Jatropha Genome Database
- JcCB0398461.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0398461.10 + phase: 0
(384 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07870.1 | Symbols: | F-box family protein | chr3:2510871-25... 303 1e-82
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 102 3e-22
AT3G23880.1 | Symbols: | F-box family protein | chr3:8622061-86... 93 3e-19
AT4G12560.2 | Symbols: | F-box family protein | chr4:7441815-74... 92 8e-19
AT4G12560.1 | Symbols: | F-box family protein | chr4:7441815-74... 92 8e-19
AT3G16210.1 | Symbols: | F-box family protein | chr3:5494533-54... 79 6e-15
AT1G55070.1 | Symbols: | F-box family protein | chr1:20551452-2... 74 2e-13
AT5G49610.1 | Symbols: | F-box family protein | chr5:20131448-2... 71 1e-12
AT1G53550.1 | Symbols: | F-box family protein | chr1:19983411-1... 71 1e-12
AT2G02660.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 1e-11
AT4G22390.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 1e-11
AT3G23260.1 | Symbols: | F-box family protein | chr3:8313334-83... 67 1e-11
AT2G16220.1 | Symbols: | F-box family protein | chr2:7030155-70... 67 1e-11
AT2G27520.1 | Symbols: | F-box family protein | chr2:11762061-1... 67 2e-11
AT2G34280.1 | Symbols: | S locus F-box-related / SLF-related | ... 65 5e-11
AT1G71320.1 | Symbols: | S locus F-box-related / SLF-related | ... 65 7e-11
AT1G47340.1 | Symbols: | F-box family protein | chr1:17354123-1... 64 1e-10
AT1G33530.1 | Symbols: | F-box family protein | chr1:12159884-1... 64 1e-10
AT3G57590.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT4G38870.1 | Symbols: | F-box family protein | chr4:18132583-1... 62 5e-10
AT1G50870.1 | Symbols: | F-box family protein | chr1:18855147-1... 62 6e-10
AT3G49450.1 | Symbols: | F-box family protein | chr3:18337305-1... 62 7e-10
AT1G47790.1 | Symbols: | F-box family protein | chr1:17600004-1... 61 1e-09
AT5G42430.1 | Symbols: | F-box family protein | chr5:16971312-1... 60 2e-09
AT1G13200.1 | Symbols: | F-box family protein | chr1:4507221-45... 60 2e-09
AT1G09650.1 | Symbols: | F-box family protein | chr1:3125978-31... 60 2e-09
AT4G10190.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-lik... 60 3e-09
AT5G18160.1 | Symbols: | F-box family protein | chr5:6002770-60... 59 4e-09
AT4G21240.1 | Symbols: | F-box family protein | chr4:11322411-1... 59 5e-09
AT3G20690.1 | Symbols: | F-box protein-related | chr3:7231570-7... 59 6e-09
AT5G15660.1 | Symbols: | F-box family protein | chr5:5095652-50... 57 3e-08
AT1G32600.1 | Symbols: | F-box family protein-related | chr1:11... 56 3e-08
AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-1... 56 4e-08
AT1G32420.1 | Symbols: | F-box family protein | chr1:11701995-1... 55 6e-08
AT4G19930.1 | Symbols: | F-box family protein | chr4:10803558-1... 55 8e-08
AT3G47030.1 | Symbols: | F-box family protein | chr3:17322171-1... 55 9e-08
AT3G17540.1 | Symbols: | F-box family protein | chr3:6002783-60... 54 2e-07
