + + + ++ R ++
Sbjct: 139 RNE-----VSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVD 189
Query: 259 SAYGVFIGLYQPDLVAWSALITGFLQCE--DYKKALFFYRNLSVAGKKADPILIASLL-- 314
A +F + + ++V W+ +ITG+ Q D + LF V +K + + LL
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF-----EVMPEKTEVSWTSMLLGY 244
Query: 315 VASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIV 374
S ++ D E+ +I +A+I + + G + VF+ M +R+
Sbjct: 245 TLSGRIEDAEEFFEVMPM-------KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 375 SYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
++ +I G +A LF +M ++G++P +L +L C ++ G+++
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+Q+HA ++R + + A+ ++ Y +L+ A +FD+ + I +WNS+I +A
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASH 410
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGC 114
+EAL + +M + T P+ T ++ C
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/499 (29%), Positives = 245/499 (49%), Gaps = 2/499 (0%)
Query: 57 AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE 116
A +FD+ R +N+MI + K +E++ + + L + KPD T + ++R C
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH 319
Query: 117 NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAM 176
DL + ++ Y+K + A VF+ + +D V N++
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 177 ISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG 236
ISGY G + ++LF M I ++Q D T + LIS + L G+G+H +KSG
Sbjct: 380 ISGYIQSGDLMEAMKLFK-MMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 237 FDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYR 296
+ V +AL++MY++ + + +F + D V W+ +I+ ++ D+ L
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG 356
+ + D L A L RLG EIH +LR G ES + + +ALI+MY KCG
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 357 FVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLC 416
+ VFE M R++V++ +I G++G +A + F +M + G+ PD ++
Sbjct: 559 CLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIY 618
Query: 417 ACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDS 476
AC H+GLV +G F +M + I P EHY +V LL + ++ +A F+ ++ D+
Sbjct: 619 ACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDA 678
Query: 477 GIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNI 536
IW ++L C G+ E AE VS+++ + P Y ++ SN YA+ +WD V R ++
Sbjct: 679 SIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSL 738
Query: 537 VNVGARKMPGLSWIGGGCN 555
+ K PG SWI G N
Sbjct: 739 KDKHITKNPGYSWIEVGKN 757
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 255/516 (49%), Gaps = 11/516 (2%)
Query: 6 SSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDK-T 64
S + S + +++HAL++ L F++ K++ Y+ + S+ ++F + +
Sbjct: 7 SPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
P ++++LWNS+IRAF+K F EAL FY K+ ++ PD +T+ +I+ C FD +
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
+++ YS+ ++ A +VF + RDLV N++ISGYS G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
++ + L++++ ++ PD FT+ ++ + ++ GQG+HG LKSG + V
Sbjct: 187 YYEEALEIYHELKN-SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL-FFYRNLSVAGK 303
+ LV MY +F+ A VF + D V+++ +I G+L+ E ++++ F NL
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF-- 303
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
K D + ++S+L A L D+ L I+ Y+L+ G V + LID+Y KCG +
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 364 VFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGL 423
VF +M ++ VS+NS+ISG G +A KLF+ M+ + D T L+
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 424 VKDGQEIFRRMMDE-FCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGAL 482
+K G+ + + CI + ++ + GE+ ++ + S M D+ W +
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLK-IFSSMGTGDTVTWNTV 480
Query: 483 LSCCDVHGNTELAEIVSQQLFDNE--PRKGAYKVML 516
+S C G+ V+ Q+ +E P + V L
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 110/280 (39%), Gaps = 21/280 (7%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K LH+ ++S + + + ++ YA ++ + +F WN++I A +
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI---LHXXXXXXXXXXXX 139
F L +M ++E PD T+ + C L R+ +H
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCAS---LAAKRLGKEIHCCLLRFGYESEL 544
Query: 140 XXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREI 199
YSK + +S+VF + RD+V MI Y G K L+ F M +
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604
Query: 200 GKQQPDGFTLVGLI-----SGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG--SALVNMYS 252
G PD + +I SGL+D L + +K+ + + + + +V++ S
Sbjct: 605 G-IVPDSVVFIAIIYACSHSGLVDEGLACFEK------MKTHYKIDPMIEHYACVVDLLS 657
Query: 253 RFKCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKA 291
R + ++ A + +PD W++++ D + A
Sbjct: 658 RSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA 697
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/533 (29%), Positives = 254/533 (47%), Gaps = 38/533 (7%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQ+H L LR + +L YA N D+ A +F + P+ ++ WN MI F +
Sbjct: 235 KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQE 294
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
++ D+++ F +M + +P+ T ++ C + D++ R
Sbjct: 295 YRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR------------------ 336
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
++FS I + + NAM+SGYS + + + F M +
Sbjct: 337 -----------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM-QFQNL 378
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
+PD TL ++S L G+ IHG+ +++ N+++ S L+ +YS + M +
Sbjct: 379 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 438
Query: 263 VFIG-LYQPDLVAWSALITGFLQCEDYKKALFFYRNL-SVAGKKADPILIASLLVASAQL 320
+F + + D+ W+++I+GF KAL +R + A + A++L + ++L
Sbjct: 439 IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRL 498
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
+ G + HG V++ G S+ V +AL DMY KCG + F+ + +N V +N +I
Sbjct: 499 CSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMI 558
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCI 440
G G +G +A L+ +M+ G KPD T +L AC H+GLV+ G EI M I
Sbjct: 559 HGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI 618
Query: 441 PPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQ 500
P +HYI IV LG AG LE+A + S +W LLS C VHG+ LA V++
Sbjct: 619 EPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAE 678
Query: 501 QLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
+L +P+ A V+LSN Y+S +WDD + + K PG SW G
Sbjct: 679 KLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYG 731
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 153/293 (52%), Gaps = 15/293 (5%)
Query: 151 KFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLV 210
K + EA +VF G+ ERD+V N MIS GF K L ++ M G P FTL
Sbjct: 50 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL-PSRFTLA 108
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC---MNSAYGVFIGL 267
++S G HG+ +K+G D N +VG+AL++MY+ KC ++ VF L
Sbjct: 109 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYA--KCGFIVDYGVRVFESL 166
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA------QLT 321
QP+ V+++A+I G + +A+ +R + G + D + ++++L SA L+
Sbjct: 167 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 226
Query: 322 DV---RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNS 378
++ LG +IH LR G ++ ++++L+++Y K + L+F M N+VS+N
Sbjct: 227 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 286
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIF 431
+I G G + ++ + M + G +P+E T +L AC +G V+ G+ IF
Sbjct: 287 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIF 339
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 5/172 (2%)
Query: 249 NMYSRFKC----MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
N + F+C + A VF G+ + D+V+W+ +I+ ++ +KAL Y+ + G
Sbjct: 42 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 101
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGF-VGLGIL 363
+AS+L A +++ D G HG ++ GL+ NI V +AL+ MY KCGF V G+
Sbjct: 102 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 161
Query: 364 VFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL 415
VFE++ N VSY +VI GL +A ++F M EKG++ D LS +L
Sbjct: 162 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 213
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 172/397 (43%), Gaps = 48/397 (12%)
Query: 45 LRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDN 104
L F DL A +FD P+R + WN+MI + ++AL Y +M+ P
Sbjct: 45 LTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSR 104
Query: 105 FTYACLIRGCHENFD-LDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSE-ASKVF 162
FT A ++ C + D + G+R H + Y+K + + +VF
Sbjct: 105 FTLASVLSACSKVLDGVFGMRC-HGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF 163
Query: 163 SGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLIS-------- 214
+ + + V A+I G + + +Q+F M E G Q D L ++S
Sbjct: 164 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKG-VQVDSVCLSNILSISAPREGC 222
Query: 215 -GLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLV 273
L + +G+ IH L L+ GF + ++ ++L+ +Y++ K MN A +F + + ++V
Sbjct: 223 DSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVV 282
Query: 274 AWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYV 333
+W+ +I GF Q K++ F + +G + + + S+L A + DV G I
Sbjct: 283 SWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI---- 338
Query: 334 LRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAF 393
F ++ ++ ++N+++SG + +A
Sbjct: 339 -------------------------------FSSIPQPSVSAWNAMLSGYSNYEHYEEAI 367
Query: 394 KLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
F +M + LKPD++TLS +L +C ++ G++I
Sbjct: 368 SNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 404
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 270/556 (48%), Gaps = 23/556 (4%)
Query: 1 MSVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLIS---A 57
M + +L +L ++ ++ QLH L+++S + ++++ F + ++ A
Sbjct: 2 MKKHYKPILSQL-ENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYA 60
Query: 58 YNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHEN 117
++F+ S+++WNSMIR ++ + D+AL FY +MLR PD FT+ +++ C
Sbjct: 61 RSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGL 120
Query: 118 FDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMI 177
D+ +H Y V+ +VF I + ++V ++I
Sbjct: 121 RDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLI 180
Query: 178 SGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGF 237
SG+ + ++ F M+ G + + + L++ G C F
Sbjct: 181 SGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC--------------GRCFDPYF 226
Query: 238 DC----NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALF 293
N + ++L++MY++ + +A +F G+ + LV+W+++ITG+ Q D ++AL
Sbjct: 227 QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALC 286
Query: 294 FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYL 353
+ ++ G D + S++ AS +LG IH YV + G + + AL++MY
Sbjct: 287 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 346
Query: 354 KCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG-LKPDESTLS 412
K G FE++ ++ +++ VI GL HG +A +F+ M EKG PD T
Sbjct: 347 KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYL 406
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ 472
G+L AC H GLV++GQ F M D + P EHY +V +L AG EEA V ++
Sbjct: 407 GVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV 466
Query: 473 PVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRT 532
+ IWGALL+ CD+H N EL + + + + E V+LSNIYA GRW DVK
Sbjct: 467 KPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLI 526
Query: 533 RDNIVNVGARKMPGLS 548
R+++ + K+ G S
Sbjct: 527 RESMKSKRVDKVLGHS 542
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 214/427 (50%), Gaps = 35/427 (8%)
Query: 158 ASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLM 217
A +V + R+ L A+I GY+ G + + + ++ MR+ + P FT L+
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRK-EEITPVSFTFSALLKACG 160
Query: 218 DFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMY-------------------------- 251
L +G+ H + C YVG+ +++MY
Sbjct: 161 TMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 252 -----SRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKAD 306
+R M A +F L D+VAW+A++TGF Q ++AL ++ + +G +AD
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 307 PILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN--IIVSSALIDMYLKCGFVGLGILV 364
+ +A + A AQL + + G + +++ SALIDMY KCG V + V
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 365 FENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML-EKGLKPDESTLSGLLCACCHAGL 423
F +M N+N+ +Y+S+I GL HG A +A LF M+ + +KP+ T G L AC H+GL
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 424 VKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALL 483
V G+++F M F + P +HY +V LLG G L+EA + ++ G+WGALL
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Query: 484 SCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARK 543
C +H N E+AEI ++ LF+ EP ++LSN+YAS G W V R R I G +K
Sbjct: 461 GACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKK 520
Query: 544 MPGLSWI 550
P +SW+
Sbjct: 521 TPAVSWV 527
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 143/346 (41%), Gaps = 37/346 (10%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAY--NLFDKTPQRSIFLWNSMIR 77
++ KQ+H +LR L + TK++R + Y + + R+ FLW ++IR
Sbjct: 63 NQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIR 122
Query: 78 AFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
+A KFDEA++ Y M + E P +FT++ L++ C DL+ R H
Sbjct: 123 GYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFC 182
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFER----------------------------- 168
Y K + A KVF + ER
Sbjct: 183 FVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLP 242
Query: 169 --DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQ 226
D+V AM++G++ + L+ F+ M + G + D T+ G IS
Sbjct: 243 TKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI-RADEVTVAGYISACAQLGASKYAD 301
Query: 227 GIHGLCLKSGFDCNAYV--GSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
+ KSG+ + +V GSAL++MYS+ + A VF+ + ++ +S++I G
Sbjct: 302 RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLAT 361
Query: 285 CEDYKKAL-FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEI 329
++AL F+ ++ K + + L+A + V G ++
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 123/309 (39%), Gaps = 40/309 (12%)
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
EI Q+ + LIS L D L + IHG L+ G D + Y+ + L+ ++
Sbjct: 40 EISNQKE--LLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVP 97
Query: 258 NSAYG--VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLV 315
Y V + + W+A+I G+ + +A+ Y + ++LL
Sbjct: 98 MDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLK 157
Query: 316 ASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS 375
A + D+ LG + H R + V + +IDMY+KC + VF+ M R+++S
Sbjct: 158 ACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVIS 217
Query: 376 YNSVI-------------------------------SGLGLHGLAAQAFKLFEEMLEKGL 404
+ +I +G + +A + F+ M + G+
Sbjct: 218 WTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI 277
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI---HIVKLLGMAGELE 461
+ DE T++G + AC G K + P ++H + ++ + G +E
Sbjct: 278 RADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSP--SDHVVIGSALIDMYSKCGNVE 335
Query: 462 EAYNFVLSL 470
EA N +S+
Sbjct: 336 EAVNVFMSM 344
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 161/547 (29%), Positives = 269/547 (49%), Gaps = 16/547 (2%)
Query: 9 LQELTKSHQTRSRTKQLHALILRSHLSH-ESFYATKILRFYALNDDLISAYNLFDKTPQR 67
L+ L K ++ Q+HA I+R L ++ + I + + L + ++F++ P
Sbjct: 13 LETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSP 72
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTE-TKPDNFTYACLIRGCHENFDLDGLRIL 126
+LWN +I+ ++ F E +S +M+RT +PD +T+ +++ C N + +
Sbjct: 73 GTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSV 132
Query: 127 HXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFW 186
H Y K + A KVF + ER+ V A++ Y G
Sbjct: 133 HGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGEL 192
Query: 187 GKGLQLFNGM--REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
+ +F+ M R +G L+ GL+ L + + K D +Y
Sbjct: 193 EEAKSMFDLMPERNLGSWN-------ALVDGLVKSGDLVNAKKLFDEMPKR--DIISY-- 241
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
+++++ Y++ M SA +F D+ AWSALI G+ Q +A + + K
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYV-LRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
D ++ L+ A +Q+ L ++ Y+ R S+ V ALIDM KCG +
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361
Query: 364 VFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGL 423
+FE M R++VSY S++ G+ +HG ++A +LFE+M+++G+ PDE + +L C + L
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 424 VKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALL 483
V++G F M ++ I +HY IV LL G+L+EAY + S+ + WG+LL
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 484 SCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARK 543
C +HGNTE+AE+V++ LF+ EP+ V+LSNIYA+ RW DV RD + G K
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Query: 544 MPGLSWI 550
+ G SWI
Sbjct: 542 ICGRSWI 548
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 159/533 (29%), Positives = 254/533 (47%), Gaps = 10/533 (1%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAF 79
++ +Q+ A +L + +F K + L D S++ LF T + + + +N MIR
Sbjct: 47 NQLRQIQAQMLLHSVEKPNFLIPKAVE---LGDFNYSSF-LFSVTEEPNHYSFNYMIRGL 102
Query: 80 AKA-HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXX 138
+ + ALS Y +M + KPD FTY + C + ++ R +H
Sbjct: 103 TNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERD 162
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE 198
Y+K V A K+F I ERD V N+MISGYS G+ + LF M E
Sbjct: 163 VHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE 222
Query: 199 IGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMN 258
G +PD TLV ++ L G+ + + + + ++GS L++MY + ++
Sbjct: 223 EG-FEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLD 281
Query: 259 SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
SA VF + + D VAW+A+IT + Q +A + + G D ++++L A
Sbjct: 282 SARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACG 341
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNS 378
+ + LG +I + L+ NI V++ L+DMY KCG V + VFE M +N ++N+
Sbjct: 342 SVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNA 401
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEF 438
+I+ G A +A LF+ M + P + T G+L AC HAGLV G F M F
Sbjct: 402 MITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMF 458
Query: 439 CIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIV 498
+ P+ EHY +I+ LL AG L+EA+ F+ D + A+L C + + E
Sbjct: 459 GLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKA 518
Query: 499 SQQLFD-NEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ L + E + V+ SN+ A WD+ + R + + G K PG SWI
Sbjct: 519 MRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWI 571
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/532 (29%), Positives = 248/532 (46%), Gaps = 83/532 (15%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQLHA LR+ + +L+ L +L+ A LFD FL+N +I+A+
Sbjct: 5 KQLHAHCLRTGVDE----TKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
H+ E++ Y + +P + T+ + LR+LH
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLH--------------- 105
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
S+ F FE D C +I+ Y+ G ++F+ M + +
Sbjct: 106 ----------------SQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK--RD 147
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
P V +A++ Y R M +A
Sbjct: 148 VP--------------------------------------VWNAMITGYQRRGDMKAAME 169
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFY----RNLSVAGKKADPILIASLLVASA 318
+F + + ++ +W+ +I+GF Q +Y +AL + ++ SV K + I + S+L A A
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV---KPNHITVVSVLPACA 226
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN-RNIVSYN 377
L ++ +G + GY +G NI V +A I+MY KCG + + +FE + N RN+ S+N
Sbjct: 227 NLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWN 286
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
S+I L HG +A LF +ML +G KPD T GLL AC H G+V GQE+F+ M +
Sbjct: 287 SMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEV 346
Query: 438 FCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEI 497
I P+ EHY ++ LLG G+L+EAY+ + ++ D+ +WG LL C HGN E+AEI
Sbjct: 347 HKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEI 406
Query: 498 VSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSW 549
S+ LF EP V++SNIYA++ +WD V R R + K G S+
Sbjct: 407 ASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSY 458
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 198/351 (56%), Gaps = 4/351 (1%)
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
P +T +I D S L IG+G+H + SGF + YV +ALV YS+ M A V
Sbjct: 105 PSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV 164
Query: 264 FIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
F + + +VAW++L++GF Q +A+ + + +G + D SLL A AQ V
Sbjct: 165 FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAV 224
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
LG+ +H Y++ GL+ N+ + +ALI++Y +CG VG VF+ M+ N+ ++ ++IS
Sbjct: 225 SLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAY 284
Query: 384 GLHGLAAQAFKLFEEMLEK-GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
G HG QA +LF +M + G P+ T +L AC HAGLV++G+ +++RM + + P
Sbjct: 285 GTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIP 344
Query: 443 RTEHYIHIVKLLGMAGELEEAYNFVLSLM---QPVDSGIWGALLSCCDVHGNTELAEIVS 499
EH++ +V +LG AG L+EAY F+ L + +W A+L C +H N +L ++
Sbjct: 345 GVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIA 404
Query: 500 QQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++L EP + VMLSNIYA G+ D+V RD ++ RK G S I
Sbjct: 405 KRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVI 455
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 203/476 (42%), Gaps = 50/476 (10%)
Query: 6 SSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTP 65
S+ + + ++ + +Q+HA ++ + TK++ + + LF P
Sbjct: 9 SAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVP 68
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI 125
FL+NS+I++ +K +++Y +ML + P N+T+ +I+ C DL LRI
Sbjct: 69 LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC---ADLSALRI 125
Query: 126 ---LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
+H T YSK + A +VF + E+ +V N+++SG+
Sbjct: 126 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 185
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
G + +Q+F MRE G + PD T V L+S + +G +H + G D N
Sbjct: 186 NGLADEAIQVFYQMRESGFE-PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVK 244
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLS-VA 301
+G+AL+N+YSR + A VF + + ++ AW+A+I+ + ++A+ + +
Sbjct: 245 LGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDC 304
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIH-----GYVLRHGLESNIIVSSALIDMYLKCG 356
G + + ++L A A V G ++ Y L G+E ++ ++DM + G
Sbjct: 305 GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDMLGRAG 360
Query: 357 FVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLC 416
F+ +A+K ++ G + + +L
Sbjct: 361 FLD-------------------------------EAYKFIHQLDATGKATAPALWTAMLG 389
Query: 417 ACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ 472
AC G EI +R++ P H++ + + ++G+ +E + +M+
Sbjct: 390 ACKMHRNYDLGVEIAKRLIA--LEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMR 443
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 135/280 (48%), Gaps = 2/280 (0%)
Query: 226 QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQC 285
Q +H + +G+ + + + L+ + + + + +F+ + PD ++++I +
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 286 EDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVS 345
+ +YR + + S++ + A L+ +R+G +H + + G + V
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 346 SALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLK 405
+AL+ Y KCG + VF+ M ++IV++NS++SG +GLA +A ++F +M E G +
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 406 PDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYN 465
PD +T LL AC G V G + + ++ E + + ++ L G++ +A
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKLGTALINLYSRCGDVGKARE 264
Query: 466 FVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDN 505
V M+ + W A++S HG + A + ++ D+
Sbjct: 265 -VFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 303
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/568 (26%), Positives = 271/568 (47%), Gaps = 35/568 (6%)
Query: 17 QTRSRTKQLHALILRSHLSHESFYATKILRFYA--LNDDLISAYNLFDKTPQRSIFLWNS 74
+T + KQLH+ + ++ + K+ F+ L + AY LF K P+ + +WN+
Sbjct: 45 KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNN 104
Query: 75 MIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFD-LDGLRILHXXXXXX 133
MI+ ++K E + Y ML+ PD+ T+ L+ G + L + LH
Sbjct: 105 MIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKF 164
Query: 134 XXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLF 193
YS + A VF + D+ N MISGY+ + + ++L
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 194 NGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSR 253
M E P TL+ ++S + + +H + + + + +ALVN Y+
Sbjct: 225 VEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAA 283
Query: 254 FKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYK------------------------ 289
M+ A +F + D+++W++++ G+++ + K
Sbjct: 284 CGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGY 343
Query: 290 -------KALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
++L +R + AG D + S+L A A L + +G I Y+ ++ +++++
Sbjct: 344 LRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV 403
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
+V +ALIDMY KCG VF +M R+ ++ +++ GL +G +A K+F +M +
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM 463
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
++PD+ T G+L AC H+G+V ++ F +M + I P HY +V +LG AG ++E
Sbjct: 464 SIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKE 523
Query: 463 AYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYAS 522
AY + + +S +WGALL +H + +AE+ ++++ + EP GA +L NIYA
Sbjct: 524 AYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAG 583
Query: 523 DGRWDDVKRTRDNIVNVGARKMPGLSWI 550
RW D++ R IV+V +K PG S I
Sbjct: 584 CKRWKDLREVRRKIVDVAIKKTPGFSLI 611
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 195/470 (41%), Gaps = 45/470 (9%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
F LL L + + K+LH +++ L + +++ Y+L + A +FD+
Sbjct: 137 FPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRR 196
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
+ +F WN MI + + +++E++ +M R P + T ++ C + D D +
Sbjct: 197 CKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCK 256
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNA--------- 175
+H AY+ + A ++F + RD++ +
Sbjct: 257 RVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERG 316
Query: 176 ----------------------MISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLI 213
MI GY G + + L++F M+ G PD FT+V ++
Sbjct: 317 NLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAG-MIPDEFTMVSVL 375
Query: 214 SGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLV 273
+ L IG+ I K+ + VG+AL++MY + C A VF + Q D
Sbjct: 376 TACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF 435
Query: 274 AWSALITGFL---QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
W+A++ G Q ++ K F +++S+ + D I +L A V +
Sbjct: 436 TWTAMVVGLANNGQGQEAIKVFFQMQDMSI---QPDDITYLGVLSACNHSGMVDQARKFF 492
Query: 331 GYVLR-HGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-NRNIVSYNSVISGLGLHGL 388
+ H +E +++ ++DM + G V + M N N + + +++ LH
Sbjct: 493 AKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHND 552
Query: 389 AAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV--KDGQEIFRRMMD 436
A +++LE L+PD + LLC +AG KD +E+ R+++D
Sbjct: 553 EPMAELAAKKILE--LEPDNGAVYALLCN-IYAGCKRWKDLREVRRKIVD 599
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 269/579 (46%), Gaps = 72/579 (12%)
Query: 42 TKILRFYALNDDLISAYNLFDKTP--QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTE 99
T ++ Y + D+ A +F+K P R ++N+MI F+ + A++ + KM
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 100 TKPDNFTYACLIRGCHENFDLDGLRI-LHXXXXXXXXXXXXXXXXXXXTAYSKF----SH 154
KPDNFT+A ++ G D + + H + YSK S
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 155 VSEASKVFSGIFERD--------------------------------LVLCNAMISGYSY 182
+ A KVF I E+D LV NAMISGY
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
GF+ + L++ M G + D FT +I LL +G+ +H L+ D + +
Sbjct: 264 RGFYQEALEMVRRMVSSGIEL-DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFH 321
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAG 302
++LV++Y + + A +F + DLV+W+AL++G++ +A ++ +
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 303 KKADPILIASL-------------------------------LVASAQLTDVRLGTEIHG 331
+ I+I+ L + + A L G + H
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Query: 332 YVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQ 391
+L+ G +S++ +ALI MY KCG V VF M + VS+N++I+ LG HG A+
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501
Query: 392 AFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIV 451
A ++EEML+KG++PD TL +L AC HAGLV G++ F M + IPP +HY ++
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLI 561
Query: 452 KLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGA 511
LL +G+ +A + + SL + IW ALLS C VHGN EL I + +LF P
Sbjct: 562 DLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG 621
Query: 512 YKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++LSN++A+ G+W++V R R + + G +K SWI
Sbjct: 622 TYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWI 660
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 188/460 (40%), Gaps = 113/460 (24%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG--FWGKG----------------- 189
Y K S ++ A ++F I E D + M+SGY G +G
Sbjct: 59 YCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNA 118
Query: 190 --------------LQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQG----IHGL 231
+ LF M+ G +PD FT +++GL +L+ + H
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGF-KPDNFTFASVLAGL---ALVADDEKQCVQFHAA 174
Query: 232 CLKSGFDCNAYVGSALVNMYSRFKC------MNSAYGVFIGLYQPD-------------- 271
LKSG V +ALV++YS KC ++SA VF + + D
Sbjct: 175 ALKSGAGYITSVSNALVSVYS--KCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 272 ------------------LVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASL 313
LVA++A+I+G++ Y++AL R + +G + D S+
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 314 LVASAQLTDVRLGTEIHGYVLR-----------------------------HGLESNIIV 344
+ A A ++LG ++H YVLR + + +V
Sbjct: 293 IRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 345 S-SALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
S +AL+ Y+ G +G L+F+ M+ +NI+S+ +ISGL +G + KLF M +G
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEA 463
+P + SG + +C G +GQ+ +++ + ++ + G +EEA
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL-KIGFDSSLSAGNALITMYAKCGVVEEA 471
Query: 464 YNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLF 503
V M +DS W AL++ HG+ A V +++
Sbjct: 472 RQ-VFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEML 510
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 151/372 (40%), Gaps = 83/372 (22%)
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVA------- 274
L + + +HG + GF A++ + L+++Y + +N A +F + +PD +A
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 275 --------------------------WSALITGFLQCEDYKKALFFYRNLSVAGKKADPI 308
++A+ITGF D A+ + + G K D
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 309 LIASLLVASAQLTD-VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKC------------ 355
AS+L A + D + + H L+ G VS+AL+ +Y KC
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 356 -----------------------GFVGLGILVFENMR-NRNIVSYNSVISGLGLHGLAAQ 391
G+ LG + E M N +V+YN++ISG G +
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 392 AFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIH-- 449
A ++ M+ G++ DE T ++ AC AGL++ G+++ ++ R + H
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR------REDFSFHFD 323
Query: 450 --IVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEP 507
+V L G+ +EA + M D W ALLS G+ A+++ +++ E
Sbjct: 324 NSLVSLYYKCGKFDEA-RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM--KEK 380
Query: 508 RKGAYKVMLSNI 519
++ +M+S +
Sbjct: 381 NILSWMIMISGL 392
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 236/493 (47%), Gaps = 73/493 (14%)
Query: 90 SFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAY 149
S +AK++RT D F LIR C
Sbjct: 93 SIHAKIIRTFHDQDAFVVFELIRVC----------------------------------- 117
Query: 150 SKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTL 209
S V A VFS + ++ L AMI G+ G G+ L++ M PD +
Sbjct: 118 STLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIH-NSVLPDNY-- 174
Query: 210 VGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG------------------------- 244
+I+ ++ L + + IH LK GF + VG
Sbjct: 175 --VITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPD 232
Query: 245 ------SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNL 298
+ ++N YS + A +F + D V W+A+I G ++ ++ KAL +R +
Sbjct: 233 RDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM 292
Query: 299 SVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFV 358
+ A+ +L A + L + LG +H +V +E + V +ALI+MY +CG +
Sbjct: 293 QMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDI 352
Query: 359 GLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
VF MR+++++SYN++ISGL +HG + +A F +M+ +G +P++ TL LL AC
Sbjct: 353 NEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 412
Query: 419 CHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGI 478
H GL+ G E+F M F + P+ EHY IV LLG G LEEAY F+ ++ D +
Sbjct: 413 SHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIM 472
Query: 479 WGALLSCCDVHGNTELAEIVSQQLFDNE-PRKGAYKVMLSNIYASDGRWDDVKRTRDNIV 537
G LLS C +HGN EL E ++++LF++E P G Y V+LSN+YAS G+W + R+++
Sbjct: 473 LGTLLSACKIHGNMELGEKIAKRLFESENPDSGTY-VLLSNLYASSGKWKESTEIRESMR 531
Query: 538 NVGARKMPGLSWI 550
+ G K PG S I
Sbjct: 532 DSGIEKEPGCSTI 544
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/505 (22%), Positives = 213/505 (42%), Gaps = 82/505 (16%)
Query: 9 LQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRS 68
L + +S + + +HA I+R+ ++F +++R + D + AY++F +
Sbjct: 78 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 137
Query: 69 IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHX 128
++L+ +MI F + + + +S Y +M+ PDN+ +++ C DL R +H
Sbjct: 138 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHA 193
Query: 129 XXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGK 188
Y K + A K+F + +RD V MI+ YS CGF +
Sbjct: 194 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 253
Query: 189 GLQLFNGM------------------REIGKQ------------QPDGFTLVGLISGLMD 218
L+LF + +E+ K + FT V ++S D
Sbjct: 254 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 313
Query: 219 FSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSAL 278
L +G+ +H + + +VG+AL+NMYSR +N A VF + D+++++ +
Sbjct: 314 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 373
Query: 279 ITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL 338
I+G +A+ +R++ G + + + + +LL A + HG
Sbjct: 374 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACS-----------HG------- 415
Query: 339 ESNIIVSSALIDMYLKCGFVGLGILVFENMR-----NRNIVSYNSVISGLGLHGLAAQAF 393
G + +G+ VF +M+ I Y ++ LG G +A+
Sbjct: 416 -----------------GLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAY 458
Query: 394 KLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKL 453
+ E + ++PD L LL AC G ++ G++I +R+ + P + Y+ + L
Sbjct: 459 RFIENI---PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE--NPDSGTYVLLSNL 513
Query: 454 LGMAGELEEAYNFVLSLMQPVDSGI 478
+G+ +E+ S+ DSGI
Sbjct: 514 YASSGKWKESTEIRESMR---DSGI 535
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 143/330 (43%), Gaps = 50/330 (15%)
Query: 201 KQQPDGFTL-----VGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFK 255
++ PD TL LIS L + IH +++ D +A+V L+ + S
Sbjct: 62 RRDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLD 121
Query: 256 CMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLV 315
++ AY VF + P++ ++A+I GF+ + Y + D +I S+L
Sbjct: 122 SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLK 181
Query: 316 ASAQLTDVRLGTEIHGYVLRHGLES-------------------------------NIIV 344
A D+++ EIH VL+ G S + +
Sbjct: 182 A----CDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVA 237
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
++ +I+ Y +CGF+ + +F++++ ++ V + ++I GL + +A +LF EM + +
Sbjct: 238 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 297
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTE--HYI--HIVKLLGMAGEL 460
+E T +L AC G ++ G R + F R E +++ ++ + G++
Sbjct: 298 SANEFTAVCVLSACSDLGALELG-----RWVHSFVENQRMELSNFVGNALINMYSRCGDI 352
Query: 461 EEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
EA V +M+ D + ++S +HG
Sbjct: 353 NEARR-VFRVMRDKDVISYNTMISGLAMHG 381
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 225/405 (55%), Gaps = 12/405 (2%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFT 208
Y KF+ +++A ++F + +R+++ MIS YS C K L+L M +P+ +T
Sbjct: 106 YVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYT 164
Query: 209 LVGLI---SGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFI 265
++ +G+ D +L G +K G + + +V SAL++++++ A VF
Sbjct: 165 YSSVLRSCNGMSDVRMLHCG------IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 266 GLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRL 325
+ D + W+++I GF Q AL ++ + AG A+ + S+L A L + L
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 326 GTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGL 385
G + H +++++ + ++I+++AL+DMY KCG + + VF M+ R++++++++ISGL
Sbjct: 279 GMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 386 HGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTE 445
+G + +A KLFE M G KP+ T+ G+L AC HAGL++DG FR M + I P E
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 446 HYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDN 505
HY ++ LLG AG+L++A + + D+ W LL C V N LAE ++++
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456
Query: 506 EPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+P +LSNIYA+ +WD V+ R + + G +K PG SWI
Sbjct: 457 DPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 10/275 (3%)
Query: 45 LRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDN 104
++F LND A+ LFD+ PQR++ W +MI A++K +AL MLR +P+
Sbjct: 107 VKFNLLND----AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162
Query: 105 FTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSG 164
+TY+ ++R C+ + +R+LH ++K +A VF
Sbjct: 163 YTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 165 IFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGI 224
+ D ++ N++I G++ L+LF M+ G TL ++ +LL +
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA-TLTSVLRACTGLALLEL 278
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
G H +K +D + + +ALV+MY + + A VF + + D++ WS +I+G Q
Sbjct: 279 GMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
++AL + + +G K + I I +L A +
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAF 79
S + LH I++ L + F + ++ +A + A ++FD+ +WNS+I F
Sbjct: 176 SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXX 139
A+ + D AL + +M R + T ++R C GL +L
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC------TGLALLELGMQAHVHIVKY 289
Query: 140 XXXXXXXTA----YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNG 195
A Y K + +A +VF+ + ERD++ + MISG + G+ + L+LF
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 196 MREIGKQQPDGFTLVGLI 213
M+ G +P+ T+VG++
Sbjct: 350 MKSSG-TKPNYITIVGVL 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 287 DYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSS 346
D +A+ +L G AD + L+ V G I ++ +G + + +
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 347 ALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKP 406
LI+MY+K + +F+ M RN++S+ ++IS + +A +L ML ++P
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 407 DESTLSGLLCAC--------CHAGLVKDGQE--IFRRMMDEFCIPPRTEHYIHIVKLLGM 456
+ T S +L +C H G++K+G E +F R ++ +
Sbjct: 161 NVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSA--------------LIDVFAK 206
Query: 457 AGELEEAYNFVLSLMQPVDSGIWGALL 483
GE E+A + V M D+ +W +++
Sbjct: 207 LGEPEDALS-VFDEMVTGDAIVWNSII 232
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 220/404 (54%), Gaps = 2/404 (0%)
Query: 148 AYSKFSHVSEAS-KVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDG 206
AYSK +H+ S VF + R++ N +I +S GF K + LF M +PD
Sbjct: 56 AYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDD 115
Query: 207 FTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIG 266
FTL ++ G IH LCLK GF + +V SALV MY + A +F
Sbjct: 116 FTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDD 175
Query: 267 LYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
+ D V ++A+ G++Q + L +R + +G D +++ SLL+A QL ++ G
Sbjct: 176 MPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 235
Query: 327 TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLH 386
+HG+ +R + + +A+ DMY+KC + VF NM R+++S++S+I G GL
Sbjct: 236 KSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLD 295
Query: 387 GLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEH 446
G +FKLF+EML++G++P+ T G+L AC H GLV+ F R+M E+ I P +H
Sbjct: 296 GDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF-RLMQEYNIVPELKH 354
Query: 447 YIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNE 506
Y + + AG LEEA F+ + D + GA+LS C V+GN E+ E V+++L +
Sbjct: 355 YASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLK 414
Query: 507 PRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
PRK +Y V L+ +Y++ GR+D+ + R + K+PG S I
Sbjct: 415 PRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 458
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 187/430 (43%), Gaps = 56/430 (13%)
Query: 44 ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTE-TKP 102
+L + LN ++ ++F P R+IF WN +I F+++ +++ + +M R +P
Sbjct: 54 VLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRP 113
Query: 103 DNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVF 162
D+FT ++R C + + ++H Y + A K+F
Sbjct: 114 DDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLF 173
Query: 163 SGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTL--VGLISGLMDFS 220
+ RD VL AM GY G GL +F RE+G GF L V ++S LM
Sbjct: 174 DDMPVRDSVLYTAMFGGYVQQGEAMLGLAMF---REMGYS---GFALDSVVMVSLLMACG 227
Query: 221 LLGI---GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSA 277
LG G+ +HG C++ +G+A+ +MY + ++ A+ VF+ + + D+++WS+
Sbjct: 228 QLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSS 287
Query: 278 LITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG 337
LI G+ G D +V S +L D +L+ G
Sbjct: 288 LILGY-------------------GLDGD-------VVMSFKLFD---------EMLKEG 312
Query: 338 LESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS----YNSVISGLGLHGLAAQAF 393
+E N + ++ G V L F M+ NIV Y SV + GL +A
Sbjct: 313 IEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAE 372
Query: 394 KLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKL 453
K E+M +KPDE+ + +L C G V+ G+ + R ++ P + +Y+ + L
Sbjct: 373 KFLEDM---PVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ--LKPRKASYYVTLAGL 427
Query: 454 LGMAGELEEA 463
AG +EA
Sbjct: 428 YSAAGRFDEA 437
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 245/508 (48%), Gaps = 2/508 (0%)
Query: 44 ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPD 103
+L Y D + A +LFD+ QR + WN+MI +A E L +M +PD
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 104 NFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFS 163
T+ + DL+ R+LH T Y K + +V
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 164 GIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLG 223
I +D+V MISG G K L +F+ M + G + +++
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSE-AIASVVASCAQLGSFD 363
Query: 224 IGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
+G +HG L+ G+ + ++L+ MY++ ++ + +F + + DLV+W+A+I+G+
Sbjct: 364 LGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYA 423
Query: 284 QCEDYKKALFFYRNLSVAG-KKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
Q D KAL + + ++ D + SLL A + + +G IH V+R +
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCS 483
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
+V +AL+DMY KCG++ F+++ +++VS+ +I+G G HG A +++ E L
Sbjct: 484 LVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHS 543
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
G++P+ +L +C H G+V+ G +IF M+ +F + P EH +V LL A +E+
Sbjct: 544 GMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIED 603
Query: 463 AYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYAS 522
A+ F + G +L C +G TE+ +I+ + + + +P + V L + +A+
Sbjct: 604 AFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAA 663
Query: 523 DGRWDDVKRTRDNIVNVGARKMPGLSWI 550
RWDDV + + + ++G +K+PG S I
Sbjct: 664 MKRWDDVSESWNQMRSLGLKKLPGWSKI 691
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 153/517 (29%), Positives = 248/517 (47%), Gaps = 10/517 (1%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
F SLL+ S Q S +H +L + S + + ++ ++ YA L A +F++
Sbjct: 49 FPSLLKACA-SLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEM 107
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
+R + W +MI +++A EA S +M KP T ++ G E + L+
Sbjct: 108 RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE---ITQLQ 164
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
LH Y K HV +A +F + +RD+V N MISGY+ G
Sbjct: 165 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
+ L+L MR G +PD T +S L +G+ +H +K+GFD + ++
Sbjct: 225 NMSEILKLLYRMRGDG-LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK 283
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
+AL+ MY + ++Y V + D+V W+ +I+G ++ +KAL + + +G
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILV 364
IAS++ + AQL LG +HGYVLRHG + ++LI MY KCG + +++
Sbjct: 344 LSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVI 403
Query: 365 FENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKP-DESTLSGLLCACCHAGL 423
FE M R++VS+N++ISG + +A LFEEM K ++ D T+ LL AC AG
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 424 VKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALL 483
+ G+ I ++ F I P + +V + G LE A S+ D WG L+
Sbjct: 464 LPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILI 521
Query: 484 SCCDVHGNTELA-EIVSQQLFDN-EPRKGAYKVMLSN 518
+ HG ++A EI S+ L EP + +LS+
Sbjct: 522 AGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 172/352 (48%), Gaps = 6/352 (1%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLD-GLRILHXXX 130
+NS I + + LS ++ ML + PD FT+ L++ C L GL I H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSI-HQQV 72
Query: 131 XXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGL 190
Y+KF ++ A KVF + ERD+V AMI YS G G+
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 191 QLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNM 250
L N MR G + P TL+ ++SG+++ + L Q +H + GFDC+ V ++++N+
Sbjct: 133 SLVNEMRFQGIK-PGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 251 YSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILI 310
Y + + A +F + Q D+V+W+ +I+G+ + + L + G + D
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Query: 311 ASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN 370
+ L S + D+ +G +H +++ G + ++ + +ALI MYLKCG V E + N
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN 308
Query: 371 RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAG 422
+++V + +ISGL G A +A +F EML+ G ++ ++ +C G
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLG 360
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 150/531 (28%), Positives = 254/531 (47%), Gaps = 10/531 (1%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
L++ I++ S T +L Y+ DL SA +FD R WN+MI K K
Sbjct: 221 LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDK 280
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
++ L F+ ML + P FTY+ ++ GC + +++H
Sbjct: 281 IEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA 340
Query: 145 XXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
Y + EA VF I +LV N++ISG S GF + + ++ + + +P
Sbjct: 341 LLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF 264
D +T IS + G+ +HG K G++ + +VG+ L++MY + + SA VF
Sbjct: 401 DEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
Query: 265 IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVR 324
+ + D+V W+ +I G + + + A+ F+ + ++D ++S++ A + + +R
Sbjct: 461 DVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLR 520
Query: 325 LGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLG 384
G H +R G + + V AL+DMY K G +F N ++ +NS++
Sbjct: 521 QGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYS 580
Query: 385 LHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRT 444
HG+ +A FE++LE G PD T LL AC H G G+ ++ +M ++ I
Sbjct: 581 QHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGF 639
Query: 445 EHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG-----IWGALLSCCDVHGNTELAEIVS 499
+HY +V L+ AG ++EA L L++ G +W LLS C N ++ +
Sbjct: 640 KHYSCMVNLVSKAGLVDEA----LELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAA 695
Query: 500 QQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+Q+ +P A ++LSN+YA +GRW+DV R I + + K PGLSWI
Sbjct: 696 EQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWI 746
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 226/516 (43%), Gaps = 23/516 (4%)
Query: 4 KFSSLLQELTK---SHQTRSRTKQLHALILRSHL--SHESFYATK-ILRFYALNDDLISA 57
+ +S + ELT+ S R +Q+HAL+L + + ES YA ++ Y L A
Sbjct: 92 EIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQA 151
Query: 58 YNLFDKTPQRSIFLWNSMIRAFAKAHKFDE-ALSFYAKMLRTETKPDNFTYACLIRGCHE 116
+FDK P R++ +N++ A+++ F A M KP++ T+ L++ C
Sbjct: 152 RKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAV 211
Query: 117 NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAM 176
D+ L+ YS + A ++F + RD V N M
Sbjct: 212 LEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTM 271
Query: 177 ISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG 236
I G GL F M G P FT +++G +G+ IH + S
Sbjct: 272 IVGSLKNDKIEDGLMFFRNMLMSGV-DPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 237 FDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYR 296
+ + +AL++MY M A+ VF ++ P+LV+W+++I+G + ++A+ YR
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYR 390
Query: 297 N-LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKC 355
L ++ + D ++ + A+A+ G +HG V + G E ++ V + L+ MY K
Sbjct: 391 RLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKN 450
Query: 356 GFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL 415
VF+ M+ R++V + +I G G + A + F EM + + D +LS ++
Sbjct: 451 REAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVI 510
Query: 416 CACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI------HIVKLLGMAGELEEAYNFVLS 469
AC +++ G E+F C+ RT +V + G G+ E A + S
Sbjct: 511 GACSDMAMLRQG-EVFH------CLAIRTGFDCVMSVCGALVDMYGKNGKYETAET-IFS 562
Query: 470 LMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDN 505
L D W ++L HG E A +Q+ +N
Sbjct: 563 LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILEN 598
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 175/381 (45%), Gaps = 22/381 (5%)
Query: 147 TAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDG 206
+ Y + S + +A KVF + +R++V + + + Y G L + + ++G Q
Sbjct: 30 SMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSM---GSSLHSQIIKLGSFQMIF 86
Query: 207 F--------TLVGLISGLMDFSLLGIGQGIHGLCLKSGFDC---NAYVGSALVNMYSRFK 255
F ++V L + ++L + IH L L +G + Y + L++MY R
Sbjct: 87 FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCG 146
Query: 256 CMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALF-FYRNLSVAGKKADPILIASLL 314
+ A VF + ++V+++AL + + + D+ F +++ K + SL+
Sbjct: 147 SLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLV 206
Query: 315 VASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIV 374
A L DV +G+ ++ +++ G N++V ++++ MY CG + +F+ + NR+ V
Sbjct: 207 QVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAV 266
Query: 375 SYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
++N++I G + F ML G+ P + T S +L C G G+ I R+
Sbjct: 267 AWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARI 326
Query: 435 M--DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNT 492
+ D P ++ + G++ EA+ +V + + W +++S C +G
Sbjct: 327 IVSDSLADLPLDN---ALLDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 493 ELAEIVSQQLFD-NEPRKGAY 512
E A ++ ++L + PR Y
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEY 403
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 1/193 (0%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K LH + + F T +L Y N + SA +FD +R + LW MI ++
Sbjct: 422 KLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRL 481
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ A+ F+ +M R + + D F+ + +I C + L + H
Sbjct: 482 GNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVC 541
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y K A +FS DL N+M+ YS G K L F + E G
Sbjct: 542 GALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGF- 600
Query: 203 QPDGFTLVGLISG 215
PD T + L++
Sbjct: 601 MPDAVTYLSLLAA 613
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 150/533 (28%), Positives = 264/533 (49%), Gaps = 11/533 (2%)
Query: 23 KQLHALILRSHL-SHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
K++HA +L+S S E + ++ Y + A + + + WNS+I+ + +
Sbjct: 267 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 326
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
+ EAL F++ M+ K D + +I +L LH
Sbjct: 327 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 386
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
YSK + + F + ++DL+ +I+GY+ + L+LF R++ K
Sbjct: 387 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF---RDVAK 443
Query: 202 Q--QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
+ + D L ++ + I + IH L+ G + + + LV++Y + + M
Sbjct: 444 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGY 502
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
A VF + D+V+W+++I+ + +A+ +R + G AD + + +L A+A
Sbjct: 503 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 562
Query: 320 LTDVRLGTEIHGYVLRHG--LESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYN 377
L+ + G EIH Y+LR G LE +I V A++DMY CG + VF+ + + ++ Y
Sbjct: 563 LSALNKGREIHCYLLRKGFCLEGSIAV--AVVDMYACCGDLQSAKAVFDRIERKGLLQYT 620
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
S+I+ G+HG A +LF++M + + PD + LL AC HAGL+ +G+ + M E
Sbjct: 621 SMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHE 680
Query: 438 FCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEI 497
+ + P EHY+ +V +LG A + EA+ FV + + +W ALL+ C H E+ EI
Sbjct: 681 YELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEI 740
Query: 498 VSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+Q+L + EP+ V++SN++A GRW+DV++ R + G K PG SWI
Sbjct: 741 AAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 793
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 194/366 (53%), Gaps = 5/366 (1%)
Query: 55 ISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNF-TYACLIRG 113
+S +FD+ P R+ F WN+MI A+ + AL+ Y M R E P ++ L++
Sbjct: 96 VSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKA 154
Query: 114 CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER-DLVL 172
C + D+ LH + Y+K +S A ++F G E+ D VL
Sbjct: 155 CAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 214
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLC 232
N+++S YS G + L+LF M G P+ +T+V ++ FS +G+ IH
Sbjct: 215 WNSILSSYSTSGKSLETLELFREMHMTGP-APNSYTIVSALTACDGFSYAKLGKEIHASV 273
Query: 233 LKSGFDCNA-YVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKA 291
LKS + YV +AL+ MY+R M A + + D+V W++LI G++Q YK+A
Sbjct: 274 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 333
Query: 292 LFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDM 351
L F+ ++ AG K+D + + S++ AS +L+++ G E+H YV++HG +SN+ V + LIDM
Sbjct: 334 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 393
Query: 352 YLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTL 411
Y KC F M +++++S+ +VI+G + +A +LF ++ +K ++ DE L
Sbjct: 394 YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 453
Query: 412 SGLLCA 417
+L A
Sbjct: 454 GSILRA 459
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 237/465 (50%), Gaps = 14/465 (3%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
F +LL+ K RS + +LH+L+++ F ++ YA NDDL +A LFD
Sbjct: 148 FPALLKACAKLRDIRSGS-ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 206
Query: 65 PQR-SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGL 123
++ LWNS++ +++ + K E L + +M T P+++T + C + F L
Sbjct: 207 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC-DGFSYAKL 265
Query: 124 -RILHXXXXXXXXXXXXXXXXXXXTA-YSKFSHVSEASKVFSGIFERDLVLCNAMISGYS 181
+ +H A Y++ + +A ++ + D+V N++I GY
Sbjct: 266 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 325
Query: 182 YCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNA 241
+ + L+ F+ M G + D ++ +I+ S L G +H +K G+D N
Sbjct: 326 QNLMYKEALEFFSDMIAAG-HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 384
Query: 242 YVGSALVNMYSRFKCMNSAY--GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
VG+ L++MYS KC + Y F+ ++ DL++W+ +I G+ Q + + +AL +R+++
Sbjct: 385 QVGNTLIDMYS--KCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 442
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
+ D +++ S+L AS+ L + + EIH ++LR GL + ++ + L+D+Y KC +G
Sbjct: 443 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMG 501
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
VFE+++ +++VS+ S+IS L+G ++A +LF M+E GL D L +L A
Sbjct: 502 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 561
Query: 420 HAGLVKDGQEIFRRMMDE-FCIPPRTEHYIHIVKLLGMAGELEEA 463
+ G+EI ++ + FC+ + +V + G+L+ A
Sbjct: 562 SLSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQSA 604
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 6/228 (2%)
Query: 259 SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
S VF + AW+ +I ++ + AL Y N+ V G +LL A A
Sbjct: 97 SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 156
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR-NIVSYN 377
+L D+R G+E+H +++ G S + +AL+ MY K + +F+ + + + V +N
Sbjct: 157 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 216
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
S++S G + + +LF EM G P+ T+ L AC K G+EI ++
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276
Query: 438 FCIPPRTEHYI--HIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALL 483
+E Y+ ++ + G++ +A +L M D W +L+
Sbjct: 277 S--THSSELYVCNALIAMYTRCGKMPQAER-ILRQMNNADVVTWNSLI 321
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 248/528 (46%), Gaps = 1/528 (0%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ LHA +++ L + + +L Y + + +F + P R+ W ++I A
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHA 187
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
++ E L+++++M R+E D +T+A ++ C + + +H
Sbjct: 188 GRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVA 247
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
T Y++ + + +F + ERD+V ++I Y G K ++ F MR +
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN-SQV 306
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
P+ T + S S L G+ +H L G + + V ++++ MYS + SA
Sbjct: 307 PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV 366
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
+F G+ D+++WS +I G+ Q ++ ++ + +G K +ASLL S +
Sbjct: 367 LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAV 426
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISG 382
+ G ++H L GLE N V S+LI+MY KCG + ++F +IVS ++I+G
Sbjct: 427 IEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
HG + +A LFE+ L+ G +PD T +L AC H+G + G F M + + + P
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 443 RTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQL 502
EHY +V LL AG L +A + + D +W LL C G+ E ++++
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERI 606
Query: 503 FDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ +P V L+NIY+S G ++ R N+ G K PG S I
Sbjct: 607 LELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSI 654
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 179/380 (47%), Gaps = 3/380 (0%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTE--TKPDNFTYACL 110
+L +A +FDK P I W S+I+ + A+ DEAL ++ M + PD + +
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL 170
++ C ++ ++ LH Y + + ++ +VFS + R+
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 171 VLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHG 230
V A+I+G + G + +GL F+ M ++ D +T + + G+ IH
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSR-SEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 231 LCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKK 290
+ GF V ++L MY+ M +F + + D+V+W++LI + + K
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 291 ALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALID 350
A+ + + + + AS+ A A L+ + G ++H VL GL ++ VS++++
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 351 MYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDEST 410
MY CG + ++F+ MR R+I+S++++I G G + FK F M + G KP +
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 411 LSGLLCACCHAGLVKDGQEI 430
L+ LL + +++ G+++
Sbjct: 414 LASLLSVSGNMAVIEGGRQV 433
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 265/548 (48%), Gaps = 14/548 (2%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
F LQ+L K ++ KQLHA I+R +L + A K++ +L A +F++
Sbjct: 19 FEERLQDLPKCANL-NQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQV 77
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
+ ++ L NS+IRA A+ + +A +++M R DNFTY L++ C L ++
Sbjct: 78 QEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVK 137
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSH--VSEASKVFSGIFERDLVLCNAMISGYSY 182
++H YS+ V +A K+F + ERD V N+M+ G
Sbjct: 138 MMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVK 197
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
G +LF+ M Q D + ++ G + + + + N
Sbjct: 198 AGELRDARRLFDEM-----PQRDLISWNTMLDGYARCREMSKAFEL----FEKMPERNTV 248
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQP--DLVAWSALITGFLQCEDYKKALFFYRNLSV 300
S +V YS+ M A +F + P ++V W+ +I G+ + K+A +
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 301 AGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGL 360
+G K D + S+L A + + LG IH + R L SN V +AL+DMY KCG +
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 361 GILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCH 420
VF ++ +++VS+N+++ GLG+HG +A +LF M +G++PD+ T +LC+C H
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 428
Query: 421 AGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWG 480
AGL+ +G + F M + + P+ EHY +V LLG G L+EA V ++ + IWG
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 488
Query: 481 ALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVG 540
ALL C +H ++A+ V L +P +LSNIYA+ W+ V R + ++G
Sbjct: 489 ALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 548
Query: 541 ARKMPGLS 548
K G S
Sbjct: 549 VEKPSGAS 556
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/517 (29%), Positives = 250/517 (48%), Gaps = 13/517 (2%)
Query: 36 HESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKM 95
H S Y TK++ Y ++ L+ A NLFD+ P R + WNSMI + + A+ + +M
Sbjct: 65 HVSLY-TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 96 LRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHV 155
++ ++ GC + +D L Y +F V
Sbjct: 124 PERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVH----GYLQFGKV 175
Query: 156 SEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM-REIGKQQPDGFTLVGLIS 214
+A K+F + ++++ MI G G+ L LF M R K FT V I+
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV--IT 233
Query: 215 GLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVA 274
+ +G +HGL +K GF YV ++L+ Y+ K + + VF +
Sbjct: 234 ACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV 293
Query: 275 WSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVL 334
W+AL++G+ + ++ AL + + + AS L + + L + G E+HG +
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAV 353
Query: 335 RHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFK 394
+ GLE++ V ++L+ MY G V + VF + ++IVS+NS+I G HG AF
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFV 413
Query: 395 LFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC-IPPRTEHYIHIVKL 453
+F +M+ +PDE T +GLL AC H G ++ G+++F M I + +HY +V +
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 454 LGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYK 513
LG G+L+EA + ++ + +W ALLS C +H + + E + +F+ + + A
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY 533
Query: 514 VMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V+LSNIYAS GRW +V + R + G K PG SW+
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 174/392 (44%), Gaps = 36/392 (9%)
Query: 155 VSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM--REIGKQQP-------- 204
+ EA +VF+ + + L MI+GY+ L LF+ M R++
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 205 -DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG--------------FDCNAYVGSALVN 249
D T V L + + S++ ++G C +SG D A+ +++V+
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNG-CFRSGKVDQAERLFYQMPVKDTAAW--NSMVH 167
Query: 250 MYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPIL 309
Y +F ++ A +F + ++++W+ +I G Q E +AL ++N+ K+
Sbjct: 168 GYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP 227
Query: 310 IASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR 369
++ A A +G ++HG +++ G VS++LI Y C +G VF+
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 370 NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQE 429
+ + + +++SG L+ A +F ML + P++ST + L +C G + G+E
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE 347
Query: 430 IFRRMMDEFCIPPRTEHYI--HIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCD 487
+ + + T+ ++ +V + +G + +A + + + + W +++ C
Sbjct: 348 MHGVAVK---LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS-WNSIIVGCA 403
Query: 488 VHGNTELAEIVSQQL--FDNEPRKGAYKVMLS 517
HG + A ++ Q+ + EP + + +LS
Sbjct: 404 QHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 1/205 (0%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
Q+H LI++ +E + + ++ FYA + + +FD+ + +W +++ ++
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
K ++ALS ++ MLR P+ T+A + C LD + +H
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
YS +V++A VF IF++ +V N++I G + G +F M + K +
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK-E 424
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGI 228
PD T GL+S L G+ +
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKL 449
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 219/431 (50%), Gaps = 31/431 (7%)
Query: 151 KFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLV 210
K + A+++F+ + ++ L N++I Y++ + ++++ + + PD FT
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFP 113
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP 270
+ +G+ +HG K G + +AL++MY +F + A+ VF +Y+
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER 173
Query: 271 DLVAWSALITGFLQCEDYKKA--LF-----------------------------FYRNLS 299
D+++W++L++G+ + KKA LF F+R +
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQ 233
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
+AG + D I + S+L + AQL + LG IH Y R G V +ALI+MY KCG +
Sbjct: 234 LAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVIS 293
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
I +F M ++++S++++ISG HG A A + F EM +KP+ T GLL AC
Sbjct: 294 QAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACS 353
Query: 420 HAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIW 479
H G+ ++G F M ++ I P+ EHY ++ +L AG+LE A ++ DS IW
Sbjct: 354 HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIW 413
Query: 480 GALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNV 539
G+LLS C GN ++A + L + EP V+L+NIYA G+W+DV R R I N
Sbjct: 414 GSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNE 473
Query: 540 GARKMPGLSWI 550
+K PG S I
Sbjct: 474 NMKKTPGGSLI 484
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 168/385 (43%), Gaps = 34/385 (8%)
Query: 17 QTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMI 76
++R+ K+++A I+ LS SF TK++ F +D+ A LF++ ++FL+NS+I
Sbjct: 21 KSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSII 80
Query: 77 RAFAKAHKFDEALSFYAKMLRTETK-PDNFTYACLIRGCHENFDLDGLRILHXXXXXXXX 135
RA+ + + + Y ++LR + PD FT+ + + C + +H
Sbjct: 81 RAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGP 140
