Jatropha Genome Database

JcCB0420431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0420431.10 + phase: 2 /partial
         (112 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G58080.1 | Symbols: ATATP-PRT1, HISN1A | ATATP-PRT1 (ATP PHOS...    87   3e-18
AT1G09795.1 | Symbols: ATATP-PRT2, HISN1B | ATATP-PRT2 (ATP PHOS...    82   5e-17

>AT1G58080.1 | Symbols: ATATP-PRT1, HISN1A | ATATP-PRT1 (ATP
           PHOSPHORIBOSYL TRANSFERASE 1); ATP
           phosphoribosyltransferase | chr1:21504562-21507429
           REVERSE
          Length = 411

 Score = 86.7 bits (213), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 39/44 (88%), Positives = 42/44 (95%)

Query: 69  ERNEIRLGLPSKGRMASDTIDLLKDCQLSVKQVNPRQYVAQIPQ 112
           ER++IRLGLPSKGRMA+D IDLLKDCQL VKQVNPRQYVAQIPQ
Sbjct: 74  ERDQIRLGLPSKGRMAADAIDLLKDCQLFVKQVNPRQYVAQIPQ 117


>AT1G09795.1 | Symbols: ATATP-PRT2, HISN1B | ATATP-PRT2 (ATP
           PHOSPHORIBOSYL TRANSFERASE 2); ATP
           phosphoribosyltransferase | chr1:3173588-3176690 FORWARD
          Length = 413

 Score = 82.4 bits (202), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/43 (86%), Positives = 41/43 (95%)

Query: 70  RNEIRLGLPSKGRMASDTIDLLKDCQLSVKQVNPRQYVAQIPQ 112
           R +IRLGLPSKGRMA+D++DLLKDCQL VKQVNPRQYVAQIPQ
Sbjct: 77  REQIRLGLPSKGRMAADSLDLLKDCQLFVKQVNPRQYVAQIPQ 119