AT3G17480.1 | Symbols: | F-box family protein | chr3:5983199-59... 54 2e-07
AT3G17710.1 | Symbols: | F-box family protein | chr3:6055597-60... 54 2e-07
AT3G17560.1 | Symbols: | F-box family protein | chr3:6006762-60... 54 2e-07
AT2G43260.1 | Symbols: | F-box family protein / S locus-related... 54 2e-07
AT1G52490.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 3e-07
AT1G53790.2 | Symbols: | F-box family protein | chr1:20079558-2... 52 5e-07
AT1G53790.1 | Symbols: | F-box family protein | chr1:20079694-2... 52 6e-07
AT3G08750.1 | Symbols: | F-box family protein | chr3:2656716-26... 52 6e-07
AT1G12860.1 | Symbols: SCRM2, ICE2 | SCRM2 (SCREAM 2); DNA bindi... 52 8e-07
AT3G10240.1 | Symbols: | F-box protein-related | chr3:3166698-3... 52 8e-07
AT1G53360.1 | Symbols: | F-box family protein-related | chr1:19... 51 1e-06
AT1G62270.1 | Symbols: | F-box family protein | chr1:23004499-2... 50 2e-06
AT3G17570.1 | Symbols: | F-box family protein | chr3:6009413-60... 50 2e-06
AT1G15680.1 | Symbols: | F-box family protein | chr1:5393407-53... 50 2e-06
AT1G47730.1 | Symbols: | F-box family protein | chr1:17563931-1... 50 2e-06
AT2G23160.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 4e-06
AT3G62380.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 4e-06
AT3G20620.1 | Symbols: | F-box family protein-related | chr3:71... 49 5e-06
AT3G23960.1 | Symbols: | F-box family protein | chr3:8657736-86... 48 9e-06
>AT3G07870.1 | Symbols: | F-box family protein |
chr3:2510871-2512124 FORWARD
Length = 417
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/397 (44%), Positives = 242/397 (60%), Gaps = 18/397 (4%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRS-LAQDPLLAPLHFSRMDRTANPCLILH 59
++SLP +I +I SRL I+S+ + VCRSWRS L Q L+ S PCL+LH
Sbjct: 25 LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLS----SSSSSPTKPCLLLH 80
Query: 60 YDLPIQNHLYTLHFSDHGSIETPTRIHIPMIS---ELAIVGSCNGLLCLWHSLYKDECYI 116
D PI+N L+ L S+ + + S E +VGSCNGLLCL SLY D Y+
Sbjct: 81 CDSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYL 140
Query: 117 YNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYS 176
YNPF+ + +LP+ + +V GFGFHE+TKEYKV++IVY++ + + R
Sbjct: 141 YNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGR 200
Query: 177 L-LPESEVQVLSLG----NGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAP 231
+ +SEVQ+L+L + S++WRS+G ++ ++ S+ L+NGRLH++T RH
Sbjct: 201 IQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKF-VKRSSEALVNGRLHFVTRPRRHVPD 259
Query: 232 RQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRG-YGQLGVWVMKEYGVQ 290
R+ +SFDL DE+FKEIP P+ LV L+GCL AVV G YG+L +WVMK YGV+
Sbjct: 260 RKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVK 319
Query: 291 DSWTKEFVIKSHLP--LKW-LDEPYFNGSFNLSLSKARVLCSLRNGEILLEYKGRSIVSY 347
+SW KE+ I ++LP LK LD P + + RVLC L NGEILLEYK R +V+Y
Sbjct: 320 ESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVLVAY 379