Query: 136 XXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCN--------------------- 174
Y KF + +A KVF ++ERD++ N
Sbjct: 141 RFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHL 200
Query: 175 ----------AMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGI 224
AMISGY+ G + + + F M+ G +PD +L+ ++ L +
Sbjct: 201 MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI-EPDEISLISVLPSCAQLGSLEL 259
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
G+ IH + GF V +AL+ MYS+ ++ A +F + D+++WS +I+G+
Sbjct: 260 GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAY 319
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLR-HGLESNII 343
+ A+ + + A K + I LL A + + + G + + + +E I
Sbjct: 320 HGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE 379
Query: 344 VSSALIDMYLKCGFVGLGILVFENM 368
LID+ + G + + + + M
Sbjct: 380 HYGCLIDVLARAGKLERAVEITKTM 404
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 38/235 (16%)
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCED 287
IHGL S ++ + +V+ + + M+ A +F + P++ ++++I +
Sbjct: 35 IHGLSQSS------FMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSL 88
Query: 288 YKKALFFYRNL-SVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSS 346
Y + Y+ L + + D + + A L LG ++HG++ + G +++ +
Sbjct: 89 YCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTEN 148
Query: 347 ALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK---- 402
ALIDMY+K + VF+ M R+++S+NS++SG G +A LF ML+K
Sbjct: 149 ALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVS 208
Query: 403 ---------------------------GLKPDESTLSGLLCACCHAGLVKDGQEI 430
G++PDE +L +L +C G ++ G+ I
Sbjct: 209 WTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWI 263
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 249/513 (48%), Gaps = 8/513 (1%)
Query: 44 ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPD 103
++ YA + A +F + WNSMI + F EA+ Y M R + P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 104 NFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFS 163
+FT + C + +H T Y++ +++E K+FS
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 164 GIFERDLVLCNAMISGY--SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSL 221
+ E D V N++I S + N R Q+ + T ++S + S
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR--AGQKLNRITFSSVLSAVSSLSF 532
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP-DLVAWSALIT 280
+G+ IHGL LK+ A +AL+ Y + M+ +F + + D V W+++I+
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLES 340
G++ E KAL + G++ D + A++L A A + + G E+H +R LES
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 341 NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEM- 399
+++V SAL+DMY KCG + + F M RN S+NS+ISG HG +A KLFE M
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 400 LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGE 459
L+ PD T G+L AC HAGL+++G + F M D + + PR EH+ + +LG AGE
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 460 LEEAYNFVLSLMQPVDSGIWGALL-SCCDVHG-NTELAEIVSQQLFDNEPRKGAYKVMLS 517
L++ +F+ + + IW +L +CC +G EL + ++ LF EP V+L
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLG 832
Query: 518 NIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
N+YA+ GRW+D+ + R + + +K G SW+
Sbjct: 833 NMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 191/422 (45%), Gaps = 11/422 (2%)
Query: 19 RSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRA 78
R + H+ + ++ L + + ++ Y D +SA +FD+ P R+ W ++
Sbjct: 17 RGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSG 76
Query: 79 FAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGL--RILHXXXXXXXXX 136
+++ + EAL F M++ + + + ++R C E + L R +H
Sbjct: 77 YSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYA 136
Query: 137 XXXXXXXXXXTAYSK-FSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNG 195
+ Y K V A F I ++ V N++IS YS G ++F+
Sbjct: 137 VDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSS 196
Query: 196 MREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL--KSGFDCNAYVGSALVNMYSR 253
M+ G +P +T L++ + + +C KSG + +VGS LV+ +++
Sbjct: 197 MQYDG-SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK 255
Query: 254 FKCMNSAYGVFIGLYQPDLVAWSALITGFLQ---CEDYKKALFFYRNLSVAGKKADPILI 310
++ A VF + + V + L+ G ++ E+ K ++ ++ IL+
Sbjct: 256 SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL 315
Query: 311 ASLLVAS-AQLTDVRLGTEIHGYVLRHGLESNII-VSSALIDMYLKCGFVGLGILVFENM 368
+S S A+ ++ G E+HG+V+ GL ++ + + L++MY KCG + VF M
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 369 RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQ 428
+++ VS+NS+I+GL +G +A + ++ M + P TL L +C K GQ
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 429 EI 430
+I
Sbjct: 436 QI 437
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 127/297 (42%), Gaps = 4/297 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+Q+H L+ + + ++ YA L +F P+ WNS+I A A++
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 83 HK-FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
+ EA+ + R K + T++ ++ + + +H
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFE-RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y K + K+FS + E RD V N+MISGY + K L L M + G
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
Q+ D F ++S + L G +H +++ + + VGSALV+MYS+ ++ A
Sbjct: 615 -QRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK-KADPILIASLLVA 316
F + + +W+++I+G+ + ++AL + + + G+ D + +L A
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSA 730
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 18 TRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIR 77
T R ++HA +R+ L + + ++ Y+ L A F+ P R+ + WNSMI
Sbjct: 634 TLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMIS 693
Query: 78 AFAKAHKFDEALSFYAKM-LRTETKPDNFTYACLIRGC 114
+A+ + +EAL + M L +T PD+ T+ ++ C
Sbjct: 694 GYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSAC 731
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 218/407 (53%), Gaps = 3/407 (0%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM--REIGKQQPDG 206
Y + H A K+F + ERDLV N++ISGYS G+ GK ++ + M E+G +P+
Sbjct: 76 YLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG-FRPNE 134
Query: 207 FTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIG 266
T + +IS + G+ IHGL +K G V +A +N Y + + S+ +F
Sbjct: 135 VTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFED 194
Query: 267 LYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
L +LV+W+ +I LQ +K L ++ G + D ++L + + VRL
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 327 TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLH 386
IHG ++ G N +++AL+D+Y K G + VF + + + +++ ++++ H
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH 314
Query: 387 GLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEH 446
G A K FE M+ G+ PD T + LL AC H+GLV++G+ F M + I PR +H
Sbjct: 315 GFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDH 374
Query: 447 YIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNE 506
Y +V LLG +G L++AY + + SG+WGALL C V+ +T+L +++LF+ E
Sbjct: 375 YSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELE 434
Query: 507 PRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
PR G VMLSNIY++ G W D R R+ + G + G S+I G
Sbjct: 435 PRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHG 481
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 183/447 (40%), Gaps = 50/447 (11%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
LH +++S F +++ Y + A LFD+ P+R + WNS+I ++
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 85 FDEALSFYAKMLRTET--KPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ ++M+ +E +P+ T+ +I C + R +H
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y K ++ + K+F + ++LV N MI + G KGL FN R +G
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG-H 231
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
+PD T + ++ D ++ + QGIHGL + GF N + +AL+++YS+ + +
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSST 291
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
VF + PD +AW+A++ + + G D I L+V
Sbjct: 292 VFHEITSPDSMAWTAMLAAY----------------ATHGFGRDAIKHFELMV------- 328
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS-----YN 377
+G+ + + + L++ G V G FE M R + Y+
Sbjct: 329 ------------HYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYS 376
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
++ LG GL A+ L +EM ++P LL AC + KD Q +
Sbjct: 377 CMVDLLGRSGLLQDAYGLIKEM---PMEPSSGVWGALLGAC---RVYKDTQLGTKAAERL 430
Query: 438 FCIPPRT-EHYIHIVKLLGMAGELEEA 463
F + PR +Y+ + + +G ++A
Sbjct: 431 FELEPRDGRNYVMLSNIYSASGLWKDA 457
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 310 IASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR 369
++SL+ A + L +H V++ + + L+ YL+ G +F+ M
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 370 NRNIVSYNSVISGLGLHGLAAQAFKLFEEML--EKGLKPDESTLSGLLCACCHAGLVKDG 427
R++VS+NS+ISG G + F++ M+ E G +P+E T ++ AC + G ++G
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 428 QEI 430
+ I
Sbjct: 154 RCI 156
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/569 (26%), Positives = 263/569 (46%), Gaps = 70/569 (12%)
Query: 54 LISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG 113
+ SA +FD P+ WN+M+ ++++ EA++ + ++ ++ KPD++++ ++
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILST 79
Query: 114 CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIF---ERDL 170
C ++ R + Y K S A+KVF + ++
Sbjct: 80 CASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEV 139
Query: 171 VLC------------------------------NAMISGYSYCGFWGKGLQLFNGMREIG 200
C N MISG+++CG L LF M E
Sbjct: 140 TWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLE-S 198
Query: 201 KQQPDGFTLVGLISGL-MDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF----- 254
+ +PD +T L++ D S + G+ +H + LK+G+ +++++ Y++
Sbjct: 199 EFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDD 258
Query: 255 ---------------------KCM-----NSAYGVFIGLYQPDLVAWSALITGFLQCEDY 288
CM A VF + ++V W+ +ITG+ + D
Sbjct: 259 AMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDG 318
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
++AL F+ + +G +D ++L A + L + G IHG ++ G + V +AL
Sbjct: 319 EQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNAL 378
Query: 349 IDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
+++Y KCG + F ++ N+++VS+N+++ G+HGLA QA KL++ M+ G+KPD
Sbjct: 379 VNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDN 438
Query: 409 STLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVL 468
T GLL C H+GLV++G IF M+ ++ IP +H ++ + G G L EA +
Sbjct: 439 VTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLAT 498
Query: 469 S----LMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDG 524
+ + ++ W LL C H +TEL VS+ L EP + V+LSN+Y S G
Sbjct: 499 TYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTG 558
Query: 525 RWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
RW + + R +V G +K PG SWI G
Sbjct: 559 RWKEGEDVRREMVERGMKKTPGCSWIEVG 587
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 178/425 (41%), Gaps = 80/425 (18%)
Query: 150 SKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTL 209
+K ++ A +VF G+ E D V N M++ YS G + + LF +R +PD ++
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLR-FSDAKPDDYSF 73
Query: 210 VGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSR---------------- 253
++S + G+ I L ++SGF + V ++L++MY +
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 254 ------------FKCMN-----SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYR 296
F MN +A VF+ + + AW+ +I+G C + L ++
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 297 NLSVAGKKADPILIASLLVA-SAQLTDVRLGTEIHGYVLRHGLES-----NIIVS----- 345
+ + K D +SL+ A SA ++V G +H +L++G S N ++S
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 346 ---------------------SALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLG 384
+++ID +K G + VF +NIV++ ++I+G G
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 385 LHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRT 444
+G QA + F EM++ G+ D +L AC L+ G +M+ I
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-----KMIHGCLIHCGF 368
Query: 445 EHYIHI----VKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQ 500
+ Y ++ V L G+++EA + + D W +L VHG + A
Sbjct: 369 QGYAYVGNALVNLYAKCGDIKEA-DRAFGDIANKDLVSWNTMLFAFGVHGLADQA----L 423
Query: 501 QLFDN 505
+L+DN
Sbjct: 424 KLYDN 428
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 270/560 (48%), Gaps = 51/560 (9%)
Query: 1 MSVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALN--DDLISAY 58
M++ L L R+ T Q+H L ++ + +S++ K++ A++ D L A
Sbjct: 1 MTIAIHHCLSLLNSCKNLRALT-QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYAR 59
Query: 59 NLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTE-TKPDNFTYACLIRGCHEN 117
L P+ F++N+++R ++++ + +++ + +M+R PD+F++A +I+ EN
Sbjct: 60 RLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAV-EN 118
Query: 118 FDLDGLRI---LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCN 174
F LR +H Y V A KVF + + +LV N
Sbjct: 119 FR--SLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWN 176
Query: 175 AMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLK 234
A+I+ C F G + G REI + L+ ++++ G
Sbjct: 177 AVITA---C-FRGNDVA---GAREIFDKM--------LVRNHTSWNVMLAG--------- 212
Query: 235 SGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFF 294
Y + + SA +F + D V+WS +I G + ++ +
Sbjct: 213 ----------------YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLY 256
Query: 295 YRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLK 354
+R L AG + + + +L A +Q G +HG+V + G + V++ALIDMY +
Sbjct: 257 FRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSR 316
Query: 355 CGFVGLGILVFENMRN-RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSG 413
CG V + LVFE M+ R IVS+ S+I+GL +HG +A +LF EM G+ PD +
Sbjct: 317 CGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFIS 376
Query: 414 LLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQP 473
LL AC HAGL+++G++ F M + I P EHY +V L G +G+L++AY+F+ + P
Sbjct: 377 LLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIP 436
Query: 474 VDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTR 533
+ +W LL C HGN ELAE V Q+L + +P V+LSN YA+ G+W DV R
Sbjct: 437 PTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIR 496
Query: 534 DNIVNVGARKMPGLSWIGGG 553
+++ +K S + G
Sbjct: 497 KSMIVQRIKKTTAWSLVEVG 516
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 244/503 (48%), Gaps = 85/503 (16%)
Query: 54 LISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG 113
++ A+ LFD+ P+ F +N M+ + + F++A SF+ +M D ++ +I
Sbjct: 23 MMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMI-- 76
Query: 114 CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLC 173
T Y++ + +A ++F + E++ V
Sbjct: 77 ---------------------------------TGYARRGEMEKARELFYSMMEKNEVSW 103
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
NAMISGY CG K F V + G++ ++
Sbjct: 104 NAMISGYIECGDLEKASHFFK---------------VAPVRGVVAWT------------- 135
Query: 234 KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKAL 292
A++ Y + K + A +F + +LV W+A+I+G+++ + L
Sbjct: 136 ------------AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 183
Query: 293 FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMY 352
+R + G + + ++S L+ ++L+ ++LG +IH V + L +++ ++LI MY
Sbjct: 184 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY 243
Query: 353 LKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
KCG +G +FE M+ +++V++N++ISG HG A +A LF EM++ ++PD T
Sbjct: 244 CKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 303
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ 472
+L AC HAGLV G F M+ ++ + P+ +HY +V LLG AG+LEEA + S+
Sbjct: 304 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 363
Query: 473 PVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRT 532
+ ++G LL C VH N ELAE +++L + A V L+NIYAS RW+DV R
Sbjct: 364 RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARV 423
Query: 533 R-----DNIVNVGARKMPGLSWI 550
R N+V V K+PG SWI
Sbjct: 424 RKRMKESNVVKVERVKVPGYSWI 446
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 173/424 (40%), Gaps = 59/424 (13%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
++ ++SLL ++K QL I ++F +L Y N + A + F
Sbjct: 6 TITWNSLLIGISKDPSRMMEAHQLFDEIPEP----DTFSYNIMLSCYVRNVNFEKAQSFF 61
Query: 62 DKTPQRSIFLWNSMIRAFAKAHKFDEALS-FYAKMLRTETKPDNFTYACLIRGCHENFDL 120
D+ P + WN+MI +A+ + ++A FY+ M + E ++ +I G E DL
Sbjct: 62 DRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV-----SWNAMISGYIECGDL 116
Query: 121 DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI-FERDLVLCNAMISG 179
+ T Y K V A +F + ++LV NAMISG
Sbjct: 117 EKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISG 172
Query: 180 YSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDC 239
Y GL+LF M E G +P+ L + G + S L +G+ IH + KS
Sbjct: 173 YVENSRPEDGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN 231
Query: 240 NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
+ ++L++MY + + A+ +F + + D+VAW+A+I+G+ Q + KAL +R +
Sbjct: 232 DVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 291
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
+ D I ++L+A G V
Sbjct: 292 DNKIRPDWITFVAVLLACNH-----------------------------------AGLVN 316
Query: 360 LGILVFENM-RNRNIVS----YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGL 414
+G+ FE+M R+ + Y ++ LG G +A KL M +P + L
Sbjct: 317 IGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM---PFRPHAAVFGTL 373
Query: 415 LCAC 418
L AC
Sbjct: 374 LGAC 377
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/533 (27%), Positives = 255/533 (47%), Gaps = 6/533 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+Q+H L+++ + + ++ YA + + A+ F + + + WN++I F +
Sbjct: 66 EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQV 125
Query: 83 HKFDEALSFYAKM-LRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
A M ++ D T+A L+ + + L+ +H
Sbjct: 126 RDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITI 185
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIF-ERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
++Y+ VS+A +VF G+ +DL+ N+MI+G+S +LF M+
Sbjct: 186 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR-H 244
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC--MN 258
+ D +T GL+S G+ +HG+ +K G + +AL++MY +F M
Sbjct: 245 WVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTME 304
Query: 259 SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
A +F L DL++W+++ITGF Q + A+ F+ L + K D ++LL + +
Sbjct: 305 DALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 364
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR-NIVSYN 377
L ++LG +IH + G SN V S+LI MY KCG + F+ + ++ + V++N
Sbjct: 365 DLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 424
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
++I G HGL + LF +M + +K D T + +L AC H GL+++G E+ M
Sbjct: 425 AMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPV 484
Query: 438 FCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEI 497
+ I PR EHY V LLG AG + +A + S+ D + L C G E+A
Sbjct: 485 YKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQ 544
Query: 498 VSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V+ L + EP V LS++Y+ +W++ + + G +K+PG SWI
Sbjct: 545 VANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 597
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 142/260 (54%), Gaps = 3/260 (1%)
Query: 161 VFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFS 220
+F + +RD V N MISGY+ CG LF M+ G DG++ L+ G+
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSG-SDVDGYSFSRLLKGIASVK 60
Query: 221 LLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALIT 280
+G+ +HGL +K G++CN YVGS+LV+MY++ + + A+ F + +P+ V+W+ALI
Sbjct: 61 RFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIA 120
Query: 281 GFLQCEDYKKALFFYRNLSV-AGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLE 339
GF+Q D K A + + + A D A LL L ++H VL+ GL+
Sbjct: 121 GFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ 180
Query: 340 SNIIVSSALIDMYLKCGFVGLGILVFENM-RNRNIVSYNSVISGLGLHGLAAQAFKLFEE 398
I + +A+I Y CG V VF+ + +++++S+NS+I+G H L AF+LF +
Sbjct: 181 HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQ 240
Query: 399 MLEKGLKPDESTLSGLLCAC 418
M ++ D T +GLL AC
Sbjct: 241 MQRHWVETDIYTYTGLLSAC 260
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 173/379 (45%), Gaps = 13/379 (3%)
Query: 60 LFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFD 119
LFD+ P+R WN+MI + K ++A + M R+ + D ++++ L++G
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 120 LDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISG 179
D +H Y+K V +A + F I E + V NA+I+G
Sbjct: 62 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 121
Query: 180 YSY-----CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLK 234
+ FW GL M D T L++ L D + + +H LK
Sbjct: 122 FVQVRDIKTAFWLLGL-----MEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLK 176
Query: 235 SGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKALF 293
G + +A+++ Y+ ++ A VF GL DL++W+++I GF + E + A
Sbjct: 177 LGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFE 236
Query: 294 FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYL 353
+ + + D LL A + G +HG V++ GLE ++ALI MY+
Sbjct: 237 LFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYI 296
Query: 354 K--CGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTL 411
+ G + + +FE++++++++S+NS+I+G GL+ A K F + +K D+
Sbjct: 297 QFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAF 356
Query: 412 SGLLCACCHAGLVKDGQEI 430
S LL +C ++ GQ+I
Sbjct: 357 SALLRSCSDLATLQLGQQI 375
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 239/446 (53%), Gaps = 16/446 (3%)
Query: 100 TKPDNFTYACLIRGCHENFDLD-GLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA 158
T+P+ F A L+ C+ +D G+R+ H Y+ + A
Sbjct: 90 TEPEIF--ASLLETCYSLRAIDHGVRV-HHLIPPYLLRNNLGISSKLVRLYASCGYAEVA 146
Query: 159 SKVFSGIFERD--LVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGL 216
+VF + +RD N++ISGY+ G + + L+ M E G + PD FT ++
Sbjct: 147 HEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK-PDRFTFPRVLKAC 205
Query: 217 MDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWS 276
+ IG+ IH +K GF + YV +ALV MY++ + A VF + D V+W+
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 277 ALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRH 336
+++TG+L +AL +R + G + D + I+S+L A++ + G ++HG+V+R
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRR 322
Query: 337 GLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLF 396
G+E + V++ALI +Y K G +G +F+ M R+ VS+N++IS H + K F
Sbjct: 323 GMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYF 379
Query: 397 EEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGM 456
E+M KPD T +L C + G+V+DG+ +F M E+ I P+ EHY +V L G
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 457 AGELEEAYNFVLSLMQPVDSG--IWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKV 514
AG +EEAY+ ++ M +++G +WGALL C +HGNT++ E+ +Q+LF+ EP
Sbjct: 440 AGMMEEAYSMIVQEMG-LEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFE 498
Query: 515 MLSNIYASDGRWDDVKRTRDNIVNVG 540
+L IY+ R +DV+R R +V+ G
Sbjct: 499 LLIRIYSKAKRAEDVERVRQMMVDRG 524
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 203/444 (45%), Gaps = 28/444 (6%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
F+SLL E S + ++H LI L + ++K++R YA A+ +FD+
Sbjct: 95 FASLL-ETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 65 PQR--SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDG 122
+R S F WNS+I +A+ ++++A++ Y +M KPD FT+ +++ C +
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 123 LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
+H Y+K + +A VF I +D V N+M++GY +
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
G + L +F M + G +PD + +++ ++ F G+ +HG ++ G +
Sbjct: 274 HGLLHEALDIFRLMVQNGI-EPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWELS 329
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAG 302
V +AL+ +YS+ + A +F + + D V+W+A+I+ + + L ++ + A
Sbjct: 330 VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHRAN 386
Query: 303 KKADPILIASLLVASAQLTDVRLGTEIHGYVLR-HGLESNIIVSSALIDMYLKCGFV--G 359
K D I S+L A V G + + + +G++ + + ++++Y + G +
Sbjct: 387 AKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEA 446
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHG------LAAQAFKLFEEMLEKGLKPD-ESTLS 412
++V E + +++ LHG +AAQ +LFE L+PD E
Sbjct: 447 YSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQ--RLFE------LEPDNEHNFE 498
Query: 413 GLLCACCHAGLVKDGQEIFRRMMD 436
L+ A +D + + + M+D
Sbjct: 499 LLIRIYSKAKRAEDVERVRQMMVD 522
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 251/522 (48%), Gaps = 37/522 (7%)
Query: 63 KTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDG 122
+TP S+ ++N M+++ A F + L+ + ++ PDNFT +++ +
Sbjct: 7 QTP--SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 123 LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
+H Y+ + KVF + +RD+V N +IS Y
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
G + + +F M + + D T+V +S L IG+ I+ + + F+ +
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVR 183
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQP-------------------------------D 271
+G+ALV+M+ + C++ A VF + D
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 272 LVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHG 331
+V W+A++ G++Q + +AL +R + AG + D ++ SLL AQ + G IHG
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 332 YVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQ 391
Y+ + + + +V +AL+DMY KCG + + VF ++ R+ S+ S+I GL ++G++ +
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 392 AFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIV 451
A L+ EM G++ D T +L AC H G V +G++IF M + + P++EH ++
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 452 KLLGMAGELEEAYNFVLSLMQPVDSG---IWGALLSCCDVHGNTELAEIVSQQLFDNEPR 508
LL AG L+EA + + D ++ +LLS +GN ++AE V+++L E
Sbjct: 424 DLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVS 483
Query: 509 KGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ +L+++YAS RW+DV R + ++G RK PG S I
Sbjct: 484 DSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSI 525
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 11/265 (4%)
Query: 267 LYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
L P L+ ++ ++ + + K L + L G D + +L + +L V G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 327 TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLH 386
++HGY ++ GLE + VS++L+ MY G + + VF+ M R++VS+N +IS +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 387 GLAAQAFKLFEEM-LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTE 445
G A +F+ M E LK DE T+ L AC ++ G+ I+R ++ EF + R
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 446 HYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDN 505
+ +V + G L++A V M+ + W +++ G + A + LF+
Sbjct: 186 N--ALVDMFCKCGCLDKA-RAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARV----LFER 238
Query: 506 EPRKGA--YKVMLSNIYASDGRWDD 528
P K + M+ N Y R+D+
Sbjct: 239 SPVKDVVLWTAMM-NGYVQFNRFDE 262
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 2/202 (0%)
Query: 60 LFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFD 119
LF+++P + + LW +M+ + + ++FDEAL + M +PDNF L+ GC +
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Query: 120 LDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISG 179
L+ + +H Y+K + A +VF I ERD ++I G
Sbjct: 295 LEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYG 354
Query: 180 YSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI-HGLCLKSGFD 238
+ G G+ L L+ M +G + D T V +++ + G+ I H + +
Sbjct: 355 LAMNGMSGRALDLYYEMENVG-VRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQ 413
Query: 239 CNAYVGSALVNMYSRFKCMNSA 260
+ S L+++ R ++ A
Sbjct: 414 PKSEHCSCLIDLLCRAGLLDEA 435
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 274/534 (51%), Gaps = 15/534 (2%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ +H I R + +L Y+ DL+S+ +F+K +++ W +MI ++ +
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGC------HENFDLDGLRILHXXXXXXXXX 136
++AL +++M+++ +P+ T ++ C E + G +
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 137 XXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM 196
Y++ +S+ V + +R++V N++IS Y++ G + L LF M
Sbjct: 342 SLALVEL-----YAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 197 REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC 256
+ +PD FTL IS + L+ +G+ IHG +++ + +V ++L++MYS+
Sbjct: 397 V-TQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGS 454
Query: 257 MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
++SA VF + +V W++++ GF Q + +A+ + + + + + + +++ A
Sbjct: 455 VDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQA 514
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
+ + + G +H ++ GL+ ++ +ALIDMY KCG + VF M +R+IVS+
Sbjct: 515 CSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSW 573
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
+S+I+ G+HG A F +M+E G KP+E +L AC H+G V++G+ F +M
Sbjct: 574 SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN-LMK 632
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
F + P +EH+ + LL +G+L+EAY + + D+ +WG+L++ C +H ++ +
Sbjct: 633 SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIK 692
Query: 497 IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ L D Y +LSNIYA +G W++ +R R + + +K+PG S I
Sbjct: 693 AIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAI 746
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 210/412 (50%), Gaps = 8/412 (1%)
Query: 24 QLHA-LILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
QLHA L++ L + TK++ YA S+ +F+ P F++ +I+
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWC 78
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGC---HENFDLDGLRILHXXXXXXXXXXXX 139
H D A+ Y +++ T+ F + ++R C E+ + G +H
Sbjct: 79 HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGK--VHGRIIKGGVDDDA 136
Query: 140 XXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREI 199
Y + ++S+A KVF G+ RDLV + ++S G K L++F M +
Sbjct: 137 VIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDD 196
Query: 200 GKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
G +PD T++ ++ G + L I + +HG + FD + + ++L+ MYS+ + S
Sbjct: 197 G-VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLS 255
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
+ +F + + + V+W+A+I+ + + E +KAL + + +G + + + + S+L +
Sbjct: 256 SERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGL 315
Query: 320 LTDVRLGTEIHGYVLRHGLESNI-IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNS 378
+ +R G +HG+ +R L+ N +S AL+++Y +CG + V + +RNIV++NS
Sbjct: 316 IGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNS 375
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+IS G+ QA LF +M+ + +KPD TL+ + AC +AGLV G++I
Sbjct: 376 LISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 208/432 (48%), Gaps = 3/432 (0%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
F S+L+ S + S ++H I++ + ++ T +L Y +L A +FD
Sbjct: 103 FPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM 162
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
P R + W++++ + + + +AL + M+ +PD T ++ GC E L R
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
+H T YSK + + ++F I +++ V AMIS Y+
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCN-AYV 243
F K L+ F+ M + G +P+ TL ++S L+ G+ +HG ++ D N +
Sbjct: 283 FSEKALRSFSEMIKSGI-EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
ALV +Y+ ++ V + ++VAW++LI+ + +AL +R +
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
K D +AS + A V LG +IHG+V+R + S+ V ++LIDMY K G V
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSAST 460
Query: 364 VFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGL 423
VF +++R++V++NS++ G +G + +A LF+ M L+ +E T ++ AC G
Sbjct: 461 VFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGS 520
Query: 424 VKDGQEIFRRMM 435
++ G+ + +++
Sbjct: 521 LEKGKWVHHKLI 532
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 142/267 (53%), Gaps = 9/267 (3%)
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITG 281
L +G +HG +K G D +A + ++L+ MY + ++ A VF G+ DLVAWS L++
Sbjct: 117 LSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS 176
Query: 282 FLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN 341
L+ + KAL ++ + G + D + + S++ A+L +R+ +HG + R + +
Sbjct: 177 CLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLE 401
+ ++L+ MY KCG + +FE + +N VS+ ++IS + +A + F EM++
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK 296
Query: 402 KGLKPDESTLSGLLCACCHAGLVKDGQEI----FRRMMDEFCIPPRTEHYIHIVKLLGMA 457
G++P+ TL +L +C GL+++G+ + RR +D P + +V+L
Sbjct: 297 SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD----PNYESLSLALVELYAEC 352
Query: 458 GELEEAYNFVLSLMQPVDSGIWGALLS 484
G+L + VL ++ + W +L+S
Sbjct: 353 GKLSDCET-VLRVVSDRNIVAWNSLIS 378
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 251/500 (50%), Gaps = 48/500 (9%)
Query: 57 AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE 116
A+ LFD+ P+ + + N ++R A++ K ++ +S Y +M + PD +T+ +++ C +
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 117 -NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNA 175
+ +G H ++ + AS++F + V ++
Sbjct: 125 LEWRSNGF-AFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSS 183
Query: 176 MISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKS 235
M SGY+ G + ++LF+ M D +I+G CLK
Sbjct: 184 MTSGYAKRGKIDEAMRLFDEM-----PYKDQVAWNVMITG----------------CLKC 222
Query: 236 GFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFY 295
K M+SA +F + D+V W+A+I+G++ C K+AL +
Sbjct: 223 -------------------KEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIF 263
Query: 296 RNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG-LESNIIVSS----ALID 350
+ + AG+ D + I SLL A A L D+ G +H Y+L + S+I V + ALID
Sbjct: 264 KEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALID 323
Query: 351 MYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDEST 410
MY KCG + I VF +++R++ ++N++I GL LH A + ++FEEM + P+E T
Sbjct: 324 MYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVT 382
Query: 411 LSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL 470
G++ AC H+G V +G++ F M D + I P +HY +V +LG AG+LEEA+ FV S+
Sbjct: 383 FIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM 442
Query: 471 MQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVK 530
++ +W LL C ++GN EL + +++L + V+LSNIYAS G+WD V+
Sbjct: 443 KIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQ 502
Query: 531 RTRDNIVNVGARKMPGLSWI 550
+ R + +K G+S I
Sbjct: 503 KVRKMFDDTRVKKPTGVSLI 522
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
++ SA LFD+ ++ + WN+MI + EAL + +M PD T L+
Sbjct: 224 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 113 GCHENFDLD-GLR----ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE 167
C DL+ G R IL Y+K + A +VF G+ +
Sbjct: 284 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 343
Query: 168 RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLI 213
RDL N +I G + G +++F M+ + K P+ T +G+I
Sbjct: 344 RDLSTWNTLIVGLALHHAEG-SIEMFEEMQRL-KVWPNEVTFIGVI 387
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 216/409 (52%), Gaps = 6/409 (1%)
Query: 148 AYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGF 207
+Y K ++ A K+F + E ++V ++ISGY+ G L +F M E P+ +
Sbjct: 73 SYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEY 132
Query: 208 TLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL 267
T + + IG+ IH SG N V S+LV+MY + + +A VF +
Sbjct: 133 TFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSM 192
Query: 268 --YQPDLVAWSALITGFLQCEDYKKALFFYR--NLSVAGKKADPILIASLLVASAQLTDV 323
Y ++V+W+++IT + Q +A+ +R N ++ +A+ ++AS++ A + L +
Sbjct: 193 IGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRL 252
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
+ G HG V R G ESN +V+++L+DMY KCG + +F +R +++SY S+I
Sbjct: 253 QWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAK 312
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
HGL A KLF+EM+ + P+ TL G+L AC H+GLV +G E M +++ + P
Sbjct: 313 AKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPD 372
Query: 444 TEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG--IWGALLSCCDVHGNTELAEIVSQQ 501
+ HY +V +LG G ++EAY ++ + G +WGALLS +HG E+ S++
Sbjct: 373 SRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKR 432
Query: 502 LFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
L + + + + LSN YA G W+D + R + G K SWI
Sbjct: 433 LIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWI 481
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 9/208 (4%)
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCED 287
+H L LK GF + + + LV Y + K +N+A +F + +P++V+W+++I+G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 288 YKKALFFYRNLSVAGKKADP--ILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVS 345
+ AL ++ + + P AS+ A + L + R+G IH + GL NI+VS
Sbjct: 111 PQNALSMFQKMH-EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 346 SALIDMYLKCGFVGLGILVFENM--RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
S+L+DMY KC V VF++M RN+VS+ S+I+ + +A +LF
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS-FNAA 228
Query: 404 LKPDEST---LSGLLCACCHAGLVKDGQ 428
L D + L+ ++ AC G ++ G+
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGK 256
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 8 LLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQR 67
L+ +L++S + T LH L L+ + ++F ++ Y ++ +A LFD+ +
Sbjct: 35 LVHKLSESTNA-AFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEP 93
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDN-FTYACLIRGCHENFDLDGLRIL 126
++ W S+I + K ALS + KM P N +T+A + + C + + +
Sbjct: 94 NVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNI 153
Query: 127 HXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI--FERDLVLCNAMISGYSYCG 184
H Y K + V A +VF + + R++V +MI+ Y+
Sbjct: 154 HARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNA 213
Query: 185 FWGKGLQLFNGMR-EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYV 243
+ ++LF + + + F L +IS L G+ HGL + G++ N V
Sbjct: 214 RGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVV 273
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALI 279
++L++MY++ ++ A +F+ + +++++++I
Sbjct: 274 ATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 206/383 (53%), Gaps = 35/383 (9%)
Query: 203 QPDGFTLVGLISGLMDFSL--LGIGQGIHGLCLKSGFDCN-AYVGSALVNMYS---RFK- 255
+P+ T + L+SG DF+ +G +HG K G D N VG+A++ MYS RFK
Sbjct: 68 EPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKK 127
Query: 256 ---------------------------CMNSAYGVFIGLYQPDLVAWSALITGFLQCEDY 288
+++A +F + + DL++W+A+I GF++
Sbjct: 128 ARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQ 187
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
++AL ++R + ++G K D + I + L A L + G +H YVL ++N+ VS++L
Sbjct: 188 EEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSL 247
Query: 349 IDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
ID+Y +CG V VF NM R +VS+NSVI G +G A ++ F +M EKG KPD
Sbjct: 248 IDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDA 307
Query: 409 STLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVL 468
T +G L AC H GLV++G F+ M ++ I PR EHY +V L AG LE+A V
Sbjct: 308 VTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQ 367
Query: 469 SLMQPVDSGIWGALLSCCDVHGNT-ELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWD 527
S+ + + G+LL+ C HGN LAE + + L D + + V+LSN+YA+DG+W+
Sbjct: 368 SMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWE 427
Query: 528 DVKRTRDNIVNVGARKMPGLSWI 550
+ R + +G +K PG S I
Sbjct: 428 GASKMRRKMKGLGLKKQPGFSSI 450
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 116/279 (41%), Gaps = 44/279 (15%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFT 208
Y + V A+K+F + ERDL+ AMI+G+ G+ + L F M +I +PD
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM-QISGVKPDYVA 208
Query: 209 LVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLY 268
++ ++ + L G +H L F N V ++L+++Y R C+ A VF +
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 269 QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTE 328
+ +V+W+++I GF + ++L ++R + G K D + L A + +
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHV-------- 320
Query: 329 IHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-----NRNIVSYNSVISGL 383
G V G+ F+ M+ + I Y ++
Sbjct: 321 ---------------------------GLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLY 353
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAG 422
G A KL + M +KP+E + LL AC + G
Sbjct: 354 SRAGRLEDALKLVQSM---PMKPNEVVIGSLLAACSNHG 389
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 7/181 (3%)
Query: 48 YALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTY 107
Y + + +A +FDK P+R + W +MI F K +EAL ++ +M + KPD Y
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD---Y 206
Query: 108 ACLIRGCHENFDLDGLRI---LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSG 164
+I + +L L +H Y + V A +VF
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 165 IFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGI 224
+ +R +V N++I G++ G + L F M+E G +PD T G ++ L+
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG-FKPDAVTFTGALTACSHVGLVEE 325
Query: 225 G 225
G
Sbjct: 326 G 326
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 227/495 (45%), Gaps = 43/495 (8%)
Query: 57 AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE 116
A + + + ++F++N++ + F +L Y +MLR P ++TY+ L++
Sbjct: 79 AVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA--S 136
Query: 117 NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAM 176
+F L YS + EA KVF + ERD + M
Sbjct: 137 SFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTM 196
Query: 177 ISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG 236
+S Y L N M E
Sbjct: 197 VSAYRRVLDMDSANSLANQMSE-------------------------------------- 218
Query: 237 FDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYR 296
N + L+N Y + A +F + D+++W+ +I G+ Q + Y++A+ +
Sbjct: 219 --KNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFY 276
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG 356
+ G D + +++++ A A L + +G E+H Y L++G ++ + SAL+DMY KCG
Sbjct: 277 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 336
Query: 357 FVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLC 416
+ +LVF N+ +N+ +NS+I GL HG A +A K+F +M + +KP+ T +
Sbjct: 337 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 396
Query: 417 ACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDS 476
AC HAGLV +G+ I+R M+D++ I EHY +V L AG + EA + ++ ++
Sbjct: 397 ACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNA 456
Query: 477 GIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNI 536
IWGALL C +H N +AEI +L EP Y +L ++YA RW DV R +
Sbjct: 457 VIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRM 516
Query: 537 VNVGARKM-PGLSWI 550
+G K+ PG S I
Sbjct: 517 RELGIEKICPGTSSI 531
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
+L A +LF++ P + I W +MI+ +++ ++ EA++ + KM+ PD T + +I
Sbjct: 236 NLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVIS 295
Query: 113 GCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVL 172
C L+ + +H YSK + A VF + +++L
Sbjct: 296 ACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFC 355
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLC 232
N++I G + GF + L++F M E+ +P+ T V + + L+ G+ I+
Sbjct: 356 WNSIIEGLAAHGFAQEALKMFAKM-EMESVKPNAVTFVSVFTACTHAGLVDEGRRIY--- 411
Query: 233 LKSGFDCNAYVGSA-----LVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALITG 281
+S D + V + +V+++S+ + A + + ++P+ V W AL+ G
Sbjct: 412 -RSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 465
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 104/261 (39%), Gaps = 66/261 (25%)
Query: 233 LKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL 292
+K+ + + + + + + FK ++ A + +P++ ++AL GF+ C ++L
Sbjct: 52 IKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSL 111
Query: 293 FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMY 352
Y + +SL+ AS+ + R G + ++ + G ++ + + LID Y
Sbjct: 112 ELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFY 169
Query: 353 LKCGFVGLGILVFENMRNRNIVSYNSVISG------------------------------ 382
G + VF+ M R+ +++ +++S
Sbjct: 170 SATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLIN 229
Query: 383 --LGLHGLAAQAFKLFEEM-------------------------------LEKGLKPDES 409
+GL L QA LF +M +E+G+ PDE
Sbjct: 230 GYMGLGNL-EQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 288
Query: 410 TLSGLLCACCHAGLVKDGQEI 430
T+S ++ AC H G+++ G+E+
Sbjct: 289 TMSTVISACAHLGVLEIGKEV 309
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K++H L++ + + + ++ Y+ L A +F P++++F WNS+I A A
Sbjct: 307 KEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA-A 365
Query: 83 HKF-DEALSFYAKMLRTETKPDNFTYACLIRGC-HENFDLDGLRILHXXXXXXXXXXXXX 140
H F EAL +AKM KP+ T+ + C H +G RI
Sbjct: 366 HGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 425
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGI-FERDLVLCNAMISG 179
+SK + EA ++ + FE + V+ A++ G
Sbjct: 426 HYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 465
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 241/508 (47%), Gaps = 2/508 (0%)
Query: 44 ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPD 103
+L+ Y L A LFD+ + + +MI A+A+ D+A+ ++ ML + KP
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 104 NFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFS 163
+ Y L++ LD R +H Y K + A +VF
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 164 GIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLG 223
+ + V C ++ GY+ G L+LF + G + D F ++ L
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEW-DSFVFSVVLKACASLEELN 302
Query: 224 IGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
+G+ IH K G + VG+ LV+ Y + SA F + +P+ V+WSA+I+G+
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362
Query: 284 QCEDYKKALFFYRNL-SVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
Q +++A+ +++L S + S+ A + L D +G ++H ++ L +
Sbjct: 363 QMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ 422
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
SALI MY KCG + VFE+M N +IV++ + ISG +G A++A +LFE+M+
Sbjct: 423 YGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC 482
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
G+KP+ T +L AC HAGLV+ G+ M+ ++ + P +HY ++ + +G L+E
Sbjct: 483 GMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 542
Query: 463 AYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYAS 522
A F+ ++ D+ W LS C H N EL EI ++L +P A V+ N+Y
Sbjct: 543 ALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTW 602
Query: 523 DGRWDDVKRTRDNIVNVGARKMPGLSWI 550
G+W++ + +K SWI
Sbjct: 603 AGKWEEAAEMMKLMNERMLKKELSCSWI 630
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 182/424 (42%), Gaps = 4/424 (0%)
Query: 73 NSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXX 132
N + + +K K +EA F +M + +++Y CL C E L R+LH
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 133 XXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQL 192
Y + + +A K+F + E + V MIS Y+ G K + L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 193 FNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYS 252
F+GM G + P L+ L++ L G+ IH +++G N + + +VNMY
Sbjct: 172 FSGMLASGDKPPSSM-YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230
Query: 253 RFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIAS 312
+ + A VF + VA + L+ G+ Q + AL + +L G + D + +
Sbjct: 231 KCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSV 290
Query: 313 LLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRN 372
+L A A L ++ LG +IH V + GLES + V + L+D Y+KC F+ +R N
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 373 IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDES-TLSGLLCACCHAGLVKDGQEIF 431
VS++++ISG +A K F+ + K S T + + AC G ++
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 432 RRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGN 491
+ I + ++ + G L++A N V M D W A +S +GN
Sbjct: 411 ADAIKRSLIGSQYGESA-LITMYSKCGCLDDA-NEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 492 TELA 495
A
Sbjct: 469 ASEA 472
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 157/366 (42%), Gaps = 2/366 (0%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+Q+HA ++R+ L + T I+ Y L+ A +FD+ + ++ + +A
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQA 263
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ +AL + ++ + D+F ++ +++ C +L+ + +H
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y K S A + F I E + V +A+ISGY + + ++ F +R
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
+ FT + + IG +H +K + Y SAL+ MYS+ C++ A
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
VF + PD+VAW+A I+G + +AL + + G K + + ++L A +
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 323 VRLGTEIHGYVLR-HGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-NRNIVSYNSVI 380
V G +LR + + I +ID+Y + G + + +NM + +S+ +
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 381 SGLGLH 386
SG H
Sbjct: 564 SGCWTH 569
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 250/524 (47%), Gaps = 51/524 (9%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
LH +++ L+ F + + FY+ + + AY F + +F W S+I + A++
Sbjct: 252 LHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGD 311
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
+E+ + +M PD +CLI +L + ++
Sbjct: 312 MEESFDMFWEMQNKGMHPDGVVISCLIN------ELGKMMLV------------------ 347
Query: 145 XXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
K F G +CN+++S Y +LF + E G ++
Sbjct: 348 ------------PQGKAFHG------TVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEA 389
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF 264
L G + + +G+ +H +K+ D V ++L+++Y + + A+ +F
Sbjct: 390 WNTMLKG-------YGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF 442
Query: 265 IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVR 324
+++ W+A+I ++ CE +KA+ + + K I + +LL+A +
Sbjct: 443 CEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLE 501
Query: 325 LGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLG 384
G IH Y+ E N+ +S+ALIDMY KCG + +F+ ++ V +N +ISG G
Sbjct: 502 RGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYG 561
Query: 385 LHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRT 444
+HG A LF++M E +KP T LL AC HAGLV+ G+++F + M ++ + P
Sbjct: 562 MHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLK-MHQYDVKPNL 620
Query: 445 EHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFD 504
+HY +V LL +G LEEA + V+S+ D IWG LLS C HG E+ ++++
Sbjct: 621 KHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVA 680
Query: 505 NEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLS 548
++P+ Y +ML+N+Y++ G+W++ +R R+ + G K G S
Sbjct: 681 SDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 724
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/564 (23%), Positives = 235/564 (41%), Gaps = 83/564 (14%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
++ +ALI+ LS F A+K++ YA + +F +R IFLWNS+I+A
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGC------HENFDLDGLRILHXXXXXXXXX 136
+ +L F+ ML + PD+FT ++ C H + GL + H
Sbjct: 104 GDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 137 XXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM 196
YSK + +A VF + +RD+V A+ISG+ G GL M
Sbjct: 164 GASFVYF-----YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 197 REIGKQ--QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF 254
G +P+ TL + L G+ +HG +K+G + +V S++ + YS+
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 255 KCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLL 314
+ AY F L D+ +W+++I + D +++ + + G D ++I+ L+
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 315 VASAQLTDVRLGTEIHG------------------------------------------- 331
++ V G HG
Sbjct: 339 NELGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYG 398
Query: 332 ----------YVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVIS 381
YV++ L+ I V ++LID+Y K G + + +F + N++++N++I+
Sbjct: 399 AVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIA 457
Query: 382 GLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
+ +A LF+ M+ + KP TL LL AC + G ++ GQ I R + +
Sbjct: 458 SYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITE----- 512
Query: 442 PRTEHYIH------IVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
TEH ++ ++ + G LE++ + Q D+ W ++S +HG+ E A
Sbjct: 513 --TEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK-DAVCWNVMISGYGMHGDVESA 569
Query: 496 EIVSQQL--FDNEPRKGAYKVMLS 517
+ Q+ D +P + +LS
Sbjct: 570 IALFDQMEESDVKPTGPTFLALLS 593
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 152/319 (47%), Gaps = 5/319 (1%)
Query: 114 CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLC 173
C ++ L+ LR + ++Y+ + + +S+VF + RD+ L
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
N++I + G + + L F M G Q PD FT ++S + +G +HGL L
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSG-QSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 234 K-SGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL 292
K GFD N VG++ V YS+ + A VF + D+VAW+A+I+G +Q + + L
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 293 FFYRNLSVAGK---KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALI 349
+ + AG K +P + A + L ++ G +HG+ +++GL S+ V S++
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMF 272
Query: 350 DMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDES 409
Y K G L F + + ++ S+ S+I+ L G ++F +F EM KG+ PD
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 410 TLSGLLCACCHAGLVKDGQ 428
+S L+ LV G+
Sbjct: 333 VISCLINELGKMMLVPQGK 351
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 248/534 (46%), Gaps = 12/534 (2%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
QL + ++++ L + + Y+ + A +FD+ + + WNS++ ++
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 84 KFD-EALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
F EA+ + M+R + D+ ++ +I C DL R +H
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
+ YSK + VF + ER++V MIS + +F MR G
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDG-V 368
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
P+ T VGLI+ + + G IHGLC+K+GF VG++ + +Y++F+ + A
Sbjct: 369 YPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKK 428
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK-ADPILIASLL--VASAQ 319
F + ++++W+A+I+GF Q +AL + LS A + + S+L +A A+
Sbjct: 429 AFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAE 486
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
V+ G H ++L+ GL S +VSSAL+DMY K G + VF M +N + S+
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSI 546
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
IS HG LF +M+++ + PD T +L AC G+V G EIF M++ +
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYN 606
Query: 440 IPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVS 499
+ P EHY +V +LG AG L+EA + + + ++L C +HGN ++ V+
Sbjct: 607 LEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVA 666
Query: 500 QQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
+ + +P V + NIYA WD R + K G SWI G
Sbjct: 667 ELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVG 720
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 4/207 (1%)
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
G IHG SGF V +A++ MY + ++A +F L PD+V+W+ +++GF
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF-- 152
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIV 344
+D + AL F + AG D ++ L LG ++ V++ GLES+++V
Sbjct: 153 -DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVV 211
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHG-LAAQAFKLFEEMLEKG 403
++ I MY + G VF+ M ++++S+NS++SGL G +A +F +M+ +G
Sbjct: 212 GNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG 271
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEI 430
++ D + + ++ CCH +K ++I
Sbjct: 272 VELDHVSFTSVITTCCHETDLKLARQI 298
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 10/283 (3%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFT 208
Y K A +F + + D+V N ++SG+ L M+ G D FT
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAG-VVFDAFT 176
Query: 209 LVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLY 268
+S + +G + +K+G + + VG++ + MYSR A VF +
Sbjct: 177 YSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS 236
Query: 269 QPDLVAWSALITGFLQCEDYK-KALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGT 327
D+++W++L++G Q + +A+ +R++ G + D + S++ TD++L
Sbjct: 237 FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLAR 296
Query: 328 EIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHG 387
+IHG ++ G ES + V + L+ Y KCG + VF M RN+VS+ ++IS
Sbjct: 297 QIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----S 351
Query: 388 LAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
A +F M G+ P+E T GL+ A +K+G +I
Sbjct: 352 NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 294 FYRNLSVA--GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDM 351
F NL + G+ D + + L A D++ G +IHG+ G S + VS+A++ M
Sbjct: 63 FKENLQLGYFGRHMDEVTLC--LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGM 120
Query: 352 YLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTL 411
Y K G + +FEN+ + ++VS+N+++SG + + A M G+ D T
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTY 177
Query: 412 SGLLCAC 418
S L C
Sbjct: 178 STALSFC 184
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 53/99 (53%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
++ HA +L+ L+ ++ +L YA ++ + +F++ Q++ F+W S+I A++
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLD 121
F+ ++ + KM++ PD T+ ++ C+ +D
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVD 592
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/573 (27%), Positives = 258/573 (45%), Gaps = 65/573 (11%)
Query: 29 ILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEA 88
+ R H +S ++ Y + L A LFD P+RS + ++I+ +A+ +++ EA
Sbjct: 352 VFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA 411
Query: 89 LSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTA 148
+ + +M + T A +I C + R+L
Sbjct: 412 MELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHM 471
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE---------- 198
Y + +A K+F + ER+LV N M++GYS G + +LF+ + E
Sbjct: 472 YCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 531
Query: 199 ---IGKQQ-----------------PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFD 238
+ K Q P +V L+S G +HG +K GFD
Sbjct: 532 DGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 591
Query: 239 CNAYVGSALVNMYS----------RFKC---------------------MNSAYGVFIGL 267
C ++ + +++ Y+ +F+ + A VF
Sbjct: 592 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 651
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYRNL-SVAGKKADPILIASLLVASAQLTDVRLG 326
+ D+ +W+A+I+G+ Q + AL +R + S + K D I + S+ A + L + G
Sbjct: 652 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 711
Query: 327 TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF---ENMRNRNIVSYNSVISGL 383
H Y+ + N +++A+IDMY KCG + + +F +N+ + I +N++I G
Sbjct: 712 KRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGS 771
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
HG A A L+ ++ +KP+ T G+L ACCHAGLV+ G+ F M + I P
Sbjct: 772 ATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD 831
Query: 444 TEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLF 503
+HY +V LLG AG LEEA + + D IWG LLS HGN E+AE+ + +L
Sbjct: 832 IKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELA 891
Query: 504 DNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNI 536
+P G KVMLSN+YA GRW+DV R+ +
Sbjct: 892 AIDPSHGGCKVMLSNVYADAGRWEDVALVREEM 924
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 155/432 (35%), Gaps = 67/432 (15%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ L +L ++ L F +T +L Y L L A LFD+ P+R++ WN M+ ++KA
Sbjct: 447 RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKA 506
Query: 83 -------------------------------HKFDEALSFYAKMLRTETKPDNFTYACLI 111
++ DEAL +Y +MLR KP L+
Sbjct: 507 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 566
Query: 112 RGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLV 171
+ LH Y+ + + A + F + +
Sbjct: 567 SASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIA 626
Query: 172 LCNAMISGYSYCGF------------------WGK-------------GLQLFNGMREIG 200
NA+I+G+ G W L LF M
Sbjct: 627 SRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS 686
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
+ +PD T+V + S + L G+ H S N + +A+++MY++ + +A
Sbjct: 687 QVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETA 746
Query: 261 YGVF---IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVAS 317
+F + + W+A+I G K AL Y +L K + I +L A
Sbjct: 747 LNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 806
Query: 318 AQLTDVRLG-TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR-NIVS 375
V LG T HG+E +I ++D+ K G + + + M + +++
Sbjct: 807 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 866
Query: 376 YNSVISGLGLHG 387
+ ++S HG
Sbjct: 867 WGMLLSASRTHG 878
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 31/148 (20%)
Query: 310 IASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG---------- 359
+ S L + A DV G +IH VL+ GL+SN + +++++MY KC +
Sbjct: 298 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 357
Query: 360 ------LGILV---------------FENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEE 398
I+V F+ M R+ VSY ++I G + ++A +LF E
Sbjct: 358 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 417
Query: 399 MLEKGLKPDESTLSGLLCACCHAGLVKD 426
M G+ +E TL+ ++ AC H G + D
Sbjct: 418 MRNLGIMLNEVTLATVISACSHLGGIWD 445
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 94/242 (38%), Gaps = 36/242 (14%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDL--------------ISAYN------ 59
S+ QLH I++ F I+ FYA+++D+ I++ N
Sbjct: 576 SKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGF 635
Query: 60 -----------LFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKML-RTETKPDNFTY 107
+FD+T + IF WN+MI +A++ AL + +M+ ++ KPD T
Sbjct: 636 VKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITM 695
Query: 108 ACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVF---SG 164
+ L+ + H Y+K + A +F
Sbjct: 696 VSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKN 755
Query: 165 IFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGI 224
I + NA+I G + G L L++ ++ + +P+ T VG++S L+ +
Sbjct: 756 ISSSTISPWNAIICGSATHGHAKLALDLYSDLQSL-PIKPNSITFVGVLSACCHAGLVEL 814
Query: 225 GQ 226
G+
Sbjct: 815 GK 816
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/553 (26%), Positives = 276/553 (49%), Gaps = 10/553 (1%)
Query: 1 MSVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNL 60
+S + L+ +L +S + ++H ++++ L + F +K+L F ++ D + A ++
Sbjct: 24 LSPQCQKLINDL-RSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLD-IRYASSI 81
Query: 61 FDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDL 120
F+ ++F++N+MIR ++ + + + A S + ++ D F++ ++ C +
Sbjct: 82 FEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCV 141
Query: 121 DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER-DLVLCNAMISG 179
LH Y +S+A KVF + + D V + +++G
Sbjct: 142 SIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNG 201
Query: 180 YSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDC 239
Y L LF MR+ + + TL+ +S + D L + H LC+K G D
Sbjct: 202 YLQVSKKALALDLFRIMRK-SEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL 260
Query: 240 NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
+ ++ +AL+ MY + ++SA +F + D+V W+ +I + + ++ ++ R +
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMK 320
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
K + LL + A +G + + + + I+ +AL+DMY K G +
Sbjct: 321 YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLE 380
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG--LKPDESTLSGLLCA 417
+ +F M+++++ S+ ++ISG G HGLA +A LF +M E+ ++P+E T +L A
Sbjct: 381 KAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNA 440
Query: 418 CCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG 477
C H GLV +G F+RM++ + P+ EHY +V LLG AG+LEEAY + +L DS
Sbjct: 441 CSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDST 500
Query: 478 IWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIV 537
W ALL+ C V+GN +L E V +L + A ++L+ +A G + +++ DN +
Sbjct: 501 AWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG---NPEKSLDNEL 557
Query: 538 NVGARKMPGLSWI 550
N G RK G S I
Sbjct: 558 NKG-RKEAGYSAI 569
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 229/468 (48%), Gaps = 33/468 (7%)
Query: 114 CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLC 173
C N L + LH Y K S A +VF + RD +
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
++++ + GK L +F+ + +PD F L+ + + G+ +H +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 234 KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALF 293
S + + V S+LV+MY++ +NSA VF + + ++W+A+++G+ + ++AL
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192
Query: 294 FYRNLSV---------------AGKKA-----------------DPILIASLLVASAQLT 321
+R L V +GK DP++++S++ A A L
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 322 DVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVIS 381
G ++HG V+ G +S + +S+ALIDMY KC V +F MR+R++VS+ S+I
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312
Query: 382 GLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
G+ HG A +A L+++M+ G+KP+E T GL+ AC H G V+ G+E+F+ M ++ I
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 442 PRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQ 501
P +HY ++ LLG +G L+EA N + ++ P D W ALLS C G ++ ++
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 502 LFDN-EPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLS 548
L + + + + ++LSNIYAS W V R + + RK PG S
Sbjct: 433 LVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 187/465 (40%), Gaps = 75/465 (16%)
Query: 11 ELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIF 70
+L ++T + K LHA I++ + A ++ Y A +FD+ P R
Sbjct: 11 QLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHI 70
Query: 71 LWNSMIRAFAKAHKFDEALSFYAKMLRTET-KPDNFTYACLIRGCHENFDLDGLRILHXX 129
W S++ A +A+ + LS ++ + + +PD+F ++ L++ C +D R +H
Sbjct: 71 AWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCH 130
Query: 130 XXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG----- 184
Y+K ++ A VF I ++ + AM+SGY+ G
Sbjct: 131 FIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEA 190
Query: 185 -------------FW----------GKGLQLFNGMREIGKQQP---DGFTLVGLISGLMD 218
W GKGL+ F+ E+ +++ D L ++ +
Sbjct: 191 LELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACAN 250
Query: 219 FSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSAL 278
+ G+ +HGL + GFD ++ +AL++MY++ + +A +F + D+V+W++L
Sbjct: 251 LAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSL 310
Query: 279 ITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL 338
I G Q +KAL Y ++ G K + + L+ A + +
Sbjct: 311 IVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHV------------------ 352
Query: 339 ESNIIVSSALIDMYLKCGFVGLGILVFENMRN-----RNIVSYNSVISGLGLHGLAAQAF 393
GFV G +F++M ++ Y ++ LG GL +A
Sbjct: 353 -----------------GFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAE 395
Query: 394 KLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEF 438
L M PDE T + LL AC G + G I ++ F
Sbjct: 396 NLIHTM---PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSF 437
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 211/404 (52%), Gaps = 2/404 (0%)
Query: 147 TAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDG 206
Y + + A KVF + +R L NAMI+G F +GL LF M +G PD
Sbjct: 33 NGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG-FSPDE 91
Query: 207 FTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIG 266
+TL + SG + IGQ IHG +K G + + V S+L +MY R + V
Sbjct: 92 YTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRS 151
Query: 267 LYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
+ +LVAW+ LI G Q + L+ Y+ + ++G + + I ++L + + L G
Sbjct: 152 MPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQG 211
Query: 327 TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLH 386
+IH ++ G S + V S+LI MY KCG +G F + + V ++S+IS G H
Sbjct: 212 QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFH 271
Query: 387 GLAAQAFKLFEEMLEK-GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTE 445
G +A +LF M E+ ++ +E LL AC H+GL G E+F M++++ P +
Sbjct: 272 GQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLK 331
Query: 446 HYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDN 505
HY +V LLG AG L++A + S+ D IW LLS C++H N E+A+ V +++
Sbjct: 332 HYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 391
Query: 506 EPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSW 549
