Jatropha Genome Database

JcCB0402071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0402071.10 - phase: 0 /partial
         (321 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17330.1 | Symbols: GAD, GAD1 | GAD; calmodulin binding / glu...   622   e-179
AT2G02010.1 | Symbols: GAD4 | GAD4 (glutamate decarboxylase 4); ...   611   e-175
AT3G17760.2 | Symbols: GAD5 | GAD5 (glutamate decarboxylase 5); ...   593   e-170
AT3G17760.1 | Symbols: GAD5 | GAD5 (glutamate decarboxylase 5); ...   593   e-170
AT2G02000.1 | Symbols: GAD3 | GAD3 (glutamate decarboxylase 3); ...   581   e-166
AT1G65960.2 | Symbols: GAD2 | GAD2 (GLUTAMATE DECARBOXYLASE 2); ...   580   e-166
AT1G65960.1 | Symbols: GAD2 | GAD2 (GLUTAMATE DECARBOXYLASE 2); ...   370   e-103
AT3G17720.1 | Symbols:  | pyridoxal-dependent decarboxylase fami...   257   7e-69
AT1G27980.1 | Symbols: DPL1, ATDPL1 | DPL1; carboxy-lyase/ catal...    69   5e-12

>AT5G17330.1 | Symbols: GAD, GAD1 | GAD; calmodulin binding /
           glutamate decarboxylase | chr5:5711141-5714839 FORWARD
          Length = 502

 Score =  622 bits (1605), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 293/321 (91%), Positives = 307/321 (95%)

Query: 1   MALSKTALDTDVSVHSTFASRYVRASLPRFKMPVNSIPKEAAYQIINDELMLDGNPRLNL 60
           M LS    ++DVSVHSTFASRYVR SLPRFKMP NSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAAVG 120
           ASFVTTWMEPECDKLIM+S+NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL EAE AVG
Sbjct: 61  ASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVG 120

Query: 121 VGTVGSSEAIMLAGLAFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIMLAGLAFKRKWQN+RKA+GKP+D PNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 181 VKLKPDYYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETP 240
           VKL   YYV+DP++AV+MVDENTICVAAILGSTLNGEFEDVK LNDLL+EKNKETGW+TP
Sbjct: 181 VKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTP 240

Query: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEEL 300
           IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWR+KEDLPEEL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEEL 300

Query: 301 IFHINYLGADQPTFTLNFSKG 321
           IFHINYLGADQPTFTLNFSKG
Sbjct: 301 IFHINYLGADQPTFTLNFSKG 321


>AT2G02010.1 | Symbols: GAD4 | GAD4 (glutamate decarboxylase 4);
           calmodulin binding | chr2:474375-476495 REVERSE
          Length = 493

 Score =  611 bits (1576), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 287/321 (89%), Positives = 304/321 (94%)

Query: 1   MALSKTALDTDVSVHSTFASRYVRASLPRFKMPVNSIPKEAAYQIINDELMLDGNPRLNL 60
           M LSKT  ++DVS+HSTFASRYVR SLPRF+MP NSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTVSESDVSIHSTFASRYVRNSLPRFEMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAAVG 120
           ASFVTTWMEPECDKL+M S+NKNYVDMDEYPVTTELQNRCVNMIA LFNAPLG+ EAAVG
Sbjct: 61  ASFVTTWMEPECDKLMMESINKNYVDMDEYPVTTELQNRCVNMIARLFNAPLGDGEAAVG 120

Query: 121 VGTVGSSEAIMLAGLAFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIMLAGLAFKR+WQN+RKAQG P D PNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRQWQNKRKAQGLPYDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 181 VKLKPDYYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETP 240
           V L+ DYYV+DP KAVEMVDENTICVAAILGSTL GEFEDVK LNDLL+EKNK+TGW+TP
Sbjct: 181 VNLREDYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLLVEKNKQTGWDTP 240

Query: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEEL 300
           IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV+WR+K DLP+EL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRTKTDLPDEL 300

Query: 301 IFHINYLGADQPTFTLNFSKG 321
           IFHINYLGADQPTFTLNFSKG
Sbjct: 301 IFHINYLGADQPTFTLNFSKG 321


>AT3G17760.2 | Symbols: GAD5 | GAD5 (glutamate decarboxylase 5);
           calmodulin binding | chr3:6078893-6080838 REVERSE
          Length = 494