Query: 348 NPNFGTFKELSFQCLPECFNVVVHMGSLCWIDTPIDL 384
+P G FK+L F LP F+ VVH G+L W DTP+DL
Sbjct: 380 DPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDTPLDL 416
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD
Length = 427
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 172/398 (43%), Gaps = 98/398 (24%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
LP EI IL RL S+ + V + + +L+ DP A +H + R + LH L
Sbjct: 36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNES-VRSLHRKLI 94
Query: 64 IQNH-LYTLHFS-------DHGSIE--TPTRIHIPMISEL-------------------- 93
+ +H LY+L F+ D ++E P + + SE+
Sbjct: 95 VSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLN 154
Query: 94 ---------AIVGSCNGLLCLWHSLYKDECYIYNPFSRHYTKLP-----KPEQFQTQKRV 139
IVGS NGL+C+ S + ++YNP + +LP K +++
Sbjct: 155 AKSYRRNWVEIVGSSNGLVCI--SPGEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQ 212
Query: 140 VLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYSLLPESEVQVLSLGNGSVTWRSIG 199
GFGF +T +YK+V++V + D L YSL +S WR I
Sbjct: 213 TYGFGFDGLTDDYKLVKLVATSE-----DILDASVYSLKADS-------------WRRIC 254
Query: 200 NRSFQLGIQS-QSQVLINGRLHWLTDQLRHQAPRQLISFDLRDEKFKEIPSPNDRRFAIF 258
N +++ S S V NG +HW+ + RH R +++FD++ E+F+E+P P++ A
Sbjct: 255 NLNYEHNDGSYTSGVHFNGAIHWVFTESRHNQ-RVVVAFDIQTEEFREMPVPDE---AED 310
Query: 259 CSH----LVI--LRGCLSAVVRGYG-QLGVWVMKEYGVQDSWTKEFVIKSHLPLKWLDEP 311
CSH V+ L G L V Y +WVM EYG SW++ +
Sbjct: 311 CSHRFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSRIRI------------- 357
Query: 312 YFNGSFNLSLSKARVLCSLRNG-EILLEYKGRSIVSYN 348
NL + LCS +N E+LLE G +V YN
Sbjct: 358 ------NLLYRSMKPLCSTKNDEEVLLELDG-DLVLYN 388
>AT3G23880.1 | Symbols: | F-box family protein |
chr3:8622061-8623155 REVERSE
Length = 364
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 141/318 (44%), Gaps = 50/318 (15%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHF------SRMDRTANPCL 56
+LP E+ IL RL + SL K VC SWRSL + L A H T +P
Sbjct: 13 NLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYG 72
Query: 57 IL-----HYDLPIQNHLY---TLHFSDHGSIETPTRIHIPMISELAIVGSCNGLLCLWHS 108
++ H + LY T++ S+H E R + +VG+C+GL+C +H
Sbjct: 73 VITTSRYHLKSCCIHSLYNASTVYVSEHDG-ELLGRDY------YQVVGTCHGLVC-FHV 124
Query: 109 LYKDECYIYNPFSRHYTKLPKPEQFQTQKRVVL--GFGFHEITKEYKVVRIVYYKKEDEE 166
Y Y++NP + +L + + V+ GFG+ E +YKVV ++ + + +
Sbjct: 125 DYDKSLYLWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESEDDYKVVALLQQRHQVKI 184
Query: 167 VDNLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGI----QSQSQVLINGRLHWL 222
+ R L WRS N SF G+ +S+S + ING L+
Sbjct: 185 ETKIYSTRQKL-----------------WRS--NTSFPSGVVVADKSRSGIYINGTLN-- 223
Query: 223 TDQLRHQAPRQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGYG-QLGV 281
+ +IS+D+ ++FKE+P P F L LRGCLS V G V
Sbjct: 224 WAATSSSSSWTIISYDMSRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKGANADV 283
Query: 282 WVMKEYGVQDSWTKEFVI 299
WVMKE+G SW+K I
Sbjct: 284 WVMKEFGEVYSWSKLLSI 301
>AT4G12560.2 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 413