+P A V+L+N++AS RW DV R ++ + +K G+SW
Sbjct: 392 DPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISW 435
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
Query: 247 LVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKAD 306
L+N Y R + +A VF + L W+A+I G +Q E ++ L +R + G D
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 307 PILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFE 366
+ S+ SA L V +G +IHGY +++GLE +++V+S+L MY++ G + G +V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 367 NMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKD 426
+M RN+V++N++I G +G L++ M G +P++ T +L +C +
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 427 GQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCC 486
GQ+I + + ++ + G L +A S + D +W +++S
Sbjct: 211 GQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGDAAK-AFSEREDEDEVMWSSMISAY 268
Query: 487 DVHGNTELA 495
HG + A
Sbjct: 269 GFHGQGDEA 277
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 184/417 (44%), Gaps = 10/417 (2%)
Query: 27 ALILRSHLSHESFYATKIL-RFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKF 85
A+ + + +++ ++ IL Y DL++A +FD+ P R + WN+MI +
Sbjct: 13 AVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFN 72
Query: 86 DEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXX 145
+E LS + +M PD +T + G + + +H
Sbjct: 73 EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSL 132
Query: 146 XTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPD 205
Y + + + V + R+LV N +I G + G L L+ M+ I +P+
Sbjct: 133 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK-ISGCRPN 191
Query: 206 GFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFI 265
T V ++S D ++ G GQ IH +K G V S+L++MYS+ C+ A F
Sbjct: 192 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 251
Query: 266 GLYQPDLVAWSALITGFLQCEDYKKALFFYRNLS-VAGKKADPILIASLLVASAQLTDVR 324
D V WS++I+ + +A+ + ++ + + + +LL A +
Sbjct: 252 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 311
Query: 325 LGTEIHGYVL-RHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-NRNIVSYNSVISG 382
G E+ ++ ++G + + + ++D+ + G + + +M +IV + +++S
Sbjct: 312 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV--KDGQEIFRRMMDE 437
+H A A ++F+E+L+ + P++S LL A HA +D E+ + M D+
Sbjct: 372 CNIHKNAEMAQRVFKEILQ--IDPNDSACYVLL-ANVHASAKRWRDVSEVRKSMRDK 425
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/542 (27%), Positives = 258/542 (47%), Gaps = 46/542 (8%)
Query: 1 MSVKFSSLLQELTKSHQTRSRT--KQLHALILRSHLSHESFYATKILRFYALNDDLIS-- 56
MSV S+ + L+ + + +S T +Q HA +L++ L H++F A+K++ F A N + +
Sbjct: 32 MSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVS 91
Query: 57 -AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCH 115
A+++ ++ + F NS+IRA+A + + AL+ + +ML PD +++ +++ C
Sbjct: 92 YAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACA 151
Query: 116 ENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNA 175
+ R +H Y + + A KV + RD V N+
Sbjct: 152 AFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNS 211
Query: 176 MISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKS 235
++S Y G + LF+ M E + +
Sbjct: 212 LLSAYLEKGLVDEARALFDEMEERNVESWN------------------------------ 241
Query: 236 GFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL-FF 294
F + Y + LV A VF + D+V+W+A++T + Y + L F
Sbjct: 242 -FMISGYAAAGLVK---------EAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVF 291
Query: 295 YRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLK 354
+ L + +K D + S+L A A L + G +H Y+ +HG+E +++AL+DMY K
Sbjct: 292 NKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSK 351
Query: 355 CGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGL 414
CG + + VF R++ ++NS+IS L +HGL A ++F EM+ +G KP+ T G+
Sbjct: 352 CGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGV 411
Query: 415 LCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPV 474
L AC H G++ +++F M + + P EHY +V LLG G++EEA V +
Sbjct: 412 LSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADE 471
Query: 475 DSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRD 534
S + +LL C G E AE ++ +L + R + +SN+YASDGRW+ V R
Sbjct: 472 ASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRR 531
Query: 535 NI 536
N+
Sbjct: 532 NM 533
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 215/424 (50%), Gaps = 32/424 (7%)
Query: 158 ASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLM 217
A +FS I +L + N +I +S K + M + + PD T LI
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK-SRIWPDNITFPFLIKASS 128
Query: 218 DFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSA 277
+ + +G+ H ++ GF + YV ++LV+MY+ + +A +F + D+V+W++
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTS 188
Query: 278 LITGFLQC-------------------------------EDYKKALFFYRNLSVAGKKAD 306
++ G+ +C ++KA+ + + G A+
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVAN 248
Query: 307 PILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFE 366
++ S++ + A L + G + YV++ + N+I+ +AL+DM+ +CG + I VFE
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 367 NMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKD 426
+ + +S++S+I GL +HG A +A F +M+ G P + T + +L AC H GLV+
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK 368
Query: 427 GQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCC 486
G EI+ M + I PR EHY IV +LG AG+L EA NF+L + ++ I GALL C
Sbjct: 369 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGAC 428
Query: 487 DVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPG 546
++ NTE+AE V L +P Y V+LSNIYA G+WD ++ RD + +K PG
Sbjct: 429 KIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488
Query: 547 LSWI 550
S I
Sbjct: 489 WSLI 492
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 199/488 (40%), Gaps = 55/488 (11%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKIL-------RFYALNDDL 54
+++F L +S + S K +H +LR+HL + F A+++L F + L
Sbjct: 8 TLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLL 67
Query: 55 ISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGC 114
AY +F + ++F++N +IR F+ + +A FY +ML++ PDN T+ LI+
Sbjct: 68 GYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS 127
Query: 115 HENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCN 174
E + H Y+ ++ A ++F + RD+V
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 175 AMISGYSYCGF------------------WG-------------KGLQLFNGMREIGKQQ 203
+M++GY CG W K + LF M+ G
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
+ +V +IS L G+ + +KS N +G+ALV+M+ R + A V
Sbjct: 248 NET-VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 264 FIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
F GL + D ++WS++I G KA+ ++ + G + ++L A + V
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 324 RLGTEIHGYVLR-HGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISG 382
G EI+ + + HG+E + ++DM + G + EN + V N+ I G
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA----ENFILKMHVKPNAPILG 422
Query: 383 LGLHGLAAQAFKLFE------EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
L A + +K E ML K +KP+ S LL D E R MM
Sbjct: 423 ALLG--ACKIYKNTEVAERVGNMLIK-VKPEHSGYYVLLSNIYACAGQWDKIESLRDMMK 479
Query: 437 EFCI--PP 442
E + PP
Sbjct: 480 EKLVKKPP 487
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 152/351 (43%), Gaps = 51/351 (14%)
Query: 210 VGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS-------AYG 262
+ L+ FS L I IHG L++ + +V S L+ + N AYG
Sbjct: 16 LALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
+F + P+L ++ LI F + KA FY + + D I L+ AS+++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISG 382
V +G + H ++R G ++++ V ++L+ MY CGF+ +F M R++VS+ S+++G
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 383 LGLHGLAAQAFKLFEEMLEK-------------------------------GLKPDESTL 411
G+ A ++F+EM + G+ +E+ +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 412 SGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI---HIVKLLGMAGELEEAYNFVL 468
++ +C H G ++ G+ + ++ T + I +V + G++E+A + V
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSH----MTVNLILGTALVDMFWRCGDIEKAIH-VF 307
Query: 469 SLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNE--PRKGAYKVMLS 517
+ DS W +++ VHG+ A Q+ PR + +LS
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 268/560 (47%), Gaps = 40/560 (7%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+QLHA + S L +S K++ FY+ + L A + + + WN +I ++ +
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+F E++S Y +M+ + D FTY +I+ C D R++H
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC 222
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
+ Y +F V A ++F + ERD V NA+I+ Y+ G+ +L + M G +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 203 QP-------DGFTL------------------------VGLISGLMDFSLLGI---GQGI 228
G L V +I+GL S +G G+
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVF 342
Query: 229 HGLCLKS---GFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQC 285
H L ++S D + V ++L+ MYSR + A+ VF + L W+++I+GF
Sbjct: 343 HCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 286 EDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVL-RHGLESNIIV 344
E ++ F + + ++G + I +AS+L A++ +++ G E H Y+L R + +I+
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
++L+DMY K G + VF++MR R+ V+Y S+I G G G A F++M G+
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGI 521
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAY 464
KPD T+ +L AC H+ LV++G +F +M F I R EHY +V L AG L++A
Sbjct: 522 KPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKAR 581
Query: 465 NFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQ-LFDNEPRKGAYKVMLSNIYASD 523
+ ++ S + LL C +HGNT + E + + L + +P + ++L+++YA
Sbjct: 582 DIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVT 641
Query: 524 GRWDDVKRTRDNIVNVGARK 543
G W + + + ++G +K
Sbjct: 642 GSWSKLVTVKTLLSDLGVQK 661
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 127/272 (46%), Gaps = 9/272 (3%)
Query: 155 VSEASKVFSGIFERDLVLCNAMISGYSYCGFWGK---GLQLFNGMR-EIGKQQPDGFTLV 210
+SE SK D + + + + +C G+ + F+ +R + G + ++
Sbjct: 33 ISETSKTHD-----DESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSA 87
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP 270
L+S + F+ GQ +H C+ SG + ++ + LV YS F ++ A +
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
+ W+ LI +++ + +++++ Y+ + G +AD S++ A A L D G +H
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 331 GYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAA 390
G + N+ V +ALI MY + G V + +F+ M R+ VS+N++I+
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 391 QAFKLFEEMLEKGLKPDESTLSGLLCACCHAG 422
+AFKL + M G++ T + + C AG
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 268/560 (47%), Gaps = 40/560 (7%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+QLHA + S L +S K++ FY+ + L A + + + WN +I ++ +
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+F E++S Y +M+ + D FTY +I+ C D R++H
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC 222
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
+ Y +F V A ++F + ERD V NA+I+ Y+ G+ +L + M G +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 203 QP-------DGFTL------------------------VGLISGLMDFSLLGI---GQGI 228
G L V +I+GL S +G G+
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVF 342
Query: 229 HGLCLKS---GFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQC 285
H L ++S D + V ++L+ MYSR + A+ VF + L W+++I+GF
Sbjct: 343 HCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 286 EDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVL-RHGLESNIIV 344
E ++ F + + ++G + I +AS+L A++ +++ G E H Y+L R + +I+
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
++L+DMY K G + VF++MR R+ V+Y S+I G G G A F++M G+
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGI 521
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAY 464
KPD T+ +L AC H+ LV++G +F +M F I R EHY +V L AG L++A
Sbjct: 522 KPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKAR 581
Query: 465 NFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQ-LFDNEPRKGAYKVMLSNIYASD 523
+ ++ S + LL C +HGNT + E + + L + +P + ++L+++YA
Sbjct: 582 DIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVT 641
Query: 524 GRWDDVKRTRDNIVNVGARK 543
G W + + + ++G +K
Sbjct: 642 GSWSKLVTVKTLLSDLGVQK 661
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 127/272 (46%), Gaps = 9/272 (3%)
Query: 155 VSEASKVFSGIFERDLVLCNAMISGYSYCGFWGK---GLQLFNGMR-EIGKQQPDGFTLV 210
+SE SK D + + + + +C G+ + F+ +R + G + ++
Sbjct: 33 ISETSKTHD-----DESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSA 87
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP 270
L+S + F+ GQ +H C+ SG + ++ + LV YS F ++ A +
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
+ W+ LI +++ + +++++ Y+ + G +AD S++ A A L D G +H
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 331 GYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAA 390
G + N+ V +ALI MY + G V + +F+ M R+ VS+N++I+
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 391 QAFKLFEEMLEKGLKPDESTLSGLLCACCHAG 422
+AFKL + M G++ T + + C AG
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/577 (26%), Positives = 267/577 (46%), Gaps = 83/577 (14%)
Query: 49 ALNDDLIS--AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFT 106
AL DD S A LFD+ P+R++ WN+++ + ++A + M D +
Sbjct: 147 ALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM----PSRDVVS 202
Query: 107 YACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIF 166
+ +I+G EN ++ ++L Y ++ V EA ++F +
Sbjct: 203 WNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVY----GYCRYGDVREAYRLFCEMP 258
Query: 167 ERDLVLCNAMISGYSYCGFWGKGLQLFNGMR-EIGKQQPDGFTLVGLI--SGLMDFSLLG 223
ER++V AMISG+++ + + L LF M+ ++ P+G TL+ L G +
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 224 IGQGIHGLCLKSGFD-------------------------------------CNAYVGSA 246
+G+ +H + +G++ CN +
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRY 378
Query: 247 LVN--------MYSRFKCMNS-------------------AYGVFIGLYQPDLVAWSALI 279
L N ++ R K ++ A+G+F L+ D V W+ +I
Sbjct: 379 LKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMI 438
Query: 280 TGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG-- 337
+G +Q E + +A ++ G K + LL ++ +++ G IH + +
Sbjct: 439 SGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTAC 498
Query: 338 LESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFE 397
+ ++I+ ++L+ MY KCG + +F M ++ VS+NS+I GL HGLA +A LF+
Sbjct: 499 YDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFK 558
Query: 398 EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMA 457
EML+ G KP+ T G+L AC H+GL+ G E+F+ M + + I P +HYI ++ LLG A
Sbjct: 559 EMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRA 618
Query: 458 GELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTE----LAEIVSQQLFDNEPRKGAYK 513
G+L+EA F+ +L D ++GALL C ++ + +AE + +L + +P
Sbjct: 619 GKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGH 678
Query: 514 VMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V L N+YA GR D K R + G +K PG SW+
Sbjct: 679 VALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWV 715
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/574 (20%), Positives = 220/574 (38%), Gaps = 116/574 (20%)
Query: 25 LHALILRSHLSHESFYATKILRFYAL-----NDD-----------LISAYNLFDKTPQRS 68
L L LRS +S +Y KI + + N++ L+ A +L DK PQR
Sbjct: 13 LSKLSLRSSISCRRYYGDKIPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRG 72
Query: 69 ----IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGL- 123
+ W S++ +AK DEA + E P+ C N L G
Sbjct: 73 SINRVVYWTSLLSKYAKTGYLDEARVLF------EVMPERNIVTC-------NAMLTGYV 119
Query: 124 ---RILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGY 180
R+ TA +A ++F + ER++V N +++G
Sbjct: 120 KCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGL 179
Query: 181 SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCN 240
G K Q+F+ M D + +I G ++ G L + N
Sbjct: 180 IRNGDMEKAKQVFDAM-----PSRDVVSWNAMIKGYIEND----GMEEAKLLFGDMSEKN 230
Query: 241 AYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFY----R 296
+++V Y R+ + AY +F + + ++V+W+A+I+GF E Y++AL + +
Sbjct: 231 VVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKK 290
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLE----------------- 339
++ + ++ + + RLG ++H V+ +G E
Sbjct: 291 DVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYA 350
Query: 340 SNIIVSSA---------------LIDMYLKCGFVGLGILVFENMR--------------- 369
S+ +++SA +I+ YLK G + +FE ++
Sbjct: 351 SSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGY 410
Query: 370 -----------------NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
+++ V++ +ISGL + L A+A L +M+ GLKP ST S
Sbjct: 411 LEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYS 470
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEF-CIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLM 471
LL + + G+ I + C P +V + G +E+AY ++
Sbjct: 471 VLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV 530
Query: 472 QPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDN 505
Q D+ W +++ HG + A + +++ D+
Sbjct: 531 QK-DTVSWNSMIMGLSHHGLADKALNLFKEMLDS 563
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 3/195 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
++ L R H+ T ++ Y D+ A+ LF K + W MI +
Sbjct: 385 ERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQN 444
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXX--XXXXX 140
F EA S + M+R KP N TY+ L+ +LD + +H
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
+ Y+K + +A ++F+ + ++D V N+MI G S+ G K L LF M + G
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG 564
Query: 201 KQQPDGFTLVGLISG 215
K +P+ T +G++S
Sbjct: 565 K-KPNSVTFLGVLSA 578
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/562 (27%), Positives = 255/562 (45%), Gaps = 72/562 (12%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRT--ETKPDNFTYACL 110
DL AY LF P+++ + +MI F +A +FDEA YA+ ++ N +
Sbjct: 128 DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGY 187
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL 170
+R N + +R+ Y K + +A +F + ER++
Sbjct: 188 LRAGKWN---EAVRVFQGMAVKEVVSCSSMVH-----GYCKMGRIVDARSLFDRMTERNV 239
Query: 171 VLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHG 230
+ AMI GY GF+ G LF MR+ G + + TL + DF G IHG
Sbjct: 240 ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG 299
Query: 231 LCLKSGFDCNAYVGSALVNMYSRF-------------------------------KCMNS 259
L + + + ++G++L++MYS+ K ++
Sbjct: 300 LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISE 359
Query: 260 AYGVFIGLYQPDLVAWSALITGFL------QCED-------------------------Y 288
AY +F + D+V+W+ +I GF +C + Y
Sbjct: 360 AYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYY 419
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
++AL ++ + + +S+L A+A L D+ G +IHG V++ + +++ V ++L
Sbjct: 420 EEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSL 479
Query: 349 IDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
+ MY KCG +F + NIVSYN++ISG +G +A KLF + G +P+
Sbjct: 480 VSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNG 539
Query: 409 STLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVL 468
T LL AC H G V G + F+ M + I P +HY +V LLG +G L++A N +
Sbjct: 540 VTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLIS 599
Query: 469 SLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDD 528
++ SG+WG+LLS H +LAE+ +++L + EP V+LS +Y+ G+ D
Sbjct: 600 TMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRD 659
Query: 529 VKRTRDNIVNVGARKMPGLSWI 550
R + + +K PG SWI
Sbjct: 660 CDRIMNIKKSKRIKKDPGSSWI 681
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 8/225 (3%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
SV ++SL+ L + Q + + + +S T +++ ++ ++ LF
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSW-----TDMIKGFSGKGEISKCVELF 395
Query: 62 DKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDL- 120
P++ W +MI AF ++EAL ++ KML+ E P+++T++ ++ DL
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLI 455
Query: 121 DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGY 180
+GL+I H + Y K + ++A K+FS I E ++V N MISGY
Sbjct: 456 EGLQI-HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGY 514
Query: 181 SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIG 225
SY GF K L+LF+ + GK +P+G T + L+S + + +G
Sbjct: 515 SYNGFGKKALKLFSMLESSGK-EPNGVTFLALLSACVHVGYVDLG 558
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 146/345 (42%), Gaps = 60/345 (17%)
Query: 147 TAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDG 206
+ +++ ++ EA +F + R +V AMIS Y+ G K Q+F+ M
Sbjct: 58 SKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMP--------- 108
Query: 207 FTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC-MNSAYGVFI 265
++ NA + + + N KC + AY +F
Sbjct: 109 --------------------------VRVTTSYNAMITAMIKN-----KCDLGKAYELFC 137
Query: 266 GLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK--ADPILIASLLVASAQLTDV 323
+ + + V+++ +ITGF++ + +A F Y V + A +L++ L A V
Sbjct: 138 DIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAV 197
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
R+ G ++ ++ S+++ Y K G + +F+ M RN++++ ++I G
Sbjct: 198 RV---FQGMAVKE-----VVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGY 249
Query: 384 GLHGLAAQAFKLFEEMLEKG-LKPDESTLSGLLCACCHAGLVKDGQEI---FRRMMDEFC 439
G F LF M ++G +K + +TL+ + AC ++G +I RM EF
Sbjct: 250 FKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFD 309
Query: 440 IPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLS 484
+ + + LG GE + V +M+ DS W +L++
Sbjct: 310 L-FLGNSLMSMYSKLGYMGEAKA----VFGVMKNKDSVSWNSLIT 349
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 259/536 (48%), Gaps = 11/536 (2%)
Query: 23 KQLHALIL---RSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAF 79
+ +HA ++ +S + +++ ++ Y + + A LFD P+R++ W +M++ +
Sbjct: 51 ESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGY 110
Query: 80 AKAHKFD-EALSFYAKMLRT-ETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
+ FD E L + M + E++P+ F + + C + ++ + H
Sbjct: 111 QNS-GFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLIS 169
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
YS S EA +V + DL + ++ +SGY CG + +GL + +R
Sbjct: 170 HEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDV---LR 226
Query: 198 EIGKQQ--PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFK 255
+ + + T + + + L + +H ++ GF+ AL+NMY +
Sbjct: 227 KTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCG 286
Query: 256 CMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLV 315
+ A VF + ++ + ++ + Q + +++AL + + + A LL
Sbjct: 287 KVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLN 346
Query: 316 ASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS 375
+ A+L+ ++ G +HG VL+ G ++++V +AL++MY K G + F M R+IV+
Sbjct: 347 SIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVT 406
Query: 376 YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM 435
+N++ISG HGL +A + F+ M+ G P+ T G+L AC H G V+ G F ++M
Sbjct: 407 WNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLM 466
Query: 436 DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
+F + P +HY IV LL AG ++A +F+ + D W LL+ C V N L
Sbjct: 467 KKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLG 526
Query: 496 EIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIG 551
+ V++ + P V+LSNI+A W+ V + R + N G +K PG+SWIG
Sbjct: 527 KKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIG 582
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 265/514 (51%), Gaps = 17/514 (3%)
Query: 44 ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPD 103
+LR + + A +LFD+ PQR + NS + + ++ ++ L+ + ++ R
Sbjct: 24 VLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLS 83
Query: 104 NFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFS 163
+ T+ ++ C + R +H YSK+ H+ ++ +VF
Sbjct: 84 SHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFE 143
Query: 164 GIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM-REIGKQQPDGFTLVGLISGLMDFSLL 222
+ E+DLV NA++SG+ G + L +F M RE + + FTL ++ +L
Sbjct: 144 SVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE--RVEISEFTLSSVVKTCASLKIL 201
Query: 223 GIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALITG 281
G+ +H + + +G D +G+A+++ YS +N A V+ L D V ++LI+G
Sbjct: 202 QQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISG 260
Query: 282 FLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN 341
++ +YK+A ++ ++ + +++S L + +D+ +G +IH LR+G S+
Sbjct: 261 CIRNRNYKEAFLL-----MSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSD 315
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLE 401
+ + L+DMY KCG + +F + ++++VS+ S+I ++G +A ++F EM E
Sbjct: 316 SKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCE 375
Query: 402 KG--LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGE 459
+G + P+ T ++ AC HAGLVK+G+E F M +++ + P TEHY+ + +L AGE
Sbjct: 376 EGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGE 435
Query: 460 LEEAYNFVLSLM----QPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNE-PRKGAYKV 514
EE + V +M Q + IW A+LS C ++ + E V+++L + P + V
Sbjct: 436 TEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYV 495
Query: 515 MLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLS 548
++SN YA+ G+WD V+ R + N G K G S
Sbjct: 496 LVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 138/297 (46%), Gaps = 8/297 (2%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+Q+HAL+++ + T ++ Y+ L+ + +F+ ++ + WN+++ F +
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRN 163
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
K EAL +A M R + FT + +++ C L + +H
Sbjct: 164 GKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVH-AMVVVTGRDLVVLG 222
Query: 143 XXXXTAYSKFSHVSEASKVFSGI-FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
+ YS ++EA KV++ + D V+ N++ISG + + L + +
Sbjct: 223 TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL------MSR 276
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
Q+P+ L ++G D S L IG+ IH + L++GF ++ + + L++MY + + A
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
+F + +V+W+++I + D KAL +R + G P + L+V SA
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISA 393
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 143/534 (26%), Positives = 255/534 (47%), Gaps = 43/534 (8%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQ HA+ + + + ++ T +L FY + A +FD+ ++ + WN +I + +
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 83 HKFDEALSFYAKMLRTET-KPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
++A+ + +++R E K D T A L+ +L + +
Sbjct: 354 GLVEDAI-YMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
Y+K + +A KVF E+DL+L N +++ Y+ G G+ L+LF GM
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM----- 467
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
Q +G + L+ SLL GQ ++ A
Sbjct: 468 -QLEGVPPNVITWNLIILSLLRNGQ------------------------------VDEAK 496
Query: 262 GVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVAS 317
+F+ + P+L++W+ ++ G +Q ++A+ F R + +G + + I L A
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 318 AQLTDVRLGTEIHGYVLRHGLESNII-VSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
A L + +G IHGY++R+ S+++ + ++L+DMY KCG + VF + +
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS 616
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
N++IS L+G +A L+ + GLKPD T++ +L AC HAG + EIF ++
Sbjct: 617 NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
+ + P EHY +V LL AGE E+A + + D+ + +L++ C+ TEL +
Sbjct: 677 KRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVD 736
Query: 497 IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+S++L ++EP V +SN YA +G WD+V + R+ + G +K PG SWI
Sbjct: 737 YLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 790
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 219/424 (51%), Gaps = 3/424 (0%)
Query: 20 SRTKQLHALILRS--HLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIR 77
S KQ+HA IL++ + + TK++ FYA D L A LF K R++F W ++I
Sbjct: 87 STGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIG 146
Query: 78 AFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
+ + AL + +ML E PDNF + + C R +H
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLED 206
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
Y K + +ASKVF I +R+ V NA++ GY G + ++LF+ MR
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR 266
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
+ G +P T+ +S + + G+ H + + +G + + +G++L+N Y + +
Sbjct: 267 KQG-VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVAS 317
A VF +++ D+V W+ +I+G++Q + A++ + + + K D + +A+L+ A+
Sbjct: 326 EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 318 AQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYN 377
A+ +++LG E+ Y +RH ES+I+++S ++DMY KCG + VF++ ++++ +N
Sbjct: 386 ARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWN 445
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
++++ GL+ +A +LF M +G+ P+ T + ++ + G V + +++F +M
Sbjct: 446 TLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS 505
Query: 438 FCIP 441
IP
Sbjct: 506 GIIP 509
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 220/416 (52%), Gaps = 17/416 (4%)
Query: 150 SKFSHVSEASKVFSGIFERDLVLCNAMISGYSY-CGFWGKGLQLFNGMREIGKQQPDGFT 208
S FS V+ A +VF I + N +I ++ + L+ M E G+ PD T
Sbjct: 94 SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHT 153
Query: 209 LVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLY 268
++ G+ +H +K GF + YV + L+++Y C++ A VF +
Sbjct: 154 FPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP 213
Query: 269 QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTE 328
+ LV+W+++I ++ +Y AL +R + + + D + S+L A A L + LGT
Sbjct: 214 ERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTW 272
Query: 329 IHGYVLRH---GLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGL 385
H ++LR + +++V ++LI+MY KCG + + VF+ M+ R++ S+N++I G
Sbjct: 273 AHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFAT 332
Query: 386 HGLAAQAFKLFEEMLEK--GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
HG A +A F+ M++K ++P+ T GLL AC H G V G++ F M+ ++CI P
Sbjct: 333 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPA 392
Query: 444 TEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALL-SCCDVHGNTELAEIVSQQL 502
EHY IV L+ AG + EA + V+S+ D+ IW +LL +CC + EL+E +++ +
Sbjct: 393 LEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNI 452
Query: 503 F----DNEPRK----GAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
DNE GAY V+LS +YAS RW+DV R + G RK PG S I
Sbjct: 453 IGTKEDNESSNGNCSGAY-VLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSI 507
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 180/436 (41%), Gaps = 48/436 (11%)
Query: 12 LTKSHQTRSRTKQLHALILRSHLSHES---FYATKILRFYALNDDLISAYNLFDKTPQRS 68
L ++ S+ KQLHA LR+ E F KIL+ + D+ A+ +FD S
Sbjct: 54 LAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHS 113
Query: 69 IFLWNSMIRAFA-KAHKFDEALSFYAKML-RTETKPDNFTYACLIRGCHENFDLDGLRIL 126
F+WN++IRA A + +EA Y KML R E+ PD T+ +++ C F + +
Sbjct: 114 SFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQV 173
Query: 127 HXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFW 186
H Y + A KVF + ER LV N+MI G +
Sbjct: 174 HCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEY 233
Query: 187 GKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKS---GFDCNAYV 243
LQLF M+ +PDG+T+ ++S L +G H L+ + V
Sbjct: 234 DSALQLFREMQR--SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
++L+ MY + + A VF G+ + DL +W+A+I GF ++A+ F+ + +
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 304 KADP--ILIASLLVASAQLTDVRLGTEIHGYVLR-HGLESNIIVSSALIDMYLKCGFVGL 360
P + LL+A V G + ++R + +E + ++D+ + G++
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Query: 361 GILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCH 420
I + ++ +KPD LL ACC
Sbjct: 412 AI----------------------------------DMVMSMPMKPDAVIWRSLLDACCK 437
Query: 421 AGL-VKDGQEIFRRMM 435
G V+ +EI R ++
Sbjct: 438 KGASVELSEEIARNII 453
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/437 (31%), Positives = 227/437 (51%), Gaps = 47/437 (10%)
Query: 155 VSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLIS 214
+S A +VF + + L N MISGY G + L L M G ++ DG+TL ++
Sbjct: 85 LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSG-EKADGYTLSMVLK 143
Query: 215 G--------LMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIG 266
++ SL + +H +K + + + +ALV+ Y + + SA VF
Sbjct: 144 ASNSRGSTMILPRSLCRL---VHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 267 LYQ-------------------------------PDLVAWSALITGFLQC-EDYKKALFF 294
+ D+V ++A++ GF + E K+++
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 295 YRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLK 354
Y ++ AG + AS++ A + LT +G ++H +++ G+ ++I + S+L+DMY K
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 355 CGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGL 414
CG + VF+ M+ +N+ S+ S+I G G +G +A +LF M E ++P+ T G
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGA 380
Query: 415 LCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPV 474
L AC H+GLV G EIF M ++ + P+ EHY IV L+G AG+L +A+ F ++ +
Sbjct: 381 LSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERP 440
Query: 475 DSGIWGALLSCCDVHGNTELAEIVSQQLF--DNEPRKGAYKVMLSNIYASDGRWDDVKRT 532
DS IW ALLS C++HGN ELA I + +LF + + R GAY + LSN+YAS+ +WD+V +
Sbjct: 441 DSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAY-LALSNVYASNDKWDNVSKI 499
Query: 533 RDNIVNVGARKMPGLSW 549
R+ + K G SW
Sbjct: 500 REVMKRRRISKTIGRSW 516
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 138/314 (43%), Gaps = 51/314 (16%)
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
G+ IH +K+GF + + L+ ++ + C++ A VF L +P L A++ +I+G+L+
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVA-----SAQLTDVRLGTEIHGYVLRHGLE 339
K+ L + +S +G+KAD ++ +L A S + L +H +++ +E
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 340 SNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFE-- 397
+ ++ +AL+D Y+K G + VFE M++ N+V S+ISG G A ++F
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 398 ------------------------------EMLEKGLKPDESTLSGLLCACCHAGLVKDG 427
M G P+ ST + ++ AC + G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 428 QEIFRRMMDEFCIPPRTEHYIHI------VKLLGMAGELEEAYNFVLSLMQPVDSGIWGA 481
Q++ ++M ++ Y HI + + G + +A V MQ + W +
Sbjct: 293 QQVHAQIM-------KSGVYTHIKMGSSLLDMYAKCGGINDARR-VFDQMQEKNVFSWTS 344
Query: 482 LLSCCDVHGNTELA 495
++ +GN E A
Sbjct: 345 MIDGYGKNGNPEEA 358
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 175/458 (38%), Gaps = 80/458 (17%)
Query: 9 LQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRS 68
LQE S ++ K++HA I+++ + + K+L + L A +FD+ P+ +
Sbjct: 41 LQEHINSPAPKA-GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPT 99
Query: 69 IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLI-----RGCHENFDLDGL 123
+ +N MI + K E L +M + K D +T + ++ RG
Sbjct: 100 LSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLC 159
Query: 124 RILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYC 183
R++H Y K + A VF + + ++V C +MISGY
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQ 219
Query: 184 GFWGKGLQLFNGMR------------------EIGKQQPD--------GF-----TLVGL 212
GF ++FN + E K+ D GF T +
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 213 ISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL 272
I + +GQ +H +KSG + +GS+L++MY++ +N A VF + + ++
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 273 VAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGY 332
+W+++I G+ GK +P L ++ + R
Sbjct: 340 FSWTSMIDGY-------------------GKNGNPEEALELFT---RMKEFR-------- 369
Query: 333 VLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-----NRNIVSYNSVISGLGLHG 387
+E N + + G V G +FE+M+ + Y ++ +G G
Sbjct: 370 -----IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAG 424
Query: 388 LAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVK 425
+AF+ M E +PD + LL +C G V+
Sbjct: 425 DLNKAFEFARAMPE---RPDSDIWAALLSSCNLHGNVE 459
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 218/436 (50%), Gaps = 33/436 (7%)
Query: 147 TAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDG 206
+ Y K + A VF + ERD+V N M+ GY+ G + L + R G + +
Sbjct: 121 SGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNE- 179
Query: 207 FTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNA------------------------- 241
F+ GL++ + L + + HG L +GF N
Sbjct: 180 FSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 242 ------YVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFY 295
++ + L++ Y++ M +A +F + + + V+W+ALI G+++ +AL +
Sbjct: 240 MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 296 RNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKC 355
R + G K + +S L ASA + +R G EIHGY++R + N IV S+LIDMY K
Sbjct: 300 RKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKS 359
Query: 356 GFVGLGILVFENMRNR-NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGL 414
G + VF ++ + V +N++IS L HGL +A ++ ++M++ ++P+ +TL +
Sbjct: 360 GSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVI 419
Query: 415 LCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPV 474
L AC H+GLV++G F M + I P EHY ++ LLG AG +E + +
Sbjct: 420 LNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEP 479
Query: 475 DSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRD 534
D IW A+L C +HGN EL + + +L +P A ++LS+IYA G+W+ V++ R
Sbjct: 480 DKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRG 539
Query: 535 NIVNVGARKMPGLSWI 550
+ K +SWI
Sbjct: 540 VMKKRRVNKEKAVSWI 555
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 32/282 (11%)
Query: 240 NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
N Y + +V+ Y + + A VF + + D+V+W+ ++ G+ Q + +AL+FY+
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG--- 356
+G K + A LL A + ++L + HG VL G SN+++S ++ID Y KCG
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 357 -----------------------FVGLGIL-----VFENMRNRNIVSYNSVISGLGLHGL 388
+ LG + +F M +N VS+ ++I+G G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 389 AAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI 448
+A LF +M+ G+KP++ T S LCA ++ G+EI M+ + P
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI-RTNVRPNAIVIS 350
Query: 449 HIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
++ + +G LE + D W ++S HG
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG 392
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 166/399 (41%), Gaps = 41/399 (10%)
Query: 48 YALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTY 107
Y + L+ A +FD P+R + WN+M+ +A+ EAL FY + R+ K + F++
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 108 ACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE 167
A L+ C ++ L R H AY+K + A + F +
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 168 RDLVLCNAMISGYS-----------YC--------------------GFWGKGLQLFNGM 196
+D+ + +ISGY+ +C G + L LF M
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 197 REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC 256
+G +P+ FT + + L G+ IHG +++ NA V S+L++MYS+
Sbjct: 303 IALG-VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS 361
Query: 257 MNSAYGVF-IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLV 315
+ ++ VF I + D V W+ +I+ Q KAL ++ + + + +L
Sbjct: 362 LEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILN 421
Query: 316 ASAQLTDVRLGTE-IHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENM---RNR 371
A + V G ++HG+ + + LID+ + G + E M ++
Sbjct: 422 ACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDK 481
Query: 372 NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDEST 410
+I +N+++ +HG K +E+++ L P+ S
Sbjct: 482 HI--WNAILGVCRIHGNEELGKKAADELIK--LDPESSA 516
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 102/241 (42%), Gaps = 4/241 (1%)
Query: 42 TKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETK 101
T ++ YA D+ +A LF + P+++ W ++I + + + AL + KM+ K
Sbjct: 249 TTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
Query: 102 PDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKV 161
P+ FT++ + L + +H YSK + + +V
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERV 368
Query: 162 FSGIFER-DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFS 220
F ++ D V N MIS + G K L++ + M + + QP+ TLV +++
Sbjct: 369 FRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF-RVQPNRTTLVVILNACSHSG 427
Query: 221 LLGIG-QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSAL 278
L+ G + + ++ G + + L+++ R C + ++PD W+A+
Sbjct: 428 LVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAI 487
Query: 279 I 279
+
Sbjct: 488 L 488
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 47/277 (16%)
Query: 269 QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTE 328
+P VA S L + E +A+ +L+ G + L+ASLL ++ G
Sbjct: 9 RPICVAQSFLSKHATKAE-LSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKW 67
Query: 329 IHGYVLRHGLE-SNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHG 387
IH ++ G + N ++S+ LI MY+KCG VF+ M RN+ S+N+++SG G
Sbjct: 68 IHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSG 127
Query: 388 LAAQAFKLFEEMLEK-------------------------------GLKPDESTLSGLLC 416
+ +A +F+ M E+ G+K +E + +GLL
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 417 ACCHAGLVKDGQ-EIFRRMMDEFCIPPRTEHYI---HIVKLLGMAGELEEAYNFVLSLMQ 472
AC VK Q ++ R+ + + + + I+ G++E A M
Sbjct: 188 AC-----VKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKR-CFDEMT 241
Query: 473 PVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRK 509
D IW L+S G+ E AE +LF P K
Sbjct: 242 VKDIHIWTTLISGYAKLGDMEAAE----KLFCEMPEK 274
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/560 (26%), Positives = 258/560 (46%), Gaps = 62/560 (11%)
Query: 21 RTKQLHALILRSHLSH-ESFYATKILRF---YALN-----DDLISAYNLFDKTPQRSIFL 71
+ KQ+HA ++ + +H E + L F ++ N ++ +N D F
Sbjct: 287 QAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDS------FS 340
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
W ++R ++ KF E + Y M + P + ++R C + ++ + +H
Sbjct: 341 WGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQAL 400
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQ 191
YS+ ++ A K F I E++ V N+++ GY G + +
Sbjct: 401 KNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARR 460
Query: 192 LFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI-HGLCLKSGFDCNAYVGSALVNM 250
+F+ + E D + +IS +G + + LKS N +G
Sbjct: 461 VFDKIPE-----KDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGG----- 510
Query: 251 YSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK------- 303
Y + M A F + Q + V+W +I+G+ + D + A +R +S K
Sbjct: 511 YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 570
Query: 304 --------------------------KADPILIASLLVASAQLTDVRLGTEIHGYVLRHG 337
+ D I ++S++ A++QL + GT + Y+ HG
Sbjct: 571 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHG 630
Query: 338 LESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFE 397
++ + ++S++LID+Y+K G +F N+ ++ VSY+++I G G++G+A +A LF
Sbjct: 631 IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFT 690
Query: 398 EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMA 457
M+EK + P+ T +GLL A H+GLV++G + F M D + P +HY +V +LG A
Sbjct: 691 AMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDH-NLEPSADHYGIMVDMLGRA 749
Query: 458 GELEEAYNFVLSL-MQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVML 516
G LEEAY + S+ MQP ++G+WGALL +H N E EI E Y L
Sbjct: 750 GRLEEAYELIKSMPMQP-NAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHL 808
Query: 517 SNIYASDGRWDDVKRTRDNI 536
+ IY+S GRWDD + RD+I
Sbjct: 809 AMIYSSVGRWDDARTVRDSI 828
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/538 (27%), Positives = 253/538 (47%), Gaps = 28/538 (5%)
Query: 34 LSHESFYATKIL------RFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDE 87
LSH Y+ ++ YA +++ A +FD P+R++ W ++I + +A E
Sbjct: 86 LSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQE 145
Query: 88 ALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXT 147
++ ML + P+ FT + ++ C + + +H +
Sbjct: 146 GFCLFSSML-SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVIS 200
Query: 148 AYSKF---SHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
Y + + EA VF I ++LV N+MI+ + C K + +F M G
Sbjct: 201 MYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGF- 259
Query: 205 DGFTLVGLISGLMDFSLLGIGQ------GIHGLCLKSGFDCNAYVGSALVNMYSR-FKCM 257
D TL+ + S L S L + +H L +KSG V +AL+ +YS +
Sbjct: 260 DRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDY 319
Query: 258 NSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
Y +F+ + + D+VAW+ +IT F D ++A+ + L D +S+L A
Sbjct: 320 TDCYKLFMEMSHCRDIVAWNGIITAF-AVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKA 378
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
A L R IH V++ G ++ +++++LI Y KCG + L + VF++M +R++VS+
Sbjct: 379 CAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSW 438
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
NS++ LHG +F++M + PD +T LL AC HAG V++G IFR M +
Sbjct: 439 NSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFE 495
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
+ P+ HY ++ +L A EA + + D+ +W ALL C HGNT L +
Sbjct: 496 KPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGK 555
Query: 497 IVSQQLFD-NEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
+ + +L + EP + +SNIY ++G +++ + + RK P LSW G
Sbjct: 556 LAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIG 613
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 172/365 (47%), Gaps = 30/365 (8%)
Query: 76 IRAFAKAHKFDEALS-FYAKMLRTETKPDNFTYACLIRGCHENFDL-DGLRILHXXXXXX 133
+R ++ A+S FY+ + +++ YA L + C E +L DG+ + H
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQ---AYAALFQACAEQRNLLDGINLHHHMLSHP 89
Query: 134 X-XXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQL 192
Y+K ++ A +VF + ER++V A+I+GY G +G L
Sbjct: 90 YCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCL 149
Query: 193 FNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYS 252
F+ M + P+ FTL S ++ G+ +HGL LK G C+ YV +A+++MY
Sbjct: 150 FSSM--LSHCFPNEFTL----SSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYG 203
Query: 253 RFKCMN-----SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAG---KK 304
R C + A+ VF + +LV W+++I F C KKA+ + + G +
Sbjct: 204 R--CHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDR 261
Query: 305 ADPILIASLLVASAQLTDVRLGT---EIHGYVLRHGLESNIIVSSALIDMYLKC--GFVG 359
A + I S L S+ L + ++H ++ GL + V++ALI +Y + +
Sbjct: 262 ATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTD 321
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
L E R+IV++N +I+ ++ +A LF ++ ++ L PD T S +L AC
Sbjct: 322 CYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKAC- 379
Query: 420 HAGLV 424
AGLV
Sbjct: 380 -AGLV 383
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 112/271 (41%), Gaps = 13/271 (4%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAY---NLFDKTPQRSIFLWNSMIRAF 79
KQ+H L L+ L + A ++ Y D +AY +F+ +++ WNSMI AF
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI------LHXXXXXX 133
+ +A+ + +M D T + +++ DL + LH
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKS 296
Query: 134 XXXXXXXXXXXXXTAYSK-FSHVSEASKVFSGIFE-RDLVLCNAMISGYSYCGFWGKGLQ 191
YS+ ++ K+F + RD+V N +I+ ++ + +
Sbjct: 297 GLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIH 355
Query: 192 LFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMY 251
LF +R+ K PD +T ++ IH +K GF + + ++L++ Y
Sbjct: 356 LFGQLRQ-EKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAY 414
Query: 252 SRFKCMNSAYGVFIGLYQPDLVAWSALITGF 282
++ ++ VF + D+V+W++++ +
Sbjct: 415 AKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 216/432 (50%), Gaps = 34/432 (7%)
Query: 152 FSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVG 211
S+ A++VFS I ++++ NAMI YS G + L F+ M+ G D +T
Sbjct: 49 LSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRG-IWADEYTYAP 107
Query: 212 LISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPD 271
L+ S L G+ +HG +++GF + +V +Y+ M A VF + + +
Sbjct: 108 LLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERN 167
Query: 272 LVAWSALITGFLQCEDYKKALFFYRNLSV------------------------------- 300
+V W+ +I GF D ++ L ++ +S
Sbjct: 168 VVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMID 227
Query: 301 AGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN-IIVSSALIDMYLKCGFVG 359
G D + ++L SA L + G IH GL + I V +AL+D Y K G +
Sbjct: 228 QGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLE 287
Query: 360 LGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG-LKPDESTLSGLLCAC 418
+F M+ RN+VS+N++ISG ++G LF+ M+E+G + P+E+T G+L C
Sbjct: 288 AATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACC 347
Query: 419 CHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGI 478
+ G V+ G+E+F MM+ F + RTEHY +V L+ +G + EA+ F+ ++ ++ +
Sbjct: 348 SYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAM 407
Query: 479 WGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVN 538
WG+LLS C HG+ +LAE+ + +L EP V+LSN+YA +GRW DV++ R +
Sbjct: 408 WGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKK 467
Query: 539 VGARKMPGLSWI 550
RK G S I
Sbjct: 468 NRLRKSTGQSTI 479
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 169/413 (40%), Gaps = 34/413 (8%)
Query: 9 LQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRS 68
L L H TR+R ++HA +LR L + + + A +F +
Sbjct: 7 LLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPN 66
Query: 69 IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHX 128
+ ++N+MI+ ++ E+LSF++ M D +TYA L++ C DL + +H
Sbjct: 67 VLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHG 126
Query: 129 XXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGK 188
Y+ + +A KVF + ER++V+ N MI G+ G +
Sbjct: 127 ELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVER 186
Query: 189 GLQLFNGMRE---------------IGKQQ---------------PDGFTLVGLISGLMD 218
GL LF M E G+ + PD T+V ++
Sbjct: 187 GLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISAS 246
Query: 219 FSLLGIGQGIHGLCLKSG-FDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSA 277
+L G+ IH SG F VG+ALV+ Y + + +A +F + + ++V+W+
Sbjct: 247 LGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNT 306
Query: 278 LITGFLQCEDYKKALFFYRNLSVAGKKA-DPILIASLLVASAQLTDVRLGTEIHGYVL-R 335
LI+G + + + + GK A + +L + V G E+ G ++ R
Sbjct: 307 LISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER 366
Query: 336 HGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-NRNIVSYNSVISGLGLHG 387
LE+ A++D+ + G + +NM N N + S++S HG
Sbjct: 367 FKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 115/286 (40%), Gaps = 38/286 (13%)
Query: 44 ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPD 103
++R + + D+ +LF + +RSI WNSMI + +K + EAL + +M+ PD
Sbjct: 174 MIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPD 233
Query: 104 NFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTA-YSKFSHVSEASKVF 162
T ++ LD + +H Y K + A+ +F
Sbjct: 234 EATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 163 SGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLL 222
+ R++V N +ISG + G G+ LF+ M E GK P+ T +G+++ +
Sbjct: 294 RKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQV 353
Query: 223 GIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFK--CMNSAYGVFIGLYQPDLVAWSALIT 280
G+ + GL M RFK YG + DL++ S IT
Sbjct: 354 ERGEELFGL------------------MMERFKLEARTEHYGAMV-----DLMSRSGRIT 390
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
+A F +N+ V A+ + SLL A DV+L
Sbjct: 391 ---------EAFKFLKNMPV---NANAAMWGSLLSACRSHGDVKLA 424
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 245/509 (48%), Gaps = 82/509 (16%)
Query: 48 YALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTY 107
YA + + A LFD+ P+R+I WNSM++A + + DEA++ + +M R D ++
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSW 205
Query: 108 ACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE 167
++ G +N +D EA ++F + E
Sbjct: 206 TAMVDGLAKNGKVD-----------------------------------EARRLFDCMPE 230
Query: 168 RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQG 227
R+++ NAMI+GY+ + QLF M E D + +I+G +
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMPE-----RDFASWNTMITGFI---------- 275
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCED 287
R + MN A G+F + + ++++W+ +ITG+++ ++
Sbjct: 276 -------------------------RNREMNKACGLFDRMPEKNVISWTTMITGYVENKE 310
Query: 288 YKKAL-FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSS 346
++AL F + L K + S+L A + L + G +IH + + + N IV+S
Sbjct: 311 NEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTS 370
Query: 347 ALIDMYLKCGFVGLGILVFEN--MRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
AL++MY K G + +F+N + R+++S+NS+I+ HG +A +++ +M + G
Sbjct: 371 ALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGF 430
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAY 464
KP T LL AC HAGLV+ G E F+ ++ + +P R EHY +V L G AG L++
Sbjct: 431 KPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVT 490
Query: 465 NFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDG 524
NF+ + +GA+LS C+VH +A+ V +++ + V++SNIYA++G
Sbjct: 491 NFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANG 550
Query: 525 RWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
+ ++ R + G +K PG SW+ G
Sbjct: 551 KREEAAEMRMKMKEKGLKKQPGCSWVKVG 579
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 165/361 (45%), Gaps = 33/361 (9%)
Query: 151 KFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLV 210
K ++EA K+F G+ ERD+V +I+GY G + +LF+ + + + T
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV----DSRKNVVTWT 113
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP 270
++SG + L I + + + + N + +++ Y++ ++ A +F + +
Sbjct: 114 AMVSGYLRSKQLSIAE----MLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
++V+W++++ +Q +A+ + + + D + +++ A+ V +
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 331 GYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAA 390
+ E NII +A+I Y + + +F+ M R+ S+N++I+G +
Sbjct: 226 DCM----PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMN 281
Query: 391 QAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQE---IFRRMMDEFCIPPRTEHY 447
+A LF+ M EK + + ++G + K+ +E +F +M+ + + P Y
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVEN-------KENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 448 IHIVKLLG-MAG--ELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFD 504
+ I+ +AG E ++ + + + + + ALL+ G EL I ++++FD
Sbjct: 335 VSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG--EL--IAARKMFD 390
Query: 505 N 505
N
Sbjct: 391 N 391
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDK--TPQRSIFLWNSMIRAFA 80
+Q+H LI +S + +L Y+ + +LI+A +FD QR + WNSMI +A
Sbjct: 351 QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 410
Query: 81 KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGC 114
EA+ Y +M + KP TY L+ C
Sbjct: 411 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFAC 444
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 143/532 (26%), Positives = 248/532 (46%), Gaps = 28/532 (5%)
Query: 35 SHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAK 94
S +SF ++ YA N + A LF+K P+R+ W++MI F + + D A+ + K
Sbjct: 133 SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 95 MLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSH 154
M ++ P A LI+ +E + Y +
Sbjct: 193 MPVKDSSPLCALVAGLIK--NERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQ 250
Query: 155 VSEASKVFSGI---------------FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREI 199
V A +F I F +++V N+MI Y G LF+ M++
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD- 309
Query: 200 GKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
D + +I G + S + + + +A+ + +V+ Y+ +
Sbjct: 310 ----RDTISWNTMIDGYVHVSRMEDAFAL----FSEMPNRDAHSWNMMVSGYASVGNVEL 361
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
A F + V+W+++I + + +DYK+A+ + +++ G+K DP + SLL AS
Sbjct: 362 ARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTG 421
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-NRNIVSYNS 378
L ++RLG ++H V++ + ++ V +ALI MY +CG + +F+ M+ R ++++N+
Sbjct: 422 LVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNA 480
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEF 438
+I G HG A++A LF M G+ P T +L AC HAGLV + + F MM +
Sbjct: 481 MIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVY 540
Query: 439 CIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIV 498
I P+ EHY +V + G+ EEA + S+ D +WGALL C ++ N LA +
Sbjct: 541 KIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVA 600
Query: 499 SQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++ + EP V+L N+YA G WD+ + R N+ + +K G SW+
Sbjct: 601 AEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 186/467 (39%), Gaps = 53/467 (11%)
Query: 54 LISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG 113
+ A ++F+K R+ WN+MI + K + ++A + M K D T+ +I G
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PKRDVVTWNTMISG 111
Query: 114 CHENFDLDGLRILHXXXX--XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLV 171
G+R L + Y+K + EA +F + ER+ V
Sbjct: 112 Y---VSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAV 168
Query: 172 LCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGL 231
+AMI+G+ G + LF M D L L++GL+ L + G
Sbjct: 169 SWSAMITGFCQNGEVDSAVVLFRKM-----PVKDSSPLCALVAGLIKNERLSEAAWVLGQ 223
Query: 232 --CLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL----------------- 272
L SG + Y + L+ Y + + +A +F + PDL
Sbjct: 224 YGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI--PDLCGDDHGGEFRERFCKNV 281
Query: 273 VAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLL---VASAQLTDV-RLGTE 328
V+W+++I +L+ D A + + K D I +++ V +++ D L +E
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQM----KDRDTISWNTMIDGYVHVSRMEDAFALFSE 337
Query: 329 IHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGL 388
+ R N++VS Y G V L FE ++ VS+NS+I+ +
Sbjct: 338 MPN---RDAHSWNMMVSG-----YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKD 389
Query: 389 AAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI 448
+A LF M +G KPD TL+ LL A ++ G ++ + ++ + P +
Sbjct: 390 YKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVK--TVIPDVPVHN 447
Query: 449 HIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
++ + GE+ E+ + + W A++ HGN A
Sbjct: 448 ALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 125/296 (42%), Gaps = 62/296 (20%)
Query: 154 HVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLI 213
+++EA +F + R+ V N MISGY + +LF+ M + D T +I
Sbjct: 55 YIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM-----PKRDVVTWNTMI 109
Query: 214 SGLMDFSLLGIGQGIHGLCLKSGFD----CNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ 269
SG + + + L FD +++ + +++ Y++ + + A +F + +
Sbjct: 110 SGYVSCGGIRFLEEARKL-----FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPE 164
Query: 270 PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPI--LIA---------------- 311
+ V+WSA+ITGF Q + A+ +R + V K + P+ L+A
Sbjct: 165 RNAVSWSAMITGFCQNGEVDSAVVLFRKMPV--KDSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 312 -----------------SLLVASAQLTDVR-----------LGTEIHGYVLRHGLESNII 343
+L+V Q V L + HG R N++
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEM 399
+++I YLK G V L+F+ M++R+ +S+N++I G AF LF EM
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 204/401 (50%), Gaps = 6/401 (1%)
Query: 155 VSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTL-VGLI 213
++ + +VFS L CN MI +S +G +LF +R + + L
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 214 SGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLV 273
+ LLG G IHG GF ++ + + L+++YS + A VF + + D V
Sbjct: 122 CCIKSGDLLG-GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTV 180
Query: 274 AWSALITGFLQCEDYKKALFFYRNL--SVAG-KKADPILIASLLVASAQLTDVRLGTEIH 330
+W+ L + +L+ + + L + + V G K D + L A A L + G ++H
Sbjct: 181 SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVH 240
Query: 331 GYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAA 390
++ +GL + +S+ L+ MY +CG + VF MR RN+VS+ ++ISGL ++G
Sbjct: 241 DFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGK 300
Query: 391 QAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD-EFCIPPRTEHYIH 449
+A + F EML+ G+ P+E TL+GLL AC H+GLV +G F RM EF I P HY
Sbjct: 301 EAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGC 360
Query: 450 IVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRK 509
+V LLG A L++AY+ + S+ DS IW LL C VHG+ EL E V L + + +
Sbjct: 361 VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEE 420
Query: 510 GAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V+L N Y++ G+W+ V R + PG S I
Sbjct: 421 AGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAI 461
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 202/497 (40%), Gaps = 80/497 (16%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALN---DDLISAYNLFDKTPQRSIFLWNSMIRAF 79
+Q+HAL+LR+ L S L AL+ D+ + +F + ++ N+MIRAF
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAF 87
Query: 80 AKAHKFDEALSFYAKMLRTETKPDN-FTYACLIRGCHENFDLDGLRILHXXXXXXXXXXX 138
+ + E + + R + P N + + ++ C ++ DL G +H
Sbjct: 88 SLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSD 147
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE 198
YS + ++A KVF I +RD V N + S Y L LF+ M+
Sbjct: 148 SLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKN 207
Query: 199 --IGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC 256
G +PDG T + + + L G+ +H ++G + + LV+MYSR
Sbjct: 208 DVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGS 267
Query: 257 MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
M+ AY VF G+ + ++V+W+ALI+G ++ GK+A
Sbjct: 268 MDKAYQVFYGMRERNVVSWTALISGLA--------------MNGFGKEA----------- 302
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN------ 370
E +L+ G+ + L+ G V G++ F+ MR+
Sbjct: 303 ----------IEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIK 352
Query: 371 RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
N+ Y V+ LG L +A+ L + M +KPD + LL AC G V+ G+ +
Sbjct: 353 PNLHHYGCVVDLLGRARLLDKAYSLIKSM---EMKPDSTIWRTLLGACRVHGDVELGERV 409
Query: 431 FRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
H+++L + EEA ++VL L G W +
Sbjct: 410 IS----------------HLIEL-----KAEEAGDYVLLLNTYSTVGKWEKV-------- 440
Query: 491 NTELAEIVSQQLFDNEP 507
TEL ++ ++ +P
Sbjct: 441 -TELRSLMKEKRIHTKP 456
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 210/426 (49%), Gaps = 34/426 (7%)
Query: 158 ASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP-DGFTLVGLISGL 216
A VF G D L N MI G+S + L L+ M + P + +T L+
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRM--LCSSAPHNAYTFPSLLKAC 125
Query: 217 MDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYS---RFKC----------------- 256
+ S IH K G++ + Y ++L+N Y+ FK
Sbjct: 126 SNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWN 185
Query: 257 -----------MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKA 305
M+ A +F + + + ++W+ +I+G++Q + K+AL + + + +
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 306 DPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF 365
D + +A+ L A AQL + G IH Y+ + + + ++ LIDMY KCG + + VF
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 366 ENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVK 425
+N++ +++ ++ ++ISG HG +A F EM + G+KP+ T + +L AC + GLV+
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 426 DGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSC 485
+G+ IF M ++ + P EHY IV LLG AG L+EA F+ + ++ IWGALL
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 486 CDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMP 545
C +H N EL E + + L +P G V +NI+A D +WD TR + G K+P
Sbjct: 426 CRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 485
Query: 546 GLSWIG 551
G S I
Sbjct: 486 GCSTIS 491
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 184/463 (39%), Gaps = 82/463 (17%)
Query: 7 SLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRF---YALNDDLISAYNLFDK 63
S LQ +K + KQ+HA +L++ L +S+ TK L F +D L A +FD
Sbjct: 19 SCLQRCSKQEEL----KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74
Query: 64 TPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGL 123
+ FLWN MIR F+ + + + +L Y +ML + + +T+ L++ C +
Sbjct: 75 FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134
Query: 124 RILHXXXXXXXXXXXXXXXXXXXTAYSK----------FSHVSEASKV------------ 161
+H +Y+ F + E V
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 162 ---------FSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGL 212
F + E++ + MISGY + LQLF+ M+ +PD +L
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN-SDVEPDNVSLANA 253
Query: 213 ISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL 272
+S L G+ IH K+ ++ +G L++MY++ M A VF + + +
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 273 VAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGY 332
AW+ALI+G+ ++A+ + +
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQ--------------------------------- 340
Query: 333 VLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENM-RNRN----IVSYNSVISGLGLHG 387
+ G++ N+I +A++ G V G L+F +M R+ N I Y ++ LG G
Sbjct: 341 --KMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAG 398
Query: 388 LAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
L +A + +EM LKP+ LL AC ++ G+EI
Sbjct: 399 LLDEAKRFIQEM---PLKPNAVIWGALLKACRIHKNIELGEEI 438
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 131/313 (41%), Gaps = 62/313 (19%)
Query: 226 QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS--------AYGVFIGLYQPDLVAWSA 277
+ IH LK+G ++Y + ++ C++S A VF G +PD W+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSF-----CISSTSSDFLPYAQIVFDGFDRPDTFLWNL 85
Query: 278 LITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG 337
+I GF ++ +++L Y+ + + + SLL A + L+ T+IH + + G
Sbjct: 86 MIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 338 LESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHG---------- 387
E+++ ++LI+ Y G L L+F+ + + VS+NSVI G G
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 388 ---------------------LAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKD 426
+ +A +LF EM ++PD +L+ L AC G ++
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 427 GQEIF------RRMMDEF--CIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGI 478
G+ I R MD C+ ++ + GE+EEA V ++
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCV---------LIDMYAKCGEMEEALE-VFKNIKKKSVQA 315
Query: 479 WGALLSCCDVHGN 491
W AL+S HG+
Sbjct: 316 WTALISGYAYHGH 328
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 180/327 (55%), Gaps = 2/327 (0%)
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
G G H L LK GF + Y+GS+LV +Y + +AY VF + + ++V+W+A+I+GF Q
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIV 344
L Y + + + +LL A + G +H L GL+S + +
Sbjct: 199 EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHI 258
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK-G 403
S++LI MY KCG + +F+ N+++VS+NS+I+G HGLA QA +LFE M+ K G
Sbjct: 259 SNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSG 318
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEA 463
KPD T G+L +C HAGLVK+G++ F +M E + P HY +V LLG G L+EA
Sbjct: 319 TKPDAITYLGVLSSCRHAGLVKEGRKFF-NLMAEHGLKPELNHYSCLVDLLGRFGLLQEA 377
Query: 464 YNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASD 523
+ ++ +S IWG+LL C VHG+ +++ EP A V L+N+YAS
Sbjct: 378 LELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASV 437
Query: 524 GRWDDVKRTRDNIVNVGARKMPGLSWI 550
G W + R + + G + PG SWI
Sbjct: 438 GYWKEAATVRKLMKDKGLKTNPGCSWI 464
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 119/256 (46%), Gaps = 1/256 (0%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
H L L+ + + + ++ Y + ++ +AY +F++ P+R++ W +MI FA+ +
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWR 201
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
D L Y+KM ++ + P+++T+ L+ C + L R +H
Sbjct: 202 VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 145 XXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
+ Y K + +A ++F +D+V N+MI+GY+ G + ++LF M +P
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF 264
D T +G++S L+ G+ L + G S LV++ RF + A +
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELI 381
Query: 265 IGL-YQPDLVAWSALI 279
+ +P+ V W +L+
Sbjct: 382 ENMPMKPNSVIWGSLL 397
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 13/278 (4%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFT 208
Y V A KVF + ER++V AMISG++ L+L++ MR+ P+ +T
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRK-STSDPNDYT 223
Query: 209 LVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLY 268
L+S LG G+ +H L G ++ ++L++MY + + A+ +F
Sbjct: 224 FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS 283
Query: 269 QPDLVAWSALITGFLQCEDYKKAL-FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGT 327
D+V+W+++I G+ Q +A+ F + +G K D I +L + V+ G
