Jatropha Genome Database

JcCB0424661.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0424661.10 + phase: 2 /pseudo/partial
         (338 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33630.2 | Symbols: EX1 | EX1 (EXECUTER1) | chr4:16155560-161...   256   2e-68
AT4G33630.1 | Symbols: EX1 | EX1 (EXECUTER1) | chr4:16155560-161...   256   2e-68
AT1G27510.1 | Symbols:  | INVOLVED IN: response to singlet oxyge...   123   2e-28

>AT4G33630.2 | Symbols: EX1 | EX1 (EXECUTER1) |
           chr4:16155560-16159094 FORWARD
          Length = 684

 Score =  256 bits (653), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/283 (49%), Positives = 185/283 (65%), Gaps = 3/283 (1%)

Query: 59  LAEGLPGFQNILRDMIPGMKLKVLKVTTPAKVDKDFISKVIXXXXXXXXXXXXXXXXXXX 118
           L E   GFQ+ LRDMIPG+K+KV+KVT P +VDKDFISKVI                   
Sbjct: 316 LLEESSGFQSFLRDMIPGVKVKVMKVTAPGRVDKDFISKVIEQIADEEDEENDLDIEDID 375

Query: 119 GDDELGSESDQXXXXXXXXXXXXXXX-SEGPSEISFKVVVGGLAQKFSGSMPVKESLRVP 177
            +D+  +E D+                + G  EI+ K V+G +  + SG+ P+KESLR P
Sbjct: 376 VEDDTKAEIDEKNADIELESVTDEIIDNNGGREIAVKFVIGDIVDRLSGNQPLKESLRSP 435

Query: 178 AKLEKKGRRSFLFSIEKDVNQQDSGAKEAAS-ADRKAKFQGQRSVDNIMLDLAKFIGKEK 236
           A LE     SF   +EKD+N ++S   E  +  D K   Q +R ++NIM DLAK I KEK
Sbjct: 436 ANLESVENSSFYLRLEKDLNVKESKGVEGTTLVDGKGSRQSRRRIENIMGDLAKSIEKEK 495

Query: 237 -IPLKVLKDVGDLINFTLSQAQNRQPLSGSTTFHRIEISASPDPLNGLYIGAHGLYSSEV 295
            I +K+LKDVG+L++ TLSQAQNRQ LSG T F RI+++ S DPL+GLYIGAHGLY+SEV
Sbjct: 496 KISVKMLKDVGELLSLTLSQAQNRQQLSGLTKFRRIDVTPSLDPLDGLYIGAHGLYTSEV 555

Query: 296 IQLQRKFGQWQDERGTNQPSNVEFYEYVEAVKLTGDPYIAAGQ 338
           I L+RKFGQW+  + + +P+++EFYEYVEAVKLTGDPY+ AG+
Sbjct: 556 IHLKRKFGQWKGGKESKKPTDIEFYEYVEAVKLTGDPYVPAGK 598


>AT4G33630.1 | Symbols: EX1 | EX1 (EXECUTER1) |
           chr4:16155560-16159094 FORWARD
          Length = 684

 Score =  256 bits (653), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/283 (49%), Positives = 185/283 (65%), Gaps = 3/283 (1%)

Query: 59  LAEGLPGFQNILRDMIPGMKLKVLKVTTPAKVDKDFISKVIXXXXXXXXXXXXXXXXXXX 118
           L E   GFQ+ LRDMIPG+K+KV+KVT P +VDKDFISKVI                   
Sbjct: 316 LLEESSGFQSFLRDMIPGVKVKVMKVTAPGRVDKDFISKVIEQIADEEDEENDLDIEDID 375

Query: 119 GDDELGSESDQXXXXXXXXXXXXXXX-SEGPSEISFKVVVGGLAQKFSGSMPVKESLRVP 177
            +D+  +E D+                + G  EI+ K V+G +  + SG+ P+KESLR P
Sbjct: 376 VEDDTKAEIDEKNADIELESVTDEIIDNNGGREIAVKFVIGDIVDRLSGNQPLKESLRSP 435

Query: 178 AKLEKKGRRSFLFSIEKDVNQQDSGAKEAAS-ADRKAKFQGQRSVDNIMLDLAKFIGKEK 236
           A LE     SF   +EKD+N ++S   E  +  D K   Q +R ++NIM DLAK I KEK
Sbjct: 436 ANLESVENSSFYLRLEKDLNVKESKGVEGTTLVDGKGSRQSRRRIENIMGDLAKSIEKEK 495

Query: 237 -IPLKVLKDVGDLINFTLSQAQNRQPLSGSTTFHRIEISASPDPLNGLYIGAHGLYSSEV 295
            I +K+LKDVG+L++ TLSQAQNRQ LSG T F RI+++ S DPL+GLYIGAHGLY+SEV
Sbjct: 496 KISVKMLKDVGELLSLTLSQAQNRQQLSGLTKFRRIDVTPSLDPLDGLYIGAHGLYTSEV 555

Query: 296 IQLQRKFGQWQDERGTNQPSNVEFYEYVEAVKLTGDPYIAAGQ 338
           I L+RKFGQW+  + + +P+++EFYEYVEAVKLTGDPY+ AG+
Sbjct: 556 IHLKRKFGQWKGGKESKKPTDIEFYEYVEAVKLTGDPYVPAGK 598


>AT1G27510.1 | Symbols:  | INVOLVED IN: response to singlet oxygen;
           LOCATED IN: thylakoid membrane; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; BEST
           Arabidopsis thaliana protein match is: EX1 (EXECUTER1)
           (TAIR:AT4G33630.2); Has 213 Blast hits to 208 proteins
           in 76 species: Archae - 0; Bacteria - 13; Metazoa - 63;
           Fungi - 31; Plants - 69; Viruses - 0; Other Eukaryotes -
           37 (source: NCBI BLink). | chr1:9554945-9558293 REVERSE
          Length = 651

 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 2/186 (1%)

Query: 154 KVVVGGLAQKFSGSMPVKESLRVPAKLEKKGRRSFLFSIEKDVNQQDSGAKEAASADRKA 213
           K+V+GG+      S    E +RV A +    R SF+  +     +     K   S ++  
Sbjct: 378 KLVIGGVLHNIEDSSIDDEIVRVSANIMDTERDSFILHVPGRSKRDIDTRKNRVSKEQVT 437

Query: 214 KFQGQRSVDNIMLDLAKFIGKEKIPLKVLKDVGDLINFTLSQAQNRQPLSGSTTFHRIEI 273
               Q   D +  ++A+    EK  LKV K V +++   ++QAQ    LS  T F+RI  
Sbjct: 438 ALAAQGLSDLLPPEVAEAFWGEKASLKVSKHVHEIVKLAINQAQKGNHLSEYTAFNRIIT 497

Query: 274 SASP-DPLNGLYIGAHGLYSSEVIQLQRKFGQWQDERGTNQPSNVEFYEYVEAVKLTGDP 332
             S  DP +GLY+GA G Y +E++QL+RK+G+W D  G+N  S++EF+EYVEAVKLTGDP
Sbjct: 498 PESNLDPFDGLYVGAFGPYGTEIVQLKRKYGRWDDAEGSNS-SDIEFFEYVEAVKLTGDP 556

Query: 333 YIAAGQ 338
            + AGQ
Sbjct: 557 NVPAGQ 562