 Score =  593 bits (1530), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 278/316 (87%), Positives = 297/316 (93%)

Query: 6   TALDTDVSVHSTFASRYVRASLPRFKMPVNSIPKEAAYQIINDELMLDGNPRLNLASFVT 65
           T  D+D  +HSTFASRYVRA +PRFKMP + +PK+AAYQ+INDELMLDGNPRLNLASFVT
Sbjct: 5   TNSDSDEHLHSTFASRYVRAVVPRFKMPDHCMPKDAAYQVINDELMLDGNPRLNLASFVT 64

Query: 66  TWMEPECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAAVGVGTVG 125
           TWMEPECDKLIM SVNKNYVDMDEYPVTTELQNRCVNMIA+LF+AP+GE EAA+G GTVG
Sbjct: 65  TWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNRCVNMIANLFHAPVGEDEAAIGCGTVG 124

Query: 126 SSEAIMLAGLAFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKEVKLKP 185
           SSEAIMLAGLAFKRKWQ+RRKAQG PID PNIVTGANVQVCWEKFARYFEVELKEVKL  
Sbjct: 125 SSEAIMLAGLAFKRKWQHRRKAQGLPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE 184

Query: 186 DYYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETPIHVDA 245
           DYYV+DP KAVEMVDENTICVAAILGSTL GEFEDVKQLNDLL EKN ETGWETPIHVDA
Sbjct: 185 DYYVMDPAKAVEMVDENTICVAAILGSTLTGEFEDVKQLNDLLAEKNAETGWETPIHVDA 244

Query: 246 ASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHIN 305
           ASGGFIAPFLYP+LEWDFRLP VKSINVSGHKYGLVYAG+GWV+WR+K+DLPEEL+FHIN
Sbjct: 245 ASGGFIAPFLYPDLEWDFRLPWVKSINVSGHKYGLVYAGVGWVVWRTKDDLPEELVFHIN 304

Query: 306 YLGADQPTFTLNFSKG 321
           YLGADQPTFTLNFSKG
Sbjct: 305 YLGADQPTFTLNFSKG 320


>AT3G17760.1 | Symbols: GAD5 | GAD5 (glutamate decarboxylase 5);
           calmodulin binding | chr3:6078893-6080838 REVERSE
          Length = 494

 Score =  593 bits (1530), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 278/316 (87%), Positives = 297/316 (93%)

Query: 6   TALDTDVSVHSTFASRYVRASLPRFKMPVNSIPKEAAYQIINDELMLDGNPRLNLASFVT 65
           T  D+D  +HSTFASRYVRA +PRFKMP + +PK+AAYQ+INDELMLDGNPRLNLASFVT
Sbjct: 5   TNSDSDEHLHSTFASRYVRAVVPRFKMPDHCMPKDAAYQVINDELMLDGNPRLNLASFVT 64

Query: 66  TWMEPECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAAVGVGTVG 125
           TWMEPECDKLIM SVNKNYVDMDEYPVTTELQNRCVNMIA+LF+AP+GE EAA+G GTVG
Sbjct: 65  TWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNRCVNMIANLFHAPVGEDEAAIGCGTVG 124

Query: 126 SSEAIMLAGLAFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKEVKLKP 185
           SSEAIMLAGLAFKRKWQ+RRKAQG PID PNIVTGANVQVCWEKFARYFEVELKEVKL  
Sbjct: 125 SSEAIMLAGLAFKRKWQHRRKAQGLPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE 184

Query: 186 DYYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETPIHVDA 245
           DYYV+DP KAVEMVDENTICVAAILGSTL GEFEDVKQLNDLL EKN ETGWETPIHVDA
Sbjct: 185 DYYVMDPAKAVEMVDENTICVAAILGSTLTGEFEDVKQLNDLLAEKNAETGWETPIHVDA 244

Query: 246 ASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHIN 305
           ASGGFIAPFLYP+LEWDFRLP VKSINVSGHKYGLVYAG+GWV+WR+K+DLPEEL+FHIN
Sbjct: 245 ASGGFIAPFLYPDLEWDFRLPWVKSINVSGHKYGLVYAGVGWVVWRTKDDLPEELVFHIN 304