Sbjct: 284 NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR 343
Query: 328 EIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR-NIVSYNSVISGLGLH 386
+ + HGL+ + S L+D+ + G + + + ENM + N V + S++ +H
Sbjct: 344 KFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVH 403
Query: 387 GLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV 424
G + EE L L+PD CA H L
Sbjct: 404 GDVWTGIRAAEERLM--LEPD--------CAATHVQLA 431
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 322 DVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVIS 381
D R G+ H L+ G S++ + S+L+ +Y G V VFE M RN+VS+ ++IS
Sbjct: 135 DFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMIS 194
Query: 382 GLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
G KL+ +M + P++ T + LL AC +G + G+ + + +
Sbjct: 195 GFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLH----- 249
Query: 442 PRTEHYIHI----VKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
+ Y+HI + + G+L++A+ + D W ++++ HG
Sbjct: 250 MGLKSYLHISNSLISMYCKCGDLKDAFR-IFDQFSNKDVVSWNSMIAGYAQHG 301
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/568 (23%), Positives = 264/568 (46%), Gaps = 44/568 (7%)
Query: 23 KQLHALIL-RSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
+Q+H+ ++ RS L F ++ FY + A +LF + + + WN +I +A
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306
Query: 82 AHKFDEALSFYAKML-RTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
++ +A + ++ + + PD+ T ++ C + DL + +H
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Query: 141 XXXXXXTA-YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREI 199
+ Y++F S A FS + +D++ NA++ ++ K Q N + +
Sbjct: 367 SVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSP---KQFQFLNLLHHL 423
Query: 200 GKQQP--DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGF---DCNAYVGSALVNMYSRF 254
+ D T++ L+ ++ +G + +HG +K+G + +G+AL++ Y++
Sbjct: 424 LNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKC 483
Query: 255 KCMNSAYGVFIGLYQ--------------------------------PDLVAWSALITGF 282
+ A+ +F+GL + DL WS ++ +
Sbjct: 484 GNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIY 543
Query: 283 LQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
+ +A+ +R + G + + + I +LL AQL + L + HGY++R GL +I
Sbjct: 544 AESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDI 602
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
+ L+D+Y KCG + VF++ R++V + ++++G +HG +A ++ M E
Sbjct: 603 RLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTES 662
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
+KPD ++ +L ACCHAGL++DG +I+ + + P E Y V L+ G L++
Sbjct: 663 NIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDD 722
Query: 463 AYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYAS 522
AY+FV + ++ IWG LL C + +L V+ L E V++SN+YA+
Sbjct: 723 AYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAA 782
Query: 523 DGRWDDVKRTRDNIVNVGARKMPGLSWI 550
D +W+ V R+ + +K G SW+
Sbjct: 783 DAKWEGVMELRNLMKKKEMKKPAGCSWL 810
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 200/451 (44%), Gaps = 24/451 (5%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYA-LNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
K +H+ I+++ L ++ ++ YA AY FD + + WN++I F++
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGC---HENFDLDGLRILHXXXXXXXXXXX 138
+ +A + ML+ T+P+ T A ++ C +N R +H
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT 261
Query: 139 XXXXXXXXTA-YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
+ Y + + EA+ +F+ + +DLV N +I+GY+ W K QLF+ +
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDC-NAYVGSALVNMYSRFKC 256
G PD T++ ++ + L G+ IH L+ + + VG+AL++ Y+RF
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381
Query: 257 MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKA---DPILIASL 313
++AY F + D+++W+A++ F D K F L +A D + I SL
Sbjct: 382 TSAAYWAFSLMSTKDIISWNAILDAF---ADSPKQFQFLNLLHHLLNEAITLDSVTILSL 438
Query: 314 LVASAQLTDVRLGTEIHGYVLRHGL---ESNIIVSSALIDMYLKCGFVGLGILVFENM-R 369
L + + E+HGY ++ GL E + +AL+D Y KCG V +F +
Sbjct: 439 LKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSE 498
Query: 370 NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQE 429
R +VSYNS++SG G A LF EM L + +CC + +E
Sbjct: 499 RRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFRE 558
Query: 430 IFRRMMDEFCIPPRTEHYIHIVKLLGMAGEL 460
I R M P T + I+ LL + +L
Sbjct: 559 IQARGMR-----PNT---VTIMNLLPVCAQL 581
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 177/388 (45%), Gaps = 10/388 (2%)
Query: 103 DNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVF 162
D+ + +++ C DL R LH Y+K + + K+F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 163 SGIFERDLVLCNAMISGYSY-CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSL 221
+ D V+ N +++G S CG + ++ F M + +P T ++ +
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGD 137
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFK-CMNSAYGVFIGLYQPDLVAWSALIT 280
G+ +H +K+G + + VG+ALV+MY++F AY F G+ D+V+W+A+I
Sbjct: 138 SYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIA 197
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD---VRLGTEIHGYVL-RH 336
GF + A + + + + IA++L A + R G +IH YV+ R
Sbjct: 198 GFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRS 257
Query: 337 GLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLF 396
L++++ V ++L+ YL+ G + +F M ++++VS+N VI+G + +AF+LF
Sbjct: 258 WLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLF 317
Query: 397 EEMLEKG-LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLG 455
++ KG + PD T+ +L C + G+EI ++ + T ++
Sbjct: 318 HNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYA 377
Query: 456 MAGELEEAYNFVLSLMQPVDSGIWGALL 483
G+ AY + SLM D W A+L
Sbjct: 378 RFGDTSAAY-WAFSLMSTKDIISWNAIL 404
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 178/415 (42%), Gaps = 8/415 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ LH + + S + +L YA + +F + +WN ++ + +
Sbjct: 41 RALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS 100
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ F A E KP + T+A ++ C D + +H
Sbjct: 101 CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVG 160
Query: 143 XXXXTAYSKFSHV-SEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
+ Y+KF + +A F GI ++D+V NA+I+G+S + F M +
Sbjct: 161 NALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK-EP 219
Query: 202 QQPDGFTLVGL--ISGLMDFSL-LGIGQGIHGLCL-KSGFDCNAYVGSALVNMYSRFKCM 257
+P+ T+ + + MD ++ G+ IH + +S + +V ++LV+ Y R +
Sbjct: 220 TEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRI 279
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK-KADPILIASLLVA 316
A +F + DLV+W+ +I G+ ++ KA + NL G D + I S+L
Sbjct: 280 EEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPV 339
Query: 317 SAQLTDVRLGTEIHGYVLRHG-LESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS 375
AQLTD+ G EIH Y+LRH L + V +ALI Y + G F M ++I+S
Sbjct: 340 CAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIIS 399
Query: 376 YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+N+++ Q L +L + + D T+ LL C + + +E+
Sbjct: 400 WNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEV 454
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 156/570 (27%), Positives = 265/570 (46%), Gaps = 48/570 (8%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALN-----DDLISAYNLFDKTPQRSIFLWNSMIRA 78
Q+H LI++S + F + ++ Y + DD++ LFD+ PQR + WN+++ +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL---KLFDEIPQRDVASWNTVVSS 258
Query: 79 FAKAHKFDEALSFYAKMLRTET-KPDNFTYACLIRGCHENFDLDGLRILH---------- 127
K K +A + +M R E D+FT + L+ C ++ L R LH
Sbjct: 259 LVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ 318
Query: 128 ---------------------XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIF 166
TAY F V A ++F+ +
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 167 ERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQ 226
E++ + NA+++G+ G K L+LF M + G + D F+L + S + +
Sbjct: 379 EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD-FSLTSAVDACGLVSEKKVSE 437
Query: 227 GIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL---VAWSALITGFL 283
IHG C+K G N + +AL++M +R + M A +F + +L A +++I G+
Sbjct: 438 QIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF-DQWPSNLDSSKATTSIIGGYA 496
Query: 284 QCEDYKKAL-FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
+ KA+ F+R L D + + +L L +G +IH Y L+ G S+I
Sbjct: 497 RNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDI 556
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
+ ++LI MY KC I +F MR +++S+NS+IS L +A L+ M EK
Sbjct: 557 SLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEK 616
Query: 403 GLKPDESTLSGLLCAC--CHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGEL 460
+KPD TL+ ++ A + + +++F M + I P TEHY V++LG G L
Sbjct: 617 EIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLL 676
Query: 461 EEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIY 520
EEA + + S+ + + ALL C +H NT +A+ V++ + +P + ++ SNIY
Sbjct: 677 EEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIY 736
Query: 521 ASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++ G W + R+ + G RK P SWI
Sbjct: 737 SASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 158/328 (48%), Gaps = 39/328 (11%)
Query: 147 TAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDG 206
+ Y K EA VF + +V A+ISG+S + L++F MR+ G QP+
Sbjct: 122 STYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNE 181
Query: 207 FTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF--KCMNSAYGVF 264
+T V +++ + S +G IHGL +KSGF + +V ++L+++Y + + +F
Sbjct: 182 YTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLF 241
Query: 265 IGLYQPDLVAWSALITGFLQCEDYKKAL-FFYRNLSVAGKKADPILIASLLVASAQLTDV 323
+ Q D+ +W+ +++ ++ KA FY V G D +++LL + + +
Sbjct: 242 DEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVL 301
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALI-------DM------------------------Y 352
G E+HG +R GL + V++ALI DM Y
Sbjct: 302 LRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAY 361
Query: 353 LKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
+ G V + +F N+ +N ++YN++++G +G +A KLF +ML++G++ + +L+
Sbjct: 362 MSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLT 421
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCI 440
+ AC GLV + + + FCI
Sbjct: 422 SAVDAC---GLVSEKK--VSEQIHGFCI 444
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 247/500 (49%), Gaps = 19/500 (3%)
Query: 57 AYNLFDKTPQRS-IFLWNSMIRAFAKAHKFDEALSFYAKMLRTET--KPDNFTYACLIRG 113
A LFD+ PQR FL NSMI+A+ + ++ ++ + Y + LR ET PDNFT+ L +
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALY-RDLRKETCFAPDNFTFTTLTKS 87
Query: 114 CHENFDL-DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVL 172
C + + GL+ LH Y+KF + A F + R V
Sbjct: 88 CSLSMCVYQGLQ-LHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVS 146
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLI-SGLMDFSLLGIGQGIHGL 231
A+ISGY CG +LF+ M + + G + SG M + + H
Sbjct: 147 WTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKT 206
Query: 232 CLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKA 291
+ + +++ Y K +++A +F + + +LV+W+ +I G+ Q + ++
Sbjct: 207 VI---------TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEG 257
Query: 292 LFFYRNLSVAGK-KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALID 350
+ ++ + D + I S+L A + + LG H +V R L+ + V +A++D
Sbjct: 258 IRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILD 317
Query: 351 MYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDEST 410
MY KCG + +F+ M + + S+N++I G L+G A A LF M+ + KPDE T
Sbjct: 318 MYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEIT 376
Query: 411 LSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL 470
+ ++ AC H GLV++G++ F +M E + + EHY +V LLG AG L+EA + + ++
Sbjct: 377 MLAVITACNHGGLVEEGRKWFH-VMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
Query: 471 MQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVK 530
+ I + LS C + + E AE + ++ + EP+ V+L N+YA+D RWDD
Sbjct: 436 PFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFG 495
Query: 531 RTRDNIVNVGARKMPGLSWI 550
++ + A+K G S I
Sbjct: 496 MVKNVMRKNQAKKEVGCSLI 515
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 166/384 (43%), Gaps = 11/384 (2%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
QLH+ I R + + +T ++ YA + A N FD+ P RS W ++I + +
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCG 158
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
+ D A + +M + D Y ++ G ++ D+ R L
Sbjct: 159 ELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIH 215
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
Y + A K+F + ER+LV N MI GY +G++LF M+
Sbjct: 216 ----GYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLD 271
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
PD T++ ++ + D L +G+ H + D V +A+++MYS+ + A +
Sbjct: 272 PDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRI 331
Query: 264 FIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
F + + + +W+A+I G+ + + AL + + + +K D I + +++ A V
Sbjct: 332 FDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLV 390
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-NRNIVSYNSVISG 382
G + + GL + I ++D+ + G + + NM N + +S +S
Sbjct: 391 EEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSA 450
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKP 406
G + +A ++ ++ +E L+P
Sbjct: 451 CGQYKDIERAERILKKAVE--LEP 472
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 244/515 (47%), Gaps = 6/515 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K +H+ I+ + T ++ FY+ + A + + + ++ +FLW S++ F +
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ EA+ + +M +P+NFTY+ ++ C LD + +H
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 143 XXXXTAYSKFSHVS-EASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM--REI 199
Y K S EAS+VF + ++V +I G GF L M RE+
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 200 GKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
+P+ TL G++ + IH L+ D VG++LV+ Y+ + ++
Sbjct: 424 ---EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDY 480
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
A+ V + + D + +++L+T F + ++ AL + G + D + + + ASA
Sbjct: 481 AWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASAN 540
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
L + G +H Y ++ G V ++L+DMY KCG + VFE + ++VS+N +
Sbjct: 541 LGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGL 600
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
+SGL +G + A FEEM K +PD T LL AC + L G E F+ M +
Sbjct: 601 VSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYN 660
Query: 440 IPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVS 499
I P+ EHY+H+V +LG AG LEEA V ++ ++ I+ LL C GN L E ++
Sbjct: 661 IEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMA 720
Query: 500 QQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRD 534
+ P A ++L+++Y G+ + ++TR+
Sbjct: 721 NKGLALAPSDPALYILLADLYDESGKPELAQKTRN 755
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 221/457 (48%), Gaps = 13/457 (2%)
Query: 44 ILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPD 103
+L Y D + +A LFD+ R++F W MI AF K+ +F ALS + +M+ + T P+
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 104 NFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFS 163
FT++ ++R C D+ +H YSK EA ++FS
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS 183
Query: 164 GIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLG 223
+ D + MIS W + LQ ++ M + G P+ FT V L+ G F L
Sbjct: 184 SLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG-VPPNEFTFVKLL-GASSFLGLE 241
Query: 224 IGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
G+ IH + G N + ++LV+ YS+F M A V + D+ W+++++GF+
Sbjct: 242 FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
+ K+A+ + + G + + +++L + + + G +IH ++ G E +
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 344 VSSALIDMYLKCGFVGL-GILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
V +AL+DMY+KC + VF M + N+VS+ ++I GL HG F L EM+++
Sbjct: 362 VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEI----FRRMMDEFCIPPRTEHYIHIVKLLGMAG 458
++P+ TLSG+L AC V+ EI RR +D + + +V +
Sbjct: 422 EVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS-----LVDAYASSR 476
Query: 459 ELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
+++ A+N + S M+ D+ + +L++ + G E+A
Sbjct: 477 KVDYAWNVIRS-MKRRDNITYTSLVTRFNELGKHEMA 512
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 228/517 (44%), Gaps = 25/517 (4%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
++H ++++ S + + Y+ A LF W MI + A
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
K+ EAL FY++M++ P+ FT+ L+ G L+ + +H
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVVLKT 263
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
YS+FS + +A +V + E+D+ L +++SG+ + + F MR +G Q
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG-LQ 322
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS---A 260
P+ FT ++S L G+ IH +K GF+ + VG+ALV+MY KC S A
Sbjct: 323 PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMY--MKCSASEVEA 380
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
VF + P++V+W+ LI G + + + + + + ++ +L A ++L
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
VR EIH Y+LR ++ ++V ++L+D Y V V +M+ R+ ++Y S++
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLV 500
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCI 440
+ G A + M G++ D+ +L G + A + G ++ G+ + C
Sbjct: 501 TRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL-------HCY 553
Query: 441 PPRT------EHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG--NT 492
++ +V + G LE+A + P D W L+S +G ++
Sbjct: 554 SVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP-DVVSWNGLVSGLASNGFISS 612
Query: 493 ELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDV 529
L+ ++ + EP + ++LS S+GR D+
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLS--ACSNGRLTDL 647
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%)
Query: 224 IGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
IG IH +K G N + + L+++Y + + +A +F + + AW+ +I+ F
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
+ +++ AL + + +G + +S++ + A L D+ G +HG V++ G E N +
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
V S+L D+Y KCG +F +++N + +S+ +IS L +A + + EM++ G
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 404 LKPDESTLSGLLCACCHAGL 423
+ P+E T LL A GL
Sbjct: 221 VPPNEFTFVKLLGASSFLGL 240
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 2/223 (0%)
Query: 3 VKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFD 62
V S +L+ +K R R ++HA +LR H+ E ++ YA + + A+N+
Sbjct: 428 VTLSGVLRACSKLRHVR-RVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIR 486
Query: 63 KTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDG 122
+R + S++ F + K + ALS M + D + I L+
Sbjct: 487 SMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALET 546
Query: 123 LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
+ LH YSK + +A KVF I D+V N ++SG +
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLAS 606
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIG 225
GF L F MR + + +PD T + L+S + L +G
Sbjct: 607 NGFISSALSAFEEMR-MKETEPDSVTFLILLSACSNGRLTDLG 648
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
R+G IH V++ GL N+ + + L+ +YLK + +F+ M +R + ++ +IS
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC-----------HAGLVKDGQE 429
A A LFEEM+ G P+E T S ++ +C H ++K G E
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE 156
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 266/538 (49%), Gaps = 14/538 (2%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+++H ++RS S IL YA +D L SA LFD+ +R + W+ +IR++ ++
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 83 HKFDEALSFYAKML-RTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXX-XXXXXXX 140
+ L + +M+ +T+PD T +++ C D+D R +H
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
YSK V A +VF R++V N++++G+ + + + L++F+ M +
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ-E 322
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
+ D T+V L+ F + IHG+ ++ G++ N S+L++ Y+ ++ A
Sbjct: 323 AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDA 382
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
V + D+V+ S +I+G +A+ + ++ + I + SLL A +
Sbjct: 383 GTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVS 439
Query: 321 TDVRLGTEIHGYVLRHGLESN-IIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
D+R HG +R L N I V ++++D Y KCG + + F+ + +NI+S+ +
Sbjct: 440 ADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVI 499
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
IS ++GL +A LF+EM +KG P+ T L AC H GLVK G IF+ M++E
Sbjct: 500 ISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED- 558
Query: 440 IPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG--IWGALLSCCDVHGNTEL--A 495
P +HY IV +L AGE++ A + +L + V +G WGA+LS C + +
Sbjct: 559 HKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITS 618
Query: 496 EIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
E+V++ L + EP + ++ S+ +A++ W+DV R + R + G S + G
Sbjct: 619 EVVAEVL-ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREG 675
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 175/381 (45%), Gaps = 7/381 (1%)
Query: 39 FYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRT 98
F I FY DL S FD R WN ++ +E L +++K+
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 99 ETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA 158
+P+ T +I C + DG +I H Y+ +S A
Sbjct: 122 GFEPNTSTLVLVIHACRSLW-FDGEKI-HGYVIRSGFCGISSVQNSILCMYADSDSLS-A 178
Query: 159 SKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMD 218
K+F + ERD++ + +I Y GL+LF M K +PD T+ ++
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 219 FSLLGIGQGIHGLCLKSGFD-CNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSA 277
+ +G+ +HG ++ GFD + +V ++L++MYS+ ++SA+ VF ++V+W++
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNS 298
Query: 278 LITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG 337
++ GF+ + Y +AL + + + D + + SLL IHG ++R G
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 338 LESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFE 397
ESN + S+LID Y C V V ++M +++VS +++ISGL G + +A +F
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFC 418
Query: 398 EMLEKGLKPDESTLSGLLCAC 418
M + P+ T+ LL AC
Sbjct: 419 HMRD---TPNAITVISLLNAC 436
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 23/246 (9%)
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
++ I S G W + + ++ ++ G Q D F + S L G I +
Sbjct: 13 SSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYM 72
Query: 234 KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALF 293
K G C+ F CMNS D V+W+ ++ G L ++ L+
Sbjct: 73 KCGDLCSGL---------REFDCMNSR----------DSVSWNVIVFGLLDYGFEEEGLW 113
Query: 294 FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYL 353
++ L V G +P +LV A + G +IHGYV+R G V ++++ MY
Sbjct: 114 WFSKLRVWG--FEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYA 171
Query: 354 KCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML-EKGLKPDESTLS 412
+ L F+ M R+++S++ VI KLF+EM+ E +PD T++
Sbjct: 172 DSDSLSARKL-FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVT 230
Query: 413 GLLCAC 418
+L AC
Sbjct: 231 SVLKAC 236
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 236/507 (46%), Gaps = 26/507 (5%)
Query: 48 YALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTY 107
Y N ++ A +FD P+R++ W ++++ + K D A S + KM + + ++
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSW 144
Query: 108 ACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE 167
++ G ++ +D L+ K V EA ++F + E
Sbjct: 145 TVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIH----GLCKEGRVDEAREIFDEMSE 200
Query: 168 RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQG 227
R ++ M++GY ++F+ M E T V S LM + G +
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMPE--------KTEVSWTSMLMGYVQNGRIED 252
Query: 228 IHGL----CLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
L +K CNA +++ + + A VF + + + +W +I
Sbjct: 253 AEELFEVMPVKPVIACNA-----MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHE 307
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
+ +AL + + G + + S+L A L + G ++H ++R + ++
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVY 367
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEM-LEK 402
V+S L+ MY+KCG + L+F+ +++I+ +NS+ISG HGL +A K+F EM L
Sbjct: 368 VASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSG 427
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
KP+E T L AC +AG+V++G +I+ M F + P T HY +V +LG AG E
Sbjct: 428 STKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNE 487
Query: 463 AYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYAS 522
A + S+ D+ +WG+LL C H ++AE +++L + EP ++LSN+YAS
Sbjct: 488 AMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYAS 547
Query: 523 DGRWDDVKRTRDNIVNVGARKMPGLSW 549
GRW DV R + RK PG SW
Sbjct: 548 QGRWADVAELRKLMKTRLVRKSPGCSW 574
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQ+HA ++R + + A+ ++ Y +L+ + +FD+ P + I +WNS+I +A
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 83 HKFDEALSFYAKM-LRTETKPDNFTYACLIRGC 114
+EAL + +M L TKP+ T+ + C
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC 443
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 182/366 (49%), Gaps = 28/366 (7%)
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
W GLQ+ +P+ + + L+ G+ IH GF N Y+
Sbjct: 99 LWSSGLQV----------EPETYAV--LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLK 146
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
L+ +Y+ DL+ W+A+I+G++Q ++ LF Y ++
Sbjct: 147 VKLLILYA----------------LSDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV 190
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILV 364
D AS+ A + L + G H +++ ++SNIIV SAL+DMY KC G V
Sbjct: 191 PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRV 250
Query: 365 FENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV 424
F+ + RN++++ S+ISG G HG ++ K FE+M E+G +P+ T +L AC H GLV
Sbjct: 251 FDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLV 310
Query: 425 KDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLS 484
G E F M ++ I P +HY +V LG AG L+EAY FV+ +WG+LL
Sbjct: 311 DKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLG 370
Query: 485 CCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKM 544
C +HGN +L E+ + + + +P G V+ +N YAS G + + R + N G +K
Sbjct: 371 ACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 430
Query: 545 PGLSWI 550
PG S I
Sbjct: 431 PGYSQI 436
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 4/190 (2%)
Query: 169 DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
DL+ NAMISGY G +GL ++ MR+ + PD +T + L G+
Sbjct: 157 DLIPWNAMISGYVQKGLEQEGLFIYYDMRQ-NRIVPDQYTFASVFRACSALDRLEHGKRA 215
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDY 288
H + +K N V SALV+MY + + + VF L +++ W++LI+G+
Sbjct: 216 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 275
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLR--HGLESNIIVSS 346
+ L + + G + +P+ +L A V G E H Y ++ +G+E +
Sbjct: 276 SEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYA 334
Query: 347 ALIDMYLKCG 356
A++D + G
Sbjct: 335 AMVDTLGRAG 344
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 18/207 (8%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
++ LLQE K + ++ K++HA + + + K+L YAL+D
Sbjct: 111 YAVLLQE-CKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSD------------ 157
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
+ WN+MI + + E L Y M + PD +T+A + R C L+ +
Sbjct: 158 ----LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 213
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
H Y K S S+ +VF + R+++ ++ISGY Y G
Sbjct: 214 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 273
Query: 185 FWGKGLQLFNGMREIG-KQQPDGFTLV 210
+ L+ F M+E G + P F +V
Sbjct: 274 KVSEVLKCFEKMKEEGCRPNPVTFLVV 300
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 215/436 (49%), Gaps = 38/436 (8%)
Query: 148 AYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGF 207
AY+ + + +F + DL L A I+ S G + L+ + + P+ F
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS-SEINPNEF 131
Query: 208 TLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSR-------------- 253
T L+ S G+ IH LK G + YV + LV++Y++
Sbjct: 132 TFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 254 -----------FKC------MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYR 296
C + +A +F + + D+V+W+ +I G+ Q AL ++
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 297 NLSVAGK-KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKC 355
L GK K D I + + L A +Q+ + G IH +V + N+ V + LIDMY KC
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 356 GFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLE-KGLKPDESTLSGL 414
G + +LVF + ++IV++N++I+G +HG + A +LF EM GL+P + T G
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 415 LCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPV 474
L AC HAGLV +G IF M E+ I P+ EHY +V LLG AG+L+ AY + ++
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 427
Query: 475 DSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRD 534
DS +W ++L C +HG+ L + +++ L + V+LSNIYAS G ++ V + R+
Sbjct: 428 DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRN 487
Query: 535 NIVNVGARKMPGLSWI 550
+ G K PG+S I
Sbjct: 488 LMKEKGIVKEPGISTI 503
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 174/457 (38%), Gaps = 72/457 (15%)
Query: 9 LQELTKSHQTRSRTKQLHALILRSHLSHESFYAT---KILRFYALNDDLISAYNLFDKTP 65
L L Q+ Q+HA ILR +L Y K+ R YA + + + LF +T
Sbjct: 32 LAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTI 91
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHEN-------- 117
+FL+ + I + D+A Y ++L +E P+ FT++ L++ C
Sbjct: 92 DPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTH 151
Query: 118 -------------------FDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA 158
+ G + T Y+K +V A
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211
Query: 159 SKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMD 218
+F + ERD+V N MI GY+ GF L LF + GK +PD T+V +S
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 219 FSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSAL 278
L G+ IH S N V + L++MYS+ + A VF + D+VAW+A+
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 331
Query: 279 ITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL 338
I G+ ++ G D + RL E+ G GL
Sbjct: 332 IAGY----------------AMHGYSQDAL---------------RLFNEMQGIT---GL 357
Query: 339 ESNIIVSSALIDMYLKCGFVGLGILVFENMRNR-----NIVSYNSVISGLGLHGLAAQAF 393
+ I + G V GI +FE+M I Y ++S LG G +A+
Sbjct: 358 QPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAY 417
Query: 394 KLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+ + M + D S +L +C G G+EI
Sbjct: 418 ETIKNM---NMDADSVLWSSVLGSCKLHGDFVLGKEI 451
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 150/363 (41%), Gaps = 72/363 (19%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
FSSLL KS T+S K +H +L+ L + + AT ++ YA D++SA +FD+
Sbjct: 133 FSSLL----KSCSTKS-GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 65 PQRS-------------------------------IFLWNSMIRAFAKAHKFDEALSFYA 93
P+RS I WN MI +A+ ++AL +
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 94 KML-RTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKF 152
K+L + KPD T + C + L+ R +H YSK
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 153 SHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGL 212
+ EA VF+ +D+V NAMI+GY+ G+ L+LFN M+ I QP T +G
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 213 ISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSR-FKCMNSAYGVFIGLYQPD 271
+ C +G LVN R F+ M YG+ +P
Sbjct: 368 LQA----------------CAHAG----------LVNEGIRIFESMGQEYGI-----KPK 396
Query: 272 LVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHG 331
+ + L++ + K+A +N+++ AD +L +S+L + D LG EI
Sbjct: 397 IEHYGCLVSLLGRAGQLKRAYETIKNMNM---DADSVLWSSVLGSCKLHGDFVLGKEIAE 453
Query: 332 YVL 334
Y++
Sbjct: 454 YLI 456
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 210/434 (48%), Gaps = 32/434 (7%)
Query: 147 TAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ-QPD 205
A S ++ A+++ + L N+MI + K + + G +PD
Sbjct: 48 VALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPD 107
Query: 206 GFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFI 265
+T+ L+ + G +HG+ ++ GFD + +V + L+++Y+ C++S + VF
Sbjct: 108 NYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFN 167
Query: 266 GLYQPDLV-------------------------------AWSALITGFLQCEDYKKALFF 294
+ PD V AW+A+I+G+ Q + ++AL
Sbjct: 168 SIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNV 227
Query: 295 YRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLK 354
+ + + G K + + + S+L A QL + G H Y+ R+ ++ + +++ L+D+Y K
Sbjct: 228 FHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAK 287
Query: 355 CGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGL 414
CG + + VF M +N+ +++S ++GL ++G + +LF M + G+ P+ T +
Sbjct: 288 CGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSV 347
Query: 415 LCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPV 474
L C G V +GQ F M +EF I P+ EHY +V L AG LE+A + + +
Sbjct: 348 LRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKP 407
Query: 475 DSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRD 534
+ +W +LL ++ N EL + S+++ + E V+LSNIYA WD+V R
Sbjct: 408 HAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQ 467
Query: 535 NIVNVGARKMPGLS 548
++ + G RK PG S
Sbjct: 468 SMKSKGVRKQPGCS 481
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 163/388 (42%), Gaps = 39/388 (10%)
Query: 18 TRSRTKQLHALILRSHLSHESFYATKILRFYALNDD--LISAYNLFDKTPQRSIFLWNSM 75
T +Q+HA + + ++ AL+D L A + D++ + ++F NSM
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 76 IRAFAKAHKFDEALSFYAKMLRT--ETKPDNFTYACLIRGC-----------------HE 116
IRA K+ +++ FY ++L + + KPDN+T L++ C
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRR 137
Query: 117 NFDLD-----GLRILHX---------XXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVF 162
FD D GL L+ TA ++ V A K+F
Sbjct: 138 GFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLF 197
Query: 163 SGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLL 222
G+ ERD + NAMISGY+ G + L +F+ M+ G + +G ++ ++S L
Sbjct: 198 EGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG-VKVNGVAMISVLSACTQLGAL 256
Query: 223 GIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGF 282
G+ H ++ + + LV++Y++ M A VF G+ + ++ WS+ + G
Sbjct: 257 DQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGL 316
Query: 283 LQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRH--GLES 340
+K L + + G + + S+L + + V G H +R+ G+E
Sbjct: 317 AMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEP 375
Query: 341 NIIVSSALIDMYLKCGFVGLGILVFENM 368
+ L+D+Y + G + + + + M
Sbjct: 376 QLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 5/230 (2%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
D++ A LF+ P+R WN+MI +A+ + EAL+ + M K + ++
Sbjct: 189 DVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 113 GCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVL 172
C + LD R H Y+K + +A +VF G+ E+++
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLC 232
++ ++G + GF K L+LF+ M++ G P+ T V ++ G + GQ H
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDG-VTPNAVTFVSVLRGCSVVGFVDEGQR-HFDS 366
Query: 233 LKSGFDCNAYVG--SALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALI 279
+++ F + LV++Y+R + A + + +P WS+L+
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 208/440 (47%), Gaps = 47/440 (10%)
Query: 158 ASKVFSGIFERDLVLCNAMISGYSYCGFWGK--GLQLFNGMREIGKQQPDGFTLVGLISG 215
A K+F+ + +R+ N +I G+S + LF M +P+ FT ++
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 216 LMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYS----------------------- 252
+ G+ IHGL LK GF + +V S LV MY
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 253 ----------------------RFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKK 290
R +A +F + Q +V+W+ +I+G+ +K
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 291 ALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALID 350
A+ +R + + + + + S+L A ++L + LG +H Y G+ + ++ SALID
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 351 MYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDEST 410
MY KCG + I VFE + N+++++++I+G +HG A A F +M + G++P +
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 411 LSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL 470
LL AC H GLV++G+ F +M+ + PR EHY +V LLG +G L+EA F+L++
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 471 MQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVK 530
D IW ALL C + GN E+ + V+ L D P V LSN+YAS G W +V
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 531 RTRDNIVNVGARKMPGLSWI 550
R + RK PG S I
Sbjct: 498 EMRLRMKEKDIRKDPGCSLI 517
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/504 (23%), Positives = 206/504 (40%), Gaps = 94/504 (18%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALND----DLISAYNLFDKTPQRSIFLWNSMIRAF 79
Q+HA+ ++S ++ A +ILRF A +D DL A+ +F++ PQR+ F WN++IR F
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 80 AKAHKFDEALS----FYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXX 135
+++ + D+AL FY M +P+ FT+ +++ C + + + +H
Sbjct: 101 SESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159
Query: 136 XXXXXXXXXXXTAYSKFSHVSEASKVF-SGIFERDLVLC--------------------- 173
Y + +A +F I E+D+V+
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 174 -----------------------NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLV 210
N MISGYS GF+ +++F M++ G +P+ TLV
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK-GDIRPNYVTLV 278
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP 270
++ + L +G+ +H SG + +GSAL++MYS+ + A VF L +
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
+++ WSA+I GF A+ + + AG + + +LL A + H
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS-----------H 387
Query: 331 GYVLRHGLE--SNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGL 388
G ++ G S ++ L I Y ++ LG GL
Sbjct: 388 GGLVEEGRRYFSQMVSVDGL---------------------EPRIEHYGCMVDLLGRSGL 426
Query: 389 AAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI 448
+A E +L +KPD+ LL AC G V+ G+ + +MD +P + Y+
Sbjct: 427 LDEA---EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMD--MVPHDSGAYV 481
Query: 449 HIVKLLGMAGELEEAYNFVLSLMQ 472
+ + G E L + +
Sbjct: 482 ALSNMYASQGNWSEVSEMRLRMKE 505
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 188/353 (53%), Gaps = 9/353 (2%)
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG-FDCNAYVGSALVNMYSRFKCMNSAYG 262
P T LI + +G+ IH +K+G F +++V + ++ +Y K + A
Sbjct: 11 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARK 70
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
VF + QPD+V W L+ G+++C + L +R + V G + D + + L A AQ+
Sbjct: 71 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGA 130
Query: 323 VRLGTEIHGYVLRHG-LESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVIS 381
+ G IH +V + +ES++ V +AL+DMY KCG + + VF+ + RN+ S+ ++I
Sbjct: 131 LAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIG 190
Query: 382 GLGLHGLAAQAFKLFEEM-LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCI 440
G +G A +A E + E G+KPD L G+L AC H G +++G+ + M + I
Sbjct: 191 GYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEI 250
Query: 441 PPRTEHYIHIVKLLGMAGELEEAYNFVLSL-MQPVDSGIWGALLSCCDVHGNTELAEIVS 499
P+ EHY IV L+ AG L++A N + + M+P+ S +WGALL+ C H N EL E+
Sbjct: 251 TPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLAS-VWGALLNGCRTHKNVELGELAV 309
Query: 500 QQLFD----NEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLS 548
+ L D N + A V LSNIY S R + + R I G RK PG S
Sbjct: 310 KNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 2/195 (1%)
Query: 23 KQLHALILRSHL-SHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
KQ+H ++++ + +S T +LR Y + L+ A +FD+ PQ + W+ ++ + +
Sbjct: 33 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVR 92
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
E L + +ML +PD F+ + C + L + +H
Sbjct: 93 CGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVF 152
Query: 142 XXXXXT-AYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y+K + A +VF + R++ A+I GY+ G+ K + +
Sbjct: 153 VGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERED 212
Query: 201 KQQPDGFTLVGLISG 215
+PD L+G+++
Sbjct: 213 GIKPDSVVLLGVLAA 227
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 208/419 (49%), Gaps = 44/419 (10%)
Query: 153 SHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM----REIGKQQ---PD 205
S ++ A VF+ I ++ + N +I G+S F + +F M + Q+ P
Sbjct: 72 SDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPS 131
Query: 206 GFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFI 265
F G + D G+ +HG+ +K G + ++++ + +++MY C+ A+ +F+
Sbjct: 132 VFKAYGRLGQARD------GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFL 185
Query: 266 GLYQPDLVAWSALITGFLQCE-------------------------------DYKKALFF 294
G+ D+VAW+++I GF +C +K AL
Sbjct: 186 GMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDM 245
Query: 295 YRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLK 354
+R + K D + SLL A A L G IH Y++R+ E N IV +ALIDMY K
Sbjct: 246 FREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK 305
Query: 355 CGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGL 414
CG + G+ VFE + + +NS+I GL +G +A LF E+ GL+PD + G+
Sbjct: 306 CGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGV 365
Query: 415 LCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPV 474
L AC H+G V E FR M +++ I P +HY +V +LG AG LEEA + ++
Sbjct: 366 LTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEE 425
Query: 475 DSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTR 533
D+ IW +LLS C GN E+A+ ++ L +P + V+LSN YAS G +++ R
Sbjct: 426 DTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQR 484
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 195/446 (43%), Gaps = 43/446 (9%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFY-ALNDDLISAYNL 60
S+ ++ L+ + T KQ+HA ++++ L ++ A+++L F A D+ AY +
Sbjct: 21 SLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLV 80
Query: 61 FDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKML--RTETKPDNFTYACLIRGCHENF 118
F + ++ F+WN++IR F+++ + A+S + ML KP TY + +
Sbjct: 81 FTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLG 140
Query: 119 DLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMIS 178
R LH Y + EA ++F G+ D+V N+MI
Sbjct: 141 QARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIM 200
Query: 179 GYSYCGFWGKGLQLFNGM----------------------------REIGKQ--QPDGFT 208
G++ CG + LF+ M RE+ ++ +PDGFT
Sbjct: 201 GFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFT 260
Query: 209 LVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLY 268
+V L++ G+ IH +++ F+ N+ V +AL++MY + C+ VF
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP 320
Query: 269 QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTE 328
+ L W+++I G ++A+ + L +G + D + +L A A +V E
Sbjct: 321 KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADE 380
Query: 329 IHGYVL-RHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-NRNIVSYNSVISG---L 383
+ ++ +E +I + ++++ G + + +NM + V ++S++S +
Sbjct: 381 FFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKI 440
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDES 409
G +A +A K K L PDE+
Sbjct: 441 GNVEMAKRAAKCL-----KKLDPDET 461
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 51/282 (18%)
Query: 226 QGIHGLCLKSGFDCNAYVGSALVNMYSRFKC-----MNSAYGVFIGLYQPDLVAWSALIT 280
+ IH +K+G + S ++ F C MN AY VF + + W+ +I
Sbjct: 42 KQIHASLIKTGLISDTVTASRVL----AFCCASPSDMNYAYLVFTRINHKNPFVWNTIIR 97
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADP--ILIASLLVASAQLTDVRLGTEIHGYVLRHGL 338
GF + + A+ + ++ + P + S+ A +L R G ++HG V++ GL
Sbjct: 98 GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157
Query: 339 ESNIIVSSALIDMYLKCG--------FVGL------------------GIL-----VFEN 367
E + + + ++ MY+ CG F+G+ G++ +F+
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217
Query: 368 MRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDG 427
M RN VS+NS+ISG +G A +F EM EK +KPD T+ LL AC + G + G
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 428 QEIFRRMMDEFCIPPRTE-HYIHIVKLLGM---AGELEEAYN 465
R + E+ + R E + I + L+ M G +EE N
Sbjct: 278 -----RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLN 314
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 205/405 (50%), Gaps = 11/405 (2%)
Query: 154 HVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM--REIGKQQPDGFTLVG 211
H AS +F I + + + MI S GL+ F M E P T
Sbjct: 62 HFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHF 121
Query: 212 LISGLMDFSLLGIGQGIHGLCLKSG-FDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP 270
LI + +G+ IH +K+G F + +V + ++ +Y K + A VF + QP
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP 181
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
D+V W L+ G+++C + L ++ + V G + D + + L A AQ+ + G IH
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 331 GYVLR-HGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLA 389
+V + +ES++ V +AL+DMY KCG + + VFE + RN+ S+ ++I G +G A
Sbjct: 242 EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYA 301
Query: 390 AQAFKLFEEM-LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI 448
+A + + E G+KPD L G+L AC H G +++G+ + M + I P+ EHY
Sbjct: 302 KKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYS 361
Query: 449 HIVKLLGMAGELEEAYNFVLSL-MQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFD--- 504
IV L+ AG L++A + + + M+P+ S +WGALL+ C H N EL E+ Q L D
Sbjct: 362 CIVDLMCRAGRLDDALDLIEKMPMKPLAS-VWGALLNGCRTHKNVELGELAVQNLLDLEK 420
Query: 505 -NEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLS 548
N + A V LSNIY S R + + R I G RK PG S
Sbjct: 421 GNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 174/381 (45%), Gaps = 13/381 (3%)
Query: 18 TRSRTKQLHALILRSHLSHESFYATKILRFY----ALNDDLISAYNLFDKTPQRSIFLWN 73
T + K H+L + L ++ +K+L + LN A ++FD + F+++
Sbjct: 23 TVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYD 82
Query: 74 SMIRAFAKAHKFDEALSFYAKMLRTETK---PDNFTYACLIRGCHEN-FDLDGLRILHXX 129
+MIR +++ + L ++ M++ E + P T+ LI C + F G +I
Sbjct: 83 TMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWV 142
Query: 130 XXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKG 189
Y + + +A KVF I + D+V + +++GY CG +G
Sbjct: 143 VKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEG 202
Query: 190 LQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGF-DCNAYVGSALV 248
L++F M G +PD F++ ++ L G+ IH K + + + +VG+ALV
Sbjct: 203 LEVFKEMLVRGI-EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALV 261
Query: 249 NMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVA-GKKADP 307
+MY++ C+ +A VF L + ++ +W+ALI G+ KKA + G K D
Sbjct: 262 DMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDS 321
Query: 308 ILIASLLVASAQLTDVRLG-TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFE 366
+++ +L A A + G T + R+G+ S ++D+ + G + + + E
Sbjct: 322 VVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIE 381
Query: 367 NMRNRNIVS-YNSVISGLGLH 386
M + + S + ++++G H
Sbjct: 382 KMPMKPLASVWGALLNGCRTH 402
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 109/271 (40%), Gaps = 7/271 (2%)
Query: 23 KQLHALILRSHL-SHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
KQ+H ++++ + + T +LR Y + L A +FD+ PQ + W+ ++ + +
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
E L + +ML +PD F+ + C + L + +H
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF 255
Query: 142 X-XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y+K + A +VF + R++ A+I GY+ G+ K + +
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERED 315
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQG-IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
+PD L+G+++ L G+ + + + G S +V++ R ++
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDD 375
Query: 260 AYGVFIGL-YQPDLVAWSALITGFLQCEDYK 289
A + + +P W AL+ G C +K
Sbjct: 376 ALDLIEKMPMKPLASVWGALLNG---CRTHK 403
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/564 (25%), Positives = 247/564 (43%), Gaps = 67/564 (11%)
Query: 48 YALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTY 107
+A +L A LF+ P++ + NS++ + +EAL + ++ D T
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITL 190
Query: 108 ACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE 167
+++ C E L + +H Y+K + AS + I E
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 168 RDLVLCNAMISGYSYCG------------------FWG-------------KGLQLFNGM 196
D +A+ISGY+ CG W + L LFN M
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM 310
Query: 197 REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSR--- 253
R + + D TL +I+ + L G+ +H K G + V S L++MYS+
Sbjct: 311 R--NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGS 368
Query: 254 --------------------------FKC--MNSAYGVFIGLYQPDLVAWSALITGFLQC 285
F C ++ A VF + L++W+++ GF Q
Sbjct: 369 PMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQN 428
Query: 286 EDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVS 345
+ L ++ + D + ++S++ A A ++ + LG ++ GL+S+ +VS
Sbjct: 429 GCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVS 488
Query: 346 SALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLK 405
S+LID+Y KCGFV G VF+ M + V +NS+ISG +G +A LF++M G++
Sbjct: 489 SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIR 548
Query: 406 PDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYN 465
P + T +L AC + GLV++G+++F M + P EH+ +V LL AG +EEA N
Sbjct: 549 PTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN 608
Query: 466 FVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGR 525
V + VD +W ++L C +G + + ++++ + EP V LS I+A+ G
Sbjct: 609 LVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGD 668
Query: 526 WDDVKRTRDNIVNVGARKMPGLSW 549
W+ R + K PG SW
Sbjct: 669 WESSALVRKLMRENNVTKNPGSSW 692
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 214/487 (43%), Gaps = 108/487 (22%)
Query: 12 LTKSHQTRSRT---KQLHALILRS-HLSHESFYATKILRFYALNDDLISAYNLFDKTPQR 67
L +S +R+R +Q + L+L+ LS A +L+ Y+ + + A NLFD+ P R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
+ F WN+MI + + + +L F+ M + D +++ ++ G
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMM----PERDGYSWNVVVSG-------------- 133
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWG 187
++K +S A ++F+ + E+D+V N+++ GY G+
Sbjct: 134 ---------------------FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAE 172
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
+ L+LF + D TL ++ + L G+ IH L G +C++ + S+L
Sbjct: 173 EALRLFKEL----NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 248 VNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQC--EDYKKALFFYR--------N 297
VN+Y++ + A + + +PD + SALI+G+ C + + LF + N
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWN 288
Query: 298 LSVAG--------------------KKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG 337
++G + D +A+++ A L + G ++H + + G
Sbjct: 289 SMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFG 348
Query: 338 LESNIIVSSALIDMYLKCG--------------------------FVGLGIL-----VFE 366
L +I+V+S L+DMY KCG + G + VFE
Sbjct: 349 LIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE 408
Query: 367 NMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKD 426
+ N++++S+NS+ +G +G + + F +M + L DE +LS ++ AC ++
Sbjct: 409 RIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLEL 468
Query: 427 GQEIFRR 433
G+++F R
Sbjct: 469 GEQVFAR 475
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/535 (24%), Positives = 245/535 (45%), Gaps = 44/535 (8%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTP-QRSIFLWNSMIRAF 79
R +Q+H +++ + +L YA + A LF+ +++ W SM+ +
Sbjct: 143 RGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGY 202
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI---LHXXXXXXXXX 136
++ +A+ + + R + + +T+ ++ C + R+ +H
Sbjct: 203 SQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACA---SVSACRVGVQVHCCIVKSGFK 259
Query: 137 XXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM 196
Y+K + A + G+ D+V N+MI G G G+ L +F M
Sbjct: 260 TNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Query: 197 REIGKQQPDGFTLVGLISGL-MDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFK 255
E + D FT+ +++ + + + I H L +K+G+ V +ALV+MY++
Sbjct: 320 HE-RDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRG 378
Query: 256 CMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLV 315
M+SA VF G+ + D+++W+AL+TG Y +AL + N+ V G D I+ AS+L
Sbjct: 379 IMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Query: 316 ASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS 375
ASA+LT + G ++HG ++ G S++ V+++L+ MY KCG + ++F +M R++++
Sbjct: 439 ASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLIT 498
Query: 376 YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM 435
+ +I G +G L++D Q F M
Sbjct: 499 WTCLIVGYAKNG-----------------------------------LLEDAQRYFDSMR 523
Query: 436 DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
+ I P EHY ++ L G +G+ + + + D+ +W A+L+ HGN E
Sbjct: 524 TVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENG 583
Query: 496 EIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
E ++ L + EP V LSN+Y++ GR D+ R + + K PG SW+
Sbjct: 584 ERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWV 638
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 225/478 (47%), Gaps = 10/478 (2%)
Query: 8 LLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQR 67
LL +L+KS + + + R + F ++ Y+ + L A LF P +
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPER-----DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVK 88
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
+ WN++I + K+ EA + + +M KP+ +T ++R C L +H
Sbjct: 89 NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIH 148
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIF-ERDLVLCNAMISGYSYCGFW 186
Y++ +SEA +F + E++ V +M++GYS GF
Sbjct: 149 GHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFA 208
Query: 187 GKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSA 246
K ++ F +R G Q + +T +++ S +G +H +KSGF N YV SA
Sbjct: 209 FKAIECFRDLRREGNQS-NQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSA 267
Query: 247 LVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKAD 306
L++MY++ + M SA + G+ D+V+W+++I G ++ +AL + + K D
Sbjct: 268 LIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKID 327
Query: 307 PILIASLLVASA-QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF 365
I S+L A T++++ + H +++ G + +V++AL+DMY K G + + VF
Sbjct: 328 DFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVF 387
Query: 366 ENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVK 425
E M ++++S+ ++++G +G +A KLF M G+ PD+ + +L A L++
Sbjct: 388 EGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLE 447
Query: 426 DGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALL 483
GQ++ + P +V + G LE+A N + + M+ D W L+
Sbjct: 448 FGQQVHGNYIKS-GFPSSLSVNNSLVTMYTKCGSLEDA-NVIFNSMEIRDLITWTCLI 503
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 120/257 (46%), Gaps = 13/257 (5%)
Query: 240 NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
+ + + ++ YS + ++ A +F + ++W+ALI+G+ + +A + +
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
G K + + S+L L + G +IHG+ ++ G + ++ V + L+ MY +C +
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 360 LGILVFENMR-NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
+FE M +N V++ S+++G +G A +A + F ++ +G + ++ T +L AC
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 419 CHAGLVKDGQEIFRRMMDEFCIPP---RTEHYIH--IVKLLGMAGELEEAYNFVLSLMQP 473
+ G ++ CI +T Y+ ++ + E+E A +L M+
Sbjct: 238 ASVSACRVGVQV------HCCIVKSGFKTNIYVQSALIDMYAKCREMESA-RALLEGMEV 290
Query: 474 VDSGIWGALLSCCDVHG 490
D W +++ C G
Sbjct: 291 DDVVSWNSMIVGCVRQG 307
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 192/353 (54%), Gaps = 5/353 (1%)
Query: 200 GKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNS 259
G +PD L S IG+ +H L +K+G+D + +VGS+LV+MY++ +
Sbjct: 110 GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY 169
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
A +F + Q ++V WS ++ G+ Q + ++AL+ ++ + +S++ A
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCAN 229
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
T + LG +IHG ++ +S+ V S+L+ +Y KCG VF + +N+ +N++
Sbjct: 230 STLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAM 289
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
+ H + +LF+ M G+KP+ T +L AC HAGLV +G+ F + M E
Sbjct: 290 LKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQ-MKESR 348
Query: 440 IPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVD--SGIWGALLSCCDVHGNTELAEI 497
I P +HY +V +LG AG L+EA + ++ P+D +WGALL+ C VH NTELA
Sbjct: 349 IEPTDKHYASLVDMLGRAGRLQEALEVITNM--PIDPTESVWGALLTSCTVHKNTELAAF 406
Query: 498 VSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+ ++F+ P + LSN YA+DGR++D + R + + G +K GLSW+
Sbjct: 407 AADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWV 459
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 130/269 (48%), Gaps = 2/269 (0%)
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
G +HG +KSG V + L+N YS+ + + F Q WS++I+ F Q
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIV 344
E +L F + + + D ++ S + A L+ +G +H ++ G ++++ V
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
S+L+DMY KCG + +F+ M RN+V+++ ++ G G +A LF+E L + L
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAY 464
++ + S ++ C ++ L++ G++I + + + +V L G E AY
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQI-HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 465 NFVLSLMQPVDSGIWGALLSCCDVHGNTE 493
V + + + GIW A+L H +T+
Sbjct: 273 Q-VFNEVPVKNLGIWNAMLKAYAQHSHTQ 300
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 168/366 (45%), Gaps = 3/366 (0%)
Query: 5 FSSLLQELTKSHQTRSRTK--QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFD 62
++ + L S +TRS K QLH +++S LS A ++ FY+ + + F+
Sbjct: 15 YNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFE 74
Query: 63 KTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDG 122
+PQ+S W+S+I FA+ +L F KM+ +PD+ + C D
Sbjct: 75 DSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDI 134
Query: 123 LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
R +H Y+K + A K+F + +R++V + M+ GY+
Sbjct: 135 GRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQ 194
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
G + L LF + ++ +IS + +LL +G+ IHGL +KS FD +++
Sbjct: 195 MGENEEALWLFKEAL-FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAG 302
VGS+LV++YS+ AY VF + +L W+A++ + Q +K + ++ + ++G
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 303 KKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGI 362
K + I ++L A + V G + +E ++L+DM + G + +
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEAL 373
Query: 363 LVFENM 368
V NM
Sbjct: 374 EVITNM 379
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 5/277 (1%)
Query: 8 LLQELTKSHQTRSRT---KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
+L TKS SR + +H L +++ + F + ++ YA +++ A +FD+
Sbjct: 118 VLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEM 177
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
PQR++ W+ M+ +A+ + +EAL + + L ++++++ +I C + L+ R
Sbjct: 178 PQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGR 237
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
+H + YSK A +VF+ + ++L + NAM+ Y+
Sbjct: 238 QIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHS 297
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
K ++LF M+ G +P+ T + +++ L+ G+ +S +
Sbjct: 298 HTQKVIELFKRMKLSG-MKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHY 356
Query: 245 SALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALIT 280
++LV+M R + A V + P W AL+T
Sbjct: 357 ASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 186/327 (56%), Gaps = 12/327 (3%)
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCED 287
+H + G ++ + + L++ YS+ + SAY +F + D+ +W+ALI G +
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 288 YKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEI-HGYVLRHGLESNIIVSS 346
+A+ Y+ + G + + + + L A + L DV+ G I HGY N+IVS+
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSN 245
Query: 347 ALIDMYLKCGFVGLGILVFENMR-NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLK 405
A IDMY KCGFV VFE +++V++N++I+G +HG A +A ++F+++ + G+K
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIK 305
Query: 406 PDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC--IPPRTEHYIHIVKLLGMAGELEEA 463
PD+ + L AC HAGLV+ G +F M C + +HY +V LL AG L EA
Sbjct: 306 PDDVSYLAALTACRHAGLVEYGLSVFNNMA---CKGVERNMKHYGCVVDLLSRAGRLREA 362
Query: 464 YNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASD 523
++ + S+ D +W +LL +++ + E+AEI S+++ + V+LSN+YA+
Sbjct: 363 HDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQ 422
Query: 524 GRWDDVKRTRDNIVNVGARKMPGLSWI 550
GRW DV R RD++ + +K+PGLS+I
Sbjct: 423 GRWKDVGRVRDDMESKQVKKIPGLSYI 449
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 131/309 (42%), Gaps = 11/309 (3%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAF 79
S QLH I R LS +S T +L Y+ N DLISAY LFD+ P R + WN++I
Sbjct: 126 SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGL 185
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDL-DGLRILHXXXXXXXXXXX 138
++ EA+ Y +M + T + C D+ +G I H
Sbjct: 186 VSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSN 245
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGIF-ERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
YSK V +A +VF ++ +V N MI+G++ G + L++F+ +
Sbjct: 246 AAIDM-----YSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
+ G +PD + + ++ L+ G + G + N +V++ SR +
Sbjct: 301 DNGI-KPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRL 359
Query: 258 NSAYGVFIGLYQ-PDLVAWSALITGFLQCEDYKKALFFYRNLSVAG--KKADPILIASLL 314
A+ + + PD V W +L+ D + A R + G D +L++++
Sbjct: 360 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 419
Query: 315 VASAQLTDV 323
A + DV
Sbjct: 420 AAQGRWKDV 428
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 13/274 (4%)
Query: 252 SRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNL------SVAGKKA 305
S F ++ A +F + +P W+A+I GF A +YR++ S A +
Sbjct: 48 SPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV 107
Query: 306 DPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF 365
D + + L A A+ ++H + R GL ++ ++ + L+D Y K G + +F
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 366 ENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVK 425
+ M R++ S+N++I+GL A++A +L++ M +G++ E T+ L AC H G VK
Sbjct: 168 DEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK 227
Query: 426 DGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSC 485
+G+ IF ++ I + + G +++AY W +++
Sbjct: 228 EGENIFHGYSNDNVIVSNA-----AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 486 CDVHGNTELAEIVSQQLFDN--EPRKGAYKVMLS 517
VHG A + +L DN +P +Y L+
Sbjct: 283 FAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALT 316
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 145/347 (41%), Gaps = 16/347 (4%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALND--DLISAYNLFDKTPQRSIFLWNSMIR 77
S+ KQL + L + SF +++L A++ DL A +F P+ WN++IR
Sbjct: 17 SQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIR 76
Query: 78 AFAKAHKFDEALSFYAKMLRTET------KPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
FA + A S+Y ML+ + + D T + ++ C + LH
Sbjct: 77 GFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQIN 136
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQ 191
AYSK + A K+F + RD+ NA+I+G + ++
Sbjct: 137 RRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAME 196
Query: 192 LFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI-HGLCLKSGFDCNAYVGSALVNM 250
L+ M G ++ + T+V + + G+ I HG + N V +A ++M
Sbjct: 197 LYKRMETEGIRRSE-VTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDM 250
Query: 251 YSRFKCMNSAYGVFIGLY-QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPIL 309
YS+ ++ AY VF + +V W+ +ITGF + +AL + L G K D +
Sbjct: 251 YSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVS 310
Query: 310 IASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG 356
+ L A V G + + G+E N+ ++D+ + G
Sbjct: 311 YLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAG 357
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 176/315 (55%), Gaps = 4/315 (1%)
Query: 240 NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL-FFYRNL 298
N +A+++ Y+R +++A +F + + D+ +W+A++ Q + +A+ F R +
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 299 SVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFV 358
+ + + + + +L A AQ ++L IH + R L S++ VS++L+D+Y KCG +
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 359 GLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLE---KGLKPDESTLSGLL 415
VF+ +++ ++NS+I+ LHG + +A +FEEM++ +KPD T GLL
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 416 CACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVD 475
AC H GLV G+ F M + F I PR EHY ++ LLG AG +EA + ++ D
Sbjct: 372 NACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKAD 431
Query: 476 SGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDN 535
IWG+LL+ C +HG+ +LAE+ + L P G Y M++N+Y G W++ +R R
Sbjct: 432 EAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKM 491
Query: 536 IVNVGARKMPGLSWI 550
I + A K PG S I
Sbjct: 492 IKHQNAYKPPGWSRI 506
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 177/428 (41%), Gaps = 51/428 (11%)
Query: 8 LLQELTKSHQTRSR----TKQLHALILRSHLSHESFYATKILRFYALND-DLISAYNLFD 62
LL + + ++SR KQ+ + ++ S LSH F K+LRF L +L A +FD
Sbjct: 22 LLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFD 81
Query: 63 KTPQRSIFLWNSMIRAFAKAHKF--DEALSFYAKML-RTETKPDNFTYACLIRGCHENFD 119
+ + L+ +++ A++ + A SF+ M+ R+ +P++F Y +++
Sbjct: 82 RFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSS 141
Query: 120 LDGLRILHXXXXXXXXXXXXXXXXXXXTAY-SKFSHVSEASKVFSGIFERDLVLCNAMIS 178
++H +Y S SH++ A ++F + ER++V AM+S
Sbjct: 142 AFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLS 201
Query: 179 GYSYCGFWGKGLQLFNGMRE-----------------------------IGKQ--QPDGF 207
GY+ G + LF M E I + +P+
Sbjct: 202 GYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEV 261
Query: 208 TLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL 267
T+V ++S L + +GIH + + +V ++LV++Y + + A VF
Sbjct: 262 TVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA 321
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYR---NLSVAGKKADPILIASLLVASAQLTDVR 324
+ L AW+++I F ++A+ + L++ K D I LL A V
Sbjct: 322 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVS 381
Query: 325 LGTEIHGY----VLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR-NIVSYNSV 379
G GY R G+E I LID+ + G + V M+ + + + S+
Sbjct: 382 KG---RGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSL 438
Query: 380 ISGLGLHG 387
++ +HG
Sbjct: 439 LNACKIHG 446
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 339 ESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEE 398
E N++ +A++ Y + G + + +FE+M R++ S+N++++ +GL +A LF
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRR 249
Query: 399 ML-EKGLKPDESTLSGLLCACCHAGLVKDGQEI----FRRMMDEFCIPPRTEHYIHIVKL 453
M+ E ++P+E T+ +L AC G ++ + I +RR + + +V L
Sbjct: 250 MINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNS-----LVDL 304
Query: 454 LGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQL 502
G G LEEA + V + W ++++C +HG +E A V +++
Sbjct: 305 YGKCGNLEEASS-VFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM 352
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 206/407 (50%), Gaps = 4/407 (0%)
Query: 147 TAYSKFSHVSEASKVFSGIFERDLV---LCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
T +S + A K+F + + L+ + AM GYS G L ++ M +
Sbjct: 175 TLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML-CSFIE 233
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
P F++ + +D L +G+GIH +K + V + L+ +Y + A V
Sbjct: 234 PGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKV 293
Query: 264 FIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
F G+ + ++V W++LI+ + + +R + + ++L A +++ +
Sbjct: 294 FDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAAL 353
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
G EIH +L+ + ++ + ++L+DMY KCG V VF+ M +++ S+N +++
Sbjct: 354 LTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCY 413
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
++G + LFE M+E G+ PD T LL C GL + G +F RM EF + P
Sbjct: 414 AINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPA 473
Query: 444 TEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLF 503
EHY +V +LG AG+++EA + ++ + IWG+LL+ C +HGN + EI +++LF
