Jatropha Genome Database

JcCB0403471.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0403471.20 + phase: 0 /partial
         (245 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67030.1 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZE...   207   6e-54
AT5G67030.2 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZE...   206   9e-54

>AT5G67030.1 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZEP |
           ABA1 (ABA DEFICIENT 1); zeaxanthin epoxidase |
           chr5:26753745-26757090 REVERSE
          Length = 667

 Score =  207 bits (526), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 99/151 (65%), Positives = 115/151 (76%)

Query: 72  KHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDRIN 131
           K KGFDV VFEKDLSA+RGEGK+RGPI            ID +VAEQ+MEAGC+TGDRIN
Sbjct: 100 KKKGFDVLVFEKDLSAIRGEGKYRGPIQIQSNALAALEAIDIEVAEQVMEAGCITGDRIN 159

Query: 132 GLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDFIE 191
           GL DG+SG W+ +FD  TPA  R LPVTRVI RM LQ IL  AVG D++ N+S VVDF +
Sbjct: 160 GLVDGISGTWYVKFDTFTPAASRGLPVTRVISRMTLQQILARAVGEDVIRNESNVVDFED 219

Query: 192 DSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
              KVTV+LE+G+RY GD+LVGADGIWSKVR
Sbjct: 220 SGDKVTVVLENGQRYEGDLLVGADGIWSKVR 250


>AT5G67030.2 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZEP |
           ABA1 (ABA DEFICIENT 1); zeaxanthin epoxidase |
           chr5:26754026-26757090 REVERSE
          Length = 610

 Score =  206 bits (525), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 99/151 (65%), Positives = 115/151 (76%)

Query: 72  KHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDRIN 131
           K KGFDV VFEKDLSA+RGEGK+RGPI            ID +VAEQ+MEAGC+TGDRIN
Sbjct: 100 KKKGFDVLVFEKDLSAIRGEGKYRGPIQIQSNALAALEAIDIEVAEQVMEAGCITGDRIN 159

Query: 132 GLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDFIE 191
           GL DG+SG W+ +FD  TPA  R LPVTRVI RM LQ IL  AVG D++ N+S VVDF +
Sbjct: 160 GLVDGISGTWYVKFDTFTPAASRGLPVTRVISRMTLQQILARAVGEDVIRNESNVVDFED 219

Query: 192 DSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
              KVTV+LE+G+RY GD+LVGADGIWSKVR
Sbjct: 220 SGDKVTVVLENGQRYEGDLLVGADGIWSKVR 250