Query: 306 YLGADQPTFTLNFSKG 321
           YLGADQPTFTLNFSKG
Sbjct: 305 YLGADQPTFTLNFSKG 320


>AT2G02000.1 | Symbols: GAD3 | GAD3 (glutamate decarboxylase 3);
           calmodulin binding | chr2:469505-471997 REVERSE
          Length = 500

 Score =  581 bits (1498), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 271/321 (84%), Positives = 297/321 (92%)

Query: 1   MALSKTALDTDVSVHSTFASRYVRASLPRFKMPVNSIPKEAAYQIINDELMLDGNPRLNL 60
           M LSKTA  +D S+HSTFASRYVR S+ RF++P NSIPKEAAYQIINDEL  DGNPRLNL
Sbjct: 1   MVLSKTASKSDDSIHSTFASRYVRNSISRFEIPKNSIPKEAAYQIINDELKFDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAAVG 120
           ASFVTTWMEPECDKL+M S+NKN V+MD+YPVTT+LQNRCVNMIA LFNAPLG+ EAA+G
Sbjct: 61  ASFVTTWMEPECDKLMMESINKNNVEMDQYPVTTDLQNRCVNMIARLFNAPLGDGEAAIG 120

Query: 121 VGTVGSSEAIMLAGLAFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEA+MLAGLAFKR+WQN+RKA G P D PNIVTGAN+QVC EKFARYFEVELKE
Sbjct: 121 VGTVGSSEAVMLAGLAFKRQWQNKRKALGLPYDRPNIVTGANIQVCLEKFARYFEVELKE 180

Query: 181 VKLKPDYYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETP 240
           VKL+  YYV+DP+KAVEMVDENTICV AILGSTL GEFEDVK LNDLL+EKNK+TGW+TP
Sbjct: 181 VKLREGYYVMDPDKAVEMVDENTICVVAILGSTLTGEFEDVKLLNDLLVEKNKKTGWDTP 240

Query: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEEL 300
           IHVDAASGGFIAPFLYP+LEWDFRLPLVKSINVSGHKYGLVYAGIGWV+WR+K DLP+EL
Sbjct: 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRTKTDLPDEL 300

Query: 301 IFHINYLGADQPTFTLNFSKG 321
           IFHINYLGADQPTFTLNFSKG
Sbjct: 301 IFHINYLGADQPTFTLNFSKG 321


>AT1G65960.2 | Symbols: GAD2 | GAD2 (GLUTAMATE DECARBOXYLASE 2);
           calmodulin binding / glutamate decarboxylase |
           chr1:24552094-24557253 FORWARD
          Length = 494

 Score =  580 bits (1495), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 274/321 (85%), Positives = 297/321 (92%), Gaps = 1/321 (0%)

Query: 1   MALSKTALDTDVSVHSTFASRYVRASLPRFKMPVNSIPKEAAYQIINDELMLDGNPRLNL 60
           M L+KTA + D SV + F SRYVR +LP++++  NSIPK+AAYQII DELMLDGNPRLNL
Sbjct: 1   MVLTKTATN-DESVCTMFGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNL 59

Query: 61  ASFVTTWMEPECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAAVG 120
           ASFVTTWMEPECDKLIM S+NKNYVDMDEYPVTTELQNRCVN+IA LFNAPL E+E AVG
Sbjct: 60  ASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEESETAVG 119

Query: 121 VGTVGSSEAIMLAGLAFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIMLAGLAFKRKWQN+RKA+GKP D PNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 120 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 179

Query: 181 VKLKPDYYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETP 240
           V L   YYV+DP+KA EMVDENTICVAAILGSTLNGEFEDVK+LNDLL++KN+ETGW TP
Sbjct: 180 VNLSEGYYVMDPDKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVKKNEETGWNTP 239

Query: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEEL 300
           IHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV+WR+ EDLPEEL
Sbjct: 240 IHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRAAEDLPEEL 299