Sbjct: 474 LEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELF 533
Query: 504 DNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
EP VM+SNIYA WD+V + R+ + G +K G SW+
Sbjct: 534 VLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWV 580
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 162/378 (42%), Gaps = 23/378 (6%)
Query: 24 QLHALILRS-HLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIF---LWNSMIRAF 79
++ +LIL + L H +K++ +++ L A +FD S+ +W +M +
Sbjct: 152 KICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGY 211
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXX 139
++ +AL Y ML + +P NF+ + ++ C + DL R +H
Sbjct: 212 SRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQ 271
Query: 140 XXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREI 199
Y + +A KVF G+ ER++V N++IS S + LF M+E
Sbjct: 272 VVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE- 330
Query: 200 GKQQPDGF---TLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC 256
+ GF TL ++ + L G+ IH LKS + + ++L++MY +
Sbjct: 331 ---EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGE 387
Query: 257 MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
+ + VF + DL +W+ ++ + + ++ + + + +G D I +LL
Sbjct: 388 VEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSG 447
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSA------LIDMYLKCGFVGLGILVFENMRN 370
+ G +G L +++ VS A L+D+ + G + + V E M
Sbjct: 448 CSD-----TGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPF 502
Query: 371 RNIVS-YNSVISGLGLHG 387
+ S + S+++ LHG
Sbjct: 503 KPSASIWGSLLNSCRLHG 520
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 240/533 (45%), Gaps = 47/533 (8%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+ +HA ILR + S A +++ +L + ++F + +R+ F+ N++IR +
Sbjct: 46 RHVHAQILRRGVL-SSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTEN 104
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE-NFDLDGLRILHXXXXXXXXXXXXXX 141
+F+ ++ + MLR KPD T+ +++ + F G R LH
Sbjct: 105 ARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLG-RALHAATLKNFVDCDSFV 163
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
Y+K + A +VF +R +++ N +I+GY LF M
Sbjct: 164 RLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMP 223
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCM 257
E N+ S L+ Y +
Sbjct: 224 ER----------------------------------------NSGSWSTLIKGYVDSGEL 243
Query: 258 NSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVAS 317
N A +F + + ++V+W+ LI GF Q DY+ A+ Y + G K + IA++L A
Sbjct: 244 NRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Query: 318 AQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYN 377
++ + G IHGY+L +G++ + + +AL+DMY KCG + VF NM +++I+S+
Sbjct: 304 SKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWT 363
Query: 378 SVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
++I G +HG QA + F +M+ G KPDE +L AC ++ V G F M +
Sbjct: 364 AMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLD 423
Query: 438 FCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEI 497
+ I P +HY+ +V LLG AG+L EA+ V ++ D W AL C H AE
Sbjct: 424 YAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAES 483
Query: 498 VSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
VSQ L + +P + L +AS G DV++ R ++ + G S+I
Sbjct: 484 VSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYI 536
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 7/283 (2%)
Query: 21 RTKQLH--ALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRA 78
R K +H + RS S + +++ Y + +L A LF+ P++++ W ++I
Sbjct: 208 RAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLING 267
Query: 79 FAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDL-DGLRILHXXXXXXXXXX 137
F++ ++ A+S Y +ML KP+ +T A ++ C ++ L G+RI H
Sbjct: 268 FSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI-HGYILDNGIKL 326
Query: 138 XXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMR 197
Y+K + A+ VFS + +D++ AMI G++ G + + +Q F M
Sbjct: 327 DRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMM 386
Query: 198 EIGKQQPDGFTLVGLISGLMDFSLLGIGQG-IHGLCLKSGFDCNAYVGSALVNMYSRFKC 256
G ++PD + +++ ++ S + +G + L + +V++ R
Sbjct: 387 YSG-EKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGK 445
Query: 257 MNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKALFFYRNL 298
+N A+ + + PDL W+AL + Y++A +NL
Sbjct: 446 LNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNL 488
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 140/356 (39%), Gaps = 72/356 (20%)
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
+ PD + LI D + L + +H L+ G ++ V + LV+ S K + +
Sbjct: 24 QASPDESHFISLIHACKDTASL---RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYS 79
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
+F + + +ALI G + ++ ++ + + G K D + +L ++++L
Sbjct: 80 LSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL 139
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFE-------------- 366
LG +H L++ ++ + V +L+DMY K G + VFE
Sbjct: 140 GFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 367 ---------------------NMRNRNIVSYNSVISGLGLHGLAAQAFKLFE-------- 397
+M RN S++++I G G +A +LFE
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 398 -----------------------EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
EMLEKGLKP+E T++ +L AC +G + G I +
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI 319
Query: 435 MDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
+D R +V + GEL+ A V S M D W A++ VHG
Sbjct: 320 LDNGIKLDRAIG-TALVDMYAKCGELDCAAT-VFSNMNHKDILSWTAMIQGWAVHG 373
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 197/383 (51%), Gaps = 37/383 (9%)
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC--MNSA 260
+PD FT ++ + S + G+ IHG + GFD + +V + L+ MY F C + A
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMY--FSCGGLGDA 170
Query: 261 YGVFIGLYQPDL---------------------------------VAWSALITGFLQCED 287
+F + D+ V+W+ +I+G+ +
Sbjct: 171 RKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGR 230
Query: 288 YKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSA 347
+A+ ++ + + + D + + ++L A A L + LG I YV G+ + +++A
Sbjct: 231 ASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNA 290
Query: 348 LIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPD 407
+IDMY K G + + VFE + RN+V++ ++I+GL HG A+A +F M++ G++P+
Sbjct: 291 VIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 350
Query: 408 ESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFV 467
+ T +L AC H G V G+ +F M ++ I P EHY ++ LLG AG+L EA +
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 468 LSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWD 527
S+ ++ IWG+LL+ +VH + EL E +L EP ++L+N+Y++ GRWD
Sbjct: 411 KSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWD 470
Query: 528 DVKRTRDNIVNVGARKMPGLSWI 550
+ + R+ + +G +KM G S I
Sbjct: 471 ESRMMRNMMKGIGVKKMAGESSI 493
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 195/464 (42%), Gaps = 48/464 (10%)
Query: 14 KSHQTRSRT-KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLW 72
K H +T KQ H ++ + L+ ++ K + + L AY++F P + +L
Sbjct: 22 KIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLH 81
Query: 73 NSMIRAFA-----KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
N+MIRA + AH A++ Y K+ KPD FT+ +++ D+ R +H
Sbjct: 82 NTMIRALSLLDEPNAHSI--AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIH 139
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAM----------- 176
Y + +A K+F + +D+ + NA+
Sbjct: 140 GQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMD 199
Query: 177 ----------------------ISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLIS 214
ISGY+ G + +++F M + +PD TL+ ++S
Sbjct: 200 EARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRML-MENVEPDEVTLLAVLS 258
Query: 215 GLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVA 274
D L +G+ I G + + +A+++MY++ + A VF + + ++V
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 275 WSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVL 334
W+ +I G +AL + + AG + + + ++L A + + V LG + +
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 335 -RHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR-NIVSYNSVISGLGLHGLAAQA 392
++G+ NI +ID+ + G + V ++M + N + S+++ +H
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELG 438
Query: 393 FKLFEEMLEKGLKPDESTLSGLLCACCHAGLVK-DGQEIFRRMM 435
+ E+++ L+P+ S + +L A ++ L + D + R MM
Sbjct: 439 ERALSELIK--LEPNNSG-NYMLLANLYSNLGRWDESRMMRNMM 479
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 188/380 (49%)
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
N +I G+S + +N M +PD FT + + IHG +
Sbjct: 75 NYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVI 134
Query: 234 KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALF 293
+SGF +A V ++LV YS + A VF + DLV+W+ +I F + +AL
Sbjct: 135 RSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALS 194
Query: 294 FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYL 353
Y+ + G D + +LL + A ++ + +G +H ES + VS+ALIDMY
Sbjct: 195 MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 254
Query: 354 KCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSG 413
KCG + I VF MR R+++++NS+I G G+HG +A F +M+ G++P+ T G
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 314
Query: 414 LLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQP 473
LL C H GLVK+G E F M +F + P +HY +V L G AG+LE + + +
Sbjct: 315 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCH 374
Query: 474 VDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTR 533
D +W LL C +H N EL E+ ++L E V++++IY++ R
Sbjct: 375 EDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMR 434
Query: 534 DNIVNVGARKMPGLSWIGGG 553
I + + +PG SWI G
Sbjct: 435 KLIRSHDLQTVPGWSWIEIG 454
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 161/344 (46%), Gaps = 12/344 (3%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALN--DDLISA---YNLFDKTPQRSIFLWNSM 75
+ +++H+ ++ + L H +LRF A++ L A ++ FD P S WN +
Sbjct: 20 KLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSD--WNYL 77
Query: 76 IRAFAKAHKFDEALSFYAKMLRTE-TKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXX 134
IR F+ + ++ FY +ML + ++PD FT+ ++ C + +H
Sbjct: 78 IRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSG 137
Query: 135 XXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFN 194
YS V ASKVF + RDLV N MI +S+ G + L ++
Sbjct: 138 FLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYK 197
Query: 195 GMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF 254
M G D +TLV L+S S L +G +H + + +V +AL++MY++
Sbjct: 198 RMGNEG-VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKC 256
Query: 255 KCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLL 314
+ +A GVF G+ + D++ W+++I G+ +A+ F+R + +G + + I LL
Sbjct: 257 GSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL 316
Query: 315 VASAQLTDVRLGTEIHGYVL--RHGLESNIIVSSALIDMYLKCG 356
+ + V+ G E H ++ + L N+ ++D+Y + G
Sbjct: 317 LGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAG 359
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 7/260 (2%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
++H ++RS ++ AT ++R Y+ N + A +FD+ P R + WN MI F+
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
++ALS Y +M D++T L+ C L+ +LH
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSN 247
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
Y+K + A VF+G+ +RD++ N+MI GY G + + F M G +
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG-VR 306
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGI-HGLCLKSGFDCNAYVG--SALVNMYSRF-KCMNS 259
P+ T +GL+ G L + +G+ H + S F V +V++Y R + NS
Sbjct: 307 PNAITFLGLLLGCSHQGL--VKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 260 AYGVFIGLYQPDLVAWSALI 279
++ D V W L+
Sbjct: 365 LEMIYASSCHEDPVLWRTLL 384
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 166/284 (58%), Gaps = 4/284 (1%)
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRN-LSVAGKKADPILIASLLVASAQLTDVRLGTEI 329
+++ W+ +I G+++ Y++AL +N LS K + AS L A A+L D+ +
Sbjct: 128 NVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWV 187
Query: 330 HGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLA 389
H ++ G+E N I+SSAL+D+Y KCG +G VF +++ ++ +N++I+G HGLA
Sbjct: 188 HSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLA 247
Query: 390 AQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIH 449
+A ++F EM + + PD T GLL C H GL+++G+E F M F I P+ EHY
Sbjct: 248 TEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGA 307
Query: 450 IVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRK 509
+V LLG AG ++EAY + S+ D IW +LLS + N EL EI Q L ++ +
Sbjct: 308 MVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNL--SKAKS 365
Query: 510 GAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
G Y V+LSNIY+S +W+ ++ R+ + G RK G SW+ G
Sbjct: 366 GDY-VLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFG 408
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 57 AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLR-TETKPDNFTYACLIRGCH 115
A + +++ WN MI + + +++EAL ML T+ KP+ F++A + C
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 116 ENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNA 175
DL + +H Y+K + + +VF + D+ + NA
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 176 MISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKS 235
MI+G++ G + +++F+ M E PD T +GL++ LL G+ GL +
Sbjct: 237 MITGFATHGLATEAIRVFSEM-EAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGL-MSR 294
Query: 236 GFDCNAYVG--SALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKAL 292
F + A+V++ R + AY + + +PD+V W +L++ ++ +
Sbjct: 295 RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGE 354
Query: 293 FFYRNLSVAGKKADPILIASLLVASAQ 319
+NLS A K D +L++++ ++ +
Sbjct: 355 IAIQNLSKA-KSGDYVLLSNIYSSTKK 380
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 102/226 (45%), Gaps = 2/226 (0%)
Query: 158 ASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLM 217
A KV +++++ N MI GY + + L+ M +P+ F+ ++
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 218 DFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSA 277
L + +H L + SG + NA + SALV++Y++ + ++ VF + + D+ W+A
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 278 LITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRH- 336
+ITGF +A+ + + D I LL + + G E G + R
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 337 GLESNIIVSSALIDMYLKCGFVGLGILVFENMR-NRNIVSYNSVIS 381
++ + A++D+ + G V + E+M ++V + S++S
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 226/481 (46%), Gaps = 2/481 (0%)
Query: 74 SMIRAFAKAHKFDEALSFYAKM-LRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXX 132
S I ++F EA + + +R K TY L+ C + ++ ++
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 133 XXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQL 192
+ K + +A ++F I ER+L ++ISG+ G + + +L
Sbjct: 152 NGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 193 FNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYS 252
F M E + T ++ + +G+ +H LK G N +V L++MYS
Sbjct: 212 FKMMWE-ELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYS 270
Query: 253 RFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIAS 312
+ + A F + + VAW+ +I G+ ++AL ++ +G D ++
Sbjct: 271 KCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSI 330
Query: 313 LLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRN 372
++ S +L + L + H ++R+G ES I+ ++AL+D Y K G V VF+ + +N
Sbjct: 331 MIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKN 390
Query: 373 IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFR 432
I+S+N+++ G HG A KLFE+M+ + P+ T +L AC ++GL + G EIF
Sbjct: 391 IISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFL 450
Query: 433 RMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNT 492
M + I PR HY +++LLG G L+EA F+ +W ALL+ C + N
Sbjct: 451 SMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENL 510
Query: 493 ELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGG 552
EL +V+++L+ P K V++ N+Y S G+ + + + + G MP +W+
Sbjct: 511 ELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEV 570
Query: 553 G 553
G
Sbjct: 571 G 571
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 150/342 (43%), Gaps = 2/342 (0%)
Query: 22 TKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
K+++ ++ + E + +IL + +I A LFD+ P+R+++ + S+I F
Sbjct: 142 VKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVN 201
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
+ EA + M + + T+A ++R + + LH
Sbjct: 202 FGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFV 261
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
YSK + +A F + E+ V N +I+GY+ G+ + L L MR+ G
Sbjct: 262 SCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSG- 320
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
D FTL +I + L + + H +++GF+ +ALV+ YS++ +++A
Sbjct: 321 VSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTAR 380
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLT 321
VF L + ++++W+AL+ G+ A+ + + A + + ++L A A
Sbjct: 381 YVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSG 440
Query: 322 DVRLGTEIHGYVLR-HGLESNIIVSSALIDMYLKCGFVGLGI 362
G EI + HG++ + + +I++ + G + I
Sbjct: 441 LSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAI 482
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 204/402 (50%), Gaps = 19/402 (4%)
Query: 155 VSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLIS 214
++ A+KVF + E+++VL +MI+GY K L ++ ++ D +IS
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGY----LLNKDLVSARRYFDLSPER-DIVLWNTMIS 98
Query: 215 GLMDFSLLGIGQGIHGLCLKSGFDCNAYVG-SALVNMYSRFKCMNSAYGVFIGLYQPDLV 273
G ++ +G + L C + + ++ Y+ M + VF + + ++
Sbjct: 99 GYIE-----MGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 274 AWSALITGFLQCEDYKKALFFYRNL----SVAGKKADPILIASLLVASAQLTDVRLGTEI 329
+W+ LI G+ Q + L ++ + SV A L+ S A A+L G +
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLS---ACAKLGAFDFGKWV 210
Query: 330 HGYVLRHGLES-NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGL 388
H Y G ++ V +ALIDMY KCG + + + VF+ ++ R+++S+N++I+GL HG
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH 270
Query: 389 AAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI 448
+A LF EM G+ PD+ T G+LCAC H GLV+DG F M +F I P EH
Sbjct: 271 GTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCG 330
Query: 449 HIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPR 508
+V LL AG L +A F+ + D+ IW LL V+ ++ E+ ++L EPR
Sbjct: 331 CVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPR 390
Query: 509 KGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
A VMLSNIY GR+DD R + + + G +K G+SWI
Sbjct: 391 NPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWI 432
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 42 TKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETK 101
T ++ Y LN DL+SA FD +P+R I LWN+MI + + EA S + +M
Sbjct: 63 TSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM----PC 118
Query: 102 PDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKV 161
D ++ ++ G Y+ + +V
Sbjct: 119 RDVMSWNTVLEG-----------------------------------YANIGDMEACERV 143
Query: 162 FSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSL 221
F + ER++ N +I GY+ G + L F M + G P+ T+ ++S
Sbjct: 144 FDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGA 203
Query: 222 LGIGQGIHGLCLKSGFD-CNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALIT 280
G+ +H G++ + V +AL++MY + + A VF G+ + DL++W+ +I
Sbjct: 204 FDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 263
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
G +AL + + +G D + +L A + V G
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 227/485 (46%), Gaps = 36/485 (7%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+QLH +++ S T I+ Y + A +FD+ S WN ++R + +
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
DEA+ + KML +P N T + ++ C + L+ +++H
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 143 XXXXTAYSKFSHVSEASKVF--------------------SGIF-----------ERDLV 171
Y K + A +VF SG+ ER++V
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 172 LCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGL 231
NAM+ GY + W + L MR+ + D TLV +++ S + +G+ HG
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQ-EIENIDNVTLVWILNVCSGISDVQMGKQAHGF 420
Query: 232 CLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ-PDLVAWSALITGFLQCEDYKK 290
+ G+D N V +AL++MY + + SA F + + D V+W+AL+TG + ++
Sbjct: 421 IYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQ 480
Query: 291 ALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALID 350
AL F+ + V K + L A+LL A + + LG IHG+++R G + ++++ A++D
Sbjct: 481 ALSFFEGMQVEAKPSKYTL-ATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVD 539
Query: 351 MYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDEST 410
MY KC I VF+ R+++ +NS+I G +G + + F+LF + +G+KPD T
Sbjct: 540 MYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVT 599
Query: 411 LSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL 470
G+L AC G V+ G + F M ++ I P+ EHY +++L G L + F+ L
Sbjct: 600 FLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFL--L 657
Query: 471 MQPVD 475
+ P D
Sbjct: 658 LMPFD 662
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 188/417 (45%), Gaps = 45/417 (10%)
Query: 57 AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE 116
A LF++ P+R WN++I A A+ DE + +M R + ++A +++ C
Sbjct: 115 ARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGL 174
Query: 117 NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAM 176
DL LR LH Y K +S+A +VF I V N +
Sbjct: 175 ILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVI 234
Query: 177 ISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG 236
+ Y GF + + +F M E+ +P T+ ++ L +G+ IH + +K
Sbjct: 235 VRRYLEMGFNDEAVVMFFKMLELN-VRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLS 293
Query: 237 FDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL------------------------ 272
+ V +++ +MY + + SA VF DL
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 273 -------VAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRL 325
V+W+A++ G++ ++ +AL F + + D + + +L + ++DV++
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 326 GTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN-RNIVSYNSVISGLG 384
G + HG++ RHG ++N+IV++AL+DMY KCG + + F M R+ VS+N++++G+
Sbjct: 414 GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 385 LHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC-----------HAGLVKDGQEI 430
G + QA FE M + KP + TL+ LL C H L++DG +I
Sbjct: 474 RVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKI 529
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 143/317 (45%), Gaps = 22/317 (6%)
Query: 248 VNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADP 307
+ Y + C++ A +F + + D +W+A+IT Q + +R ++ G +A
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 308 ILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFEN 367
A +L + + D+RL ++H V+++G N+ + ++++D+Y KC + VF+
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 368 MRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDG 427
+ N + VS+N ++ G +A +F +MLE ++P T+S ++ AC + ++ G
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Query: 428 QEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCD 487
+ + + + + T + + LE A V + D W + +S
Sbjct: 283 K-VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARR-VFDQTRSKDLKSWTSAMSGYA 340
Query: 488 VHGNTELAEIVSQQLFDNEPRKG--AYKVMLSNIYASDGRWDD-------VKRTRDNIVN 538
+ G T A ++LFD P + ++ ML Y WD+ +++ +NI N
Sbjct: 341 MSGLTREA----RELFDLMPERNIVSWNAMLGG-YVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 539 VGARKMPGLSWIGGGCN 555
V L WI C+
Sbjct: 396 V------TLVWILNVCS 406
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 186/348 (53%), Gaps = 2/348 (0%)
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
PD ++L +I + +G+ +H + ++ GF + + S + +Y + +A V
Sbjct: 115 PDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKV 174
Query: 264 FIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
F + L +W+A+I G +A+ + ++ +G + D + S+ + L D+
Sbjct: 175 FDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDL 234
Query: 324 RLGTEIHGYVLRHGLE--SNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVIS 381
L ++H VL+ E S+I++ ++LIDMY KCG + L +FE MR RN+VS++S+I
Sbjct: 235 SLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIV 294
Query: 382 GLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
G +G +A + F +M E G++P++ T G+L AC H GLV++G+ F M EF +
Sbjct: 295 GYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELE 354
Query: 442 PRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQ 501
P HY IV LL G+L+EA V + + +WG L+ C+ G+ E+AE V+
Sbjct: 355 PGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPY 414
Query: 502 LFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSW 549
+ + EP V+L+N+YA G W DV+R R + K+P S+
Sbjct: 415 MVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 10/271 (3%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K+LH++ +R + F + + Y + +A +FD+ P+R + WN++I A
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHA 196
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHX--XXXXXXXXXXXX 140
+ +EA+ + M R+ +PD+FT + C DL LH
Sbjct: 197 GRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIM 256
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y K + AS +F + +R++V ++MI GY+ G + L+ F MRE G
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG--SALVNMYSRFKCMN 258
+P+ T VG++S + L+ G+ + +KS F+ + +V++ SR +
Sbjct: 317 -VRPNKITFVGVLSACVHGGLVEEGKTYFAM-MKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 259 SAYGVFIGL-YQPDLVAWSALITGFLQCEDY 288
A V + +P+++ W L+ G CE +
Sbjct: 375 EAKKVVEEMPMKPNVMVWGCLMGG---CEKF 402
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 270 PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEI 329
P W+ ++ +++ E A+ Y + + D + ++ A+ Q+ D LG E+
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 330 HGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLA 389
H +R G + S I +Y K G VF+ R + S+N++I GL G A
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 390 AQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
+A ++F +M GL+PD+ T+ + +C
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASC 228
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 220/443 (49%), Gaps = 44/443 (9%)
Query: 149 YSKFSHVSEASKVFSGI--FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDG 206
Y+ + A K+F I E+D V ++S +S G ++LF MR + + D
Sbjct: 53 YASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRR-KRVEIDD 111
Query: 207 FTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIG 266
++V L LG Q HG+ +K G + V +AL++MY + ++ +F
Sbjct: 112 VSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEE 171
Query: 267 LYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIA--------------- 311
L + +V+W+ ++ ++ E ++ + + A +++A
Sbjct: 172 LEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELL 231
Query: 312 -----------------SLLVASAQLTDVRLGTEIHGYVLRH----GLES---NIIVSSA 347
S+L A AQ ++ +G +H Y L+ G E+ +++V +A
Sbjct: 232 AEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTA 291
Query: 348 LIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPD 407
L+DMY KCG + + VF MR RN+V++N++ SGL +HG +F +M+ + +KPD
Sbjct: 292 LVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPD 350
Query: 408 ESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFV 467
+ T + +L AC H+G+V +G F + + + P+ +HY +V LLG AG +EEA +
Sbjct: 351 DLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILM 409
Query: 468 LSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWD 527
+ P + + G+LL C VHG E+AE + ++L P Y++++SN+Y ++GR D
Sbjct: 410 REMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSD 469
Query: 528 DVKRTRDNIVNVGARKMPGLSWI 550
R ++ G RK+PGLS I
Sbjct: 470 IADGLRGSLRKRGIRKIPGLSSI 492
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 176/423 (41%), Gaps = 46/423 (10%)
Query: 23 KQLHALILRSHL--SHESFYATKILRFYALNDDLISAYNLFDKTP--QRSIFLWNSMIRA 78
K+LHA++ S L + S+ + + +FYA + ++++A LFD+ P ++ W +++ +
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSS 85
Query: 79 FAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXX 138
F++ ++ + +M R + D+ + CL C + DL + H
Sbjct: 86 FSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTS 145
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGI-------------------------------FE 167
Y K VSE ++F + E
Sbjct: 146 VKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPE 205
Query: 168 RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQG 227
R+ V M++GY GF + L+L M + TL ++S L +G+
Sbjct: 206 RNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRW 265
Query: 228 IHGLCLK--------SGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALI 279
+H LK + +D + VG+ALV+MY++ ++S+ VF + + ++V W+AL
Sbjct: 266 VHVYALKKEMMMGEEASYD-DVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF 324
Query: 280 TGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLE 339
+G + + + + + K D + ++L A + V G + +GLE
Sbjct: 325 SGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLE 383
Query: 340 SNIIVSSALIDMYLKCGFVGLG-ILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEE 398
+ + ++D+ + G + IL+ E N V S++ +HG A ++ E
Sbjct: 384 PKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRE 443
Query: 399 MLE 401
+++
Sbjct: 444 LIQ 446
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 44/341 (12%)
Query: 220 SLLGIGQGIHGLCLKSGFD--CNAYVGSALVNMYSRFKCMNSAYGVF--IGLYQPDLVAW 275
S L G+ +H + SG +Y+ +AL Y+ M +A +F I L + D V W
Sbjct: 20 SFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDW 79
Query: 276 SALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLR 335
+ L++ F + ++ + + + D + + L A+L D+ + HG ++
Sbjct: 80 TTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVK 139
Query: 336 HGLESNIIVSSALIDMYLKCGFV-----------------------------GL--GILV 364
G+ +++ V +AL+DMY KCG V GL G V
Sbjct: 140 MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREV 199
Query: 365 FENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK-GLKPDESTLSGLLCACCHAGL 423
F M RN V++ +++G G + +L EM+ + G + TL +L AC +G
Sbjct: 200 FHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGN 259
Query: 424 VKDGQEIF------RRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG 477
+ G+ + MM E +V + G ++ + N V LM+ +
Sbjct: 260 LVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN-VFRLMRKRNVV 318
Query: 478 IWGALLSCCDVHGNTELA-EIVSQQLFDNEPRKGAYKVMLS 517
W AL S +HG + ++ Q + + +P + +LS
Sbjct: 319 TWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLS 359
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 201/379 (53%), Gaps = 7/379 (1%)
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
N + GYS + + +++ M+ G +P+ T L+ F L G+ I L
Sbjct: 82 NMLSRGYSSSDSPVESIWVYSEMKRRG-IKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 234 KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALF 293
K GFD + YVG+ L+++Y K + A VF + + ++V+W++++T + E+ K L
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV--ENGKLNLV 198
Query: 294 FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYL 353
F + GK+ P +++ SA ++ LG +H V+ LE N + +AL+DMY
Sbjct: 199 FECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYA 258
Query: 354 KCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML-EKGLKPDESTLS 412
K G + LVFE M ++N+ +++++I GL +G A +A +LF +M+ E ++P+ T
Sbjct: 259 KSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFL 318
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ 472
G+LCAC H GLV DG + F M I P HY +V +LG AG L EAY+F+ +
Sbjct: 319 GVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPF 378
Query: 473 PVDSGIWGALLSCCDVHGNTE---LAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDV 529
D+ +W LLS C +H + + + E V ++L + EP++ V+++N +A W +
Sbjct: 379 EPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEA 438
Query: 530 KRTRDNIVNVGARKMPGLS 548
R + +K+ G S
Sbjct: 439 AEVRRVMKETKMKKIAGES 457
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 162/369 (43%), Gaps = 10/369 (2%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALN--DDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
Q+H I S L ++SF ++++R +L+ DL A L + + WN + R ++
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSS 90
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
+ E++ Y++M R KP+ T+ L++ C L R +
Sbjct: 91 SDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYV 150
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
Y S+A KVF + ER++V N++++ G + F M IGK
Sbjct: 151 GNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEM--IGK 208
Query: 202 Q-QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
+ PD T+V L+S L +G+ +H + + N +G+ALV+MY++ + A
Sbjct: 209 RFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKAL-FFYRNLSVAGKKADPILIASLLVASAQ 319
VF + ++ WSA+I G Q ++AL F + + + + + + +L A +
Sbjct: 267 RLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSH 326
Query: 320 LTDVRLGTE-IHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR-NRNIVSYN 377
V G + H H ++ +I A++D+ + G + + M + V +
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWR 386
Query: 378 SVISGLGLH 386
+++S +H
Sbjct: 387 TLLSACSIH 395
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 2/193 (1%)
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLV--AWSALITGFLQC 285
IHG S ++++ S LV + S + A+ + L+ D W+ L G+
Sbjct: 32 IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSS 91
Query: 286 EDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVS 345
+ ++++ Y + G K + + LL A A + G +I VL+HG + ++ V
Sbjct: 92 DSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVG 151
Query: 346 SALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLK 405
+ LI +Y C VF+ M RN+VS+NS+++ L +G F+ F EM+ K
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC 211
Query: 406 PDESTLSGLLCAC 418
PDE+T+ LL AC
Sbjct: 212 PDETTMVVLLSAC 224
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 22/270 (8%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
+Q+ +L+ + + ++ Y A +FD+ +R++ WNS++ A +
Sbjct: 133 RQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
K + + +M+ PD T L+ C N L +++H
Sbjct: 193 GKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLG--KLVHSQVMVRELELNCRLG 250
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y+K + A VF + ++++ +AMI G + GF + LQLF+ M +
Sbjct: 251 TALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 203 QPDGFTLVGLI-----SGLMD-----FSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYS 252
+P+ T +G++ +GL+D F + I + + G A+V++
Sbjct: 311 RPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYG---------AMVDILG 361
Query: 253 RFKCMNSAYGVFIGL-YQPDLVAWSALITG 281
R +N AY + ++PD V W L++
Sbjct: 362 RAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 200/388 (51%), Gaps = 38/388 (9%)
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
+ PD T L+ + L +GQ H L G D + +V ++L+NMYS + SA
Sbjct: 57 RVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSA 116
Query: 261 YGVF--------------IGLY-----------------QPDLVAWSALITGFLQCEDYK 289
VF + Y + ++++WS LI G++ C YK
Sbjct: 117 QRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYK 176
Query: 290 KALFFYRNLSVAGK-----KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIV 344
+AL +R + + + + ++++L A +L + G +H Y+ ++ +E +I++
Sbjct: 177 EALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVL 236
Query: 345 SSALIDMYLKCGFVGLGILVFENM-RNRNIVSYNSVISGLGLHGLAAQAFKLFEEML-EK 402
+ALIDMY KCG + VF + +++ +Y+++I L ++GL + F+LF EM
Sbjct: 237 GTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD 296
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
+ P+ T G+L AC H GL+ +G+ F+ M++EF I P +HY +V L G +G ++E
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 463 AYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYAS 522
A +F+ S+ D IWG+LLS + G+ + E ++L + +P V+LSN+YA
Sbjct: 357 AESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAK 416
Query: 523 DGRWDDVKRTRDNIVNVGARKMPGLSWI 550
GRW +VK R + G K+PG S++
Sbjct: 417 TGRWMEVKCIRHEMEVKGINKVPGCSYV 444
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 122/306 (39%), Gaps = 39/306 (12%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
++ HA IL L + F T +L Y+ DL SA +FD + + + WNS++ A+AKA
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 83 -------------------------------HKFDEALSFYAKMLRTE-----TKPDNFT 106
K+ EAL + +M + +P+ FT
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 107 YACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI- 165
+ ++ C L+ + +H Y+K + A +VF+ +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 166 FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIG 225
++D+ +AMI + G + QLF+ M P+ T VG++ + L+ G
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 226 QGIHGLCLKS-GFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALITGFL 283
+ + ++ G + +V++Y R + A + +PD++ W +L++G
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 284 QCEDYK 289
D K
Sbjct: 382 MLGDIK 387
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 180/359 (50%), Gaps = 33/359 (9%)
Query: 224 IGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
+G +H +KS F N +VG AL++MY + ++ A +F + Q + V W+A+I+ +
Sbjct: 66 LGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYT 125
Query: 284 QCEDYK---------------------------------KALFFYRNLSVAGKKADPILI 310
C K +A+ FYR + K + I +
Sbjct: 126 HCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITL 185
Query: 311 ASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN 370
+L+ A + + RL EIH Y R+ +E + + S L++ Y +CG + LVF++M +
Sbjct: 186 LALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMED 245
Query: 371 RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
R++V+++S+IS LHG A A K F+EM + PD+ +L AC HAGL +
Sbjct: 246 RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVY 305
Query: 431 FRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHG 490
F+RM ++ + +HY +V +L G EEAY + ++ + + WGALL C +G
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 491 NTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSW 549
ELAEI +++L EP A V+L IY S GR ++ +R R + G + PG SW
Sbjct: 366 EIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 141/360 (39%), Gaps = 75/360 (20%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ------ 202
Y K VS A K+F I +R+ V+ NAMIS Y++CG + ++L+ M + +
Sbjct: 93 YGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAI 152
Query: 203 --------------------------QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSG 236
+P+ TL+ L+S + + IH ++
Sbjct: 153 IKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNL 212
Query: 237 FDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYR 296
+ + + S LV Y R + VF + D+VAWS+LI+ + D + AL ++
Sbjct: 213 IEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQ 272
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLR----HGLESNIIVSSALIDMY 352
+ +A D I ++L A + L E Y R +GL ++ S L+D+
Sbjct: 273 EMELAKVTPDDIAFLNVLKACSH---AGLADEALVYFKRMQGDYGLRASKDHYSCLVDVL 329
Query: 353 LKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
+ G FE +A+K+ + M E KP T
Sbjct: 330 SRVG-------RFE------------------------EAYKVIQAMPE---KPTAKTWG 355
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ 472
LL AC + G ++ + R ++ P +Y+ + K+ G EEA L + +
Sbjct: 356 ALLGACRNYGEIELAEIAARELL--MVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKE 413
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 114/306 (37%), Gaps = 53/306 (17%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
+HA ++S+ F +L Y + A LFD+ PQR+ +WN+MI + K
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 85 FDEA---------------------------------LSFYAKMLRTETKPDNFTYACLI 111
EA + FY KM+ KP+ T L+
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 112 RGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLV 171
C ++ +H AY + + VF + +RD+V
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 172 LCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLI-----SGLMDFSLLGIG- 225
+++IS Y+ G L+ F M E+ K PD + ++ +GL D +L+
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEM-ELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 226 -QGIHGL-CLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ-PDLVAWSALITGF 282
QG +GL K + C LV++ SR AY V + + P W AL+
Sbjct: 309 MQGDYGLRASKDHYSC-------LVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGA- 360
Query: 283 LQCEDY 288
C +Y
Sbjct: 361 --CRNY 364
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 233/507 (45%), Gaps = 26/507 (5%)
Query: 70 FLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXX 129
FLWN++I++ + +AL ML D F+ + +++ C + G +H
Sbjct: 80 FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGF 139
Query: 130 XXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKG 189
Y K + + ++F + +RD V N+MI GY CG
Sbjct: 140 LKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSA 199
Query: 190 LQLF-------------NGMREIGKQQPDGFTLVG-LISGLMDFSLLGIGQGIHGLC--- 232
+LF N M Q DG + L + + + L+ I G
Sbjct: 200 RELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHG 259
Query: 233 ----LKSGFDC----NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
K FD + + +++ Y++ ++ A +F + D+VA+++++ G++Q
Sbjct: 260 RIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 319
Query: 285 CEDYKKALFFYRNLSVAGKK-ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
+ + +AL + ++ D + +L A AQL + ++H Y++
Sbjct: 320 NKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGK 379
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
+ ALIDMY KCG + +LVFE + N++I +N++I GL +HGL AF + ++
Sbjct: 380 LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLS 439
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEA 463
LKPD+ T G+L AC H+GLVK+G F M + I PR +HY +V +L +G +E A
Sbjct: 440 LKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 499
Query: 464 YNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASD 523
N + + + IW L+ C H E E+V++ L + V+LSN+YAS
Sbjct: 500 KNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASF 559
Query: 524 GRWDDVKRTRDNIVNVGARKMPGLSWI 550
G W DV+R R + K+PG SWI
Sbjct: 560 GMWKDVRRVRTMMKERKIEKIPGCSWI 586
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 242/536 (45%), Gaps = 45/536 (8%)
Query: 20 SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAF 79
S +QLH + + + + ++RFY +D L A+ +FD+ P + WNS++ +
Sbjct: 72 SLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGY 131
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE-NFDLDGLRILHXXXXXXXXXXX 138
++ +F E + + ++ R++ P+ F++ + C + G I
Sbjct: 132 VQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGN 191
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE 198
Y K + +A VF + E+D V NA+++ S G GL F+ M
Sbjct: 192 VVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM-- 249
Query: 199 IGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMN 258
PD T LI +KSG N
Sbjct: 250 ---PNPDTVTYNELIDAF----------------VKSGD-------------------FN 271
Query: 259 SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
+A+ V + P+ +W+ ++TG++ E +A F+ + +G + D ++ +L A A
Sbjct: 272 NAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVA 331
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNS 378
L V G+ IH + GL+S ++V+SALIDMY KCG + L+F M +N++ +N
Sbjct: 332 ALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNE 391
Query: 379 VISGLGLHGLAAQAFKLFEEM-LEKGLKPDESTLSGLLCACCHAGLVKDGQ-EIFRRMMD 436
+ISG +G + +A KLF ++ E+ LKPD T LL C H + + F M++
Sbjct: 392 MISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMIN 451
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
E+ I P EH +++ +G GE+ +A + D W ALL C + + A+
Sbjct: 452 EYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAK 511
Query: 497 IVSQQLFD-NEPRKGAY-KVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V+ ++ + + K Y +++SN+YA RW +V + R + G K G SWI
Sbjct: 512 TVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 121/234 (51%), Gaps = 5/234 (2%)
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
++PD LV L+ ++ + + + +HG K GF N + ++L+ Y + A+
Sbjct: 51 EKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAH 110
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLT 321
VF + PD+++W++L++G++Q +++ + + L + + + L A A+L
Sbjct: 111 KVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLH 170
Query: 322 DVRLGTEIHGYVLRHGLES-NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
LG IH +++ GLE N++V + LIDMY KCGF+ +LVF++M ++ VS+N+++
Sbjct: 171 LSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV 230
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
+ +G F +M PD T + L+ A +G + ++ M
Sbjct: 231 ASCSRNGKLELGLWFFHQM----PNPDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 138/344 (40%), Gaps = 46/344 (13%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
W++++ A A+ L +++ KPD L+R + R LH
Sbjct: 24 WSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQ 191
Y + +A KVF + + D++ N+++SGY G + +G+
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 192 LFNGMREIGKQQ--PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFD-CNAYVGSALV 248
LF E+ + P+ F+ ++ L +G IH +K G + N VG+ L+
Sbjct: 143 LF---LELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLI 199
Query: 249 NMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPI 308
+MY + M+ A VF + + D V+W+A++ + + L+F+ + +P
Sbjct: 200 DMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM------PNP- 252
Query: 309 LIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENM 368
+ + + LID ++K G V +M
Sbjct: 253 --------------------------------DTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Query: 369 RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
N N S+N++++G + +A + F +M G++ DE +LS
Sbjct: 281 PNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLS 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLG 361
G+K D + LL S V L ++HGYV +HG SN +S++L+ Y +
Sbjct: 50 GEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDA 109
Query: 362 ILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHA 421
VF+ M + +++S+NS++SG G + LF E+ + P+E + + L AC
Sbjct: 110 HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARL 169
Query: 422 GLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGA 481
L G I +++ ++ + G G +++A V M+ D+ W A
Sbjct: 170 HLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAV-LVFQHMEEKDTVSWNA 228
Query: 482 LLSCCDVHGNTEL 494
+++ C +G EL
Sbjct: 229 IVASCSRNGKLEL 241
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 181/352 (51%), Gaps = 9/352 (2%)
Query: 203 QPDGFTLVGLISGL-MDFSLLGIGQGIHGLCLK--SGFDCNAYVGSALVNMYSRFKCMNS 259
+P+ FT L D G+ +H LK + + +V +ALV Y+ +
Sbjct: 109 RPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLRE 168
Query: 260 AYGVFIGLYQPDLVAWSALITGFLQCEDY---KKALFFYRNLSVAGKKADPILIASLLVA 316
A +F + +PDL W+ L+ + E+ ++ L + + V + + + + +L+ +
Sbjct: 169 ARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQV---RPNELSLVALIKS 225
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
A L + G H YVL++ L N V ++LID+Y KCG + VF+ M R++ Y
Sbjct: 226 CANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCY 285
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
N++I GL +HG + +L++ ++ +GL PD +T + AC H+GLV +G +IF M
Sbjct: 286 NAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKA 345
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
+ I P+ EHY +V LLG +G LEEA + + ++ +W + L HG+ E E
Sbjct: 346 VYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGE 405
Query: 497 IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLS 548
I + L E V+LSNIYA RW DV++TR+ + + K PG+S
Sbjct: 406 IALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 20/348 (5%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
KQ+HA I+ LSH ++ +K+L + L A ++ + P S+FL+N++I +
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHLSS-TVCLSYALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 83 HKFDE---ALSFYAKMLRTET---KPDNFTYACLIR--GCHENFDLDGLRILHXXXXXXX 134
H + A S Y ++L + + +P+ FTY L + G + G R LH
Sbjct: 85 HNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG-RALHAHVLKFL 143
Query: 135 XXXXXXXXXXXXTA--YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKG--- 189
Y+ + EA +F I E DL N +++ Y+
Sbjct: 144 EPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEV 203
Query: 190 LQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVN 249
L LF M + +P+ +LV LI + G H LK+ N +VG++L++
Sbjct: 204 LLLFMRM----QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLID 259
Query: 250 MYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPIL 309
+YS+ C++ A VF + Q D+ ++A+I G ++ + Y++L G D
Sbjct: 260 LYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSAT 319
Query: 310 IASLLVASAQLTDVRLGTEI-HGYVLRHGLESNIIVSSALIDMYLKCG 356
+ A + V G +I + +G+E + L+D+ + G
Sbjct: 320 FVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 234/489 (47%), Gaps = 15/489 (3%)
Query: 51 NDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACL 110
N L +A +LFD+ P+R + WN+MI + + + M R E +P FT++ L
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL 142
Query: 111 --IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER 168
+ C + G +I Y + A VF + +R
Sbjct: 143 ASLVTCVRH----GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 169 DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
D+V N +I S G L F MRE+ + QPD +T+ ++S D L G+
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREM-EIQPDEYTVSMVVSICSDLRELSKGKQA 257
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGF-LQC-- 285
LC+K GF N+ V A ++M+S+ ++ + +F L + D V +++I + C
Sbjct: 258 LALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCG 317
Query: 286 EDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVS 345
ED + SV + D +S+L +S + G ++H V++ G + + V+
Sbjct: 318 EDALRLFILAMTQSV---RPDKFTFSSVL-SSMNAVMLDHGADVHSLVIKLGFDLDTAVA 373
Query: 346 SALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML-EKGL 404
++L++MY K G V L + VF ++++ +N+VI GL + A ++ +F ++L + L
Sbjct: 374 TSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSL 433
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAY 464
KPD TL G+L ACC+AG V +G +IF M + P EHY I++LL G + EA
Sbjct: 434 KPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAK 493
Query: 465 NFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDG 524
+ + S IW +L G+T LAE V++ + ++EP+ ++L IY
Sbjct: 494 DIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTW 553
Query: 525 RWDDVKRTR 533
RW++ + R
Sbjct: 554 RWENSVKLR 562
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 17/272 (6%)
Query: 151 KFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLV 210
K +++ A +F + ERD+V N MISG CGF G+++F M+ + +P FT
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR-WEIRPTEFTFS 140
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFD-CNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ 269
L S + + + G+ IHG + SG N V +++++MY R + A VF+ +
Sbjct: 141 ILASLV---TCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMED 197
Query: 270 PDLVAWSALITGFLQCEDYKKA------LFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
D+V+W+ LI L C D + R + + + D ++ ++ + L ++
Sbjct: 198 RDVVSWNCLI---LSCSDSGNKEVALDQFWLMREMEI---QPDEYTVSMVVSICSDLREL 251
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
G + ++ G SN IV A IDM+ KC + + +F + + V NS+I
Sbjct: 252 SKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY 311
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL 415
H A +LF + + ++PD+ T S +L
Sbjct: 312 SWHCCGEDALRLFILAMTQSVRPDKFTFSSVL 343
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 253/531 (47%), Gaps = 6/531 (1%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
QLH L L++ ++ + ++ YA + +FD+ R + S+I + +
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG 127
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGL-RILHXXXXXXXXXXXXXXX 142
EA+ +M P + A L+ C + R+ H
Sbjct: 128 LLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLL 187
Query: 143 XXXXT-AYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
Y KF + A VF + ++ V AMISG + G+ LF M+
Sbjct: 188 STALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR-EN 246
Query: 202 QQPDGFTLVGLISGLMDFSL-LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
+P+ TL+ ++ ++ + + + IHG + G + + +A + MY R ++ +
Sbjct: 247 LRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLS 306
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
+F D+V WS++I+G+ + D + + + G +A+ + + +++ A
Sbjct: 307 RVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNS 366
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
T + + +H +L+ G S+I++ +ALIDMY KCG + VF + +++VS++S+I
Sbjct: 367 TLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMI 426
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCI 440
+ GLHG ++A ++F+ M++ G + D+ +L AC HAGLV++ Q IF + ++ +
Sbjct: 427 NAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ-AGKYHM 485
Query: 441 PPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA-EIVS 499
P EHY + LLG G++++A+ +++ + IW +LLS C+ HG ++A +I++
Sbjct: 486 PVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIA 545
Query: 500 QQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
+L +EP A V+LS I+ G + + R + K G S I
Sbjct: 546 NELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKI 596
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 182/405 (44%), Gaps = 5/405 (1%)
Query: 6 SSLLQELTKSHQTRSRTKQLHALILRSHLSHES-FYATKILRFYALNDDLISAYNLFDKT 64
+SLL T+ + + HAL+L ES +T ++ Y DD +A+++FD+
Sbjct: 152 ASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQM 211
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE-NFDLDGL 123
++ W +MI ++ + + M R +P+ T ++ C E N+ +
Sbjct: 212 EVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV 271
Query: 124 RILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYC 183
+ +H T Y + +VS + +F RD+V+ ++MISGY+
Sbjct: 272 KEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAET 331
Query: 184 GFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYV 243
G + + L N MR+ G + + TL+ ++S + +LL +H LK GF + +
Sbjct: 332 GDCSEVMNLLNQMRKEGI-EANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILL 390
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
G+AL++MY++ +++A VF L + DLV+WS++I + +AL ++ + G
Sbjct: 391 GNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGH 450
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
+ D + ++L A V I ++ + + + I++ + G +
Sbjct: 451 EVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFE 510
Query: 364 VFENMRNRNIVS-YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPD 407
V NM + ++S++S HG A K+ L K +PD
Sbjct: 511 VTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKS-EPD 554
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Query: 224 IGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
+G +H LCLK+G DC+ V ++L++MY++F + VF + D V++ ++I
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL-TDVRLGTEIHGYVL-RHGLESN 341
Q +A+ + + G L+ASLL ++ + ++ H VL ++ +
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLE 401
+++S+AL+DMYLK VF+ M +N VS+ ++ISG + LF M
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
Query: 402 KGLKPDESTLSGLLCAC 418
+ L+P+ TL +L AC
Sbjct: 245 ENLRPNRVTLLSVLPAC 261
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 122/302 (40%), Gaps = 12/302 (3%)
Query: 3 VKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFD 62
V S+L + + S K++H R + + Y ++ + LF+
Sbjct: 252 VTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFE 311
Query: 63 KTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDG 122
+ R + +W+SMI +A+ E ++ +M + + ++ T ++ C + L
Sbjct: 312 TSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSF 371
Query: 123 LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSY 182
+H Y+K +S A +VF + E+DLV ++MI+ Y
Sbjct: 372 ASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGL 431
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
G + L++F GM + G + D + ++S L+ Q I K
Sbjct: 432 HGHGSEALEIFKGMIK-GGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLE 490
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVA 301
+ +N+ RF ++ A+ V I + +P WS+L++ CE + + L VA
Sbjct: 491 HYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSA---CETHGR-------LDVA 540
Query: 302 GK 303
GK
Sbjct: 541 GK 542
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
Query: 279 ITGFLQCEDYKKALFFYR-NLSVAGKKADPILIASLLVASA-QLTDVRLGTEIHGYVLRH 336
+ G + + Y +AL Y+ + G ++ S++ A A Q LG ++H L+
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 337 GLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLF 396
G + + +VS++LI MY K VF+ M +R+ VSY S+I+ GL +A KL
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 397 EEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHI-VKLLG 455
+EM G P ++ LL C G +F ++ + R + + + L+
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALV---LVDERMQESVLLSTALVD 193
Query: 456 MAGELEE--AYNFVLSLMQPVDSGIWGALLSCCDVHGNTEL 494
M + ++ A V M+ + W A++S C + N E+
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEM 234
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 226/502 (45%), Gaps = 41/502 (8%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
DL+ F T +F W +MI +AL + KM P+ T +
Sbjct: 303 DLMQKMETFGITAD--VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS 360
Query: 113 GCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVL 172
C ++ +H YSK + +A KVF + +D+
Sbjct: 361 ACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT 420
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLC 232
N+MI+GY G+ GK +LF M++ +P+ T +ISG +
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQD-ANLRPNIITWNTMISGYIK-------------- 465
Query: 233 LKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL 292
N G A+ +++ R + G Q + W+ +I G++Q +AL
Sbjct: 466 -------NGDEGEAM-DLFQRME--------KDGKVQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 293 FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMY 352
+R + + + + I SLL A A L ++ EIHG VLR L++ V +AL D Y
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTY 569
Query: 353 LKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
K G + +F M ++I+++NS+I G LHG A LF +M +G+ P+ TLS
Sbjct: 570 AKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLS 629
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ 472
++ A G V +G+++F + +++ I P EH +V L G A LEEA F+ +
Sbjct: 630 SIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNI 689
Query: 473 PVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGR----WDD 528
++ IW + L+ C +HG+ ++A ++ LF EP A + ++S IYA + +
Sbjct: 690 QSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEG 749
Query: 529 VKRTRDNIVNVGARKMPGLSWI 550
K RDN++ +K G SWI
Sbjct: 750 NKPRRDNLL----KKPLGQSWI 767
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 243/521 (46%), Gaps = 44/521 (8%)
Query: 39 FYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRT 98
F TK+L YA + A +FD +R++F W++MI A+++ +++ E + M++
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 99 ETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA 158
PD+F + +++GC D++ +++H Y+K + A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 159 SKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMD 218
+K F + ERD++ N+++ Y G + ++L ++E+ K+ G+ GL+
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVEL---VKEMEKE--------GISPGLVT 284
Query: 219 FSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSAL 278
+++L G G C A +++ + + +G+ D+ W+A+
Sbjct: 285 WNILIGGYNQLGKC------------DAAMDLMQKME----TFGI-----TADVFTWTAM 323
Query: 279 ITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL 338
I+G + +AL +R + +AG + + I S + A + L + G+E+H ++ G
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 339 ESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEE 398
+++V ++L+DMY KCG + VF++++N+++ ++NS+I+G G +A++LF
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTR 443
Query: 399 MLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAG 458
M + L+P+ T + ++ G + ++F+RM + + T + I+ G
Sbjct: 444 MQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG 503
Query: 459 ELEEAYNFV----LSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKV 514
+ +EA S P I L +C ++ G + EI L N A K
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 515 MLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSW---IGG 552
L++ YA G D++ +R + +G ++W IGG
Sbjct: 564 ALTDTYAKSG---DIEYSR--TIFLGMETKDIITWNSLIGG 599
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 161/340 (47%), Gaps = 16/340 (4%)
Query: 208 TLVGLISGLMDFSLLGIGQGIHGLCLKSGF--DCNAYVGSALVNMYSRFKCMNSAYGVFI 265
T + L+ +D + +G+ +H + G + + +V + L++MY++ C+ A VF
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 266 GLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRL 325
+ + +L WSA+I + + +++ +R + G D L +L A DV
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 326 GTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGL 385
G IH V++ G+ S + VS++++ +Y KCG + F MR R+++++NSV+
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 386 HGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTE 445
+G +A +L +EM ++G+ P T + L+ G ++ ++ M+ F I
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQK-METFGITADVF 318
Query: 446 HYIHIVKLLGMAGELEEAYN----FVLSLMQPVDSGIWGALLSCC---DVHGNTELAEIV 498
+ ++ L G +A + L+ + P I A+ +C ++ +E+ I
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIA 378
Query: 499 SQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVN 538
+ F ++ G L ++Y+ G+ +D ++ D++ N
Sbjct: 379 VKMGFIDDVLVGNS---LVDMYSKCGKLEDARKVFDSVKN 415
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 152/605 (25%), Positives = 259/605 (42%), Gaps = 108/605 (17%)
Query: 26 HALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKF 85
H ++S + + + +++ Y+ + L A N+FD+ +R+++ WN++I A+ K +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 86 ---------------------------------DEALSFYAKMLRTETKP---DNFTYAC 109
EA+ + +M R E D+FT
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 110 LIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSG----- 164
+++ + ++ LH YSK E +F+G
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 165 ------------------------IFER-----DLVLCNAMISGYSYCGFWGKGLQLFNG 195
+F R D + N +I+GY+ G+ + L++
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 196 MREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFK 255
M E G + D + +++ L L IG+ +H LK+G N +V S +V++Y K
Sbjct: 251 MEENGLKW-DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYC--K 307
Query: 256 CMNSAYG---------------------------------VFIGLYQPDLVAWSALITGF 282
C N Y +F L + +LV W+A+ G+
Sbjct: 308 CGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY 367
Query: 283 LQCEDYKKALFFYRN-LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN 341
L L R ++ D +++ S+L A + + G EIHG+ LR G+ +
Sbjct: 368 LNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMD 427
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLE 401
+ +A +DMY KCG V +F++ R+ V YN++I+G HG A++F+ FE+M E
Sbjct: 428 KKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE 487
Query: 402 KGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELE 461
G KPDE T LL AC H GLV +G++ F+ M++ + I P T HY ++ L G A L+
Sbjct: 488 GGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLD 547
Query: 462 EAYNFVLSLMQ-PVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIY 520
+A + + Q D+ I GA L+ C + NTEL + V ++L E G+ + ++N Y
Sbjct: 548 KAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAY 607
Query: 521 ASDGR 525
AS R
Sbjct: 608 ASSAR 612
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/562 (26%), Positives = 255/562 (45%), Gaps = 61/562 (10%)
Query: 44 ILRFYA--LNDDLISAYNLF-----DKTPQRSIFLWNSM---------------IRAFAK 81
I+R Y N D+I+ +L P +IF WN M I+ K
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLD-GLRILHXXXXXXXXXXXXX 140
EAL ++ +M E +PD+ Y L+ + +++ G I
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVD 791
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
A + S V A K S + + N +I G+S K + ++ M G
Sbjct: 792 RNYML--AVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFG 849
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
PD T L+ S +G +H +KSG + + ++ + L++MY F+ SA
Sbjct: 850 -LLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 908
Query: 261 YG-------------------------------VFIGLYQPDLVAWSALITGFLQCEDYK 289
VF + + D+V WS++I G+++ +Y
Sbjct: 909 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 968
Query: 290 KAL-FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
KAL F + + + KA+ + + S++ A A L + G +H Y+L L +I+ ++L
Sbjct: 969 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSL 1028
Query: 349 IDMYLKCGFVGLGILVF--ENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKP 406
IDMY KCG +G VF +++ + + +N++I GL HG ++ +LF +M E + P
Sbjct: 1029 IDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDP 1088
Query: 407 DESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNF 466
DE T LL AC H GLVK+ F+ + E P++EHY +V +L AG +++A++F
Sbjct: 1089 DEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDF 1147
Query: 467 VLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRW 526
+ + + GALL+ C HGN ELAE V ++L + +P V L+N+YA + ++
Sbjct: 1148 ISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQF 1207
Query: 527 DDVKRTRDNIVNVGARKMPGLS 548
+ R+ + G +K+ G S
Sbjct: 1208 RAARSMREAMEKKGVKKIAGHS 1229
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 139/365 (38%), Gaps = 41/365 (11%)
Query: 33 HLSHESFYATKILRFYAL----NDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEA 88
+ H+ + + R Y L D+ AY K + WN +IR F+ + +++
Sbjct: 779 EMVHKGRFPVSVDRNYMLAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKS 838
Query: 89 LSFYAKMLRTETKPDNFTYACLIRGCHE--NFDLDGLRILHXXXXXXXXXXXXXXXXXXX 146
+S Y +MLR PD+ TY L++ N L G LH
Sbjct: 839 ISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGG--SLHCSVVKSGLEWDLFICNTLI 896
Query: 147 TAYSKFSHVSEASK-------------------------------VFSGIFERDLVLCNA 175
Y F + A K VF + ERD+V ++
Sbjct: 897 HMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSS 956
Query: 176 MISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKS 235
MI GY G + K L++F+ M +G + + T+V +I L G+ +H L
Sbjct: 957 MIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV 1016
Query: 236 GFDCNAYVGSALVNMYSRFKCMNSAYGVF--IGLYQPDLVAWSALITGFLQCEDYKKALF 293
+ ++L++MY++ + A+ VF + + D + W+A+I G +++L
Sbjct: 1017 HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQ 1076
Query: 294 FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYL 353
+ + + D I LL A + V+ + G E + ++D+
Sbjct: 1077 LFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLS 1136
Query: 354 KCGFV 358
+ G V
Sbjct: 1137 RAGLV 1141
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 16 HQTRSRTKQLHALILRSHLSHESFYA-TKILRFYALNDDLISAYNLFDKTPQRSIFLWNS 74
H S Q A L + H++ IL YA + D++SA +FD+ +R + W+S
Sbjct: 897 HMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSS 956
Query: 75 MIRAFAKAHKFDEALSFYAKMLRT-ETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXX 133
MI + K ++++AL + +M+R +K + T +I C L+ + +H
Sbjct: 957 MIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV 1016
Query: 134 XXXXXXXXXXXXXTAYSKFSHVSEASKVF--SGIFERDLVLCNAMISGYSYCGFWGKGLQ 191
Y+K + +A VF + + E D ++ NA+I G + GF + LQ
Sbjct: 1017 HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQ 1076
Query: 192 LFNGMREIGKQQPDGFTLVGLISG 215
LF+ MRE K PD T + L++
Sbjct: 1077 LFHKMRE-SKIDPDEITFLCLLAA 1099
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 272 LVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHG 331
+VA +A I G ++ E + L +R++ G D I L+ A + +
Sbjct: 579 MVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFN 638
Query: 332 YVLRHGLESNIIVSSALIDMYLKCGFVGLG----ILVFENMRNRNIVSYNSVISGLGLHG 387
++ GL+ + +++ID + K G + G + ++E+ +N ++++Y S+I GL G
Sbjct: 639 EMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASG 698
Query: 388 LAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
++A + EM K P+ T L+ C G + FR M ++ P
Sbjct: 699 RPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEP 752
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 208/435 (47%), Gaps = 38/435 (8%)
Query: 147 TAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDG 206
+ Y K V A KVF + ER++ NAMI GY G L +G+ E +
Sbjct: 8 SMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG----DAVLASGLFEEISVCRNT 63
Query: 207 FTLVGLISGL---------------MDFSL---------LGIGQGIHGLCLKSGF----- 237
T + +I G M F L LG+ + F
Sbjct: 64 VTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIP 123
Query: 238 DCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRN 297
+ NA+V S +++ Y R ++ A +F ++ DLV W+ LI G+ Q A+ + N
Sbjct: 124 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 183
Query: 298 LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGF 357
+ G + D + ++S+L A AQ + +G E+H + G+E N VS+ALIDMY KCG
Sbjct: 184 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 243
Query: 358 VGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCA 417
+ VFE++ R++ NS+IS L +HG +A ++F M LKPDE T +L A