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 159/358 (44%), Gaps = 43/358 (12%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
M ++P +I +I RL +L+ +++ + L DP H R+ +T + +IL
Sbjct: 1 MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMIL-- 58
Query: 61 DLPIQNHLYTLHFSDHGSIETPTRIHIPMI--SELAIVGSCNGLLCLWHSLYKDECYIYN 118
L LY++ D S+++ + + PM + GS NGL+ L +S + ++N
Sbjct: 59 -LRGALRLYSV---DLDSLDSVSDVEHPMKRGGPTEVFGSSNGLIGLSNS--PTDLAVFN 112
Query: 119 PFSRHYTKLPK-----PEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLR 173
P +R +LP P+ T+ V G G+ ++ +YKVVR+V +K + E+
Sbjct: 113 PSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSF- 171
Query: 174 RYSLLPESEVQVLSLGNGSVTWRSIGNRS----------FQLGIQSQSQVLINGRLHWLT 223
EV+V SL S W+ I + + + L + VL LHW+
Sbjct: 172 ------PYEVKVFSLKKNS--WKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVL 223
Query: 224 DQLRHQAPRQLI-SFDLRDEKFK--EIPSPNDRRFAIFCSHLVILRGCLSAVVRGYGQ-- 278
+ LI FDL E+F+ P + +L GCL ++ Y Q
Sbjct: 224 PRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCL-CLMCNYDQSY 282
Query: 279 LGVWVMKEYGVQDSWTKEFVIKSHLPLKWLDEPYFNGSFNLSLSKARVLCSLRNGEIL 336
+ VW+MKEY V+DSWTK F ++ +K + S K +VL L N +++
Sbjct: 283 VDVWMMKEYNVRDSWTKVFTVQKPKSVKSFS---YMRPLVYSKDKKKVLLELNNTKLV 337
>AT4G12560.1 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 413
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 159/358 (44%), Gaps = 43/358 (12%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
M ++P +I +I RL +L+ +++ + L DP H R+ +T + +IL
Sbjct: 1 MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMIL-- 58
Query: 61 DLPIQNHLYTLHFSDHGSIETPTRIHIPMI--SELAIVGSCNGLLCLWHSLYKDECYIYN 118
L LY++ D S+++ + + PM + GS NGL+ L +S + ++N
Sbjct: 59 -LRGALRLYSV---DLDSLDSVSDVEHPMKRGGPTEVFGSSNGLIGLSNS--PTDLAVFN 112
Query: 119 PFSRHYTKLPK-----PEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLR 173
P +R +LP P+ T+ V G G+ ++ +YKVVR+V +K + E+
Sbjct: 113 PSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSF- 171
Query: 174 RYSLLPESEVQVLSLGNGSVTWRSIGNRS----------FQLGIQSQSQVLINGRLHWLT 223
EV+V SL S W+ I + + + L + VL LHW+
Sbjct: 172 ------PYEVKVFSLKKNS--WKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVL 223
Query: 224 DQLRHQAPRQLI-SFDLRDEKFK--EIPSPNDRRFAIFCSHLVILRGCLSAVVRGYGQ-- 278
+ LI FDL E+F+ P + +L GCL ++ Y Q
Sbjct: 224 PRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCL-CLMCNYDQSY 282
Query: 279 LGVWVMKEYGVQDSWTKEFVIKSHLPLKWLDEPYFNGSFNLSLSKARVLCSLRNGEIL 336
+ VW+MKEY V+DSWTK F ++ +K + S K +VL L N +++
Sbjct: 283 VDVWMMKEYNVRDSWTKVFTVQKPKSVKSFS---YMRPLVYSKDKKKVLLELNNTKLV 337
>AT3G16210.1 | Symbols: | F-box family protein |
chr3:5494533-5495615 REVERSE
Length = 360
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
LP E+A+ IL RL++ L + VC++WR L DP F+ R +P + +
Sbjct: 5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDP-----GFTETYRDMSPAKFVSF--- 56
Query: 64 IQNHLYTLHFSDHGSIETPTRIHIP----MISELAIVGSCNGLLCLWHSLYKDECYIYNP 119