Query: 301 IFHINYLGADQPTFTLNFSKG 321
           IFHINYLGADQPTFTLNFSKG
Sbjct: 300 IFHINYLGADQPTFTLNFSKG 320


>AT1G65960.1 | Symbols: GAD2 | GAD2 (GLUTAMATE DECARBOXYLASE 2);
           calmodulin binding / glutamate decarboxylase |
           chr1:24555868-24557253 FORWARD
          Length = 365

 Score =  370 bits (951), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 171/191 (89%), Positives = 182/191 (95%)

Query: 131 MLAGLAFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKEVKLKPDYYVL 190
           MLAGLAFKRKWQN+RKA+GKP D PNIVTGANVQVCWEKFARYFEVELKEV L   YYV+
Sbjct: 1   MLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVNLSEGYYVM 60

Query: 191 DPEKAVEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETPIHVDAASGGF 250
           DP+KA EMVDENTICVAAILGSTLNGEFEDVK+LNDLL++KN+ETGW TPIHVDAASGGF
Sbjct: 61  DPDKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVKKNEETGWNTPIHVDAASGGF 120

Query: 251 IAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGAD 310
           IAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV+WR+ EDLPEELIFHINYLGAD
Sbjct: 121 IAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRAAEDLPEELIFHINYLGAD 180

Query: 311 QPTFTLNFSKG 321
           QPTFTLNFSKG
Sbjct: 181 QPTFTLNFSKG 191


>AT3G17720.1 | Symbols:  | pyridoxal-dependent decarboxylase family
           protein | chr3:6062446-6063483 FORWARD
          Length = 194

 Score =  257 bits (656), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 125/162 (77%), Positives = 135/162 (83%), Gaps = 3/162 (1%)

Query: 91  PVTTELQNRCVNMIAHLFNAPLGEAEAAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAQGK 150
           P  T L NRCVNMIA+LF+AP+G+ EA +  G V SSE+   AGLAFK KWQ+RRKAQG 
Sbjct: 27  PTPTSLDNRCVNMIANLFHAPVGQDEAVISCGIVASSES---AGLAFKMKWQHRRKAQGL 83

Query: 151 PIDNPNIVTGANVQVCWEKFARYFEVELKEVKLKPDYYVLDPEKAVEMVDENTICVAAIL 210
           PID PNIVTG NVQVCWEKFARYFEVELKEVKL  DYYV+DP KAVEMVDEN+ICVAAIL
Sbjct: 84  PIDKPNIVTGVNVQVCWEKFARYFEVELKEVKLSEDYYVMDPAKAVEMVDENSICVAAIL 143

Query: 211 GSTLNGEFEDVKQLNDLLMEKNKETGWETPIHVDAASGGFIA 252
           GST  GEFE VK LNDLL EKN +T WETPIHVDAASGGFIA
Sbjct: 144 GSTFTGEFEYVKLLNDLLAEKNAKTAWETPIHVDAASGGFIA 185


>AT1G27980.1 | Symbols: DPL1, ATDPL1 | DPL1; carboxy-lyase/
           catalytic/ pyridoxal phosphate binding |
           chr1:9748812-9752618 FORWARD
          Length = 544

 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 25/223 (11%)

Query: 81  NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAAVGVG-----TVGSSEAIMLAGL 135
           + N + +D +      ++  V M A L    LG  E A G       T G +E+I+LA +
Sbjct: 160 HTNPLHIDVFQSVVRFESEVVAMTAAL----LGSKETASGGQICGNMTSGGTESIVLA-V 214

Query: 136 AFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKEVKLKPDYYVLDPEKA 195
              R +   +K     I  P ++   +    ++K A+YF+++L  V +  D+   D +  
Sbjct: 215 KSSRDYMKYKKG----ITRPEMIIPESGHSAYDKAAQYFKIKLWRVPVDKDFRA-DVKAT 269

Query: 196 VEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETPIHVDAASGGFIAPFL 255
              ++ NTI +        +G  + +++L  L +       +    HVD   GGF+ PF 
Sbjct: 270 RRHINRNTIMIVGSAPGFPHGIIDPIEELGQLALS------YGICFHVDLCLGGFVLPFA 323

Query: 256 ----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKE 294
               Y    +DF +  V SI+V  HKYGL   G   V++R+ E
Sbjct: 324 RKLGYQIPPFDFSVQGVTSISVDVHKYGLAPKGTSTVLYRNHE 366