Sbjct: 244 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 303
Query: 418 CCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSG 477
C H G + +G +IF M + + P +H+ ++ LLG +G+L+EAY V + +
Sbjct: 304 CVHGGFLMEGLKIFSEMKTQD-VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDT 362
Query: 478 IWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYK----VMLSNIYASDGRWDDVKRTR 533
+ GALL C VH +TE+AE V + + +Y +SN+YA RW + R
Sbjct: 363 VLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALR 422
Query: 534 DNIVNVGARKMPGLS 548
+ G K PGLS
Sbjct: 423 VEMEKRGLEKSPGLS 437
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 28/279 (10%)
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVA- 301
VGS+L++MY + C+ SA VF + + ++ W+A+I G++ D A + +SV
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR 61
Query: 302 ------------GKKADPILIASLL------VASAQLTDVRLGTEIHGYVLRHGL----- 338
GK+ + L + + + V LG ++ +
Sbjct: 62 NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFED 121
Query: 339 --ESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLF 396
E N V S ++ Y + G V +F + R++V +N++I+G +G + A F
Sbjct: 122 IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAF 181
Query: 397 EEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGM 456
M +G +PD T+S +L AC +G + G+E+ +++ I ++ +
Sbjct: 182 FNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV-HSLINHRGIELNQFVSNALIDMYAK 240
Query: 457 AGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
G+LE A + V + +++SC +HG + A
Sbjct: 241 CGDLENATS-VFESISVRSVACCNSMISCLAIHGKGKEA 278
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
D+ A +F + R + +WN++I +A+ D+A+ + M +PD T + ++
Sbjct: 142 DVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS 201
Query: 113 GCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVL 172
C ++ LD R +H Y+K + A+ VF I R +
Sbjct: 202 ACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVAC 261
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISG 215
CN+MIS + G + L++F+ M + +PD T + +++
Sbjct: 262 CNSMISCLAIHGKGKEALEMFSTMESL-DLKPDEITFIAVLTA 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
+V SS+L +S + +++H+LI + F + ++ YA DL +A ++F
Sbjct: 193 AVTVSSILSACAQSGRL-DVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVF 251
Query: 62 DKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGC-HENFDL 120
+ RS+ NSMI A K EAL ++ M + KPD T+ ++ C H F +
Sbjct: 252 ESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLM 311
Query: 121 DGLRIL 126
+GL+I
Sbjct: 312 EGLKIF 317
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 204/402 (50%), Gaps = 32/402 (7%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFT 208
Y K ++ A VF + +++V N+++SG SY L M + G +PD T
Sbjct: 2 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEG-IKPDAIT 60
Query: 209 LVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLY 268
L SG ++ LG + +++ + K A
Sbjct: 61 WNSLASG---YATLGKPE-------------------KALDVIGKMKEKGVA-------- 90
Query: 269 QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTE 328
P++V+W+A+ +G + +++ AL + + G + +++LL L+ + G E
Sbjct: 91 -PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 149
Query: 329 IHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGL 388
+HG+ LR L + V++AL+DMY K G + I +F ++N+++ S+N ++ G + G
Sbjct: 150 VHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR 209
Query: 389 AAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI 448
+ F MLE G++PD T + +L C ++GLV++G + F M + I P EH
Sbjct: 210 GEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCS 269
Query: 449 HIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPR 508
+V LLG +G L+EA++F+ ++ D+ IWGA LS C +H + ELAEI ++L EP
Sbjct: 270 CMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPH 329
Query: 509 KGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
A +M+ N+Y++ RW+DV+R R+ + N R SWI
Sbjct: 330 NSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWI 371
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K++H LR +L +++ AT ++ Y + DL SA +F +S+ WN M+ +A
Sbjct: 148 KEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMF 207
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGC 114
+ +E ++ ++ ML +PD T+ ++ C
Sbjct: 208 GRGEEGIAAFSVMLEAGMEPDAITFTSVLSVC 239
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 351 MYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDEST 410
MY+K G++ +VF+ M +NIV++NS++SGL L A L M ++G+KPD T
Sbjct: 1 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 60
Query: 411 LSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
+ L G + ++ +M ++ P
Sbjct: 61 WNSLASGYATLGKPEKALDVIGKMKEKGVAP 91
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 185/346 (53%), Gaps = 17/346 (4%)
Query: 222 LGIGQGIHGLCLKSGFDCNA-YVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALIT 280
L +G+ +HG+ K GF + +G+ L++ Y++ + A VF + + V W+A+I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 281 GFLQCEDY-----KKALFFYRNLSVAGKKADPI--LIASLLVASAQLTDVRLGTEIHGYV 333
G+ +D +KA+ +R S G P + +L A +Q + +G+ +HGY+
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 334 LRHGL--ESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQ 391
+ G E ++ + +AL+DMY KCG + VFE M+ +N+ ++ S+ +GL L+G +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 392 AFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIV 451
L M E G+KP+E T + LL A H GLV++G E+F+ M F + P EHY IV
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 452 KLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGA 511
LLG AG ++EAY F+L++ D+ + +L + C ++G T + E + + L + E
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 512 YK-------VMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
V LSN+ A G+W +V++ R + + PG S++
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 147/335 (43%), Gaps = 60/335 (17%)
Query: 149 YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKG-------LQLFNGMREIGK 201
Y+K + A KVF + ER V NAMI GY C KG + LF G
Sbjct: 157 YAKNGDLRYARKVFDEMPERTSVTWNAMIGGY--CSHKDKGNHNARKAMVLFRRFSCCGS 214
Query: 202 Q-QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGF--DCNAYVGSALVNMYSRFKCMN 258
+P T+V ++S + LL IG +HG K GF + + ++G+ALV+MYS+ C+N
Sbjct: 215 GVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLN 274
Query: 259 SAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
+A+ VF + ++ W+++ TG L++ G+ + + + + S
Sbjct: 275 NAFSVFELMKVKNVFTWTSMATG----------------LALNGRGNETPNLLNRMAES- 317
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS--- 375
G++ N I ++L+ Y G V GI +F++M+ R V+
Sbjct: 318 ------------------GIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVI 359
Query: 376 --YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRR 433
Y ++ LG G +A++ +L +KPD L L AC G G+EI +
Sbjct: 360 EHYGCIVDLLGKAGRIQEAYQF---ILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKA 416
Query: 434 MM-----DEFCIPPRTEHYIHIVKLLGMAGELEEA 463
++ DE E Y+ + +L G+ E
Sbjct: 417 LLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEV 451
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 121/315 (38%), Gaps = 44/315 (13%)
Query: 25 LHALILRSHLSHES-FYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK-- 81
+H ++ + +ES T +L FYA N DL A +FD+ P+R+ WN+MI +
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK 192
Query: 82 ---AHKFDEALSFYAKM--LRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXX--X 134
H +A+ + + + +P + T C++ + L+ ++H
Sbjct: 193 DKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFT 252
Query: 135 XXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFN 194
YSK ++ A VF + +++ +M +G + G + L N
Sbjct: 253 PEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLN 312
Query: 195 GMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF 254
M E G +P+ T L+S L + +GI F
Sbjct: 313 RMAESG-IKPNEITFTSLLSAYRHIGL--VEEGIE-----------------------LF 346
Query: 255 KCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLL 314
K M + +GV P + + ++ + ++A F + + K D IL+ SL
Sbjct: 347 KSMKTRFGV-----TPVIEHYGCIVDLLGKAGRIQEAYQFILAMPI---KPDAILLRSLC 398
Query: 315 VASAQLTDVRLGTEI 329
A + + +G EI
Sbjct: 399 NACSIYGETVMGEEI 413
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 189/339 (55%), Gaps = 14/339 (4%)
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP-DLVAWSALITGFL 283
G+ IH L K GF+ + ++LV YS ++ A VF + ++V W+A+I+ +
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG--LESN 341
+ E+ +A+ ++ + + D +++ L A A L V++G EI+ ++ L +
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEM-- 399
+ + ++L++MY+K G +F+ +++ +Y S+I G L+G A ++ +LF++M
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 400 ----LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLG 455
+ + P++ T G+L AC H+GLV++G+ F+ M+ ++ + PR H+ +V L
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 456 MAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFD-NEPRKGAYKV 514
+G L++A+ F+ + ++ IW LL C +HGN EL E V +++F+ + G Y V
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDY-V 382
Query: 515 MLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWIGGG 553
LSNIYAS G WD+ + RD V R+MPG SWI G
Sbjct: 383 ALSNIYASKGMWDEKSKMRD---RVRKRRMPGKSWIELG 418
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 312 SLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF-ENMRN 370
++ V+SAQ G +IH V + G + I + ++L+ Y G V VF E
Sbjct: 70 AIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK 129
Query: 371 RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+NIV + ++IS + + +A +LF+ M + ++ D ++ L AC G V+ G+EI
Sbjct: 130 QNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEI 189
Query: 431 FRR 433
+ R
Sbjct: 190 YSR 192
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 186/378 (49%), Gaps = 36/378 (9%)
Query: 204 PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGV 263
PD +T V LIS + + G+ HG +K G D V ++L++MY+ ++ A +
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 264 FIGLYQPDLVAWSALITGFLQCEDYKKA-------------------------------L 292
F+ + + D+V+W+++I G ++ D A +
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 293 FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMY 352
+R + AG + + + LL A + ++ G +H ++R L S++++ +ALIDMY
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 353 LKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
KC VGL +F+++ RN V++N +I LHG +LFE M+ L+PDE T
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL-- 470
G+LC C AGLV GQ + M+DEF I P H + L AG EEA + +L
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 471 --MQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDD 528
+ P +S W LLS GN L E +++ L + +P Y +L NIY+ GRW+D
Sbjct: 416 EDVTP-ESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWED 474
Query: 529 VKRTRDNIVNVGARKMPG 546
V R R+ + ++PG
Sbjct: 475 VNRVREMVKERKIGRIPG 492
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
Query: 51 NDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACL 110
N D+++A+ LFD+ P ++I WN MI A+ A+ ++S + +M+R + + T L
Sbjct: 197 NGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLL 256
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL 170
+ C + L R +H Y K V A ++F + R+
Sbjct: 257 LNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK 316
Query: 171 VLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHG 230
V N MI + G GL+LF M G +PD T VG++ G L+ GQ +
Sbjct: 317 VTWNVMILAHCLHGRPEGGLELFEAMIN-GMLRPDEVTFVGVLCGCARAGLVSQGQSYYS 375
Query: 231 L 231
L
Sbjct: 376 L 376
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 33/242 (13%)
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCED 287
+H + SG ++ L+ SRF +S+Y V I L + + +L
Sbjct: 41 VHARLITSGNFWDSSWAIRLLKSSSRFG--DSSYTVSIYRSIGKLYCANPVFKAYLVSSS 98
Query: 288 YKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSA 347
K+AL FY ++ G D SL+ + V G HG ++HG + + V ++
Sbjct: 99 PKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNS 158
Query: 348 LIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK----- 402
L+ MY CG + L +F + R+IVS+NS+I+G+ +G A KLF+EM +K
Sbjct: 159 LMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISW 218
Query: 403 --------------------------GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
G + +ESTL LL AC + +K+G+ + ++
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 437 EF 438
F
Sbjct: 279 TF 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 32/286 (11%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
Q+HA ++ S +S +A ++L+ + D S+Y + ++ N + +A+ +
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGD--SSYTVSIYRSIGKLYCANPVFKAYLVSS 97
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
+AL FY +LR PD++T+ LI + +D ++ H
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMRE----- 198
Y+ + A K+F I +RD+V N++I+G G +LF+ M +
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 199 --------IGKQQPD------------GF-----TLVGLISGLMDFSLLGIGQGIHGLCL 233
+G P GF TLV L++ + L G+ +H +
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 234 KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALI 279
++ + + + +AL++MY + K + A +F L + V W+ +I
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI 323
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 195/412 (47%), Gaps = 39/412 (9%)
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
N +I Y G + L LF M QP+ T LI + G +HG L
Sbjct: 55 NTLIRSYLTTGEYKTSLALFTHMLA-SHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 234 KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP----------------------- 270
K GF + +V ++ V Y + S+ +F + P
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 271 --------DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKA----DPILIASLLVASA 318
D+V+W+ +I GF + + KAL + + + ++A + S+L + A
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEM-IQNERAVITPNEATFVSVLSSCA 232
Query: 319 QLTD--VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
+RLG +IHGYV+ + + +AL+DMY K G + + + +F+ +R++ + ++
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
N++IS L +G QA ++FE M + P+ TL +L AC + LV G ++F +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 437 EFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
E+ I P +EHY +V L+G AG L +A NF+ SL D+ + GALL C +H NTEL
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 497 IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLS 548
V +QL +P+ V LS A D W + ++ R ++ G RK+P S
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 144/383 (37%), Gaps = 68/383 (17%)
Query: 71 LWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXX 130
++N++IR++ ++ +L+ + ML + +P+N T+ LI+ +F + LH
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 131 XXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAM-------------- 176
Y + + + K+F I +V CN++
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 177 -----------------ISGYSYCGFWGKGLQLFNGM--REIGKQQPDGFTLVGLISGLM 217
I+G+S G K L +F M E P+ T V ++S
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 218 DFSLLGI--GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAW 275
+F GI G+ IHG + +G+AL++MY + + A +F + + AW
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 276 SALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLR 335
+A+I+ K+AL + + + + I + ++L A A+ V LG ++ +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 336 HGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKL 395
E II +S Y V+ +G GL A
Sbjct: 353 ---EYKIIPTSE---------------------------HYGCVVDLIGRAGLLVDAANF 382
Query: 396 FEEMLEKGLKPDESTLSGLLCAC 418
+ + +PD S L LL AC
Sbjct: 383 IQSL---PFEPDASVLGALLGAC 402
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 38/257 (14%)
Query: 275 WSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVL 334
++ LI +L +YK +L + ++ + + + + SL+ A+ V G +HG L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 335 RHG--------------------LESN-----------IIVSSALIDMYLKCGFVGLGIL 363
+ G LES+ ++ ++L+D + G +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 364 VFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG---LKPDESTLSGLLCACCH 420
F+ M ++VS+ +VI+G GL A+A +F EM++ + P+E+T +L +C +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 421 --AGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGI 478
G ++ G++I +M + I T ++ + G AG+LE A + ++
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEII-LTTTLGTALLDMYGKAGDLEMALT-IFDQIRDKKVCA 291
Query: 479 WGALLSCCDVHGNTELA 495
W A++S +G + A
Sbjct: 292 WNAIISALASNGRPKQA 308
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 227/504 (45%), Gaps = 50/504 (9%)
Query: 22 TKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
+KQLH + L E ++ Y + A +F I WN++I A AK
Sbjct: 234 SKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAK 293
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
+ +AL + M P+ TY ++ L R +H
Sbjct: 294 SENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVL 353
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYS-----YCGFWGKGLQLFNGM 196
Y+K ++ ++ F I ++++V NA++SGY+ C L LF M
Sbjct: 354 GNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPIC------LSLFLQM 407
Query: 197 REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC 256
++G + P +T + L Q +H + ++ G++ N YV S+L+ Y++ +
Sbjct: 408 LQMGFR-PTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQL 462
Query: 257 MNSAY---------------GVFIGLY-----------------QPDLVAWSALITGFLQ 284
MN A + G+Y QPD V+W+ I +
Sbjct: 463 MNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR 522
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLE-SNII 343
+ +++ + ++++ + + D S+L ++L D+ LG+ IHG + + ++
Sbjct: 523 SDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTF 582
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
V + LIDMY KCG + + VFE R +N++++ ++IS LG+HG +A + F+E L G
Sbjct: 583 VCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLG 642
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEA 463
KPD + +L AC H G+VK+G +F++M D + + P +HY V LL G L+EA
Sbjct: 643 FKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEA 701
Query: 464 YNFVLSLMQPVDSGIWGALLSCCD 487
+ + + P D+ +W L C+
Sbjct: 702 EHLIREMPFPADAPVWRTFLDGCN 725
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/530 (24%), Positives = 239/530 (45%), Gaps = 37/530 (6%)
Query: 20 SRTKQLHAL--ILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIR 77
+RTK LHAL L S L + I+ Y ++ A +FD+ P+R+ +N++I+
Sbjct: 29 ARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIK 88
Query: 78 AFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXX 137
++K D+A +++M P+ T + L+ C + D+ LH
Sbjct: 89 GYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SC-ASLDVRAGTQLHGLSLKYGLFM 146
Query: 138 XXXXXXXXXTA-YSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGM 196
Y + + A +VF + + L N M+S + GF + + F +
Sbjct: 147 ADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFREL 206
Query: 197 REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC 256
+G + + +G++ G+ L I + +H K G DC V ++L++ Y +
Sbjct: 207 VRMGASLTES-SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGN 265
Query: 257 MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
+ A +F D+V+W+A+I + E+ KAL + ++ G + S+L
Sbjct: 266 THMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGV 325
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
S+ + + G +IHG ++++G E+ I++ +ALID Y KCG + L F+ +R++NIV +
Sbjct: 326 SSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCW 385
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC-------HAGLVKDGQE 429
N+++SG + LF +ML+ G +P E T S L +CC H+ +V+ G E
Sbjct: 386 NALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYE 444
Query: 430 ----IFRRMMDEFCIP---------------PRTEHYIHIVK-LLGMAGELEEAYNFVLS 469
+ +M + P + ++IV + G+ E+ + +
Sbjct: 445 DNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIST 504
Query: 470 LMQPVDSGIWG-ALLSCCDVHGNTELAEIVSQQLFDN-EPRKGAYKVMLS 517
L QP D+ W A+ +C + E+ E+ L N P K + +LS
Sbjct: 505 LEQP-DTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILS 553
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 202/500 (40%), Gaps = 40/500 (8%)
Query: 24 QLHALILRSHL-SHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
QLH L L+ L ++F T +L Y D L A +F+ P +S+ WN M+
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
E + F+ +++R ++ +++G DLD + LH
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
+AY K + A ++F D+V NA+I + K L+LF M E G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
P+ T V ++ LL G+ IHG+ +K+G + +G+AL++ Y++ + +
Sbjct: 314 -PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRL 372
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD 322
F + ++V W+AL++G+ +D L + + G + ++ L S +T+
Sbjct: 373 CFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMGFRPTEYTFSTAL-KSCCVTE 430
Query: 323 VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFE---------------- 366
++ ++H ++R G E N V S+L+ Y K + +L+ +
Sbjct: 431 LQ---QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 367 ----------------NMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDEST 410
+ + VS+N I+ + +LF+ ML+ ++PD+ T
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 411 LSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL 470
+L C + G I + T ++ + G G + V
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMK-VFEE 606
Query: 471 MQPVDSGIWGALLSCCDVHG 490
+ + W AL+SC +HG
Sbjct: 607 TREKNLITWTALISCLGIHG 626
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/515 (25%), Positives = 239/515 (46%), Gaps = 5/515 (0%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
Q+H ++ F + ++ YA + A LFD+ R++ + N ++R F +
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 84 KFDEALSFYAKMLRTETKPDNFTYACLIRGC-HENFDLDGLRILHXXXXXXXXXXXXXXX 142
+ Y +M + TY +IRGC H+ +G ++
Sbjct: 193 ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVA 252
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
YS +S + + F+ + E+D++ N+++S + G L LF+ M+ GK+
Sbjct: 253 NVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKR 312
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNA-YVGSALVNMYSRFKCMNSAY 261
P + ++ S + G+ IH LK GFD ++ +V SAL++MY + + ++
Sbjct: 313 -PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSA 371
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA-SAQL 320
++ L +L ++L+T + C K + + + G D + ++++L A S L
Sbjct: 372 LLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSL 431
Query: 321 TD-VRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSV 379
+ + T +H ++ G +++ VS +LID Y K G + VF+ + NI S+
Sbjct: 432 PESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSI 491
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
I+G +G+ K+ EM L PDE T+ +L C H+GLV++G+ IF + ++
Sbjct: 492 INGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYG 551
Query: 440 IPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVS 499
I P + Y +V LLG AG +E+A +L D W +LL C +H N + +
Sbjct: 552 ISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAA 611
Query: 500 QQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRD 534
+ L + EP A + +S Y G ++ ++ R+
Sbjct: 612 EVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIRE 646
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 181/369 (49%), Gaps = 11/369 (2%)
Query: 53 DLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
+L+SA+ FD+ R + +N +I ++ A+ YA+M+ + T+ ++
Sbjct: 61 NLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLS 120
Query: 113 GCH-ENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLV 171
C E F +G+++ H Y+ V A K+F + +R+L
Sbjct: 121 VCSDELFCREGIQV-HCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLA 179
Query: 172 LCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGL 231
+CN ++ + G + +++ M E+ +G T +I G L+ G+ +H L
Sbjct: 180 VCNLLLRCFCQTGESKRLFEVYLRM-ELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 232 CLKSGFD-CNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKK 290
+KSG++ N +V + LV+ YS ++ + F + + D+++W+++++ C DY
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVS---VCADYGS 295
Query: 291 ---ALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLE-SNIIVSS 346
+L + + GK+ S L ++ +D++ G +IH YVL+ G + S++ V S
Sbjct: 296 VLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQS 355
Query: 347 ALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKP 406
ALIDMY KC + L+++++ N+ NS+++ L G+ ++F M+++G
Sbjct: 356 ALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI 415
Query: 407 DESTLSGLL 415
DE TLS +L
Sbjct: 416 DEVTLSTVL 424
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 129/281 (45%), Gaps = 2/281 (0%)
Query: 151 KFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLV 210
K ++ A + F + RD+V N +ISG S G + ++L+ M G ++ T
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRES-ASTFP 116
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP 270
++S D G +H + GF CN +V SALV +Y+ + ++ A +F +
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
+L + L+ F Q + K+ Y + + G + + ++ + V G ++H
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 331 GYVLRHGLE-SNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLA 389
V++ G SNI V++ L+D Y CG + + F + ++++S+NS++S +G
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSV 296
Query: 390 AQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
+ LF +M G +P L C ++ G++I
Sbjct: 297 LDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQI 337
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/373 (19%), Positives = 158/373 (42%), Gaps = 13/373 (3%)
Query: 23 KQLHALILRSHLSHES-FYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
KQLH+L+++S + + F A ++ +Y+ DL + F+ P++ + WNS++ A
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXX-XXXXXXX 140
++L ++KM +P + + C N D+ + +H
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y K + + ++ ++ + +L CN++++ +CG +++F M + G
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEG 412
Query: 201 KQQPDGFTLVGLISGLMDFSL-----LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFK 255
G V L + L SL L +H +KSG+ + V +L++ Y++
Sbjct: 413 T----GIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSG 468
Query: 256 CMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLV 315
+ VF L P++ +++I G+ + + R + D + I S+L
Sbjct: 469 QNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLS 528
Query: 316 ASAQLTDVRLGTEIHGYV-LRHGLESNIIVSSALIDMYLKCGFVGLG-ILVFENMRNRNI 373
+ V G I + ++G+ + + ++D+ + G V L+ + + +
Sbjct: 529 GCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADC 588
Query: 374 VSYNSVISGLGLH 386
V+++S++ +H
Sbjct: 589 VAWSSLLQSCRIH 601
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 223/510 (43%), Gaps = 87/510 (17%)
Query: 39 FYATKILRFYALNDDLIS-AYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALS--FYAKM 95
F T I + + +++S A ++F S F +N++IR H+ S F+ +M
Sbjct: 48 FAITSISPSASASKEVVSYATSVFRFITNPSTFCFNTIIR-ICTLHEPSSLSSKRFFVEM 106
Query: 96 LRTETKPDNFTYACLIRGC--HENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFS 153
R PD T+ + + C +N DL ++ LH +F
Sbjct: 107 RRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQAL-------------------RFG 147
Query: 154 HVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLI 213
+S DL N +I YS LQLF+ Q D T LI
Sbjct: 148 LLS------------DLFTLNTLIRVYSLIAPIDSALQLFDE-----NPQRDVVTYNVLI 190
Query: 214 SGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLV 273
GL+ + + + A +F + DLV
Sbjct: 191 DGLV-----------------------------------KAREIVRARELFDSMPLRDLV 215
Query: 274 AWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYV 333
+W++LI+G+ Q ++A+ + + G K D + I S L A AQ D + G IH Y
Sbjct: 216 SWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYT 275
Query: 334 LRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAF 393
R L + +++ L+D Y KCGF+ + +FE ++ + ++N++I+GL +HG
Sbjct: 276 KRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTV 335
Query: 394 KLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKL 453
F +M+ G+KPD T +L C H+GLV + + +F +M + + +HY + L
Sbjct: 336 DYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADL 395
Query: 454 LGMAGELEEAYNFVLSLMQPVDSG------IWGALLSCCDVHGNTELAEIVSQQLFDNEP 507
LG AG +EEA + + P D G W LL C +HGN E+AE + ++ P
Sbjct: 396 LGRAGLIEEAAEMIEQM--PKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSP 453
Query: 508 RK-GAYKVMLSNIYASDGRWDDVKRTRDNI 536
G YKVM+ +YA+ RW++V + R+ I
Sbjct: 454 EDGGVYKVMV-EMYANAERWEEVVKVREII 482
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%)
Query: 21 RTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFA 80
+ K +H R L +SF AT ++ FYA + +A +F+ +++F WN+MI A
Sbjct: 267 KGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLA 326
Query: 81 KAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRIL 126
+ + ++ KM+ + KPD T+ ++ GC + +D R L
Sbjct: 327 MHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNL 372
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 159/284 (55%), Gaps = 5/284 (1%)
Query: 272 LVAWSALITGFLQCEDYKKA-LFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
+V+W+ +I G+ + + K+A L F R ++ K + I I ++L A L D+++ +H
Sbjct: 54 VVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVH 113
Query: 331 GYVLRHG-LESNIIVSSALIDMYLKCGFVGLGILVFENMRN--RNIVSYNSVISGLGLHG 387
YV + G + +I V+++LID Y KCG + F + N +N+VS+ ++IS +HG
Sbjct: 114 AYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHG 173
Query: 388 LAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDG-QEIFRRMMDEFCIPPRTEH 446
+ +A +F++M GLKP+ T+ +L AC H GL ++ E F M++E+ I P +H
Sbjct: 174 MGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKH 233
Query: 447 YIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNE 506
Y +V +L G LEEA L + + +W LL C V+ + ELAE V+++L + E
Sbjct: 234 YGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELE 293
Query: 507 PRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
G V++SNI+ GR+ D +R R + G K+PG S +
Sbjct: 294 RSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 12/277 (4%)
Query: 168 RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQG 227
R +V +I GY+ + + LF+ M +P+ T++ ++ + + L +
Sbjct: 52 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 111
Query: 228 IHGLCLKSGF-DCNAYVGSALVNMYSRFKCMNSAYGVFIGLY--QPDLVAWSALITGFLQ 284
+H K GF C+ V ++L++ Y++ C+ SA+ FI + + +LV+W+ +I+ F
Sbjct: 112 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 171
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ--LTDVRLGTEIHGYVLRHGLESNI 342
K+A+ ++++ G K + + + S+L A + L + + V + + ++
Sbjct: 172 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 231
Query: 343 IVSSALIDMYLKCGFVGLG-ILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEM-- 399
L+DM + G + + E V + ++ ++ A A ++ ++
Sbjct: 232 KHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 291
Query: 400 LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMD 436
LE+ D +S + C G D Q FR+ MD
Sbjct: 292 LERSHGGDYVLMSNIFCG---TGRFLDAQR-FRKQMD 324
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 1/377 (0%)
Query: 42 TKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETK 101
+ ++ FYA +L SA FD ++ + W ++I A ++ +A+ + ML
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281
Query: 102 PDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKV 161
P+ FT +++ C E L R +H Y+K +S+ KV
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 162 FSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSL 221
F G+ R+ V ++I+ ++ GF + + LF M+ + T+V ++
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKR-RHLIANNLTVVSILRACGSVGA 400
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITG 281
L +G+ +H +K+ + N Y+GS LV +Y + A+ V L D+V+W+A+I+G
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG 460
Query: 282 FLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN 341
+AL F + + G + +P +S L A A + +G IH ++ SN
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSN 520
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLE 401
+ V SALI MY KCGFV VF++M +N+VS+ ++I G +G +A KL M
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEA 580
Query: 402 KGLKPDESTLSGLLCAC 418
+G + D+ + +L C
Sbjct: 581 EGFEVDDYIFATILSTC 597
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 203/425 (47%), Gaps = 3/425 (0%)
Query: 7 SLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQ 66
+LL E +S K++HA+ L+ ++ ++ DL+ A +FD P+
Sbjct: 86 ALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPE 145
Query: 67 RSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDN-FTYACLIRGCHENFDLDGLRI 125
++ W +MI + K DEA + + ++ + N + CL+ C + + R
Sbjct: 146 KNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQ 205
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGF 185
+H Y++ ++ A + F + E+D++ A+IS S G
Sbjct: 206 VHGNMVKVGVGNLIVESSLVYF-YAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGH 264
Query: 186 WGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGS 245
K + +F GM P+ FT+ ++ + L G+ +H L +K + +VG+
Sbjct: 265 GIKAIGMFIGMLN-HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGT 323
Query: 246 ALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKA 305
+L++MY++ ++ VF G+ + V W+++I + ++A+ +R + A
Sbjct: 324 SLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIA 383
Query: 306 DPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF 365
+ + + S+L A + + LG E+H ++++ +E N+ + S L+ +Y KCG V
Sbjct: 384 NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 366 ENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVK 425
+ + +R++VS+ ++ISG G ++A +EM+++G++P+ T S L AC ++ +
Sbjct: 444 QQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLL 503
Query: 426 DGQEI 430
G+ I
Sbjct: 504 IGRSI 508
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 11/342 (3%)
Query: 158 ASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLM 217
A KVF + E++ V AMI GY G + LF + G + + V L++
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCS 195
Query: 218 DFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSA 277
+ +G+ +HG +K G N V S+LV Y++ + SA F + + D+++W+A
Sbjct: 196 RRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTA 254
Query: 278 LITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHG 337
+I+ + KA+ + + + + S+L A ++ +R G ++H V++
Sbjct: 255 VISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM 314
Query: 338 LESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFE 397
+++++ V ++L+DMY KCG + VF+ M NRN V++ S+I+ G +A LF
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 398 EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHI----VKL 453
M + L + T+ +L AC G + G+E+ ++ I E ++I V L
Sbjct: 375 IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQI-----IKNSIEKNVYIGSTLVWL 429
Query: 454 LGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
GE +A+N VL + D W A++S C G+ A
Sbjct: 430 YCKCGESRDAFN-VLQQLPSRDVVSWTAMISGCSSLGHESEA 470
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Query: 23 KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKA 82
K+LHA I+++ + + + ++ Y + A+N+ + P R + W +MI +
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSL 464
Query: 83 HKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXX 142
EAL F +M++ +P+ FTY+ ++ C + L R +H
Sbjct: 465 GHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG 524
Query: 143 XXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y+K VSEA +VF + E++LV AMI GY+ GF + L+L M G
Sbjct: 525 SALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEG-F 583
Query: 203 QPDGFTLVGLISGLMDFSL 221
+ D + ++S D L
Sbjct: 584 EVDDYIFATILSTCGDIEL 602
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 176/355 (49%), Gaps = 42/355 (11%)
Query: 236 GFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFY 295
G N +VGSA++N Y + + A F P++V+ + LI+G+L+ ++++AL +
Sbjct: 2 GLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLF 61
Query: 296 RNL---------------SVAGKKADPI-----------------LIASLLVASAQLTDV 323
R + S G+ + + + A + +
Sbjct: 62 RAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASH 121
Query: 324 RLGTEIHGYVLRH-GLESNIIVSSALIDMYLKCGFVGLGILVFENMR--NRNIVSYNSVI 380
G IH ++ G N+ V ++LI Y KCG + +L F + RNIVS+NS+I
Sbjct: 122 GAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMI 181
Query: 381 SGLGLHGLAAQAFKLFEEML-EKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
G +G +A +FE+M+ + L+P+ T+ G+L AC HAGL+++G F + ++++
Sbjct: 182 WGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD 241
Query: 440 IPP--RTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGI--WGALLSCCDVHGNTELA 495
P EHY +V +L +G +EA + S+ P+D GI W ALL C +H N LA
Sbjct: 242 DPNLLELEHYACMVDMLSRSGRFKEAEELIKSM--PLDPGIGFWKALLGGCQIHSNKRLA 299
Query: 496 EIVSQQLFDNEPRKGAYKVMLSNIYASDGRWDDVKRTRDNIVNVGARKMPGLSWI 550
++ + ++ + +PR + VMLSN Y++ W +V R + G ++ G SWI
Sbjct: 300 KLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWI 354
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 109/250 (43%), Gaps = 12/250 (4%)
Query: 42 TKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETK 101
T ++ Y + A +LF P+RS+ WN++I F++ + +EA++ + MLR
Sbjct: 42 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 101
Query: 102 -PDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTA-YSKFSHVSEAS 159
P+ T+ C I + +H + YSK ++ ++
Sbjct: 102 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 161
Query: 160 KVFSGIFE--RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLI---- 213
F+ + E R++V N+MI GY++ G + + +F M + +P+ T++G++
Sbjct: 162 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 221
Query: 214 -SGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL-YQPD 271
+GL+ + + ++ + + Y + +V+M SR A + + P
Sbjct: 222 HAGLIQEGYMYFNKAVNDYDDPNLLELEHY--ACMVDMLSRSGRFKEAEELIKSMPLDPG 279
Query: 272 LVAWSALITG 281
+ W AL+ G
Sbjct: 280 IGFWKALLGG 289
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 207/443 (46%), Gaps = 5/443 (1%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAH 83
+ HAL +++ L + F T ++ Y + A +FD+ +R I +W +MI A
Sbjct: 235 KTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNK 294
Query: 84 KFDEALSFYAKMLRTETKPDN---FTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXX 140
+ EAL + M+ E N T + G + L G +
Sbjct: 295 RQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKL-GKEVHAHVLKSKNYVEQPF 353
Query: 141 XXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
Y K ++ +VF G +R+ + A++SGY+ G + + L+ M++ G
Sbjct: 354 VHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG 413
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
+PD T+ ++ + + G+ IH LK+ F N + ++L+ MYS+
Sbjct: 414 -FRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYP 472
Query: 261 YGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
+F L Q ++ AW+A+I +++ D + + +R + ++ + D + + +L + L
Sbjct: 473 IRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDL 532
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVI 380
++LG E+HG++L+ ES VS+ +I MY KCG + F+ + + +++ ++I
Sbjct: 533 KALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAII 592
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCI 440
G + L A FE+M+ +G P+ T + +L C AG V + F M+ + +
Sbjct: 593 EAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNL 652
Query: 441 PPRTEHYIHIVKLLGMAGELEEA 463
P EHY +++LL G +EEA
Sbjct: 653 QPSEEHYSLVIELLNRCGRVEEA 675
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 228/498 (45%), Gaps = 13/498 (2%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
+ FS+LL+ + ++ KQ+H I + L F TK++ Y + A +F
Sbjct: 111 ATTFSALLEACVR-RKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 62 DKTPQRSIFLWNSMIR--AFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFD 119
D++ +++ WN+++R + ++ + LS + +M + ++ + + +
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229
Query: 120 L-DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMIS 178
L GL+ H Y K V A +VF I ERD+V+ AMI+
Sbjct: 230 LRQGLKT-HALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 179 GYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKS-GF 237
G ++ + L LF M K P+ L ++ L D L +G+ +H LKS +
Sbjct: 289 GLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNY 348
Query: 238 DCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRN 297
+V S L+++Y + M S VF G Q + ++W+AL++G+ + +AL
Sbjct: 349 VEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVW 408
Query: 298 LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGF 357
+ G + D + IA++L A+L ++ G EIH Y L++ N+ + ++L+ MY KCG
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 358 VGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCA 417
I +F+ + RN+ ++ ++I + ++F ML +PD T+ +L
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 418 CCHAGLVKDGQEIFRRMM-DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDS 476
C +K G+E+ ++ EF P I+K+ G G+L A NF + S
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSA-NFSFDAVAVKGS 585
Query: 477 GIWGALLSCCDVHGNTEL 494
W A++ + +G EL
Sbjct: 586 LTWTAII---EAYGCNEL 600
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 212/494 (42%), Gaps = 25/494 (5%)
Query: 14 KSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWN 73
+ H++ + I S S K + + D S+ L K P ++ +
Sbjct: 25 RPHRSDKDGAPAKSPIRPSRTRRPSTSPAKKPKPFRERDAFPSSLPLHSKNP----YIIH 80
Query: 74 SMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXX 133
I+ FA+ + + AL+ + + + T++ L+ C L + +H
Sbjct: 81 RDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRIN 140
Query: 134 XXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG--FWGKGLQ 191
Y+ V +A KVF ++ NA++ G G + L
Sbjct: 141 GLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLS 200
Query: 192 LFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMY 251
F MRE+G + ++L + S L G H L +K+G + ++ ++LV+MY
Sbjct: 201 TFTEMRELGVDL-NVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMY 259
Query: 252 SRFKC--MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADP-- 307
FKC + A VF + + D+V W A+I G + +AL +R + ++ +K P
Sbjct: 260 --FKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM-ISEEKIYPNS 316
Query: 308 ILIASLLVASAQLTDVRLGTEIHGYVLR-HGLESNIIVSSALIDMYLKCGFVGLGILVFE 366
+++ ++L + ++LG E+H +VL+ V S LID+Y KCG + G VF
Sbjct: 317 VILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFY 376
Query: 367 NMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKD 426
+ RN +S+ +++SG +G QA + M ++G +PD T++ +L C +K
Sbjct: 377 GSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQ 436
Query: 427 GQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGE--LEEAYNFVLSLMQPVDSGIWGALLS 484
G+EI + +P + + L+ M + + E + ++ + W A++
Sbjct: 437 GKEIHCYALKNLFLP----NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMID 492
Query: 485 C----CDVHGNTEL 494
C CD+ E+
Sbjct: 493 CYVENCDLRAGIEV 506
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 145/312 (46%), Gaps = 40/312 (12%)
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQ 284
G+ +H +G + N ++ + LV+MY+ + A VF ++ +W+AL+ G +
Sbjct: 130 GKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVI 189
Query: 285 C--EDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
+ Y+ L + + G + ++++ + A + +R G + H +++GL +++
Sbjct: 190 SGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSV 249
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML-E 401
+ ++L+DMY KCG VGL VF+ + R+IV + ++I+GL + +A LF M+ E
Sbjct: 250 FLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISE 309
Query: 402 KGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELE 461
+ + P+ L+ +L +K G+E+ + H++K
Sbjct: 310 EKIYPNSVILTTILPVLGDVKALKLGKEV----------------HAHVLK--------- 344
Query: 462 EAYNFVLSLMQP-VDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIY 520
+ N+V QP V SG+ C D+ + + ++ R L + Y
Sbjct: 345 -SKNYV---EQPFVHSGLIDLYCKCGDMASGRRV-------FYGSKQRNAISWTALMSGY 393
Query: 521 ASDGRWDDVKRT 532
A++GR+D R+
Sbjct: 394 AANGRFDQALRS 405
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 146/338 (43%), Gaps = 3/338 (0%)
Query: 23 KQLHALILRS-HLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAK 81
K++HA +L+S + + F + ++ Y D+ S +F + QR+ W +++ +A
Sbjct: 336 KEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAA 395
Query: 82 AHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXX 141
+FD+AL M + +PD T A ++ C E + + +H
Sbjct: 396 NGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSL 455
Query: 142 XXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
YSK ++F + +R++ AMI Y G+++F M + K
Sbjct: 456 VTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML-LSK 514
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
+PD T+ +++ D L +G+ +HG LK F+ +V + ++ MY + + SA
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSAN 574
Query: 262 GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLT 321
F + + W+A+I + E ++ A+ + + G + ++L +Q
Sbjct: 575 FSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAG 634
Query: 322 DVRLGTEIHGYVLR-HGLESNIIVSSALIDMYLKCGFV 358
V +LR + L+ + S +I++ +CG V
Sbjct: 635 FVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRV 672
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 176/355 (49%), Gaps = 36/355 (10%)
Query: 150 SKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTL 209
S F AS VF+ + N MI S + L LF M + Q D FT
Sbjct: 63 SSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTF 122
Query: 210 VGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC------------- 256
+I + S + +G +HGL +K+GF + + + L+++Y FKC
Sbjct: 123 PFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLY--FKCGKPDSGRKVFDKM 180
Query: 257 --------------------MNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYR 296
++SA VF + ++V+W+A+IT +++ +A +R
Sbjct: 181 PGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFR 240
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG 356
+ V K + I +LL AS QL + +G +H Y ++G + + +ALIDMY KCG
Sbjct: 241 RMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCG 300
Query: 357 FVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG-LKPDESTLSGLL 415
+ VF+ M+ +++ ++NS+I+ LG+HG +A LFEEM E+ ++PD T G+L
Sbjct: 301 SLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVL 360
Query: 416 CACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL 470
AC + G VKDG F RM+ + I P EH +++LL A E+E+A N V S+
Sbjct: 361 SACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 127/317 (40%), Gaps = 68/317 (21%)
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCED 287
IH +K + + L+++ S F A VF L P W+ +I
Sbjct: 39 IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHK 98
Query: 288 YKKALFFYRNLSVA-----GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
++AL + + ++ K P +I + L +S+ +RLGT++HG ++ G +++
Sbjct: 99 PREALLLFILMMISHQSQFDKFTFPFVIKACLASSS----IRLGTQVHGLAIKAGFFNDV 154
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL----------------GLH 386
+ L+D+Y KCG G VF+ M R+IVS+ +++ GL +
Sbjct: 155 FFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMR 214
Query: 387 GLAA---------------QAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIF 431
+ + +AF+LF M +KP+E T+ LL A G + G+ +
Sbjct: 215 NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWV- 273
Query: 432 RRMMDEFCIPPRTEHYIH-------------IVKLLGMAGELEEAYNFVLSLMQPVDSGI 478
Y H ++ + G L++A V +MQ
Sbjct: 274 -------------HDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARK-VFDVMQGKSLAT 319
Query: 479 WGALLSCCDVHGNTELA 495
W ++++ VHG E A
Sbjct: 320 WNSMITSLGVHGCGEEA 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%)
Query: 51 NDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACL 110
N L SA +F++ P R++ W +MI A+ K + DEA + +M + KP+ FT L
Sbjct: 198 NSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNL 257
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL 170
++ + L R +H YSK + +A KVF + + L
Sbjct: 258 LQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 171 VLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISG 215
N+MI+ G + L LF M E +PD T VG++S
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSA 362
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 198/456 (43%), Gaps = 78/456 (17%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
AL+ + + + I+ Y ++ + SA +FD+ QR WN MI + K
Sbjct: 123 FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGN 182
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
+EA + M P+N + +
Sbjct: 183 KEEACKLFDMM------PENDVVSWTV--------------------------------- 203
Query: 145 XXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
T ++K + A K F + E+ +V NAM+SGY+ GF L+LFN M +G +P
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG-VRP 262
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF 264
+ T V +IS + + + + L + N +V +AL++M+++ + + SA +F
Sbjct: 263 NETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIF 322
Query: 265 IGL-YQPDLVAWSALITGFLQCEDYKKAL------------------------------- 292
L Q +LV W+A+I+G+ + D A
Sbjct: 323 NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAI 382
Query: 293 -FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDM 351
FF + K D + + S+L A + D+ LG I Y+ ++ ++ N +LI M
Sbjct: 383 EFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFM 442
Query: 352 YLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTL 411
Y + G + VF+ M+ R++VSYN++ + +G + L +M ++G++PD T
Sbjct: 443 YARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTY 502
Query: 412 SGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHY 447
+ +L AC AGL+K+GQ IF+ + + P +HY
Sbjct: 503 TSVLTACNRAGLLKEGQRIFKSIRN-----PLADHY 533
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 187/460 (40%), Gaps = 90/460 (19%)
Query: 1 MSVKFSSLLQELTKSHQTRSRTKQLHA-LILRSHLSHESFYATKIL----RFYALNDDLI 55
MS + + L + T + Q+HA LI+ + L +S++A++I+ R A
Sbjct: 1 MSRELTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRA-----P 55
Query: 56 SAYN--LFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG 113
S Y +FD ++F+ NSM + F+K ++ L Y + R PD F++ +I+
Sbjct: 56 SYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS 115
Query: 114 CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLC 173
F + + Y K V A KVF I +R
Sbjct: 116 AGR-FGI----LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDW 170
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
N MISGY G + +LF+ M E D + +I+G
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPE-----NDVVSWTVMITG------------------ 207
Query: 234 KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALF 293
+++ K + +A F + + +V+W+A+++G+ Q + AL
Sbjct: 208 -----------------FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALR 250
Query: 294 FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYL 353
+ ++ G + + ++ A + D L + + + N V +AL+DM+
Sbjct: 251 LFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHA 310
Query: 354 KC---------------------------GFVGLGIL-----VFENMRNRNIVSYNSVIS 381
KC G+ +G + +F+ M RN+VS+NS+I+
Sbjct: 311 KCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIA 370
Query: 382 GLGLHGLAAQAFKLFEEMLEKG-LKPDESTLSGLLCACCH 420
G +G AA A + FE+M++ G KPDE T+ +L AC H
Sbjct: 371 GYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/351 (19%), Positives = 144/351 (41%), Gaps = 52/351 (14%)
Query: 161 VFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFS 220
+F + ++ + N+M +S L+L+ G PD F+ +I F
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIM-PDAFSFPVVIKSAGRFG 120
Query: 221 LLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALIT 280
+L L K GF + YV + +++MY + + + SA VF + Q W+ +I+
Sbjct: 121 IL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLES 340
G+ + + ++A + + E+
Sbjct: 176 GYWKWGNKEEACKLFDMMP---------------------------------------EN 196
Query: 341 NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEML 400
+++ + +I + K + F+ M +++VS+N+++SG +G A +LF +ML
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 401 EKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGEL 460
G++P+E+T ++ AC + + +++DE + ++ + ++
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLV-KLIDEKRVRLNCFVKTALLDMHAKCRDI 315
Query: 461 EEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVS-QQLFDNEPRKG 510
+ A L + W A++S G T + ++ S +QLFD P++
Sbjct: 316 QSARRIFNELGTQRNLVTWNAMIS-----GYTRIGDMSSARQLFDTMPKRN 361
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 171/388 (44%), Gaps = 13/388 (3%)
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI 125
Q + +N++I +K EA++ +M+ +PD FTY ++ G + D+D
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYS 181
L A + +V++A +F+ + + ++V N++I
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 182 YCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNA 241
G W +L + M E K P+ T LI + L + ++ +K D +
Sbjct: 302 NYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 242 YVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRN 297
+ S+L+N + ++ A +F + P++V ++ LI GF + + ++ + +R
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 298 LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGF 357
+S G + + +L+ Q D + +I ++ G+ +II S L+D K G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 358 VGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSG 413
+ ++VFE ++ +I +YN +I G+ G + LF + KG+KP+ +
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 414 LLCACCHAGLVKDGQEIFRRMMDEFCIP 441
++ C GL ++ +FR M ++ +P
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLP 568
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 206/513 (40%), Gaps = 63/513 (12%)
Query: 40 YATKILRFYALNDDLISAYNLF----DKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKM 95
Y K+ R L+ L A +LF P SI +N ++ A AK +KFD +S +M
Sbjct: 47 YREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM 106
Query: 96 LRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHV 155
D ++Y LI L + Y +
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166
Query: 156 SEA----SKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVG 211
SEA ++F ++ + V N +I G + + L + M G QPD FT
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGT 225
Query: 212 LISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL---- 267
+++GL + + + K + + + + +++ +K +N A +F +
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGT 327
+P++V +++LI R L G+ +D AS L+D
Sbjct: 286 IRPNVVTYNSLI----------------RCLCNYGRWSD---------ASRLLSD----- 315
Query: 328 EIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGL 383
++ + N++ SALID ++K G + +++ M R +I +Y+S+I+G
Sbjct: 316 -----MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
+H +A +FE M+ K P+ T + L+ C A V++G E+FR M +
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV-GN 429
Query: 444 TEHYIHIVKLLGMAGELEEAYNFVLSLMQ---PVDSGIWGALLSCCDVHGNTELAEIVSQ 500
T Y +++ L AG+ + A ++ P D + LL +G E A +V +
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 501 QLFDN--EPRKGAYKVMLSNI----YASDGRWD 527
L + EP Y +M+ + DG WD
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDG-WD 521
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 146/364 (40%), Gaps = 79/364 (21%)
Query: 59 NLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG--CHE 116
++ ++ ++ ++++I AF K K EA Y +M++ PD FTY+ LI G H+
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 117 NFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERD----LVL 172
D EA +F + +D +V
Sbjct: 375 RLD-------------------------------------EAKHMFELMISKDCFPNVVT 397
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLC 232
N +I G+ +G++LF RE+ ++ GL+ + ++ L I GL
Sbjct: 398 YNTLIKGFCKAKRVEEGMELF---REMSQR--------GLVGNTVTYNTL-----IQGL- 440
Query: 233 LKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKAL 292
++G DC+ FK M S GV PD++ +S L+ G + +KAL
Sbjct: 441 FQAG-DCDM--------AQKIFKKMVSD-GV-----PPDIITYSILLDGLCKYGKLEKAL 485
Query: 293 FFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMY 352
+ L + + D ++ + V G ++ + G++ N+I+ + +I +
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 353 LKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
+ G +F M+ N +YN++I G A + +L +EM G D
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605
Query: 409 STLS 412
ST+S
Sbjct: 606 STIS 609
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 180/412 (43%), Gaps = 19/412 (4%)
Query: 69 IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLRILH 127
++ N ++ F ++ + A SF KM++ +PD T+ LI G C N + + +++
Sbjct: 107 LYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN 166
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI----FERDLVLCNAMISGYSYC 183
+ K HV+ A +F + D+V+ ++++G
Sbjct: 167 QMVEMGIKPDVVMYTTII-DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 184 GFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYV 243
G W L GM + K +PD T LI + + ++ ++ N +
Sbjct: 226 GRWRDADSLLRGMTK-RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLS 299
++L+N + C++ A +F + PD+VA+++LI GF +C+ A+ + +S
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
G + I +L+ Q+ + E+ +++ G+ NI + L+ G V
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 360 LGILVFENMRNR-------NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
+++FE+M+ R NI +YN ++ GL +G +A +FE+M ++ + T +
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAY 464
++ C AG VK+ +F + + + P Y ++ L G EA+
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSK-GVKPNVVTYTTMISGLFREGLKHEAH 515
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 165/388 (42%), Gaps = 13/388 (3%)
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI 125
Q + +N++I +K EA++ +M+ +PD TY ++ G + D D
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYS 181
L K+ H+ +A +F + + ++V +++IS
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 182 YCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNA 241
G W +L + M E K PD FT LI + L + ++ +K D +
Sbjct: 303 NYGRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 242 YVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRN 297
S+L+N + ++ A +F + PD+V ++ LI GF + + ++ + +R
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 298 LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGF 357
+S G + + L+ Q D + EI ++ G+ NI+ + L+D K G
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 358 VGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSG 413
+ ++VFE ++ I +YN +I G+ G + LF + KG+KPD +
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 414 LLCACCHAGLVKDGQEIFRRMMDEFCIP 441
++ C G ++ +F+ M ++ +P
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 205/498 (41%), Gaps = 60/498 (12%)
Query: 52 DDLISAYNLFDKT-PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACL 110
DD ++ + K+ P SI ++ ++ A AK +KFD +S +M +++TY+ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI----F 166
I + + S + A V + +
Sbjct: 123 I-----------------------------------NCFCRRSQLPLALAVLGKMMKLGY 147
Query: 167 ERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQ 226
E ++V +++++GY + + + L + M G QP+ T LI GL +
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 227 GIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF----IGLYQPDLVAWSALITGF 282
+ + G + +VN + + A+ + G +P ++ ++ +I G
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 283 LQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
+ + AL ++ + G + + + +SL+ + + ++ + ++
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEE 398
SALID ++K G + +++ M R +IV+Y+S+I+G +H +A ++FE
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 399 MLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAG 458
M+ K PD T + L+ C V++G E+FR M + T Y +++ L AG
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV-GNTVTYNILIQGLFQAG 445
Query: 459 E---LEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQ--QLFDNEPRKGAYK 513
+ +E + ++S P + + LL +G E A +V + Q EP Y
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 514 VMLSNI----YASDGRWD 527
+M+ + DG WD
Sbjct: 506 IMIEGMCKAGKVEDG-WD 522
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 9/252 (3%)
Query: 59 NLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENF 118
++ ++ +F ++++I AF K K EA Y +M++ P TY+ LI G +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 119 DLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL----VLCN 174
LD + + + K+ V E +VF + +R L V N
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 175 AMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLK 234
+I G G ++F M G P+ T L+ GL L + +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 235 SGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGFLQCEDYKK 290
S + Y + ++ + + + +F L +PD+VA++ +I+GF + ++
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 291 ALFFYRNLSVAG 302
A ++ + G
Sbjct: 555 ADALFKEMKEDG 566
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 162/376 (43%), Gaps = 43/376 (11%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CH-ENFDLDGLRILHXX 129
+ +I +A K +A+ + M+R+ PDN A L+ G CH DL
Sbjct: 152 YTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL--------- 202
Query: 130 XXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKG 189
AY + ++++V + V+ NA+ISG+ G K
Sbjct: 203 ------------------AYEMVAEEIKSARV-----KLSTVVYNALISGFCKAGRIEKA 239
Query: 190 LQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVN 249
L + M +IG +PD T L++ D ++L +G+ ++SG +AY + L+
Sbjct: 240 EALKSYMSKIG-CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLK 298
Query: 250 MYSRFKCMNSAYGVFIGLYQP----DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKA 305
+ R + Y + +P D+V++S LI F + + +KA + + G
Sbjct: 299 RHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVM 358
Query: 306 DPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF 365
+ + SL+ A + + + ++ + GL + I + ++D K G V VF
Sbjct: 359 NVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVF 418
Query: 366 ENMRNRNI----VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHA 421
+M I +SYNS+ISGL G +A KLFE+M K PDE T ++
Sbjct: 419 NDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRG 478
Query: 422 GLVKDGQEIFRRMMDE 437
+ +++ +MMD+
Sbjct: 479 KKLSAAYKVWDQMMDK 494
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 133/311 (42%), Gaps = 21/311 (6%)
Query: 167 ERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQ 226
E D+V +I+G G ++++N M G PD L+ GL + +
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG-VSPDNKACAALVVGLCHARKVDLAY 204
Query: 227 GIHGLCLKSG-FDCNAYVGSALVNMYSRFKCMNSA-----YGVFIGLYQPDLVAWSALIT 280
+ +KS + V +AL++ + + + A Y IG +PDLV ++ L+
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC-EPDLVTYNVLLN 263
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLES 340
+ K+A + +G + D LL +++ + + ++++ +E
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH---PDKCYNFMVKE-MEP 319
Query: 341 ----NIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQA 392
+++ S LI+ + + +FE MR + N+V+Y S+I G ++ A
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379
Query: 393 FKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVK 452
KL ++M E GL PD + +L C +G V +F M+ E I P Y ++
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI-EHEITPDAISYNSLIS 438
Query: 453 LLGMAGELEEA 463
L +G + EA
Sbjct: 439 GLCRSGRVTEA 449
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 190/459 (41%), Gaps = 25/459 (5%)
Query: 3 VKFSSLLQELTKSHQ---TRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYN 59
V+FS LL + K ++ S +Q+ L +SH + + + ++ L A
Sbjct: 76 VEFSKLLSAIAKMNKFDLVISLGEQMQNL----GISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 60 LFDKTPQ----RSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCH 115
+ K + SI NS++ F ++ EA++ +M+ +PD T+ L+ G
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 116 ENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA----SKVFSGIFERDLV 171
++ L K A +K+ G E D+V
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 172 LCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGL 231
+ N +I G LFN M G +PD FT LIS L ++ +
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKG-IKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 232 CLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ-----PDLVAWSALITGFLQCE 286
L+ + + +AL++ + + + A ++ + + PD+VA++ LI GF + +
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 287 DYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSS 346
++ + +R +S G + + +L+ Q D + ++ G+ +I+ +
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 347 ALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
L+D G V ++VFE M+ R +IV+Y ++I L G + LF + K
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
G+KP+ T + ++ C GL ++ +F M ++ +P
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 145/394 (36%), Gaps = 86/394 (21%)
Query: 57 AYNLFDKTP----QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
A NL +K + + ++N++I K D+A + KM KPD FTY LI
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI- 292
Query: 113 GCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER---- 168
+ + S+AS++ S + E+
Sbjct: 293 ----------------------------------SCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 169 DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
DLV NA+I + G + +L++ M + PD LI G
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG------------- 365
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL----VAWSALITGFLQ 284
+ ++K + VF + Q L V ++ LI GF Q
Sbjct: 366 ----------------------FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIV 344
D A ++ + G D + LL +V + Y+ + ++ +I+
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEML 400
+ +I+ K G V G +F ++ + N+V+Y +++SG GL +A LF EM
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 401 EKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
E G P+ T + L+ A G E+ + M
Sbjct: 524 EDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 175/443 (39%), Gaps = 57/443 (12%)
Query: 41 ATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHKFD-------------- 86
+ K+L+ L+D + ++ P SI ++ ++ A AK +KFD
Sbjct: 47 SRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 106
Query: 87 ---------------------EALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLR 124
AL+ KM++ P T L+ G CH N + +
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSH--VSEASKVFSGIF----ERDLVLCNAMIS 178
++ + F H SEA + + + DLV A+I+
Sbjct: 167 LVDQMVEMGYQPDTVTFTTL---VHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 179 GYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFD 238
G G L L N M E GK + D +I GL + + + G
Sbjct: 224 GLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 239 CNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFF 294
+ + + L++ + + A + + + PDLV ++ALI F++ +A
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 295 YRNLSVAGKKADPILIA--SLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMY 352
Y + V K P ++A +L+ + V G E+ + + GL N + + LI +
Sbjct: 343 YDEM-VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 353 LKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
+ +VF+ M + +I++YN ++ GL +G A +FE M ++ +K D
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 409 STLSGLLCACCHAGLVKDGQEIF 431
T + ++ A C AG V+DG ++F
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLF 484
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 14/264 (5%)
Query: 209 LVGLISGLMDFSL-LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL 267
L+ I+ + F L + +G+ + L G N Y S +N + R ++ A + +
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNL----GISHNLYTYSIFINYFCRRSQLSLALAILGKM 136
Query: 268 ----YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
Y P +V ++L+ GF +A+ + G + D + +L+ Q
Sbjct: 137 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN----RNIVSYNSV 379
+ ++ G + +++ A+I+ K G L + + M ++V YN++
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFC 439
I GL + AF LF +M KG+KPD T + L+ C+ G D + M+ E
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML-EKN 315
Query: 440 IPPRTEHYIHIVKLLGMAGELEEA 463
I P + ++ G+L EA
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEA 339
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 168/388 (43%), Gaps = 13/388 (3%)
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI 125
Q F +N++I + ++ EA++ +M+ +PD TY ++ G + D+D
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYS 181
L A + +V++A +F+ + + ++V N++I
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 182 YCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNA 241
G W +L + M E K P+ T LI + L + ++ +K D +
Sbjct: 303 NYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 242 YVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRN 297
+ S+L+N + ++ A +F + P++V ++ LI GF + + + + +R
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 298 LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGF 357
+S G + + +L+ Q + + ++ G+ +I+ S L+D G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 358 VGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSG 413
V ++VFE ++ +I +YN +I G+ G + LF + KG+KP+ T +
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 414 LLCACCHAGLVKDGQEIFRRMMDEFCIP 441
++ C GL ++ +FR M +E +P
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLP 569
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 114/517 (22%), Positives = 203/517 (39%), Gaps = 70/517 (13%)
Query: 40 YATKILRFYALND-DLISAYNLF----DKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAK 94
Y + + LND L A NLF P SI ++ ++ A AK +KFD +S +
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 95 MLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSH 154
M + +TY+ LI + + S
Sbjct: 107 MQNLGISHNLYTYSILI-----------------------------------NCFCRRSQ 131
Query: 155 VSEASKVFSGI----FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLV 210