+ Y L + T ++ P MI E V C+G LC+ +L ++NP
Sbjct: 57 YDKNFYMLDVEGKHPVIT-NKLDFPLDQSMIDESTCVLHCDGTLCV--TLKNHTLMVWNP 113
Query: 120 FSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYSLLP 179
FS+ + +P P +Q +LGFG+ + +YKVV +D L +
Sbjct: 114 FSKQFKIVPNPGIYQDSN--ILGFGYDPVHDDYKVVTF---------IDRLDV------- 155
Query: 180 ESEVQVLSLGNGSVTWRSIGNRSF-QLGIQSQSQVLINGRLHWLTDQLRHQAPRQLISFD 238
S V GS W S+ + + ++ L+W+ R A R ++ F+
Sbjct: 156 -STAHVFEFRTGS--WGESLRISYPDWHYRDRRGTFLDQYLYWIA--YRSSADRFILCFN 210
Query: 239 LRDEKFKEIPSP 250
L +++++P P
Sbjct: 211 LSTHEYRKLPLP 222
>AT1G55070.1 | Symbols: | F-box family protein |
chr1:20551452-20552633 FORWARD
Length = 393
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 141/346 (40%), Gaps = 55/346 (15%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDP---LLAPLHFSRMDR-----TA 52
D +P ++ + ILS+L+ S+ + VC+ S+ + P L P+ + R
Sbjct: 32 FDRIPADLVIKILSKLSAKSMAKCRCVCKLLSSIIRQPNYNQLFPIKYPDPPRFIFTFLG 91
Query: 53 NPCLILHYDLPIQNHLYTLHFSDHGSIETPTRIHIPMISELA-IVGSCNGLLCLWHSLYK 111
L + +N ++ S+ H + + + I+ S +GL+C +
Sbjct: 92 GGMLFSYTSTQPENP------DENSSLVATAHHHTDIPRDFSQILSSVHGLVCYHRKIKN 145
Query: 112 DECY-IYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIV-YYKKEDEEVDN 169
D + IYNP + Y LP E T +G+ I K +KV+ + + EE D+
Sbjct: 146 DTVFVIYNPITGQYVTLPILEAHATINYFAIGYD--PINKRFKVLCVTSVHHGTGEEFDS 203
Query: 170 LQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQ 229
+ +V G ++ WR I R + + I G L++ ++
Sbjct: 204 ----------QHQVLTFETGRRNLFWRKIQCRRHYYTHRYHKGICIKGVLYYAATSMKPM 253
Query: 230 APRQLISFDLRDEKFKEI----PSPNDRRFAIFCSHLVILRGCLSAVVRGYGQLGVWVMK 285
++ FD+R EKF I PS L+ +G L ++ L +WV+
Sbjct: 254 LGPMIVCFDVRSEKFGFITWKPPS------------LINYKGKLGSINSNDNDLVLWVL- 300
Query: 286 EYGVQDSWTKEFVIKSHLPLKWLDEPYFNG---SFNLSLSKARVLC 328
E+G + W+K +K PL+W P FNG +F ++ V C
Sbjct: 301 EHGQERKWSKHIYVK---PLQW---PEFNGIDVNFLVTSKGEAVFC 340
>AT5G49610.1 | Symbols: | F-box family protein |
chr5:20131448-20132527 REVERSE
Length = 359
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 56/312 (17%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
P E+ L IL+RL + SL KSVC+SW L D L L
Sbjct: 9 FPDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTS---------------LFNQLS 53
Query: 64 IQNHLYTLHFSDHGSIETPTRIHIPMISELA---------IVGSCNGLLCLWHSLYKDEC 114
++ L SD S+ + +SEL+ I S NGLLC K
Sbjct: 54 VKEQLLVAEVSDSSSLICVDNLR--GVSELSLDFVRDRVRIRVSSNGLLCCSSIPEKGVY 111
Query: 115 YIYNPFSRHYTKLPKPEQ------FQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVD 168
Y+ NP +R Y KLPK + + + ++G ++ VV Y+
Sbjct: 112 YVCNPSTREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYH-------- 163
Query: 169 NLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQ---VLINGRLHWLTDQ 225
R + P+ L + S WR + + S+ V +NG LHWL
Sbjct: 164 ----RSFGQRPDGSFICLVFDSESNKWRKFVSVLEECSFTHMSKNQVVFVNGMLHWLMSG 219
Query: 226 LRHQAPRQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVIL---RGCLSAVVRGYGQLGVW 282
L + +++ D+ + +++I P++ R + V L G LS + + +W
