Jatropha Genome Database

JcCB0418081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0418081.10 - phase: 0 /partial
         (108 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21470.1 | Symbols: ATFMN/FHY | ATFMN/FHY (riboflavin kinase/...    64   1e-11

>AT4G21470.1 | Symbols: ATFMN/FHY | ATFMN/FHY (riboflavin kinase/FMN
           hydrolase); FMN adenylyltransferase/ riboflavin kinase |
           chr4:11431284-11433197 FORWARD
          Length = 379

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)

Query: 33  AVILDLDGTLLDTESATKGVLKEFLAKYGKELDKEREESKRLGMTLQDSAVAIVKDYGLP 92
            V++DLDGTL++T+     +L+++L KYGK+ D  RE  K +G T  ++A  IV+DY LP
Sbjct: 13  CVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDG-RESLKIVGKTPVEAATTIVEDYELP 71

Query: 93  LTPDQFIHEIMPMY 106
              D+F  E  P++
Sbjct: 72  CKVDEFNSEFYPLF 85