+S A V + + +E D+V N++++G+ + + L M E+G QPD FT
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG-YQPDSFTFN 190
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ- 269
LI GL + + + G + +VN + ++ A + + Q
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 270 ---PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
P +V ++ +I ++ AL + + G + + + SL+
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 310
Query: 327 TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISG 382
+ + ++ + N++ SALID ++K G + +++ M R +I +Y+S+I+G
Sbjct: 311 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 370
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
+H +A +FE M+ K P+ T + L+ C A V +G E+FR M +
Sbjct: 371 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV-G 429
Query: 443 RTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGI------WGALLSCCDVHGNTELAE 496
T Y ++ A E + A + Q V G+ + LL +G E A
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQ---IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 497 IVSQ--QLFDNEPRKGAYKVMLSNI----YASDGRWD 527
+V + Q EP Y +M+ + DG WD
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG-WD 522
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 103/198 (52%)
Query: 313 LLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRN 372
L + A L + ++H + L+ + +++ +I M+ +C + VF++M +++
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 373 IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFR 432
+ S++ ++ +G+ A LFEEM + GLKP+E T + AC G +++ F
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFD 361
Query: 433 RMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNT 492
M +E I P+TEHY+ ++ +LG G L EA ++ L + W A+ + +HG+
Sbjct: 362 SMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDI 421
Query: 493 ELAEIVSQQLFDNEPRKG 510
+L + + + + D +P K
Sbjct: 422 DLEDYMEELMVDVDPSKA 439
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/508 (22%), Positives = 207/508 (40%), Gaps = 49/508 (9%)
Query: 56 SAYNLFDKTPQRSIFL----WNSMIRAFAKAHKFDEALSFYAKMLRT-ETKPDNFTYACL 110
SA +FD + + L +N ++ + K ++AL +M+ + PDN TY +
Sbjct: 187 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER-- 168
++ + L L+ L Y K + EA ++ + +
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 169 --DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSL----- 221
DL N +I+G G +GL+L + M+ + K QPD T LI G + L
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSL-KLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 222 ----------LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPD 271
+ Q H + LK + C A+ + K + +G + PD
Sbjct: 366 KLMEQMENDGVKANQVTHNISLK--WLCKEEKREAVTR---KVKELVDMHG-----FSPD 415
Query: 272 LVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHG 331
+V + LI +L+ D AL R + G K + I + ++L A + + +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 332 YVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIV----SYNSVISGLGLHG 387
+ G + + LI + + V + +++ M+ I ++NS+I GL HG
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 388 LAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHY 447
A + F+E+ E GL PD+ST + ++ C G V+ E + + P ++Y
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP---DNY 592
Query: 448 IHIVKLLGMAGE--LEEAYNFVLSLMQ--PVDSGIWGALLSC-CDVHGNTELAEIVSQQL 502
+ L G+ E E+A NF +L++ VD+ + ++S C E +++S+
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 503 FDN-EPRKGAYKVMLSNIYASDGRWDDV 529
EP + Y +S + DG+ +
Sbjct: 653 EKGLEPDRFTYNSFIS-LLMEDGKLSET 679
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 146/381 (38%), Gaps = 17/381 (4%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHE-NFDLDGLRILHXXX 130
+N +I A E L M + +PD TY LI GC E L+ +++
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 131 XXXXXXXXXXXXXXXX--TAYSKFSHVSEASKVFSGI--FERDLVLCNAMISGYSYCGFW 186
K V+ K + F D+V + +I Y G
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 187 GKGLQLFNGMREIGKQ--QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
L++ MRE+G++ + + TL ++ L L + K GF +
Sbjct: 433 SGALEM---MREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSV 300
L+ + R + + A ++ + + P + +++LI G + A+ + L+
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 301 AGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGL 360
+G D S+++ + V E + ++H + + + L++ K G
Sbjct: 550 SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609
Query: 361 GILVFENM---RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCA 417
+ F + R + V+YN++IS +A+ L EM EKGL+PD T + +
Sbjct: 610 ALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 418 CCHAGLVKDGQEIFRRMMDEF 438
G + + E+ ++ +F
Sbjct: 670 LMEDGKLSETDELLKKFSGKF 690
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 156/369 (42%), Gaps = 17/369 (4%)
Query: 87 EALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLRILHXXXXXXXXXXXXXXXXXX 145
A F KM++ +PD T+ L+ G CH N D + L
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI-ALFDQILGMGFKPNVVTYTTL 194
Query: 146 XTAYSKFSHVSEASKVFSGI----FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGK 201
K H++ A ++F+ + ++V NA+++G G WG L M + +
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK-RR 253
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
+P+ T LI + L + ++ + ++ + + +L+N + ++ A
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 262 GVFI-----GLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
+F G Y P+ V ++ LI GF + + + + + +S G A+ I L+
Sbjct: 314 QMFYLMERNGCY-PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----N 372
+ + E+ + +I + L+D G V +++FE MR R N
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 373 IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFR 432
IV+Y +I G+ G AF LF + KG+KP+ T + ++ C GL+ + +F+
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 433 RMMDEFCIP 441
+M ++ +P
Sbjct: 493 KMKEDGFLP 501
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 136/290 (46%), Gaps = 16/290 (5%)
Query: 230 GLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF---IGL-YQPDLVAWSALITGFLQC 285
G +K GF+ + ++L+N Y + + A +F +G+ ++P++V ++ LI +
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 286 EDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVS 345
A+ + + G + + + +L+ ++ + +++ +E N+I
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 346 SALIDMYLKCGFVGLGILVFENMRN----RNIVSYNSVISGLGLHGLAAQAFKLFEEMLE 401
+ALID ++K G + ++ M ++ +Y S+I+GL ++GL +A ++F M
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 402 KGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVK---LLGMAG 458
G P+E + L+ C + V+DG +IF M + + T Y +++ L+G
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA-NTITYTVLIQGYCLVGRPD 380
Query: 459 ELEEAYNFVLSLMQPVDSGIWGALLS--CCDVHGNTELAEIVSQQLFDNE 506
+E +N + S P D + LL CC+ G E A ++ + + E
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN--GKVEKALMIFEYMRKRE 428
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 164/398 (41%), Gaps = 29/398 (7%)
Query: 25 LHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQRSIFLWNSMIRAFAKAHK 84
+H + L S S + K+++ DL++ + S++ + ++
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKL-GFEPDLVT---------------FTSLLNGYCHWNR 168
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
++A++ + ++L KP+ TY LIR +N L+ L
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 145 XXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
T + +A+ + + +R +++ A+I + G + +L+N M ++
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 201 KQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSA 260
PD FT LI+GL + LL + + L ++G N + + L++ + + K +
Sbjct: 289 -VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 261 YGVFIGLYQPDLVA----WSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA 316
+F + Q +VA ++ LI G+ A + +S D LL
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 317 SAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----N 372
V I Y+ + ++ NI+ + +I K G V +F ++ ++ N
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 373 IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDEST 410
+++Y ++ISG GL +A LF++M E G P+ES
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 205/513 (39%), Gaps = 55/513 (10%)
Query: 31 RSHLSHESFYATKILRFYALNDDLISAYNLFDKTPQR----SIFLWNSMIRAFAKAHKFD 86
R+ L + F ++R + +L A L ++ S+ W +I AF KA K D
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 87 EALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXX 146
EA+ F +M + D Y LIRG + +LD + L
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 147 TAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
+ K + EAS++F + ER ++ +I G G + LQL N M E +
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE-KDE 348
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGI--------------------HGLCLKSGFDCNAY 242
+P+ T +I+ L L+ I GLC K D
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD---- 404
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAG 302
A +Y K +S+Y PD+++++ALI G + +AL Y L
Sbjct: 405 --EASKLLYLMLK--DSSY------TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 303 KKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGI 362
D + LL ++ + DV E+ + + N +A+ID + K G + +
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 363 LVFENMR----NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
+ MR ++ YN ++S L G QA++LFEEM PD + + ++
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 419 CHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNF----VLSLMQPV 474
AG +K + + M + P Y ++ G L+EA +F V S +P
Sbjct: 575 LKAGDIKSAESLLVG-MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP- 632
Query: 475 DSGIWGALLSCCDVHGNTE-LAEIVSQQLFDNE 506
D+ I ++L C G T+ L E+V ++L D +
Sbjct: 633 DAHICDSVLKYCISQGETDKLTELV-KKLVDKD 664
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 120/258 (46%), Gaps = 16/258 (6%)
Query: 208 TLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL 267
+L GL+ + G G+ L LK GF N Y + L+ + C N G + L
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILL----KGLCRNLECGKAVSL 164
Query: 268 YQ--------PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
+ PD+ +++ +I GF + ++ +KAL + +G + L+ A +
Sbjct: 165 LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCK 224
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRN----IVS 375
+ + GLE++++V ++LI + CG + G +F+ + R ++
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAIT 284
Query: 376 YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM 435
YN++I G G +A ++FE M+E+G++P+ T +GL+ C G K+ ++ M+
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 436 DEFCIPPRTEHYIHIVKL 453
++ P + I I KL
Sbjct: 345 EKDEEPNAVTYNIIINKL 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 139/336 (41%), Gaps = 29/336 (8%)
Query: 187 GKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSA 246
GK + L MR PD F+ +I G + L + SG +
Sbjct: 159 GKAVSLLREMRR-NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 247 LVNMYSRFKCMNSAYGV-----FIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVA 301
L++ + + M+ A G F+GL + DLV +++LI GF C + + + +
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGL-EADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLG 361
G I +L+ +L ++ +EI +++ G+ N+ + LID G G+G
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID-----GLCGVG 331
Query: 362 I---------LVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
L+ E N V+YN +I+ L GL A A ++ E M ++ +PD T +
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 413 GLLCACCHAGLVKDGQEIFRRMM-DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLM 471
LL C G + + ++ M+ D P Y ++ L L +A + L+
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 472 QPVDSG-------IWGALLSCCDVHGNTELAEIVSQ 500
+ + +G + + L DV+ EL + +S
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 167/368 (45%), Gaps = 24/368 (6%)
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI 125
+ ++ +N+M+ A + D A S +++ML +P+NFTY+ LI G +N D
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWD 540
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIF--ERDLVLC---NAMISGY 180
+ K S+A ++ + +R + C N++I G+
Sbjct: 541 VINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600
Query: 181 SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGL-----MDFSLLGIGQGIHGLCLKS 235
G ++ + M E GK P+ T LI+G MD + L + + + LK
Sbjct: 601 VKVGDTDSAVETYREMSENGK-SPNVVTFTSLINGFCKSNRMDLA-LEMTHEMKSMELK- 657
Query: 236 GFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKA 291
D AY AL++ + + M +AY +F L + P++ +++LI+GF A
Sbjct: 658 -LDLPAY--GALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 292 LFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDM 351
+ Y+ + G D +++ + ++ L ++++ +L G+ + I+ L++
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 352 YLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPD 407
K G + E M+ + N++ Y++VI+G G +AF+L +EMLEKG+ D
Sbjct: 775 LSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHD 834
Query: 408 ESTLSGLL 415
++ + L+
Sbjct: 835 DTVFNLLV 842
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/435 (19%), Positives = 175/435 (40%), Gaps = 24/435 (5%)
Query: 41 ATKILRFYALNDDLISAYNLFDKTPQRSI----FLWNSMIRAFAKAHKFDEALSFYAKML 96
AT ++ Y ++L A +LF++ + + +++ M+ F K + ++A+ FY +M
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407
Query: 97 RTETKPDNFTYACLIRGCHENFDLDG-LRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHV 155
P + +I+GC + + L I + + K V
Sbjct: 408 SVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL--FCKQGKV 465
Query: 156 SEASKVFSGI----FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVG 211
A+ + E ++V N M+ + +F+ M E G +P+ FT
Sbjct: 466 DAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG-LEPNNFTYSI 524
Query: 212 LISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL---- 267
LI G + S F+ N + + ++N + + A + L
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Query: 268 -YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
Y +++++I GF++ D A+ YR +S GK + + SL+ + + L
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLA 644
Query: 327 TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN----RNIVSYNSVISG 382
E+ + L+ ++ ALID + K + +F + N+ YNS+ISG
Sbjct: 645 LEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISG 704
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
G A L+++M+ G+ D T + ++ G + +++ ++D +P
Sbjct: 705 FRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP- 763
Query: 443 RTEHYIHIVKLLGMA 457
+ +H+V + G++
Sbjct: 764 --DEILHMVLVNGLS 776
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 12/292 (4%)
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
NAM+ YS G + K +L + MR+ G PD + LI+ + L + L +
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRG-CVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 234 --KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLY----QPDLVAWSALITGFLQCED 287
SG +A + L++ SR ++ A VF + QPDL ++A+I+ + +C
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 288 YKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSA 347
+A + L + G D + SLL A A+ + E++ + + G + + +
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 348 LIDMYLKCGFVGLGILVFENM-----RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
+I MY K G + L + ++++M RN + ++Y +I LG +A L EML+
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLL 454
G+KP T S L+C AG ++ ++ F M+ P + + + LL
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 12/283 (4%)
Query: 169 DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGL-MDFSLLGIGQG 227
DL N+++S Y+ CG + + +FN M G P ++ L+ L +D L +
Sbjct: 786 DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPS-PTVESINILLHALCVDGRLEELYVV 844
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGFL 283
+ L GF + +++ ++R + ++ + Y P + + +I
Sbjct: 845 VEEL-QDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
+ + + A + A K + + S+L + D + +++ + GLE +
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDET 963
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRN----RNIVSYNSVISGLGLHGLAAQAFKLFEEM 399
+ LI MY + G L+ + MRN + +Y S+IS G QA +LFEE+
Sbjct: 964 TYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 400 LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPP 442
L KGLK D S ++ +G +++ +MM I P
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLL-QMMKNAGIEP 1065
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 165/384 (42%), Gaps = 48/384 (12%)
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLD-GLR 124
+ SI + S++ F ++ +A S M+++ +P+ Y LI G +N +L+ L
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCG 184
+L+ E K G D+V N +++G Y G
Sbjct: 198 LLN-----------------------------EMEKKGLGA---DVVTYNTLLTGLCYSG 225
Query: 185 FWGKGLQLFNGM--REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
W ++ M R I PD T LI + L Q ++ ++S D N
Sbjct: 226 RWSDAARMLRDMMKRSI---NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 243 VGSALVN---MYSRFKCMNSAYGVFI--GLYQPDLVAWSALITGFLQCEDYKKALFFYRN 297
++++N M+ R + + G + P++V ++ LI+GF + + + ++
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCF-PNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 298 LSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGF 357
+S G AD +L+ Q+ +R+ +I +++ + +II L+ G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 358 VGLGILVFENMRNRN----IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSG 413
+ ++ F++MR IV+YN +I GL +A++LF + +G+KPD T +
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 414 LLCACCHAGLVKDGQEIFRRMMDE 437
++ C G ++ E+ RRM +E
Sbjct: 462 MILGLCKNGPRREADELIRRMKEE 485
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 160/386 (41%), Gaps = 48/386 (12%)
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
SI S++ F + ++F EA+S M P+ Y +I G +N DL+
Sbjct: 677 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN----- 731
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYC 183
A +VF + ++ D V N +ISG S
Sbjct: 732 ------------------------------ALEVFYCMEKKGIRADAVTYNTLISGLSNS 761
Query: 184 GFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYV 243
G W +L M + K P+ LI + L + ++ ++ N +
Sbjct: 762 GRWTDAARLLRDMVK-RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 820
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLS 299
++L+N + C+ A +F + PD+V ++ LITGF + + + + + ++
Sbjct: 821 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 880
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
G D +L+ Q + + ++ ++ G+ +I+ + L+D G +
Sbjct: 881 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 940
Query: 360 LGILVFENMR----NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL 415
+++ E+++ + +I++YN +I GL +A+ LF + KG+KPD ++
Sbjct: 941 KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 1000
Query: 416 CACCHAGLVKDGQEIFRRMMDEFCIP 441
C GL ++ ++ RRM ++ +P
Sbjct: 1001 SGLCRKGLQREADKLCRRMKEDGFMP 1026
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 20/252 (7%)
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASL---LVASAQLTDVR 324
+ P++V ++ +I G + D AL + + G +AD + +L L S + TD
Sbjct: 709 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD-- 766
Query: 325 LGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVI 380
+ +++ ++ N+I +ALID ++K G + +++ M R N+ +YNS+I
Sbjct: 767 -AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 825
Query: 381 SGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM----- 435
+G +HG A +F+ M+ KG PD T + L+ C + V+DG ++F M
Sbjct: 826 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 885
Query: 436 -DEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTEL 494
D F Y KL ++ +N ++ D + LL C +G E
Sbjct: 886 GDAFTYNTLIHGYCQAGKL----NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 941
Query: 495 AEIVSQQLFDNE 506
A ++ + L +E
Sbjct: 942 ALVMVEDLQKSE 953
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF 264
D ++ LI S L + G +K G++ + +L++ + + A+ +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 265 IGL----YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVA---S 317
I + Y+P++V ++ LI G + + AL + G AD + +LL S
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 318 AQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENM----RNRNI 373
+ +D + +++ + +++ +ALID+++K G + +++ M + N
Sbjct: 225 GRWSD---AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 374 VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRR 433
V+YNS+I+GL +HG A K F+ M KG P+ T + L+ C +V +G ++F+R
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 434 M 434
M
Sbjct: 342 M 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 5/207 (2%)
Query: 270 PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEI 329
P +V ++ L+T Y+ ++F + + + G D L+ + + + +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 330 HGYVLRHGLESNIIVSSALIDMYLKCGFVG----LGILVFENMRNRNIVSYNSVISGLGL 385
G +++ G E +I+ +L+ + +G L IL+ ++ N+V YN++I GL
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 386 HGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTE 445
+G A +L EM +KGL D T + LL C++G D + R MM I P
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR-SINPDVV 247
Query: 446 HYIHIVKLLGMAGELEEAYNFVLSLMQ 472
+ ++ + G L+EA ++Q
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQ 274
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
DL +++ LI F +C AL + G + + SLL + + +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 331 GYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLH 386
+++ G E N++V + LID K G + + + + M + ++V+YN++++GL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 387 GLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEH 446
G + A ++ +M+++ + PD T + L+ G + + QE+++ M+ + P
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVT 283
Query: 447 YIHIVKLLGMAGELEEA 463
Y I+ L M G L +A
Sbjct: 284 YNSIINGLCMHGRLYDA 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 132/303 (43%), Gaps = 10/303 (3%)
Query: 169 DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
DL +I + C L + M ++G +P T L+ G + +G +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLG-YEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQ 284
L +KSG++ N V + L++ + +N A + + + D+V ++ L+TG
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIV 344
+ A R++ D + +L+ + ++ E++ +++ ++ N +
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEML 400
+++I+ G + F+ M ++ N+V+YN++ISG + + KLF+ M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 401 EKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGEL 460
+G D T + L+ C G ++ +IF M+ P H I ++ L + GE+
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI-LLHGLCVNGEI 402
Query: 461 EEA 463
E A
Sbjct: 403 ESA 405
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 174/405 (42%), Gaps = 19/405 (4%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
+N +I K + +EA +ML PD+ TY L+ G + +D + L
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER-----DLVLCNAMISGYSYCGFW 186
+ + +A V S + D+ N++I GY G
Sbjct: 350 KPEIVIFNTLIH----GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 187 GKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSA 246
G L++ + MR G +P+ ++ L+ G + + G N +
Sbjct: 406 GLALEVLHDMRNKG-CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 247 LVNMYSRFKCMNSAYGVFIGLY----QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAG 302
L++ + + + A +F + +PD+ +++LI+G + ++ K AL+ R++ G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 303 KKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGI 362
A+ + +L+ A + +++ ++ ++ G + I ++LI + G V
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 363 LVFENM----RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC 418
+FE M + +S N +I+GL G+ +A + +EM+ +G PD T + L+
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 419 CHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEA 463
C AG ++DG +FR++ E IPP T + ++ L G + +A
Sbjct: 645 CRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 189/474 (39%), Gaps = 49/474 (10%)
Query: 58 YNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR----- 112
Y++ + ++F + +++AF ++ D ALS M + P++ Y LI
Sbjct: 206 YDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC 265
Query: 113 ----------------GC---HENFD--LDGL----RILHXXXXXXXXXXXXXXXXXXXT 147
GC E F+ + GL RI
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 148 AY-----SKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ 202
Y K V A +F I + ++V+ N +I G+ G + + M
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 203 QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG 262
PD T LI G L+G+ + G N Y + LV+ + + ++ AY
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 263 VFIGL----YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
V + +P+ V ++ LI+ F + +A+ +R + G K D SL+
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG-----LGILVFENMRNRNI 373
++ +++ + ++ G+ +N + + LI+ +L+ G + + +VF+ +
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG-SPLDE 564
Query: 374 VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRR 433
++YNS+I GL G +A LFE+ML G P + + L+ C +G+V++ E F++
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE-FQK 623
Query: 434 MMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ---PVDSGIWGALLS 484
M P + ++ L AG +E+ L P D+ + L+S
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 152/382 (39%), Gaps = 43/382 (11%)
Query: 56 SAYNLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTE-TKPDNFTYACLIRG- 113
+A +LF + P+ I ++N++I F + D+A + + M+ + PD TY LI G
Sbjct: 340 AAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 114 CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI----FERD 169
E L +LH + K + EA V + + + +
Sbjct: 400 WKEGLVGLALEVLH-DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 170 LVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIH 229
V N +IS + + +++F M G +PD +T LISGL + + + H
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKG-CKPDVYTFNSLISGLCE-----VDEIKH 512
Query: 230 GLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYK 289
L L L +M S N+ V ++ LI FL+ + K
Sbjct: 513 ALWL-------------LRDMISEGVVANT-------------VTYNTLINAFLRRGEIK 546
Query: 290 KALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALI 349
+A + G D I SL+ + +V + +LR G + I + LI
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 350 DMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLK 405
+ + G V + + M R +IV++NS+I+GL G +F ++ +G+
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 406 PDESTLSGLLCACCHAGLVKDG 427
PD T + L+ C G V D
Sbjct: 667 PDTVTFNTLMSWLCKGGFVYDA 688
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 165/384 (42%), Gaps = 16/384 (4%)
Query: 70 FLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXX 129
F + ++I +K EA++ +M++ +PD TY ++ G + D+D L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 130 XXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGF 185
+ K+ HV A +F+ + + ++V N++I+ G
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 186 WGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGS 245
W +L + M E K P+ T LI L + +H ++ D + +
Sbjct: 309 WSDASRLLSNMLE-KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 246 ALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVA 301
L+N + ++ A +F + P++ ++ LI GF +C+ + + +R +S
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLG 361
G + + +++ Q D + ++ + + ++I+ S L+ G +
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 362 ILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCA 417
+++F+ ++ NI YN++I G+ G +A+ LF + +KPD T + ++
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISG 544
Query: 418 CCHAGLVKDGQEIFRRMMDEFCIP 441
C L+++ ++FR+M ++ +P
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLP 568
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 164/399 (41%), Gaps = 76/399 (19%)
Query: 52 DDLISAY-NLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACL 110
DD + + ++ P SI +N ++ A AK +KF+ +S +M D +TY+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI----F 166
I + + S +S A V + + +
Sbjct: 125 I-----------------------------------NCFCRRSQLSLALAVLAKMMKLGY 149
Query: 167 ERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQ 226
E D+V +++++GY + + L + M E+G +PD FT LI
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLI------------- 195
Query: 227 GIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCE 286
HGL L + A ALV+ + C QPDLV + ++ G +
Sbjct: 196 --HGLFLHN----KASEAVALVDQMVQRGC------------QPDLVTYGTVVNGLCKRG 237
Query: 287 DYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSS 346
D AL + A KA+ ++ +++ + + V + ++ + G+ N++ +
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 347 ALIDMYLKCGFVGLGILVFENMR----NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEK 402
+LI+ G + NM N N+V++N++I G +A KL EEM+++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 403 GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
+ PD T + L+ C + + +++F+ M+ + C+P
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 10/251 (3%)
Query: 59 NLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHEN 117
N+ +K ++ +N++I AF K K EA + +M++ PD TY LI G C N
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 118 FDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL----VLC 173
LD + + + K V + ++F + +R L V
Sbjct: 378 -RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQP-DGFTLVGLISGLMDFSLLGIGQGIHGLC 232
+I G+ G +F M + + P D T L+ GL + L I
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQM--VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 233 LKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKA 291
KS + N ++ + ++ + + A+ +F L +PD+V ++ +I+G ++A
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 292 LFFYRNLSVAG 302
+R + G
Sbjct: 555 DDLFRKMKEDG 565
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 164/382 (42%), Gaps = 13/382 (3%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
+ ++I +K EA++ +M++ +P+ TY ++ G + D+D L
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 252
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWG 187
+ K+ H +A +F+ + + +++ +++IS W
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
+L + M E K P+ T LI + L + ++ +K D + + S+L
Sbjct: 313 DASRLLSDMIE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 248 VNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
+N + ++ A +F + P++V ++ LI GF + + + + +R +S G
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
+ + +L+ Q D + ++ G+ NI+ + L+D K G + ++
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 364 VFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
VFE ++ I +YN +I G+ G + LF + KG+KPD + ++ C
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Query: 420 HAGLVKDGQEIFRRMMDEFCIP 441
GL ++ +FR+M ++ +P
Sbjct: 552 RKGLKEEADALFRKMREDGPLP 573
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 161/396 (40%), Gaps = 49/396 (12%)
Query: 52 DDLISAYN-LFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACL 110
DD I + + P SIF +N ++ A AK KFD +S KM R + +TY L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA----SKVFSGIF 166
I + + S +S A K+ +
Sbjct: 127 I-----------------------------------NCFCRRSQISLALALLGKMMKLGY 151
Query: 167 ERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQ 226
E +V +++++GY + + L + M E+G +PD T LI GL +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAV 210
Query: 227 GIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGF 282
+ ++ G N +VN + ++ A+ + + + ++V +S +I
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 283 LQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
+ AL + + G + + I +SL+ + + ++ + N+
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEE 398
+ +ALID ++K G + +++ M R +I +Y+S+I+G +H +A +FE
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 399 MLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
M+ K P+ T + L+ C A + +G E+FR M
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 156/376 (41%), Gaps = 56/376 (14%)
Query: 53 DLISAYNLFDKTP----QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYA 108
D+ A+NL +K + ++ +++++I + K D+AL+ + +M +P+ TY+
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 109 CLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER 168
LI + + S+AS++ S + ER
Sbjct: 300 SLI-----------------------------------SCLCNYERWSDASRLLSDMIER 324
Query: 169 ----DLVLCNAMISGYSYCGFWGKGLQLFNGM--REIGKQQPDGFTLVGLISGLMDFSLL 222
++V NA+I + G + +L++ M R I PD FT LI+G L
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCMHDRL 381
Query: 223 GIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLV----AWSAL 278
+ + L + N + L+N + + K ++ +F + Q LV ++ L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 279 ITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGL 338
I GF Q D A ++ + G + + +LL + + + Y+ R +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 339 ESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFK 394
E I + +I+ K G V G +F ++ + +++ YN++ISG GL +A
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 395 LFEEMLEKGLKPDEST 410
LF +M E G PD T
Sbjct: 562 LFRKMREDGPLPDSGT 577
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/545 (21%), Positives = 216/545 (39%), Gaps = 71/545 (13%)
Query: 5 FSSLLQELTKSHQTRSRT---KQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
+SSL+ L K S K++ L L+ ++ + T +R + AY +
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNV----YTFTICIRVLGRAGKINEAYEIL 281
Query: 62 DKTPQR----SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHEN 117
+ + + +I A A K D A + KM KPD TY L+ +N
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341
Query: 118 FDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMI 177
DLD ++ + K HV D+V ++
Sbjct: 342 RDLDSVK-------------------QFWSEMEKDGHVP------------DVVTFTILV 370
Query: 178 SGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGF 237
G +G+ + MR+ G P+ T LI GL+ L + G G
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQG-ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 238 DCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGFLQCEDYKKALF 293
AY ++ Y + SA F + P++VA +A + + ++A
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 294 FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYL 353
+ L G D + ++ +++ ++ ++ ++ +G E ++IV ++LI+
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 354 KCGFVGLGILVFENMR----NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDES 409
K V +F M+ +V+YN++++GLG +G +A +LFE M++KG P+
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 609
Query: 410 TLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLS 469
T + L C V ++ +MMD C+P Y I+ L G+++EA F
Sbjct: 610 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD-VFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Query: 470 LMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNIYASDGR---- 525
+ + V + ++ C T L +V L ++ AYK++ + +Y +
Sbjct: 669 MKKLV----YPDFVTLC-----TLLPGVVKASLIED-----AYKIITNFLYNCADQPANL 714
Query: 526 -WDDV 529
W+D+
Sbjct: 715 FWEDL 719
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 162/431 (37%), Gaps = 17/431 (3%)
Query: 70 FLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXX 129
+ +N +I K+ EA+ Y +M+ +P TY+ L+ G + D+D + L
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
Query: 130 XXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGF 185
+ ++EA ++ + + D+V +I
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 186 WGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGS 245
++F M+ G+ +PD T + L+ D L + K G + +
Sbjct: 309 LDCAKEVFEKMK-TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 246 ALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVA 301
LV+ + A+ + P+L ++ LI G L+ AL + N+
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 302 GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLG 361
G K + + D E + G+ NI+ +A + K G
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 362 ILVFENMRN----RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCA 417
+F +++ + V+YN ++ G +A KL EM+E G +PD ++ L+
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 418 CCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ---PV 474
A V + ++F R M E + P Y ++ LG G+++EA ++Q P
Sbjct: 548 LYKADRVDEAWKMFMR-MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 475 DSGIWGALLSC 485
++ + L C
Sbjct: 607 NTITFNTLFDC 617
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 175/485 (36%), Gaps = 91/485 (18%)
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI 125
+ + + NS+I KA + DEA + +M + KP TY L+ G +N +
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE----RDLVLCNAMISGYS 181
L K V+ A K+ + + D+ N +I G
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 182 YCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI------------- 228
G + + F+ M+++ PD TL L+ G++ SL+ I
Sbjct: 655 KNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPA 712
Query: 229 --------HGLCLKSGFDCNAYV-------------GSALVNMYSRFKCMNSAYGVFIGL 267
+ ++G D NA G +++ R+ C ++ L
Sbjct: 713 NLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 268 Y---------QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASA 318
+ QP L ++ LI G L+ + + A + + G D LL A
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 319 QLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGI-LVFENMRNR------ 371
+ + E++ + H E+N I + +I +K G V + L ++ M +R
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 372 ---------------------------------NIVSYNSVISGLGLHGLAAQAFKLFEE 398
N YN +I+G G G A A LF+
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 399 MLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAG 458
M+++G++PD T S L+ C G V +G F+ + E + P Y I+ LG +
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE-LKESGLNPDVVCYNLIINGLGKSH 1010
Query: 459 ELEEA 463
LEEA
Sbjct: 1011 RLEEA 1015
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 165/411 (40%), Gaps = 18/411 (4%)
Query: 69 IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHX 128
+ +N MI + KA + + ALS +M PD TY ++R ++ L +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 129 XXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCG 184
A + S V A K+ + +R D+V N +++G G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
+ ++ N M G QP+ T ++ + + + L+ GF +
Sbjct: 289 RLDEAIKFLNDMPSSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 245 SALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSV 300
+ L+N R + A + + Q P+ ++++ L+ GF + + +A+ + +
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 301 AGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGL 360
G D + ++L A + V EI + G +I + +ID K G G
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 361 GILVFENMRNRNI----VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLC 416
I + + MR +++ ++Y+S++ GL G +A K F E G++P+ T + ++
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 417 ACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLL--GMAGELEEAYN 465
C + + M++ C P T + I I L GMA E E N
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 155/415 (37%), Gaps = 68/415 (16%)
Query: 73 NSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXX 132
N+ +R + + +E F M+ PD LIRG
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG------------------- 146
Query: 133 XXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE-----RDLVLCNAMISGYSYCGFWG 187
+ + +A+K+ I E D++ N MISGY G
Sbjct: 147 ----------------FCRLGKTRKAAKILE-ILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
L + + M PD T ++ L D L + L+ DC Y
Sbjct: 190 NALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR--DC--YPDVIT 241
Query: 248 VNMYSRFKCMNSAYGVFIGLYQ--------PDLVAWSALITGFLQCEDYKKALFFYRNLS 299
+ C +S G + L PD+V ++ L+ G + +A+ F ++
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 300 VAGKKADPI---LIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG 356
+G + + I +I + ++ + D ++ +LR G +++ + LI+ + G
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAE---KLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 357 FVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
+G I + E M N +SYN ++ G +A + E M+ +G PD T +
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFV 467
+L A C G V+D EI ++ + C P Y ++ L AG+ +A +
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT-YNTVIDGLAKAGKTGKAIKLL 472
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 289 KKALFFYRNLSVAGKKAD-PIL--IASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVS 345
KKA+ ++ G D P L IA L + L + ++ +H ++ S+I
Sbjct: 163 KKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKV---VHEFITSSVGISDISAY 219
Query: 346 SALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLK 405
+++I+MY CG V + VF +M RN+ ++ VI +G A F ++G K
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 406 PDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYN 465
PD + AC G + +G F M E+ I P EHY+ +VK+L G L+EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 466 FVLSLMQPVDSGIWGALLSCCDVHGN-------TELAEIVSQQLFDNEPRKGAYKVMLSN 518
FV S+ VD +W L++ VHG+ ++ E + + E + G V S+
Sbjct: 340 FVESMEPNVD--LWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSD 397
Query: 519 I 519
+
Sbjct: 398 L 398
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/517 (21%), Positives = 211/517 (40%), Gaps = 21/517 (4%)
Query: 3 VKFSSLLQELTKSHQTR---SRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYN 59
V+F+ LL + K ++ S +Q+ L + L S + R L+ L
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 60 LFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFD 119
+ + I +S++ + + + +A++ +M+ KPD FT+ LI G +
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 120 LDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA----SKVFSGIFERDLVLCNA 175
L K + A K+ G E D+V+ N
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 176 MISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKS 235
+I G L LF M G +PD FT LIS L ++ + ++
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 236 GFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKA 291
+ N SAL++ + + + A ++ + + PD+ +S+LI GF + +A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 292 LFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDM 351
+ + + + ++L+ + V G E+ + + GL N + + LI
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 352 YLKCGFVGLGILVFENMRN----RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPD 407
+ + +VF+ M + NI++YN ++ GL +G A+A +FE + ++PD
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 408 ESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFV 467
T + ++ C AG V+DG E+F + + + P Y ++ G EEA + +
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 468 LSLMQ--PV-DSGIWGALLSCCDVHGNTEL-AEIVSQ 500
+ + P+ +SG + L+ G+ E AE++ +
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 164/412 (39%), Gaps = 81/412 (19%)
Query: 52 DDLISAY-NLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACL 110
DD + + ++ P SI +N ++ A AK +KF+ +S +M D +TY+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI----F 166
I + + S +S A V + + +
Sbjct: 125 I-----------------------------------NCFCRRSQLSLALAVLAKMMKLGY 149
Query: 167 ERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLM--------- 217
E D+V +++++GY + + L + M E+G +PD FT LI GL
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 218 -----------DFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIG 266
L+ G ++GLC + D S K M G
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL----------ALSLLKKMEK------G 252
Query: 267 LYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
+ D+V ++ +I G + + AL + + G + D +SL+
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 327 TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISG 382
+ + ++ + N++ SALID ++K G + +++ M R +I +Y+S+I+G
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
+H +A +FE M+ K P+ T S L+ C A V++G E+FR M
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 155/383 (40%), Gaps = 52/383 (13%)
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRI 125
+ + ++N++I K D+AL+ + +M +PD FTY+ LI
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI-------------- 300
Query: 126 LHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYS 181
+ + S+AS++ S + ER ++V +A+I +
Sbjct: 301 ---------------------SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 182 YCGFWGKGLQLFNGM--REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDC 239
G + +L++ M R I PD FT LI+G L + + L +
Sbjct: 340 KEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 240 NAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLV----AWSALITGFLQCEDYKKALFFY 295
N S L+ + + K + +F + Q LV ++ LI GF Q D A +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 296 RNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKC 355
+ + G + + LL + + + Y+ R +E +I + +I+ K
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 356 GFVGLGILVFENMR----NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTL 411
G V G +F N+ + N+++YN++ISG G +A L ++M E G P+ T
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 412 SGLLCACCHAGLVKDGQEIFRRM 434
+ L+ A G + E+ + M
Sbjct: 577 NTLIRARLRDGDREASAELIKEM 599
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 166/418 (39%), Gaps = 44/418 (10%)
Query: 29 ILRSHLSHESFYATKILRFYALNDDLISAYNLF----DKTPQRSIFLWNSMIRAFAKAHK 84
I S ES+ ++LR + +L A LF P SI ++ ++ A AK +K
Sbjct: 639 ICSSESCGESYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNK 698
Query: 85 FDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXX 144
FD +SF KM + +TY LI C
Sbjct: 699 FDLVISFGEKMEILGISHNLYTYNILI-NCF----------------------------- 728
Query: 145 XXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
++ K+ +E D+V N++++G+ + + L + M E+G +P
Sbjct: 729 -CRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG-YKP 786
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVF 264
D T LI GL + + ++ G + A+VN + + A +
Sbjct: 787 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 846
Query: 265 IGL----YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQL 320
+ + ++V +S +I + AL + + G + + I +SL+
Sbjct: 847 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 906
Query: 321 TDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSY 376
+ + ++ + N++ SALID ++K G + ++E M R NI +Y
Sbjct: 907 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 966
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
+S+I+G + +A ++ E M+ K P+ T + L+ C A V G E+FR M
Sbjct: 967 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 1024
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 136/324 (41%), Gaps = 13/324 (4%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
+ ++I +K EA++ +M++ +PD TY ++ G + D D L
Sbjct: 791 FTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME 850
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWG 187
+ K+ H +A +F+ + + +++ +++IS G W
Sbjct: 851 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS 910
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
+L + M E K P+ T LI + L + ++ +K D N + S+L
Sbjct: 911 DASRLLSDMIE-RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 969
Query: 248 VNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
+N + + A + + + P++V ++ LI GF + + K + +R +S G
Sbjct: 970 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 1029
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
+ + +L+ Q D + ++ G+ NI+ + L+D K G + ++
Sbjct: 1030 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 1089
Query: 364 VFENMRNR----NIVSYNSVISGL 383
VFE ++ +I +YN +I G+
Sbjct: 1090 VFEYLQRSTMEPDIYTYNIMIEGM 1113
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 153/383 (39%), Gaps = 25/383 (6%)
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLRIL 126
+++ +N +I F + + AL+ KM++ +PD T L+ G CH N D + ++
Sbjct: 717 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 776
Query: 127 HXXXXXXXXXXXXXXXXXXXTAYSKFSH--VSEASKVFSGIFER----DLVLCNAMISGY 180
+ F H SEA + + +R DLV A+++G
Sbjct: 777 DQMVEMGYKPDTVTFTTLI---HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 833
Query: 181 SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCN 240
G L L N M E K + + +I L + + G N
Sbjct: 834 CKRGDTDLALNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 892
Query: 241 AYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYR 296
S+L++ + + A + + + P+LV +SALI F++ KA Y
Sbjct: 893 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 952
Query: 297 NLSVAGKKADP-ILIASLLVASAQLTDVRLG--TEIHGYVLRHGLESNIIVSSALIDMYL 353
+ + DP I S L+ + D RLG ++ ++R N++ + LI+ +
Sbjct: 953 EM--IKRSIDPNIFTYSSLINGFCMLD-RLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 1009
Query: 354 KCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDES 409
K V G+ +F M R N V+Y ++I G A +F++M+ G+ P+
Sbjct: 1010 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 1069
Query: 410 TLSGLLCACCHAGLVKDGQEIFR 432
T + LL C G + +F
Sbjct: 1070 TYNILLDGLCKNGKLAKAMVVFE 1092
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 164/385 (42%), Gaps = 15/385 (3%)
Query: 66 QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLR 124
+ ++ +N +I F + ALS KML+ +PD T L+ G C N D +
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGY 180
++ + K V++A F I + ++V A+++G
Sbjct: 177 LVDKMVEIGYKPDIVAYNAII-DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 181 SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCN 240
W +L + M + K P+ T L+ + + + + ++ D +
Sbjct: 236 CNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 241 AYVGSALVN---MYSRFKCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKALFFYR 296
S+L+N ++ R N + + + D+V+++ LI GF + + + + +R
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG 356
+S G ++ + +L+ Q DV E + G+ +I + L+ G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 357 FVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
+ +++FE+M+ R +IV+Y +VI G+ G +A+ LF + KGLKPD T +
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDE 437
++ C GL+ + + ++ +M E
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 222 LGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYG-----VFIGLYQPDLVAWS 276
+ + I G LK G++ + +LVN + R ++ A V IG Y+PD+VA++
Sbjct: 136 VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG-YKPDIVAYN 194
Query: 277 ALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASL---LVASAQLTDVRLGTEIHGYV 333
A+I + + A F++ + G + + + +L L S++ +D + +
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD---AARLLSDM 251
Query: 334 LRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR----NRNIVSYNSVISGLGLHGLA 389
++ + N+I SAL+D ++K G V +FE M + +IV+Y+S+I+GL LH
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 390 AQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIH 449
+A ++F+ M+ KG D + + L+ C A V+DG ++FR M + + T Y
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE-MSQRGLVSNTVTYNT 370
Query: 450 IVKLLGMAGELEEAYNF 466
+++ AG++++A F
Sbjct: 371 LIQGFFQAGDVDKAQEF 387
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 153/373 (41%), Gaps = 54/373 (14%)
Query: 57 AYNLFDKTPQ----RSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
A +L DK + I +N++I + K + ++A F+ ++ R +P+ TY L+
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 113 G-CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER--- 168
G C+ S S+A+++ S + ++
Sbjct: 234 GLCNS------------------------------------SRWSDAARLLSDMIKKKIT 257
Query: 169 -DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQG 227
+++ +A++ + G + +LF M + PD T LI+GL +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVA----WSALITGFL 283
+ L + G + + L+N + + K + +F + Q LV+ ++ LI GF
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
Q D KA F+ + G D LL ++ I + + ++ +I+
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEM 399
+ +I K G V +F ++ + +IV+Y +++SGL GL + L+ +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 400 LEKGLKPDESTLS 412
++GL ++ TLS
Sbjct: 497 KQEGLMKNDCTLS 509
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 50/306 (16%)
Query: 149 YSKFSHVSEASKVFSGIFERDL----VLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQP 204
+ K ++S+A KVF I +R L V N +I+GY G +G +L + M E + +P
Sbjct: 250 FCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM-EKSRTRP 308
Query: 205 DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSR---FKCMNSAY 261
D FT LI+ L + + G+ K G N + + L++ +SR M +Y
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 262 GVFI--GLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQ 319
+ GL QPD+V ++ L+ GF + D LVA+
Sbjct: 369 QKMLSKGL-QPDIVLYNTLVNGFCKNGD--------------------------LVAARN 401
Query: 320 LTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNI----VS 375
+ D ++R GL + I + LID + + G V + + + M I V
Sbjct: 402 IVD---------GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVG 452
Query: 376 YNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM 435
+++++ G+ G A + EML G+KPD+ T + ++ A C G + G ++ + M
Sbjct: 453 FSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ 512
Query: 436 DEFCIP 441
+ +P
Sbjct: 513 SDGHVP 518
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 21/298 (7%)
Query: 156 SEASKVFSGIFERDLV-----LCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLV 210
+ AS VF + E + L +A++ Y+ GF +Q F R+ P +
Sbjct: 151 NSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVP----IR 206
Query: 211 G---LISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL 267
G L+ +M + G G + L +GF N YV + L+N + + ++ A VF +
Sbjct: 207 GCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEI 266
Query: 268 ----YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDV 323
QP +V+++ LI G+ + + + + + + D ++L+ A + +
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKM 326
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSV 379
+ + + GL N ++ + LI + + G + L ++ M ++ +IV YN++
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
++G +G A + + M+ +GL+PD+ T + L+ C G V+ EI R+ MD+
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI-RKEMDQ 443
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 149/379 (39%), Gaps = 55/379 (14%)
Query: 53 DLISAYNLFDKTPQRS----IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYA 108
++ A +FD+ +RS + +N++I + K DE +M ++ T+PD FTY+
Sbjct: 255 NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 109 CLIRG-CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHV----SEASKVFS 163
LI C EN +DG L +S+ + K+ S
Sbjct: 315 ALINALCKEN-KMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLS 373
Query: 164 GIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLG 223
+ D+VL N +++G+ G + +GM G +PD T LI G
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG-LRPDKITYTTLIDGFCRG---- 428
Query: 224 IGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFL 283
G L ++ D N + D V +SAL+ G
Sbjct: 429 -GDVETALEIRKEMDQNG--------------------------IELDRVGFSALVCGMC 461
Query: 284 Q---CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLES 340
+ D ++AL R + AG K D + ++ A + D + G ++ + G
Sbjct: 462 KEGRVIDAERAL---REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 341 NIIVSSALIDMYLKCGFVGLGILVFENMRNRNIV----SYNSVISGLGLHGLAAQAFKLF 396
+++ + L++ K G + ++ + M N +V +YN+++ G H A + K +
Sbjct: 519 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG---HHRHANSSKRY 575
Query: 397 EEMLEKGLKPDESTLSGLL 415
+ E G+ D ++ ++
Sbjct: 576 IQKPEIGIVADLASYKSIV 594
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 179/431 (41%), Gaps = 17/431 (3%)
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
SI NS++ F ++ EA++ +M+ +PD T+ L+ G ++ L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA----SKVFSGIFERDLVLCNAMISGYSYC 183
K A +K+ G E D+V+ + +I
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 184 GFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYV 243
L LF M G +PD FT LIS L ++ + L+ + N
Sbjct: 254 RHVDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLS 299
++L++ +++ + A +F + Q P++V +++LI GF + +A + +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
D + +L+ + V G E+ + R GL N + + LI + +
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 360 LGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL 415
+VF+ M + NI++YN+++ GL +G +A +FE + + ++PD T + +
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 416 CACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ--P 473
C AG V+DG ++F + + + P Y ++ G EEAY + + + P
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 474 V-DSGIWGALL 483
+ DSG + L+
Sbjct: 552 LPDSGTYNTLI 562
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 172/435 (39%), Gaps = 85/435 (19%)
Query: 32 SHLSHESFYATKILRFYALNDDLISAYNLFDKT----PQRSIFLWNSMIRAFAKAHKFDE 87
S LS++ Y K+ R L+ L A +LF + P SI ++ ++ A AK KFD
Sbjct: 25 SGLSYDG-YREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDL 83
Query: 88 ALSFYAKMLRTETKPDNFTYA----CLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXX 143
+SF KM + +TY CL R +F L IL
Sbjct: 84 VISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSF---ALAIL----------------- 123
Query: 144 XXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQ 203
K+ + +V N++++G+ + + + L + M E+G Q
Sbjct: 124 ---------------GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG-YQ 167
Query: 204 PDGFTLVGLISGLMDFS--------------------LLGIGQGIHGLCLKSGFDCNAYV 243
PD T L+ GL + L+ G I+GLC + D +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD----L 223
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
L+N + G + D+V +S +I + AL + + G
Sbjct: 224 ALNLLNKMEK------------GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
+ D +SL+ + + +L + N++ ++LID + K G +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 364 VFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
+F+ M R NIV+YNS+I+G +H +A ++F M+ K PD T + L+ C
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 420 HAGLVKDGQEIFRRM 434
A V DG E+FR M
Sbjct: 392 KAKKVVDGMELFRDM 406
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 163/397 (41%), Gaps = 79/397 (19%)
Query: 57 AYNLFDKTP----QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
A NL +K + + +++++I + K D+AL+ + +M +PD FTY+ LI
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI- 282
Query: 113 GCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER---- 168
+ + S+AS++ S + ER
Sbjct: 283 ----------------------------------SCLCNYGRWSDASRLLSDMLERKINP 308
Query: 169 DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
++V N++I ++ G + +LF+ M I +D +++ I
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEM----------------IQRSIDPNIVTYNSLI 352
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDY 288
+G C+ D + + +V+ C+ PD+V ++ LI GF + +
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSK----DCL------------PDVVTYNTLINGFCKAKKV 396
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
+ +R++S G + + +L+ Q +D + ++ G+ NI+ + L
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 349 IDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
+D K G + ++VFE ++ +I +YN + G+ G + LF + KG+
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
KPD + ++ C GL ++ +F +M ++ +P
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 7/238 (2%)
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
KKAL+ L+ D + L + ++ +HG + ++ + L
Sbjct: 236 KKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVL 295
Query: 349 IDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
++MY CG VFE M +N+ ++ +I +G A +F E+G PD
Sbjct: 296 LEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDG 355
Query: 409 STLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVL 468
G+ AC G V +G F M ++ I P E Y+ +V++ + G L+EA FV
Sbjct: 356 QLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVE 415
Query: 469 SLMQPVDSGIWGALLSCCDVHGNTEL----AEIVS---QQLFDNEPRKGAYKVMLSNI 519
+ + +W L++ VHGN EL AE+V + + R+G V S++
Sbjct: 416 RMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDV 473
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 18/275 (6%)
Query: 242 YVGSALVNMYSRFK--------CMNSAYGVFIGLYQPDLVAWSALITGF----LQCEDYK 289
Y S + M +R+K NS G + P VA + I F +Q +++
Sbjct: 44 YGSSEITEMINRYKRNVAGHTLTQNSMVGQYKTTVSPS-VAQNVTIETFDSLCIQ-GNWR 101
Query: 290 KALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALI 349
+A+ L G D I + L + + +H ++ ++ +A+I
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 350 DMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDES 409
+MY C V + VFE M N + ++ +G +A LF E+G KP+
Sbjct: 162 EMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGE 221
Query: 410 TLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLS 469
+ + C G VK+G F+ M E+ I P EHY + K+L +G L+EA NFV
Sbjct: 222 IFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVER 281
Query: 470 LMQPVDSGIWGALLSCCDVHGNTEL----AEIVSQ 500
+ +W L++ VHG+ EL AE+V +
Sbjct: 282 MPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEK 316
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 162/385 (42%), Gaps = 21/385 (5%)
Query: 73 NSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLRILHXXXX 131
N ++ F + + ALSF KM++ +P T+ L+ G C + D L +
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWG 187
K V A + + + + D+V N++ISG G W
Sbjct: 180 MGYKPNVVIYNTII-DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 188 KGLQLFNGM--REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGS 245
++ + M REI PD FT LI + + + + ++ D + S
Sbjct: 239 DATRMVSCMTKREI---YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 246 ALVN---MYSRFKCMNSAYGVFI--GLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSV 300
L+ MYSR +G + G + PD+V +S LI G+ + + + + + +S
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 301 AGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGL 360
G + + L+ + + + EI ++ G+ NII + L+ G +
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 361 GILVFENMR----NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLC 416
+++ +M+ + +IV+YN +I G+ G A A+ ++ + +GL PD T + ++
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 417 ACCHAGLVKDGQEIFRRMMDEFCIP 441
GL ++ +FR+M ++ +P
Sbjct: 475 GLYKKGLRREADALFRKMKEDGILP 499
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGT 327
++P +V + +L+ GF + + AL+ + + G K + ++ +++ + V
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 328 EIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGL 383
++ + + G+ +++ ++LI G + M R ++ ++N++I
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
G ++A + +EEM+ + L PD T S L+ C + + +E+F M+ + C P
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 444 TEHYIHI 450
+ I I
Sbjct: 327 VTYSILI 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 5/197 (2%)
Query: 271 DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIH 330
+L + L+ F +C AL F + G + + SLL + V +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 331 GYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLH 386
++ G + N+++ + +ID K V + + M ++V+YNS+ISGL
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 387 GLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEH 446
G + A ++ M ++ + PD T + L+ AC G V + +E + M+ + P
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPDIVT 293
Query: 447 YIHIVKLLGMAGELEEA 463
Y ++ L M L+EA
Sbjct: 294 YSLLIYGLCMYSRLDEA 310
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 162/396 (40%), Gaps = 49/396 (12%)
Query: 52 DDLISAYN-LFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACL 110
DD I + + P SI +N ++ A AK KFD +S KM R E +TY L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 111 IRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA----SKVFSGIF 166
I + + S +S A K+ +
Sbjct: 127 I-----------------------------------NCFCRRSQISLALALLGKMMKLGY 151
Query: 167 ERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQ 226
E +V +++++GY + + L + M E+G +PD T LI GL +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAV 210
Query: 227 GIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGF 282
+ ++ G N +VN + + A + + + D+V ++ +I
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 283 LQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNI 342
+ AL ++ + G + + + +SL+ +++ ++ + N+
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 343 IVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEE 398
+ +ALID ++K G ++++M R +I +YNS+++G +H +A ++FE
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 399 MLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
M+ K PD T + L+ C + V+DG E+FR M
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 160/382 (41%), Gaps = 13/382 (3%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
+ ++I +K EA++ +M++ +P+ TY ++ G + D D L
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 252
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWG 187
+ K+ HV +A +F + + ++V +++IS G W
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
QL + M E K P+ T LI + + ++ +K D + + ++L
Sbjct: 313 DASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 248 VNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
VN + ++ A +F + PD+V ++ LI GF + + + +R +S G
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
D + +L+ D ++ ++ G+ +I+ S L+D G + +
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 364 VFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
VF+ M+ +I Y ++I G+ G + LF + KG+KP+ T + ++ C
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 420 HAGLVKDGQEIFRRMMDEFCIP 441
L+++ + ++M ++ +P
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLP 573
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 93/232 (40%), Gaps = 9/232 (3%)
Query: 59 NLFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENF 118
++ +K ++ +N++I AF K KF EA Y M++ PD FTY L+ G +
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 119 DLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCN 174
LD + + + K V + +++F + R D V
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 175 AMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLK 234
+I G + G ++F M G PD T L+ GL + L + K
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 235 SGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGF 282
S + Y+ + ++ + ++ + +F L +P++V ++ +I+G
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 167/403 (41%), Gaps = 23/403 (5%)
Query: 73 NSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLI-RGC---HENFDLDGLRILHX 128
+++I + EAL +M+ +PD TY ++ R C + LD R +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 129 XXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI----FERDLVLCNAMISGYSYCG 184
+ K +A +F+ + + D+V +++I G G
Sbjct: 239 RNIKASVVQYSIVI----DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 185 FWGKGLQLFNGMREIGKQQ-PDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYV 243
W G ++ M IG+ PD T LI + L + ++ + G +
Sbjct: 295 KWDDGAKMLREM--IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLY----QPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
++L++ + + C++ A +F + +PD+V +S LI + + + + +R +S
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
G + I +L++ Q + E+ ++ G+ +++ L+D G +
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 360 LGILVFENMRNRNIV----SYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL 415
+ +FE M+ + YN +I G+ A+ LF + +KG+KPD T + ++
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 416 CACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAG 458
C G + + +FR+M ++ C P + I I LG +G
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 153/334 (45%), Gaps = 14/334 (4%)
Query: 166 FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIG 225
+E D + + +++G+ G + + L + M E+ KQ+PD T+ LI+GL +
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM-KQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 226 QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL----VAWSALITG 281
+ ++ GF + ++N + A +F + + ++ V +S +I
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 282 FLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN 341
+ + AL + + + G KAD + +SL+ G ++ ++ + +
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMRNRNI----VSYNSVISGLGLHGLAAQAFKLFE 397
++ SALID+++K G + ++ M R I ++YNS+I G +A ++F+
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 398 EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMA 457
M+ KG +PD T S L+ + C A V DG +FR + + I P T Y +V +
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI-PNTITYNTLVLGFCQS 433
Query: 458 GEL---EEAYNFVLSLMQPVDSGIWGALLS-CCD 487
G+L +E + ++S P +G LL CD
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 160/382 (41%), Gaps = 13/382 (3%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
+ ++I +K EA++ +M++ +P+ TY ++ G + D+D L
Sbjct: 117 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 176
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWG 187
+ K+ HV +A +F + + ++V +++IS G W
Sbjct: 177 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 236
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
QL + M E K P+ T LI + + +H +K D + + ++L
Sbjct: 237 DASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 295
Query: 248 VNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
+N + ++ A +F + PDL ++ LI GF + + + +R +S G
Sbjct: 296 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 355
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
D + +L+ D ++ ++ G+ +I+ S L+D G + +
Sbjct: 356 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 415
Query: 364 VFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