Sbjct: 220 LCY-----ILALDVEHDVWRKISLPDEIRIGNGGGNRVYLLESDGFLSVIQLSDVWMKIW 274
Query: 283 VMKEYGVQDSWT 294
M EY + +W+
Sbjct: 275 KMSEYETE-TWS 285
>AT1G53550.1 | Symbols: | F-box family protein |
chr1:19983411-19984637 FORWARD
Length = 408
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 139/310 (44%), Gaps = 38/310 (12%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
D +P ++ +NILSRL++ + + V + W S+ + P L + +A P L+ +
Sbjct: 32 FDPIPVDLVINILSRLSLECIARCRCVSKLWSSIIRRPNYNQLF--PVKSSATPRLLFVF 89
Query: 61 DLPIQNHLYT--LHFSDHGSIETPTRIHIPMISELA-IVGSCNGLLCLWHSLYKDECYIY 117
+ + + HF+ + S T + + + + +GL+C H +E Y++
Sbjct: 90 KVARELFFNSSPQHFNPNNSSLVATSLQKTSSTRFSQLCRPVHGLICSQH---IEENYLF 146
Query: 118 ----NPFSRHYTKLPKP--EQFQTQ---KRVVLGFGFHEITKEYKVVRIVYYKKEDEEVD 168
NP + Y LPK E+ ++ ++V FG+ I K++KV+RI + + E
Sbjct: 147 ALISNPTTGEYIALPKQRMEEMNSETIIEKVRYSFGYDPIDKQFKVLRITWLHRGSHEWS 206
Query: 169 NLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLT--DQL 226
SE QVL+LG G+++WR+ ++ S + ING L++ D
Sbjct: 207 ------------SEYQVLTLGFGNISWRNTQCCVVHYLLE-DSGICINGVLYYPARLDNR 253
Query: 227 RHQAPRQLISFDLRDEKFKEIPSPNDRRFAIFCS-HLVILRGCLSAVVRGYGQLGVWVMK 285
++ ++ FD+ EKF D S L+ +G L A + + +WV+
Sbjct: 254 KY----TIVCFDVMTEKFSFTSIDKDMTIMTNLSFSLIDYKGKLGACICDHTLFELWVL- 308
Query: 286 EYGVQDSWTK 295
E + W+K
Sbjct: 309 ENAEEHKWSK 318
>AT2G02660.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s: F-box
associated type 3 (InterPro:IPR013187), F-box associated
type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein
(TAIR:AT2G02890.1); Has 533 Blast hits to 502 proteins
in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2;
Fungi - 0; Plants - 531; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr2:738504-739769 FORWARD
Length = 421
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 153/412 (37%), Gaps = 104/412 (25%)
Query: 15 RLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILH-YDLPIQNHLYTLHF 73
RL+ S+ + V + W S+ P L +R +A P L+ D I+ Y++ F
Sbjct: 3 RLSSKSVARFRCVSKQWASMFASPYFRKLFQTR--SSAKPSLLFAIADYGIEED-YSMKF 59
Query: 74 SDHGSIETPTRIHIPMISELA-----------------------IVGSCNGLLCLWHSLY 110
+E P P + A +G +GL+ ++ Y
Sbjct: 60 FSSPQLENPYEKSSPTLVAAAEFHVKFSPDKLIPINHSYDPRYFSIGYASGLIYIYGDRY 119
Query: 111 KDECYIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNL 170
I NP + Y LP T ++ FGF I K+YK + I Y
Sbjct: 120 VARPLICNPNTGRYVILPNR---YTYRKAYSFFGFDPIGKQYKALSIAYPSDPGRH---- 172
Query: 171 QLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQA 230
++L+LG+G +TWR I + GI+ + ING L++L ++ ++
Sbjct: 173 -------------KILTLGDGDLTWRKIKCPVPRPGIKGDG-ICINGVLYFLAERNELES 218
Query: 231 PRQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAV------------------ 272
++ FD+R EKF I R L+ +G L+ +
Sbjct: 219 DYVIVCFDVRSEKFTYIDVERICR-------LINYKGKLAMIYWEDDVDIYEINHMAGKN 271
Query: 273 ----------VRGYGQLGVWVMKEYGVQDSWTKEFVIKSHLPLKWLDEPYFNGSFNLSLS 322
V +L VWV+++ Q+ W+K W D+ +F +LS++
Sbjct: 272 LDKYLEENLDVDATNELHVWVLEDVEKQE-WSK-------YAYTWTDDTFFRR--HLSIA 321
Query: 323 KARVLCSLRNGEILLEYKGRS------IVSYNPNFGTFKELSFQCLPECFNV 368
A V +GEI+ + + + +NP T + + Q E F
Sbjct: 322 GATV-----SGEIVFSIRKYTSKQPFYVFYFNPESNTLQRVETQGFGEAFKA 368
>AT4G22390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
F-box associated type 1 (InterPro:IPR017451); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT4G12560.2); Has 662 Blast hits to 662
proteins in 37 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 662; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr4:11813757-11815074 REVERSE
Length = 402
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 135/306 (44%), Gaps = 22/306 (7%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
M P ++ + RL T+L+ + + + SL P H R T +IL
Sbjct: 1 MAECPTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMIL-- 58
Query: 61 DLPIQNHLYTLHFSDHGSI-ETPTRIHIPMISELAIVGSCNGLLCLWHSLYKDECYIYNP 119
L L T+ ++ + P + +E + GS NG++ L +S + I+NP
Sbjct: 59 -LRGPRLLRTVELDSPENVSDIPHPLQAGGFTE--VFGSFNGVIGLCNSPV--DLAIFNP 113
Query: 120 FSRHYTKLPK-----PEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVD---NLQ 171
+R +LP PE+ T++ V G G+ + ++KVVRIV K ++ + ++
Sbjct: 114 STRKIHRLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVE 173
Query: 172 LRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQ-A 230
++ +SL S +V + + W S + L + V++N LHW+ + + A
Sbjct: 174 VKVFSLKKNSWKRVCLMFEFQILWISY---YYHLLPRRGYGVVVNNHLHWILPRRQGVIA 230
Query: 231 PRQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRG-YGQLGVWVMKEYGV 289
+I +DL + + P + + + +L GC+ + Y + VWV+KEY
Sbjct: 231 FNAIIKYDLASDDIGVLSFPQEL-YIEDNMDIGVLDGCVCLMCYDEYSHVDVWVLKEYED 289
Query: 290 QDSWTK 295
SWTK
Sbjct: 290 YKSWTK 295
>AT3G23260.1 | Symbols: | F-box family protein |
chr3:8313334-8314422 FORWARD
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 138/313 (44%), Gaps = 42/313 (13%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDL 62
SLP E+ ILSR+ L ++S + W +L++ A H + T P +I+ D
Sbjct: 5 SLPVELQEEILSRVPAKYLARLRSTSKQWNALSKTGSFAKKH--SANATKEPLIIMLKDS 62
Query: 63 PI---QNHLYTLHFSDHGSIETPTRIHI--PMISELAIVGSCNGLLCLWHSLYKDECYIY 117
+ +L+ +H + S E +R+++ P IS V C+GLL L S+ ++ ++
Sbjct: 63 RVYLASVNLHGVHNNVAQSFELGSRLYLKDPHISN---VFHCDGLLLLC-SIKENTLEVW 118
Query: 118 NPFSRHYTKLPKPEQ--FQTQKRVVLGFGFHEITKEYKVVRIV--YYKKEDEEVDNLQLR 173
NP S KL KP ++ LG+ K+YKV+R++ + + D ++
Sbjct: 119 NPCSGE-AKLIKPRHSYYKESDFYALGYDNKSSCKKYKVLRVISQVHVQGDFKI------ 171
Query: 174 RYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQ 233
E ++ N S WR G + +L I+ + V + G +W+ R+ +
Sbjct: 172 --------EYEIYDFTNDS--WRVHGATT-ELSIRQKHPVSVKGSTYWVVRN-RYFPYKY 219
Query: 234 LISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGYG------QLGVWVMKEY 287
+SFD E+F+ + P + F + L ++R + Y L VWV
Sbjct: 220 FLSFDFSTERFQSLSLP--QPFPYLVTDLSVVREEQLCLFGYYNWSTTSEDLNVWVTTSL 277
Query: 288 GVQDSWTKEFVIK 300
G SW+K I+
Sbjct: 278 GSVVSWSKFLTIQ 290
>AT2G16220.1 | Symbols: | F-box family protein |