VF+ M+ +I Y ++I G+ G + LF + KG+KP+ T + ++ C
Sbjct: 416 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 475
Query: 420 HAGLVKDGQEIFRRMMDEFCIP 441
L+++ + ++M ++ +P
Sbjct: 476 SKRLLQEAYALLKKMKEDGPLP 497
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 126/277 (45%), Gaps = 9/277 (3%)
Query: 166 FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIG 225
+E +V +++++GY + + L + M E+G +PD T LI GL +
Sbjct: 75 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEA 133
Query: 226 QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITG 281
+ ++ G N +VN + ++ A+ + + + D+V ++ +I
Sbjct: 134 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 193
Query: 282 FLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN 341
+ AL ++ + G + + + +SL+ +++ ++ + N
Sbjct: 194 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 253
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFE 397
++ +ALID ++K G + ++M R +I +YNS+I+G +H +A ++FE
Sbjct: 254 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 313
Query: 398 EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
M+ K PD T + L+ C + V+DG E+FR M
Sbjct: 314 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 350
>AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11394744-11395973 REVERSE
Length = 409
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 109/201 (54%), Gaps = 7/201 (3%)
Query: 216 LMDFSLLGIGQGIHGLCLKSGF--DCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLV 273
+ DF L G+ +H LC K GF + ++Y+ +L+ Y F+C+ A V L + V
Sbjct: 206 IRDFEL---GKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTV 262
Query: 274 AWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTD-VRLGTEIHGY 332
AW+A +T + ++++ + + + G K + + +++L A + ++D R G ++H
Sbjct: 263 AWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHAN 322
Query: 333 VLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS-YNSVISGLGLHGLAAQ 391
++ G ES+ ++ LI+MY K G V VF++ ++ VS +N++++ +G+ +
Sbjct: 323 AIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIE 382
Query: 392 AFKLFEEMLEKGLKPDESTLS 412
A KL +M G+K ++ L+
Sbjct: 383 AIKLLYQMKATGIKAHDTLLN 403
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 30/240 (12%)
Query: 263 VFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKA----DPILIASLLVASA 318
+F + D +W+ + G ++ DY+ A F + ++ +K ++ +L A A
Sbjct: 145 MFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACA 204
Query: 319 QLTDVRLGTEIHGYVLRHGL--ESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSY 376
+ D LG ++H + G E + +S +LI Y + + LV + N N V++
Sbjct: 205 MIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAW 264
Query: 377 NSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCAC------------CHAGLV 424
+ ++ G + + F EM G+K + S S +L AC HA +
Sbjct: 265 AAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAI 324
Query: 425 KDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLS 484
K G E + I R ++++ G G++++A S W A+++
Sbjct: 325 KLGFE------SDCLIRCR------LIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVA 372
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/508 (19%), Positives = 203/508 (39%), Gaps = 98/508 (19%)
Query: 57 AYNLFDKTPQRS----IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTY-ACLI 111
A+ L + P + ++ +N++I K K++ A +A+MLR+ PD+ TY + L+
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 112 RGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLV 171
C K V E KVFS + RD+V
Sbjct: 349 EAC------------------------------------KKGDVVETEKVFSDMRSRDVV 372
Query: 172 ---LC-NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQG 227
+C ++M+S ++ G K L FN ++E G PD LI G ++ +
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG-LIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCED 287
+ L+ G + + +++ + K + A +F E
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF--------------------NEM 471
Query: 288 YKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSA 347
++ALF D + L+ +L +++ E+ + + +++ +
Sbjct: 472 TERALF-----------PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 348 LIDMYLKCGFVGLGILVFENMRNRNI----VSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
L+D + K G + ++ +M ++ I +SY+ +++ L G A+AF++++EM+ K
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI---------HIVKLL 454
+KP + ++ C +G DG+ +M+ E +P + ++ K
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 455 GMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDN--EPRKGAY 512
G+ ++EE ++ D + ++L + AE+V +++ + P + Y
Sbjct: 641 GLVKKMEEEQGGLVP-----DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 513 KVMLSNIYASDGRWDDVKRTRDNIVNVG 540
M+ N + S + R D ++ G
Sbjct: 696 TCMI-NGFVSQDNLTEAFRIHDEMLQRG 722
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 36/273 (13%)
Query: 169 DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGI 228
D+V N +IS YS G + +L N M G P +T +I+GL + +
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 229 HGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQ 284
L+SG ++ +L+ + + VF + PDLV +S++++ F +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 285 CEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIV 344
+ KAL ++ ++ AG D ++ L I GY R G+ S
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTIL---------------IQGYC-RKGMIS---- 427
Query: 345 SSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
+ M L+ + G + ++V+YN+++ GL + +A KLF EM E+ L
Sbjct: 428 ----VAMNLRNEMLQQGCAM-------DVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDE 437
PD TL+ L+ C G +++ E+F++M ++
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 333 VLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRN----IVSYNSVISGLGLHGL 388
V G+ +I+ + LI Y G + + M + + +YN+VI+GL HG
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 389 AAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYI 448
+A ++F EML GL PD +T LL C G V + +++F M +P +
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV-CFS 379
Query: 449 HIVKLLGMAGELEEA 463
++ L +G L++A
Sbjct: 380 SMMSLFTRSGNLDKA 394
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 167/409 (40%), Gaps = 53/409 (12%)
Query: 53 DLISAYNLFDKTPQRSIF----LWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYA 108
D+ +A LF++ R + +NSMI F K + D+ + F+ +M +PD TY
Sbjct: 145 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 204
Query: 109 CLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI--- 165
LI + KF + + + +
Sbjct: 205 ALI-----------------------------------NCFCKFGKLPIGLEFYREMKGN 229
Query: 166 -FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGI 224
+ ++V + ++ + G + ++ + MR +G P+ +T LI L
Sbjct: 230 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG-LVPNEYTYTSLIDANCKIGNLSD 288
Query: 225 GQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALIT 280
+ L+ G + N +AL++ + M A +F + P+L +++ALI
Sbjct: 289 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 348
Query: 281 GFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLES 340
GF++ ++ +AL L G K D +L + + L + + + G+++
Sbjct: 349 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 408
Query: 341 NIIVSSALIDMYLKCGFVGLGILVFENMRNRNI----VSYNSVISGLGLHGLAAQAFKLF 396
N ++ + L+D Y K G G+ + + M+ +I V++ +I GL + L ++A F
Sbjct: 409 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 468
Query: 397 EEMLEK-GLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRT 444
+ GL+ + + + ++ C V+ +F +M+ + +P RT
Sbjct: 469 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 517
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 146/357 (40%), Gaps = 20/357 (5%)
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
++ +++++ AF K +A+ FY M R P+ +TY LI + +L L
Sbjct: 234 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 293
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVF-----SGIFERDLVLCNAMISGYSY 182
+ EA ++F +G+ +L NA+I G+
Sbjct: 294 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP-NLASYNALIHGFVK 352
Query: 183 CGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY 242
+ L+L N ++ G + PD I GL + + + + G N+
Sbjct: 353 AKNMDRALELLNELKGRGIK-PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 411
Query: 243 VGSALVNMYSRFKCMNSAYGVFIGLYQPDL------VAWSALITGFLQCEDYKKALFFYR 296
+ + L++ Y FK N G+ + +L V + LI G + + KA+ ++
Sbjct: 412 IYTTLMDAY--FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 469
Query: 297 NLSVA-GKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKC 355
+S G +A+ + +++ + V T + +++ GL + ++L+D K
Sbjct: 470 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 529
Query: 356 GFVGLGILVFENMRN----RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDE 408
G V + + + M ++++Y S++ GL +A EEM+ +G+ PDE
Sbjct: 530 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 586
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 162/394 (41%), Gaps = 18/394 (4%)
Query: 39 FYATKILRFYALNDDLISAYNLFDKTPQR----SIFLWNSMIRAFAKAHKFDEALSFYAK 94
F IL + A L K R ++ +N+++ + D A ++
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 95 MLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSH 154
+L KP+N+TY+ LI GC N D + K
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 155 VSEASKVFSGIFE--RDLVLC---NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTL 209
S+A ++ + + E R V C N++I G+ G + + M G P+ T
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS-PNVITY 622
Query: 210 VGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ 269
L++GL + + + G + AL++ + + M SA +F L +
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLE 682
Query: 270 ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRL 325
P +++LI+GF + AL Y+ + G + D +L+ + ++ L
Sbjct: 683 EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLIL 742
Query: 326 GTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVS----YNSVIS 381
+E++ + GL + I+ + +++ K G + +FE M+ N+ YN+VI+
Sbjct: 743 ASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIA 802
Query: 382 GLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL 415
G G +AF+L +EML+KG+ PD +T L+
Sbjct: 803 GHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 167/437 (38%), Gaps = 93/437 (21%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT----PQRSIFLWNSMIRAF 79
+L +L +S AT ++ + N+DL+SA LFDK P + ++ +I F
Sbjct: 325 RLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWF 384
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXX 139
K + ++AL FY KM P F +I+G
Sbjct: 385 RKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG-------------------------- 418
Query: 140 XXXXXXXTAYSKFSHVSEASKVFSGIFERDLV---LCNAMISGYSYCGFWGKGLQLFNGM 196
+ K EA K+F FE L +CN ++S G + +L + M
Sbjct: 419 ---------WLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 197 REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKC 256
GIG + N +G + R K
Sbjct: 470 ES-----------------------RGIGPNVVSYN-------NVMLG------HCRQKN 493
Query: 257 MNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIAS 312
M+ A VF + + P+ +S LI G + D + AL +++ + + + ++ +
Sbjct: 494 MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT 553
Query: 313 LLVASAQLTDVRLGTEIHGYVLRHGLESNIIVS----SALIDMYLKCGFVGLGILVFENM 368
++ ++ E+ ++ E + VS +++ID + K G + + +E M
Sbjct: 554 IINGLCKVGQTSKARELLANMIE---EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 369 ----RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV 424
+ N+++Y S+++GL + QA ++ +EM KG+K D L+ C +
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 425 KDGQEIFRRMMDEFCIP 441
+ +F +++E P
Sbjct: 671 ESASALFSELLEEGLNP 687
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 166/421 (39%), Gaps = 21/421 (4%)
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
P S F N +I+A +AH+ A+ M PD T+ +++G E DLDG
Sbjct: 187 PDVSTF--NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI-----FERDLVLCNAMISG 179
+ + K V +A + F D N +++G
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 180 YSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDC 239
G +++ + M + G PD +T +ISGL L + + + L DC
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEG-YDPDVYTYNSVISGLC--KLGEVKEAVEVLDQMITRDC 361
Query: 240 --NAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALF 293
N + L++ + + A + L PD+ +++LI G +++ A+
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 294 FYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYL 353
+ + G + D L+ + + + + G ++I + LID +
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 354 KCGFVGLGILVFENMR----NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDES 409
K +F+ M +RN V+YN++I GL A +L ++M+ +G KPD+
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 410 TLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLS 469
T + LL C G +K +I + M C P Y ++ L AG +E A + S
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGC-EPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 470 L 470
+
Sbjct: 601 I 601
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 165/425 (38%), Gaps = 65/425 (15%)
Query: 69 IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLRILH 127
++ +NS+I K + EA+ +M+ + P+ TY LI C EN
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN---------- 379
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFS--GIFERDLVLCNAMISGYSYCGF 185
+ +E ++V + GI D+ N++I G
Sbjct: 380 -----------------------QVEEATELARVLTSKGILP-DVCTFNSLIQGLCLTRN 415
Query: 186 WGKGLQLFNGMREIGKQQPDGFTLVGLISGL-----MDFSLLGIGQGIHGLCLKSGFDCN 240
++LF MR G +PD FT LI L +D +L + Q C +S N
Sbjct: 416 HRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 241 AYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGFLQCEDYKKALFFYR 296
L++ + + A +F + + V ++ LI G + + A
Sbjct: 475 T-----LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG 356
+ + G+K D SLL + D++ +I + +G E +I+ LI K G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 357 FVGLGILVFENMRNRNIV----SYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDES--- 409
V + + +++ + I +YN VI GL +A LF EMLE+ P ++
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Query: 410 --TLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFV 467
GL C G +++ + ++++ +P + Y+ LL ++ E E V
Sbjct: 650 RIVFRGL---CNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSME-ETLVKLV 705
Query: 468 LSLMQ 472
+MQ
Sbjct: 706 NMVMQ 710
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 209/527 (39%), Gaps = 83/527 (15%)
Query: 6 SSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLIS-------AY 58
SS+ + KS+ S + +++ HL+ + +L + A+ D I A
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIV---HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190
Query: 59 NLFDKTPQR----SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG- 113
N+F + + ++F +N +IR F A D AL+ + KM P+ TY LI G
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 114 CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----D 169
C DG ++L + + E S V + + R D
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVI-NGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 170 LVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLI-----SGLMDFSLLGI 224
V N +I GY G + + L + M G P T LI +G M+ ++ +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHG-LTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 225 GQ-GIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALI 279
Q + GLC N + LV+ +S+ MN AY V + + P +V ++ALI
Sbjct: 369 DQMRVRGLC------PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 280 TGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLE 339
G C V GK D I A L D++ GL
Sbjct: 423 NG--HC--------------VTGKMEDAI---------AVLEDMK----------EKGLS 447
Query: 340 SNIIVSSALIDMYLKCGFVGLGILVFENMRNRNI----VSYNSVISGLGLHGLAAQAFKL 395
+++ S ++ + + V + V M + I ++Y+S+I G +A L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 396 FEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLG 455
+EEML GL PDE T + L+ A C G ++ ++ M+++ +P + + ++ L
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV-LINGLN 566
Query: 456 MAGELEEAYNFVLSLM--QPVDSGI-WGALLSCCDVHGNTELAEIVS 499
EA +L L + V S + + L+ C N E +VS
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC---SNIEFKSVVS 610
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 151/414 (36%), Gaps = 92/414 (22%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
+N++I+ + K F +AL +A+MLR P TY LI + +++
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI----FERDLVLCNAMISGYSYCGFWG 187
+S+ +++EA +V + F +V NA+I+G+ G
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAY-VGSA 246
+ + M+E G PD + ++SG C +Y V A
Sbjct: 433 DAIAVLEDMKEKG-LSPDVVSYSTVLSGF----------------------CRSYDVDEA 469
Query: 247 LVNMYSRFKCMNSAYGVFIGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKAD 306
L R K G+ +PD + +S+LI GF + K+A Y + G D
Sbjct: 470 L-----RVKREMVEKGI-----KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 307 PILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALID---------------- 350
+L+ A D+ ++H ++ G+ +++ S LI+
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 351 -----------------------------MYLKCGFVGLGIL-----VFENMRNRNI--- 373
+ L GF G++ VFE+M +N
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 374 -VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKD 426
+YN +I G G +A+ L++EM++ G T+ L+ A G V +
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 9/278 (3%)
Query: 166 FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIG 225
+ D++ + +++GY G K +L M+ G +P+ + +I L L
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG-LKPNSYIYGSIIGLLCRICKLAEA 778
Query: 226 QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITG 281
+ ++ G + V + L++ + + + +A F ++ PD++ ++A+I+G
Sbjct: 779 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 838
Query: 282 FLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN 341
F Q D +A + + G + D + L+ + ++ +H ++++ G N
Sbjct: 839 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMR----NRNIVSYNSVISGLGLHGLAAQAFKLFE 397
++ + LID K G + + M NI +YNS+++GL G +A KL
Sbjct: 899 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 398 EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM 435
E GL D T + L+ A C +G + QEI + M+
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 996
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGT 327
Y PD++++S ++ G+ + + K + G K + + S++ ++ +
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779
Query: 328 EIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNI----VSYNSVISGL 383
E ++R G+ + +V + LID + K G + F M +R+I ++Y ++ISG
Sbjct: 780 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
G +A KLF EM KGL+PD T + L+ C AG +KD + M+ C P
Sbjct: 840 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC-SPN 898
Query: 444 TEHYIHIVKLLGMAGELEEA 463
Y ++ L G+L+ A
Sbjct: 899 VVTYTTLIDGLCKEGDLDSA 918
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 178/434 (41%), Gaps = 57/434 (13%)
Query: 21 RTKQLHALILRSHL---SHESFYATKILRFYALNDDLISAYNLFDKTPQRSI----FLWN 73
R K+ H L+L L + + + ++ Y +L + L + ++ + +++
Sbjct: 704 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 763
Query: 74 SMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXX 133
S+I + K EA +++M+R PD Y LI G
Sbjct: 764 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG-------------------- 803
Query: 134 XXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL----VLCNAMISGYSYCGFWGKG 189
+ K + ASK F + RD+ + A+ISG+ G +
Sbjct: 804 ---------------FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 848
Query: 190 LQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVN 249
+LF+ M G +PD T LI+G + +H +++G N + L++
Sbjct: 849 GKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 907
Query: 250 MYSRFKCMNSAYGVF-----IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
+ ++SA + IGL QP++ +++++ G + + ++A+ AG
Sbjct: 908 GLCKEGDLDSANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 966
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILV 364
AD + +L+ A + ++ EI +L GL+ I+ + L++ + G + G +
Sbjct: 967 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1026
Query: 365 FENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCH 420
M + N ++NS++ + A ++++M +G+ PD T L+ C
Sbjct: 1027 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 1086
Query: 421 AGLVKDGQEIFRRM 434
A +K+ +F+ M
Sbjct: 1087 ARNMKEAWFLFQEM 1100
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 120/317 (37%), Gaps = 22/317 (6%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
+V +++L+ K R+ +K + + R ++ + T I+ + D++ A LF
Sbjct: 794 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVEAGKLF 852
Query: 62 DK------TPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCH 115
+ P F +I + KA +A + M++ P+ TY LI G
Sbjct: 853 HEMFCKGLEPDSVTF--TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 910
Query: 116 ENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE-----RDL 170
+ DLD L K ++ EA K+ G FE D
Sbjct: 911 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV-GEFEAAGLNADT 969
Query: 171 VLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ-QPDGFTLVGLISGLMDFSLLGIGQGIH 229
V ++ Y G K ++ M +GK QP T L++G +L G+ +
Sbjct: 970 VTYTTLMDAYCKSGEMDKAQEILKEM--LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Query: 230 GLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQC 285
L G NA ++LV Y + +A ++ + PD + L+ G +
Sbjct: 1028 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 1087
Query: 286 EDYKKALFFYRNLSVAG 302
+ K+A F ++ + G
Sbjct: 1088 RNMKEAWFLFQEMKGKG 1104
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 9/278 (3%)
Query: 166 FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIG 225
+ D++ + +++GY G K +L M+ G +P+ + +I L L
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG-LKPNSYIYGSIIGLLCRICKLAEA 778
Query: 226 QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITG 281
+ ++ G + V + L++ + + + +A F ++ PD++ ++A+I+G
Sbjct: 779 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 838
Query: 282 FLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN 341
F Q D +A + + G + D + L+ + ++ +H ++++ G N
Sbjct: 839 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMR----NRNIVSYNSVISGLGLHGLAAQAFKLFE 397
++ + LID K G + + M NI +YNS+++GL G +A KL
Sbjct: 899 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 398 EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMM 435
E GL D T + L+ A C +G + QEI + M+
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 996
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGT 327
Y PD++++S ++ G+ + + K + G K + + S++ ++ +
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779
Query: 328 EIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNI----VSYNSVISGL 383
E ++R G+ + +V + LID + K G + F M +R+I ++Y ++ISG
Sbjct: 780 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
G +A KLF EM KGL+PD T + L+ C AG +KD + M+ C P
Sbjct: 840 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC-SPN 898
Query: 444 TEHYIHIVKLLGMAGELEEA 463
Y ++ L G+L+ A
Sbjct: 899 VVTYTTLIDGLCKEGDLDSA 918
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 178/434 (41%), Gaps = 57/434 (13%)
Query: 21 RTKQLHALILRSHL---SHESFYATKILRFYALNDDLISAYNLFDKTPQRSI----FLWN 73
R K+ H L+L L + + + ++ Y +L + L + ++ + +++
Sbjct: 704 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 763
Query: 74 SMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXX 133
S+I + K EA +++M+R PD Y LI G
Sbjct: 764 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG-------------------- 803
Query: 134 XXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL----VLCNAMISGYSYCGFWGKG 189
+ K + ASK F + RD+ + A+ISG+ G +
Sbjct: 804 ---------------FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 848
Query: 190 LQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVN 249
+LF+ M G +PD T LI+G + +H +++G N + L++
Sbjct: 849 GKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 907
Query: 250 MYSRFKCMNSAYGVF-----IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK 304
+ ++SA + IGL QP++ +++++ G + + ++A+ AG
Sbjct: 908 GLCKEGDLDSANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 966
Query: 305 ADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILV 364
AD + +L+ A + ++ EI +L GL+ I+ + L++ + G + G +
Sbjct: 967 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1026
Query: 365 FENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCH 420
M + N ++NS++ + A ++++M +G+ PD T L+ C
Sbjct: 1027 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 1086
Query: 421 AGLVKDGQEIFRRM 434
A +K+ +F+ M
Sbjct: 1087 ARNMKEAWFLFQEM 1100
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 120/317 (37%), Gaps = 22/317 (6%)
Query: 2 SVKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLF 61
+V +++L+ K R+ +K + + R ++ + T I+ + D++ A LF
Sbjct: 794 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVEAGKLF 852
Query: 62 DK------TPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCH 115
+ P F +I + KA +A + M++ P+ TY LI G
Sbjct: 853 HEMFCKGLEPDSVTF--TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 910
Query: 116 ENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE-----RDL 170
+ DLD L K ++ EA K+ G FE D
Sbjct: 911 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV-GEFEAAGLNADT 969
Query: 171 VLCNAMISGYSYCGFWGKGLQLFNGMREIGKQ-QPDGFTLVGLISGLMDFSLLGIGQGIH 229
V ++ Y G K ++ M +GK QP T L++G +L G+ +
Sbjct: 970 VTYTTLMDAYCKSGEMDKAQEILKEM--LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Query: 230 GLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQC 285
L G NA ++LV Y + +A ++ + PD + L+ G +
Sbjct: 1028 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 1087
Query: 286 EDYKKALFFYRNLSVAG 302
+ K+A F ++ + G
Sbjct: 1088 RNMKEAWFLFQEMKGKG 1104
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 161/391 (41%), Gaps = 19/391 (4%)
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFD----L 120
P + F N++I+ K EA+ +M+ +PD TY ++ G + D L
Sbjct: 146 PDTTTF--NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 203
Query: 121 DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGY 180
D LR + + +S ++ + + +V N+++ G
Sbjct: 204 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 263
Query: 181 SYCGFWGKGLQLFNGM--REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFD 238
G W G L M REI P+ T L+ + L ++ + G
Sbjct: 264 CKAGKWNDGALLLKDMVSREI---VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 320
Query: 239 CNAYVGSALVN---MYSRFKCMNSAYGVFI-GLYQPDLVAWSALITGFLQCEDYKKALFF 294
N + L++ M +R N+ + + PD+V +++LI G+ + +
Sbjct: 321 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 380
Query: 295 YRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLK 354
+RN+S G A+ + + L+ Q ++L E+ ++ HG+ +++ L+D
Sbjct: 381 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 440
Query: 355 CGFVGLGILVFENMRNRN----IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDEST 410
G + + +FE+++ IV Y ++I G+ G A+ LF + KG+KP+ T
Sbjct: 441 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 500
Query: 411 LSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
+ ++ C G + + + R+M ++ P
Sbjct: 501 YTVMISGLCKKGSLSEANILLRKMEEDGNAP 531
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 139/328 (42%), Gaps = 11/328 (3%)
Query: 160 KVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDF 219
KV +E D N +I G G + + L + M E G QPD T +++G+
Sbjct: 138 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG-CQPDVVTYNSIVNGICRS 196
Query: 220 SLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAW 275
+ + + + + S +++ R C+++A +F + + +V +
Sbjct: 197 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 256
Query: 276 SALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLR 335
++L+ G + + +++ + I LL + ++ E++ ++
Sbjct: 257 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 316
Query: 336 HGLESNIIVSSALIDMYLKCGFV----GLGILVFENMRNRNIVSYNSVISGLGLHGLAAQ 391
G+ NII + L+D Y + + L+ N + +IV++ S+I G +
Sbjct: 317 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 376
Query: 392 AFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIV 451
K+F + ++GL + T S L+ C +G +K +E+F+ M+ +P + I +
Sbjct: 377 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 436
Query: 452 KLLGMAGELEEAYNFVLSLMQ-PVDSGI 478
L G+LE+A L + +D GI
Sbjct: 437 GLCD-NGKLEKALEIFEDLQKSKMDLGI 463
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 141/372 (37%), Gaps = 19/372 (5%)
Query: 57 AYNLFDKTPQRSI----FLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIR 112
A +L K +R++ F ++++I + + D A+S + +M K TY L+R
Sbjct: 202 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 261
Query: 113 G-CHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER--- 168
G C DG +L + K + EA++++ + R
Sbjct: 262 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL-DVFVKEGKLQEANELYKEMITRGIS 320
Query: 169 -DLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQG 227
+++ N ++ GY + + + M K PD T LI G + G
Sbjct: 321 PNIITYNTLMDGYCMQNRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMK 379
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFL 283
+ K G NA S LV + + + A +F + PD++ + L+ G
Sbjct: 380 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 439
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
+KAL + +L + ++ +++ + V + + G++ N++
Sbjct: 440 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 499
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEM 399
+ +I K G + ++ M N +YN++I G + KL EEM
Sbjct: 500 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 559
Query: 400 LEKGLKPDESTL 411
G D S++
Sbjct: 560 KSCGFSADASSI 571
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 97/237 (40%), Gaps = 44/237 (18%)
Query: 235 SGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGFLQCEDYKK 290
+G N Y + ++N + R AY V + Y+PD ++ LI G
Sbjct: 107 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG--------- 157
Query: 291 ALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALID 350
L + GK ++ +++ +V +G + +++ +++++
Sbjct: 158 -------LFLEGKVSEAVVLVDRMV-------------------ENGCQPDVVTYNSIVN 191
Query: 351 MYLKCGFVGLGILVFENMRNRNI----VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKP 406
+ G L + + M RN+ +Y+++I L G A LF+EM KG+K
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251
Query: 407 DESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEA 463
T + L+ C AG DG + + M+ +P + ++ + G+L+EA
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV-LLDVFVKEGKLQEA 307
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 9/250 (3%)
Query: 190 LQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVN 249
+ LF + +G D ++ LI + L + G +K GF+ + +LVN
Sbjct: 99 ISLFRHLEMLGISH-DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVN 157
Query: 250 MY---SRFKCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKA 305
+ +RF S +GL Y+P++V ++ +I + AL +++ G +
Sbjct: 158 GFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRP 217
Query: 306 DPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVF 365
D + SL+ + I ++R G+ ++I SALID+Y K G + +
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
Query: 366 ENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHA 421
M R NIV+YNS+I+GL +HGL +A K+ ++ KG P+ T + L+ C A
Sbjct: 278 NEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337
Query: 422 GLVKDGQEIF 431
V DG +I
Sbjct: 338 KRVDDGMKIL 347
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 153/387 (39%), Gaps = 15/387 (3%)
Query: 69 IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLRILH 127
++ + ++I F + + ALS KM++ +P T+ L+ G CH N + + ++
Sbjct: 114 LYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVD 173
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI----FERDLVLCNAMISGYSYC 183
+ K V+ A V + D+V N++I+ +
Sbjct: 174 QIVGLGYEPNVVIYNTIIDSLCEK-GQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 184 GFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYV 243
G WG ++ + M +G PD T LI L + + ++ + N
Sbjct: 233 GTWGVSARILSDMMRMG-ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVT 291
Query: 244 GSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
++L+N ++ A V L + P+ V ++ LI G+ + + + +S
Sbjct: 292 YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMS 351
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
G D +L Q ++ G ++ G+ ++ + L+D G +G
Sbjct: 352 RDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIG 411
Query: 360 LGILVFENMRNRN----IVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL 415
++ E+++ I++YN +I GL A+ LF + KG+ PD T ++
Sbjct: 412 KALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
Query: 416 CACCHAGLVKDGQEIFRRMMDEFCIPP 442
L ++ E++R+M E + P
Sbjct: 472 IGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 31/278 (11%)
Query: 270 PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEI 329
P +V +S L+ + Y+ + +R+L + G D +L+ + + L
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 330 HGYVLRHGLESNIIVSSALID-----------MYLKCGFVGLGILVFENMRNRNIVSYNS 378
G +++ G E +I+ +L++ M L VGLG N+V YN+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY-------EPNVVIYNT 189
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEF 438
+I L G A + + M + G++PD T + L+ H+G I MM
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM-RM 248
Query: 439 CIPPRTEHYIHIVKLLGMAGELEEA---YNFVLSLMQPVDSGIWGALLSCCDVHGNTELA 495
I P + ++ + G G+L EA YN ++ + + +L++ +HG + A
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 496 E-----IVSQQLFDNEPRKGAYKVMLSNIYASDGRWDD 528
+ +VS+ F P Y ++ N Y R DD
Sbjct: 309 KKVLNVLVSKGFF---PNAVTYNTLI-NGYCKAKRVDD 342
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 175/424 (41%), Gaps = 66/424 (15%)
Query: 24 QLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKTP----QRSIFLWNSMIRAF 79
Q + I+ + L + F T ++ Y DL SA+ +F++ P +R+ + +I
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 80 AKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLRILHXXXXXXXXXXX 138
A + DEA+ + KM E P TY LI+ C + L ++
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 139 XXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWGKGLQLFN 194
+ S+ +A ++ + E+ +++ NA+I+GY G + +
Sbjct: 359 HTYTVLIDSLCSQ-CKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 195 GMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRF 254
M E K P+ T LI G C + V A+
Sbjct: 418 LM-ESRKLSPNTRTYNELIKGY----------------------CKSNVHKAM------- 447
Query: 255 KCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKK---ADP 307
GV + + PD+V +++LI G + ++ A YR LS+ + D
Sbjct: 448 -------GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA---YRLLSLMNDRGLVPDQ 497
Query: 308 ILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFEN 367
S++ + + V ++ + + G+ N+++ +ALID Y K G V L+ E
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 368 MRNRNI----VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGL 423
M ++N +++N++I GL G +A L E+M++ GL+P ST + L+ L
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI-----HRL 612
Query: 424 VKDG 427
+KDG
Sbjct: 613 LKDG 616
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 9/249 (3%)
Query: 212 LISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ-- 269
L++ L F L+ + ++ L+ N Y + +VN Y + + A + +
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 270 --PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPI----LIASLLVASAQLTDV 323
PD +++LI G+ Q +D A + + + G + + + LI L VA +
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGL 383
L ++ + + ++ +L K + L + E NI +Y +I L
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
+A +L +MLEKGL P+ T + L+ C G+++D ++ +M+ + P
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV-ELMESRKLSPN 427
Query: 444 TEHYIHIVK 452
T Y ++K
Sbjct: 428 TRTYNELIK 436
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 162/448 (36%), Gaps = 66/448 (14%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
+N +I+ + K++ +A+ KML + PD TY LI G + + D L
Sbjct: 431 YNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWG 187
+ K V EA +F + ++ ++V+ A+I GY G
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 188 KGLQLFNGMREIGKQ-QPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSA 246
+ + M + K P+ T LI GL L + +K G +
Sbjct: 550 EAHLMLEKM--LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 247 LVN----------MYSRFKCMNSA--------YGVFIGLY-------------------- 268
L++ YSRF+ M S+ Y FI Y
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 269 -QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGT 327
PDL +S+LI G+ A + + G + SL+ L +++ G
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI---KHLLEMKYGK 724
Query: 328 EIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHG 387
+ G E + S +++ V L + E+ N SY +I G+ G
Sbjct: 725 Q-------KGSEPELCAMSNMMEFD---TVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Query: 388 LAAQAFKLFEEMLE-KGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP--PRT 444
A K+F+ M +G+ P E + LL CC +K E + + D C+ P+
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK---LKKHNEAAKVVDDMICVGHLPQL 831
Query: 445 EHYIHIVKLLGMAGELEEAYNFVLSLMQ 472
E ++ L GE E + +L+Q
Sbjct: 832 ESCKVLICGLYKKGEKERGTSVFQNLLQ 859
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/505 (20%), Positives = 201/505 (39%), Gaps = 30/505 (5%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSH---ESFYATKILRFYALNDDLISAYNLF 61
F+ LL+ L K + K L +I R L + + + + + L+ + L
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 62 DKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENFDL 120
++ P+ + +N++I K KF EA + KM+ +PD++TY LI G C
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM-- 336
Query: 121 DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFS--------GIFERDLVL 172
+++ + H E ++ + GI + +++L
Sbjct: 337 --VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVIL 393
Query: 173 CNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLC 232
N +I G S G + QL N M E G P+ T L++GL + G+ +
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 233 LKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGFLQCEDY 288
+ G+ + + + L++ YS M +A + + PD+ +++L+ G + +
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
+ + Y+ + G + LL + + + + + + + + L
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 349 IDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQ-----AFKLFEEMLEKG 403
ID + K G + +F M VS ++ + +H + A KLF+EM+++
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEA 463
L PD T ++ C G V G + MM+ IP T ++ L + + EA
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT-LGRVINCLCVEDRVYEA 691
Query: 464 YNFVLSLMQPVDSGIWGALLSCCDV 488
+ ++Q + A+ + CDV
Sbjct: 692 AGIIHRMVQ--KGLVPEAVNTICDV 714
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/450 (19%), Positives = 164/450 (36%), Gaps = 56/450 (12%)
Query: 45 LRFYALNDDLISAYNLFDKTP----QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTET 100
++ Y + A N+F++ + ++F +N+++ + FD+A Y +M
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 101 KPDNFTYACLIR---------------------GCH---------------ENFDLDGLR 124
PD +++ ++ GC ENF +G
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGY 180
L K V E K+ + +R +L N I G
Sbjct: 203 -LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 181 SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCN 240
G +++ + E G +PD T LI GL S + G + G + +
Sbjct: 262 CQRGELDGAVRMVGCLIEQG-PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 241 AYVGSALVNMYSRFKCMNSAY-----GVFIGLYQPDLVAWSALITGFLQCEDYKKALFFY 295
+Y + L+ Y + + A VF G + PD + +LI G + +AL +
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNG-FVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 296 RNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKC 355
G K + IL +L+ + + ++ + GL + + L++ K
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 356 GFV----GLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTL 411
G V GL ++ +I ++N +I G A ++ + ML+ G+ PD T
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 412 SGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
+ LL C +D E ++ M+++ C P
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 145/339 (42%), Gaps = 16/339 (4%)
Query: 147 TAYSKFSHVSEASKVFSGIFE----RDLVLCNAMISGYSYCGF-WGKGLQLFNGMREIGK 201
+A++ EA VF + E L+ N +++ + G W K L M+ G
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG- 274
Query: 202 QQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAY 261
PD +T LI+ SL + +GF + +AL+++Y + A
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334
Query: 262 GVF----IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVAS 317
V + + P +V +++LI+ + + +A+ ++ G K D +LL
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 318 AQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMR----NRNI 373
+ V I + G + NI +A I MY G + +F+ + + +I
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 374 VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRR 433
V++N++++ G +G+ ++ +F+EM G P+ T + L+ A G + ++RR
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRR 514
Query: 434 MMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQ 472
M+D + P Y ++ L G E++ VL+ M+
Sbjct: 515 MLDA-GVTPDLSTYNTVLAALARGGMWEQSEK-VLAEME 551
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 159/405 (39%), Gaps = 57/405 (14%)
Query: 42 TKILRFYALNDDLISAYNLFDKTPQ----RSIFLWNSMIRAFAK-AHKFDEALSFYAKML 96
T ++ +A + A N+F K + ++ +N ++ F K +++ S KM
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 97 RTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVS 156
PD +TY LI C + Y K
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 157 EASKVFSGI----FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGL 212
EA KV + + F +V N++IS Y+ G + ++L N M E G +PD FT L
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTTL 390
Query: 213 ISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQPDL 272
+ SGF+ V SA+ S F+ M +A G +P++
Sbjct: 391 L---------------------SGFERAGKVESAM----SIFEEMRNA-GC-----KPNI 419
Query: 273 VAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGY 332
++A I + + + + + ++V G D + +LL Q + +E+ G
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG---MDSEVSGV 476
Query: 333 ---VLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIV----SYNSVISGLGL 385
+ R G + LI Y +CG + V+ M + + +YN+V++ L
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 386 HGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEI 430
G+ Q+ K+ EM + KP+E T C+ HA +G+EI
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELT----YCSLLHA--YANGKEI 575
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/455 (19%), Positives = 178/455 (39%), Gaps = 18/455 (3%)
Query: 3 VKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFD 62
V +++LL KSH+ + K L+ ++L S ++ YA + L A L +
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKN 373
Query: 63 KTPQR----SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENF 118
+ ++ +F + +++ F +A K + A+S + +M KP+ T+ I+
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 119 DLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGI----FERDLVLCN 174
+ + + + SE S VF + F + N
Sbjct: 434 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 175 AMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLK 234
+IS YS CG + + + ++ M + G PD T +++ L + + +
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAG-VTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 235 SGFDCNAYVGSALVNMYSRFK---CMNS-AYGVFIGLYQPDLVAWSALITGFLQCEDYKK 290
N +L++ Y+ K M+S A V+ G+ +P V L+ +C+ +
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 291 ALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALID 350
A + L G D + S++ + V + Y+ G ++ ++L+
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 351 MYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKP 406
M+ + G + + + +I+SYN+VI + A ++F EM G+ P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 407 DESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
D T + + + + ++ + R M+ C P
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 767
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 10/238 (4%)
Query: 234 KSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQC-EDY 288
+ GF + Y ++L++ ++ A VF + + P L+ ++ ++ F + +
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 289 KKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSAL 348
K + G D +L+ + + + ++ + G + + +AL
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 349 IDMYLKCGFVGLGILVFENMR----NRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
+D+Y K + V M + +IV+YNS+IS G+ +A +L +M EKG
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEE 462
KPD T + LL AG V+ IF M + C P + +K+ G G+ E
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC-KPNICTFNAFIKMYGNRGKFTE 437
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 138/320 (43%), Gaps = 18/320 (5%)
Query: 156 SEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISG 215
S K+ +E D V+ N +++G + L+L + M E+G +P TL L++G
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG-HKPTLITLNTLVNG 202
Query: 216 LMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP----- 270
L + + +++GF N ++N+ C + + + L +
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM----CKSGQTALAMELLRKMEERN 258
Query: 271 ---DLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGT 327
D V +S +I G + A + + + G KAD I +L+ G
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 328 EIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGL 383
++ +++ + N++ S LID ++K G + + + M R N ++YNS+I G
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 384 GLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPR 443
+A ++ + M+ KG PD T + L+ C A + DG E+FR M I
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI-AN 437
Query: 444 TEHYIHIVKLLGMAGELEEA 463
T Y +V+ +G+LE A
Sbjct: 438 TVTYNTLVQGFCQSGKLEVA 457
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 161/418 (38%), Gaps = 51/418 (12%)
Query: 65 PQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLR 124
P IF N+++ + EAL +M+ KP T L+ G N +
Sbjct: 156 PDTVIF--NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 125 ILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGY 180
+L K + A ++ + ER D V + +I G
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 181 SYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCN 240
G LFN M EI + D T LI G + G + +K N
Sbjct: 274 CKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 241 AYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYR 296
S L++ + + + A + + Q P+ + +++LI GF C++ +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF--CKENR------- 383
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG 356
L + Q+ D+ ++ G + +I+ + LI+ Y K
Sbjct: 384 -----------------LEEAIQMVDL---------MISKGCDPDIMTFNILINGYCKAN 417
Query: 357 FVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
+ G+ +F M R N V+YN+++ G G A KLF+EM+ + ++PD +
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSL 470
LL C G ++ EIF + +++ + Y+ I+ + A ++++A++ SL
Sbjct: 478 ILLDGLCDNGELEKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 120/298 (40%), Gaps = 9/298 (3%)
Query: 166 FERDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIG 225
F+ D++ N +I G+ G W G +L M + K P+ T LI + L
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK-RKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 226 QGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLY----QPDLVAWSALITG 281
+ ++ G N ++L++ + + + A + + PD++ ++ LI G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 282 FLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESN 341
+ + L +R +S+ G A+ + +L+ Q + + ++ ++ + +
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 342 IIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFE 397
I+ L+D G + + +F + +I Y +I G+ A+ LF
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 398 EMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLG 455
+ KG+K D + ++ C + +FR+M +E P + I I LG
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 189/474 (39%), Gaps = 38/474 (8%)
Query: 60 LFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENF 118
+ D + S++ +NS+I K A F A+M+ + +P TY L+ G C +
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 119 DLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL----VLCN 174
LR+ H + + + +A K+F+ + E ++ V N
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLF-RAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 175 AMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIG-------QG 227
MI GY G K + M E G PD ++ LI GL L G G
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKG-IVPDTYSYRPLIHGL---CLTGQASEAKVFVDG 602
Query: 228 IHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQP----DLVAWSALITGFL 283
+H K + N + L++ + R + A V + Q DLV + LI G L
Sbjct: 603 LH----KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 284 QCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNII 343
+ +D K + + G K D ++ S++ A ++ D + I ++ G N +
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 344 VSSALIDMYLKCGFVGLGILVFENMRN----RNIVSYNSVISGLGLHGLAAQAFKLFEEM 399
+A+I+ K GFV ++ M+ N V+Y + L + Q
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 400 LEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGE 459
+ KGL + +T + L+ C G +++ E+ RM+ + + P Y ++ L +
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG-VSPDCITYTTMINELCRRND 837
Query: 460 LEEAYNFVLSLMQP---VDSGIWGALLSCCDVHGN----TELA-EIVSQQLFDN 505
+++A S+ + D + L+ C V G TEL E++ Q L N
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 176/458 (38%), Gaps = 33/458 (7%)
Query: 73 NSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXXX 132
++++ K F A+ + M+ +PD + Y +IR E DL + +
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 133 XXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDL----VLCNAMISGYSYCGFWGK 188
K V EA + + +DL V ++ G +
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 189 GLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALV 248
GL++ + M + + P + L+ GL + + + G N +V +AL+
Sbjct: 316 GLEMMDEMLCL-RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 249 NMYSRFKCMNSAYGVF-----IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
+ + + + A +F IGL +P+ V +S LI F + AL F + G
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGL-RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
K SL+ + D+ ++ LE ++ ++L+ Y G + +
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 364 VFENMRNRNIV----SYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
++ M + I ++ +++SGL GL A KLF EM E +KP+ T + ++ C
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 420 HAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIW 479
G + E F + M E I P T Y ++ L + G+ EA FV L +
Sbjct: 554 EEGDMSKAFE-FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK------- 605
Query: 480 GALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLS 517
GN EL EI L R+G + LS
Sbjct: 606 ----------GNCELNEICYTGLLHGFCREGKLEEALS 633
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/480 (19%), Positives = 195/480 (40%), Gaps = 21/480 (4%)
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
++F++N++I + K KF EA + +M + +P++ TY+ LI LD
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEA----SKVFSGIFERDLVLCNAMISGYSYC 183
+ KF +S A +++ + E +V +++ GY
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 184 GFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYV 243
G K L+L++ M G P +T L+SGL L+ + + N
Sbjct: 486 GKINKALRLYHEMTGKG-IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544
Query: 244 GSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKALFFYRNLS 299
+ ++ Y M+ A+ + + PD ++ LI G +A F L
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 300 VAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVG 359
+ + I LL + + + +++ G++ +++ LID LK
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 360 LGILVFENMRNRNI----VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLL 415
L + + M +R + V Y S+I G +AF +++ M+ +G P+E T + ++
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 416 CACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPV- 474
C AG V + + + +M +P + + + L ++++A ++++ +
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL 784
Query: 475 -DSGIWGALLSCCDVHGNTELA-EIVSQQLFDN-EPRKGAYKVMLSNIYASDGRWDDVKR 531
++ + L+ G E A E++++ + D P Y M++ + R +DVK+
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC----RRNDVKK 840
>AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14510482-14511891 FORWARD
Length = 469
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%)
Query: 347 ALIDMYLKCGFVGLGILVFENMRNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKP 406
+I+MY C + VF M RN ++ ++I L +G +A +F +E+G KP
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 407 DESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNF 466
D+ + AC G + +G F M ++ + E Y++++++L G L+EA +F
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 467 VLSLMQPVDSGIWGALLSCCDVHGNTELAE 496
V + +W L++ C V G EL +
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELGD 297
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 138/322 (42%), Gaps = 49/322 (15%)
Query: 154 HVSEASKVFSGIFE----RDLVLCNAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTL 209
+ AS++ S + + ++V +I+G+ G + LF M + G +PD
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG-IEPDLIAY 324
Query: 210 VGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLY- 268
LI G +LG+G + L G + V S+ +++Y + + +A V+ +
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 269 ---QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRL 325
P++V ++ LI G C+D + Y
Sbjct: 385 QGISPNVVTYTILIKGL--CQDGR----IYEAFG-------------------------- 412
Query: 326 GTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRN----RNIVSYNSVIS 381
++G +L+ G+E +I+ S+LID + KCG + G ++E+M ++V Y ++
Sbjct: 413 ---MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 382 GLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
GL GL A + +ML + ++ + + L+ C + ++F R+M + I
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGIYGIK 528
Query: 442 PRTEHYIHIVKLLGMAGELEEA 463
P + ++++ M G LEEA
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEA 550
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/437 (19%), Positives = 169/437 (38%), Gaps = 64/437 (14%)
Query: 60 LFDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGC----- 114
+ D P ++ + ++I F K + D A + M + +PD Y+ LI G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 115 ----HENF--------------------------DLDGLRILHXXXXXXXXXXXXXXXXX 144
H+ F DL +++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 145 XXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWGKGLQLFNGMREIG 200
+ + EA ++ I +R +V +++I G+ CG G L+ M ++G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 201 KQQP--------DGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYS 252
DG + GL+ M FS+ +GQ I N V ++L++ +
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR---------LNVVVFNSLIDGWC 507
Query: 253 RFKCMNSAYGVF--IGLY--QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPI 308
R + A VF +G+Y +PD+ ++ ++ + ++ALF + + G + D +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 309 LIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENM 368
+L+ A + +G ++ + R+ + ++I V + +I + KC + F N+
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627
Query: 369 ----RNRNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV 424
+IV+YN++I G +A ++FE + P+ TL+ L+ C +
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 687
Query: 425 KDGQEIFRRMMDEFCIP 441
+F M ++ P
Sbjct: 688 DGAIRMFSIMAEKGSKP 704
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/452 (19%), Positives = 176/452 (38%), Gaps = 24/452 (5%)
Query: 3 VKFSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFD 62
V FSS + KS + + ++ +L +S T +++ + + A+ ++
Sbjct: 357 VVFSSTIDVYVKSGDLATAS-VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 63 KTPQR----SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHEN 117
+ +R SI ++S+I F K + Y M++ PD Y L+ G +
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 118 FDLDGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFS--GIF--ERDLVLC 173
L +R + + + EA KVF GI+ + D+
Sbjct: 476 LMLHAMR-FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 174 NAMISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCL 233
++ G + L LF M ++G +PD LI IG + L
Sbjct: 535 TTVMRVSIMEGRLEEALFLFFRMFKMG-LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 234 KSGFDCNAYVGSALVNMYSRFKC--MNSAYGVFIGL----YQPDLVAWSALITGFLQCED 287
++ + V + ++++ FKC + A F L +PD+V ++ +I G+
Sbjct: 594 RNKISADIAVCNVVIHLL--FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 288 YKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSA 347
+A + L V + + + L+ + D+ + + G + N +
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711
Query: 348 LIDMYLKCGFVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKG 403
L+D + K + +FE M+ + +IVSY+ +I GL G +A +F + ++
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771
Query: 404 LKPDESTLSGLLCACCHAGLVKDGQEIFRRMM 435
L PD + L+ C G + + ++ M+
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEAALLYEHML 803
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 118/235 (50%), Gaps = 16/235 (6%)
Query: 212 LISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGL---- 267
+I+ L S I + G +K G++ + S+L+N + + + A + +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 268 YQPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASL---LVASAQLTDV- 323
++PD+V ++ +I G + A+ + + G +AD + SL L S + +D
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 324 RLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNR----NIVSYNSV 379
RL + V+R + N+I +A+ID+++K G + ++E M R ++ +YNS+
Sbjct: 230 RL---MRDMVMRD-IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 380 ISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRM 434
I+GL +HG +A ++ + M+ KG PD T + L+ C + V +G ++FR M
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 156/389 (40%), Gaps = 24/389 (6%)
Query: 69 IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRG-CHENFDLDGLRILH 127
++ +N +I + +F ALS KM++ +PD T + LI G C N D + ++
Sbjct: 104 LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVS 163
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERD-----LVLCNAMISGYSY 182
+ K V++A ++F + ERD V N++++G
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGS-CKIGLVNDAVELFDRM-ERDGVRADAVTYNSLVAGLCC 221
Query: 183 CGFWGKGLQLFNGM--REIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCN 240
G W +L M R+I P+ T +I + ++ + D +
Sbjct: 222 SGRWSDAARLMRDMVMRDI---VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 241 AYVGSALVN---MYSRFKCMNSAYGVFIGL-YQPDLVAWSALITGFLQCEDYKKALFFYR 296
+ ++L+N M+ R + + PD+V ++ LI GF + + + +R
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 297 NLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCG 356
++ G D I +++ Q EI R NI S L+
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNW 395
Query: 357 FVGLGILVFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLS 412
V +++FENM+ +I +YN VI G+ G A+ LF + KGLKPD + +
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 413 GLLCACCHAGLVKDGQEIFRRMMDEFCIP 441
++ C ++R+M ++ +P
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 12/243 (4%)
Query: 68 SIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILH 127
++ + ++I F K KF EA+ Y +M R PD FTY LI G + +D + +
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 128 XXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYC 183
+ K V E +K+F + +R D + N +I GY
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 184 GFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYV 243
G ++F+ M + L GL L + + + KS + +
Sbjct: 363 GRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ----KSEIELDITT 418
Query: 244 GSALVNMYSRFKCMNSAYGVFIGL----YQPDLVAWSALITGFLQCEDYKKALFFYRNLS 299
+ +++ + + A+ +F L +PD+V+++ +I+GF + + K+ YR +
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Query: 300 VAG 302
G
Sbjct: 479 EDG 481
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 159/389 (40%), Gaps = 11/389 (2%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
+N +I F+K K +EA F+ M R+ +++ LI G + D +
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLVLCNAMISGYSYCGFWGKGLQ 191
A F + +A ++ S + D+V N ++ GY G + +
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 192 LFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMY 251
LF+ +R G P T LI GL + L Q + + + LV +
Sbjct: 396 LFDDLRA-GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 252 SRFKCMNSAYGVFIGLY----QPDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADP 307
+ ++ A V+ + +PD A++ G L+ D KA + + A
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 308 ILIASLLVAS-AQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFE 366
+ I ++ + ++ ++ E + R GL + + + +I YL+ G + +++
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 367 NM-RNR---NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAG 422
M R R ++++Y +I G G QAF+ EM ++G++P+ T + LL C AG
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
Query: 423 LVKDGQEIFRRMMDEFCIPPRTEHYIHIV 451
+ + +M +E IPP Y ++
Sbjct: 635 NIDEAYRYLCKMEEE-GIPPNKYSYTMLI 662
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 320 LTDVRL---GTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNI--- 373
L D R+ + ++ ++ HG+ +I + ++D K G + ++ M+ RNI
Sbjct: 213 LRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFS 272
Query: 374 -VSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFR 432
V+YN +I+G +G +A + +M G + + L+ C GL D +
Sbjct: 273 EVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTD 332
Query: 433 RMMDEFCIPPRTEHYIHIVKLLGMAGELEEAYNFVLSLMQPVDSGIWGALLSCCDVHGNT 492
M++ P + + I+I L G +++A + S+ P D + L+ HG
Sbjct: 333 EMLNAGIYPTTSTYNIYICALCDF-GRIDDARELLSSMAAP-DVVSYNTLM-----HGYI 385
Query: 493 ELAEIVSQQLFDNEPRKG 510
++ + V L ++ R G
Sbjct: 386 KMGKFVEASLLFDDLRAG 403
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 146/372 (39%), Gaps = 13/372 (3%)
Query: 72 WNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXXXX 131
+ S+I + + + +M + +TY +++G + DLDG +
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 132 XXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCGFWG 187
+ + S +A +V + E+ D+ N++I G S
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 188 KGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSAL 247
+ M E G +P+ FT ISG ++ S + G N + + L
Sbjct: 505 EARSFLVEMVENG-LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 248 VNMYSRFKCMNSAYGVFIGLYQP----DLVAWSALITGFLQCEDYKKALFFYRNLSVAGK 303
+N Y + + A + + D ++ L+ G + + A +R + G
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 304 KADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGIL 363
D L+ ++L +++ + I ++ GL N+I+ + L+ + + G +
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 364 VFENMRNR----NIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACC 419
+ + M + N V+Y ++I G G A+AF+LF+EM KGL PD + L+ CC
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 420 HAGLVKDGQEIF 431
V+ IF
Sbjct: 744 RLNDVERAITIF 755
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 149/406 (36%), Gaps = 51/406 (12%)
Query: 69 IFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHX 128
IF +NS+I +KA + DEA SF +M+ KP+ FTY I G E +
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 129 XXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNAMISGYSYCG 184
Y K V EA + + ++ D +++G
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 185 FWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVG 244
++F MR G PD F+ LI+G + I ++ G N +
Sbjct: 607 KVDDAEEIFREMRGKG-IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 245 SALVNMYSRFKCMNSAYGVF----IGLYQPDLVAWSALITGFLQCEDYKKALFFYRNLSV 300
+ L+ + R + A + + P+ V + +I G+ + D +A + + +
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 301 AGKKADPILIASLLVASAQLTDVRLGTEIHG------------------YVLRHGL---- 338
G D + +L+ +L DV I G +V + G
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 339 ----------------ESNIIVSSALIDMYLKCGFVGLGILVFENMRNRN----IVSYNS 378
+ N + + +ID K G + +F M+N N +++Y S
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 379 VISGLGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLV 424
+++G G A+ F +F+E + G++PD S ++ A G+
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 98/564 (17%), Positives = 225/564 (39%), Gaps = 33/564 (5%)
Query: 5 FSSLLQELTKSHQTRSRTKQLHALILRSHLSHESFYATKILRFYALNDDLISAYNLFDKT 64
++SL++ + R + L + R+ + Y T +++ + DL AYN+ +
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEM 443
Query: 65 P----QRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDL 120
+ ++ ++ ++I+ F + +F +A+ +M PD F Y LI G + +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 121 DGLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFE----RDLVLCNAM 176
D R + Y + S + A K + E + VLC +
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 177 ISGYSYCGFWGKGLQLFNGMREIGKQQ--PDGFTLVGLISGLMDFSLLGIGQGIHGLCLK 234
I+ YC GK ++ + R + Q D T L++GL + + I
Sbjct: 564 IN--EYCK-KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 235 SGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKK 290
G + + L+N +S+ M A +F + + P+++ ++ L+ GF + + +K
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 291 ALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALID 350
A +SV G + + +++ + D+ + + GL + V + L+D
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 351 MYLKCGFVGLGILVFENMRN---RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL--- 404
+ V I +F + + +N++I+ + G ++ +++
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 405 -KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEH--YIHIVKLLGMAGELE 461
KP++ T + ++ C G ++ +E+F +M + +P + ++ +G E+
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 462 EAYNFVLSLMQPVDSGIWGALLSCCDVHGNTELAEIVSQQLFDNEPRKGAYKVMLSNI-- 519
++ ++ D ++ +++ G T A ++ Q+F K+ +S
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 520 ----YASDGRWDDVKRTRDNIVNV 539
+A G + ++ +N+V +
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRL 944
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 94/475 (19%), Positives = 182/475 (38%), Gaps = 61/475 (12%)
Query: 70 FLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDLDGLRILHXX 129
+ ++ +I K + ++A S +M DN TY+ LI G + + D + L
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 130 XXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFERDLV------------LC---- 173
SK + +A +F G+ L+ C
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 174 --------------NAMISGYSYCGFWGKGL---QLFNGMREIGKQ------QPDGFTLV 210
N +IS Y+Y G KG+ +G I K+ +P+
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTY-GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 211 GLISGLMDFSLLGIGQGIHGLCLKSGFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ- 269
LI + S G + + G + + ++L+ S+ K M+ A + + +
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 270 ---PDLVAWSALITGFLQCEDYKKALFFYRNLSVAGKKADPILIASLLVASAQLTDVRLG 326
P+ + A I+G+++ ++ A + + + G + +L L+ + V
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 327 TEIHGYVLRHGLESNIIVSSALIDMYLKCGFVGLGILVFENMRNRNIV----SYNSVISG 382
+ ++ G+ + + L++ K V +F MR + I SY +I+G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 383 LGLHGLAAQAFKLFEEMLEKGLKPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIP- 441
G +A +F+EM+E+GL P+ + LL C +G ++ +E ++DE +
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE----LLDEMSVKG 692
Query: 442 --PRTEHYIHIVKLLGMAGELEEAYNFV----LSLMQPVDSGIWGALLS-CCDVH 489
P Y I+ +G+L EA+ L + P DS ++ L+ CC ++
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVYTTLVDGCCRLN 746
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 191/488 (39%), Gaps = 27/488 (5%)
Query: 6 SSLLQELTKSHQTRSRTKQLHAL--ILRSHLSHESFYATKILR-FYALND--DLISAYNL 60
+ +L+ +S ++ + + LH L ++R + + TK+++ F+ L + + +
Sbjct: 90 TQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEI 149
Query: 61 FDKTPQRSIFLWNSMIRAFAKAHKFDEALSFYAKMLRTETKPDNFTYACLIRGCHENFDL 120
+K Q +F +N++I F K ++ D+A +M + PD TY +I L
Sbjct: 150 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209
Query: 121 D-GLRILHXXXXXXXXXXXXXXXXXXXTAYSKFSHVSEASKVFSGIFER----DLVLCNA 175
D L++L+ + V EA K+ + R D+ N
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLE-GGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 176 MISGYSYCGFWGKGLQLFNGMREIGKQQPDGFTLVGLISGLMDFSLLGIGQGIHGLCLKS 235
+I G G + ++ + E+ +PD + L+ L++ G+ +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNL-ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 236 GFDCNAYVGSALVNMYSRFKCMNSAYGVFIGLYQ----PDLVAWSALITGFLQCEDYKKA 291
D N S L+ R + A + + + PD ++ LI F + A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 292 LFFYRNLSVAGKKADPILIASLLVASAQLTDVRLGTEIHGYVLRHGLESNIIVSSALIDM 351
+ F + G D + ++L + EI G + G N SS+ M
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN---SSSYNTM 444
Query: 352 YLKCGFVGLGI----LVFENMRN---RNIVSYNSVISGLGLHGLAAQAFKLFEEMLEKGL 404
+ G I ++ E M N + ++YNS+IS L G+ +AF+L +M
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 405 KPDESTLSGLLCACCHAGLVKDGQEIFRRMMDEFCIPPRTEHYIHIVKLLGMAGELEEAY 464
P T + +L C A ++D + M+ C P T Y +++ +G AG EA
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETT-YTVLIEGIGFAGYRAEAM 563
Query: 465 NFVLSLMQ 472
L++
Sbjct: 564 ELANDLVR 571