chr2:7030155-7031378 REVERSE
Length = 407
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 134/341 (39%), Gaps = 74/341 (21%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
L ++ L +LSRL + S+ V + W S+ P L +R +A P L+
Sbjct: 6 LTNDLILEVLSRLPLKSVARFHCVSKRWASMFGSPYFKELFLTR--SSAKPRLLFAI--- 60
Query: 64 IQNHLYTLHFSDHGSIETPT----------------RIHIPMISELAIVGSCNGLLCLWH 107
+QN ++ S + T RI+ +G +GL+ L+
Sbjct: 61 VQNGVWRFFSSPRLEKSSSTLVATAEFHMKLSPNNLRIYHDNTPRYFSIGYASGLIYLYG 120
Query: 108 SLYKDECYIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEV 167
Y+ I NP + YT LPK T ++ FGF I K+YK + ++Y
Sbjct: 121 DRYEATPLICNPNTGRYTILPKC---YTYRKAFSFFGFDPIDKQYKALSMIYPSGPGHS- 176
Query: 168 DNLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLR 227
++L+ G+G + W+ I R I SQ + ING L++L D
Sbjct: 177 ----------------KILTFGDGDMNWKKIKYRVLH-DIYSQG-ICINGVLYYLGDTSD 218
Query: 228 HQ------APRQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVV-------- 273
+ L+ FDLR E F I + C L+ +G L+ +
Sbjct: 219 WDNDHDVTSGNVLVCFDLRSESFTFI--------GLECGQLINYKGKLAVIFWDDVDDDD 270
Query: 274 ---RGYGQLGVWVMKEYGVQD------SWTKEFVIKSHLPL 305
++ VWV+++ ++ +WT++ + +S + +
Sbjct: 271 VKDDAIDEMHVWVLEDVEKKEWSKYAYTWTEDKLYRSQVSV 311
>AT2G27520.1 | Symbols: | F-box family protein |
chr2:11762061-11763104 FORWARD
Length = 347
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 119/307 (38%), Gaps = 52/307 (16%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
LP ++ ILSRL TSL ++ C+ W +L +DP F + + DL
Sbjct: 6 LPWDLVDEILSRLPATSLGRLRFTCKRWNALFKDPEFITKQFHKAAKQ---------DL- 55
Query: 64 IQNHLYTLHFSDHGSIETPTRI-HIPMISELAIVGSCNG-LLCLWHSLYKDECYIYNPFS 121
L S+ G T + IP E+A V CNG LLC K + + NP +
Sbjct: 56 ------VLMLSNFGVYSMSTNLKEIPNNIEIAQVFHCNGLLLCSTEEGNKTKLVVVNPCT 109
Query: 122 RHYTKLPKPEQFQTQKRVVLGFGFHEITK---EYKVVRIVYYKKEDEEVDNLQLRRYSLL 178
+ + + LG+G + K YK++RI Y K
Sbjct: 110 GQTRWIEPRTDYNYNHDIALGYGNNSTKKSYDSYKILRITYGCK---------------- 153
Query: 179 PESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQLISFD 238
V++ L + S WR + + V G +WL+ ++SFD
Sbjct: 154 ---LVEIFELKSNS--WRVLSKVHPNVEKHYYGGVSFKGNTYWLS-----YTKFNILSFD 203
Query: 239 LRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRG---YGQLGVWVMKEYGVQD--SW 293
E F+ +P P + L ++R ++R GQ+G+W+ + + SW
Sbjct: 204 FTTETFRSVPLPFLYQDGFVTLALSVVREEQLLLLRSRFDMGQVGIWMCNKIDTETVLSW 263
Query: 294 TKEFVIK 300
+K F ++
Sbjct: 264 SKSFTLE 270
>AT2G34280.1 | Symbols: | S locus F-box-related / SLF-related |
chr2:14470335-14471510 REVERSE
Length = 391
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 42/277 (15%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
MD LP ++ +IL RL + SL++ KSV + WRS + ++ NP ++L
Sbjct: 1 MDLLPYDVVEHILERLDVKSLLNCKSVSKQWRSTIRCRAFQERQLMHRRQSCNPDVLL-- 58
Query: 61 DLPIQNHLYTLHFSDHGSIET-------PTRIHIPMISELAIV--GSCNGLLCLWHSLYK 111
+ + + Y L H + T RI P L V SC+GL+CL+++
Sbjct: 59 -VSVADEFYLLK-RVHQVMRTLVLGSSVSVRILTPWEDTLYKVCQSSCDGLICLYNTYAS 116
Query: 112 DECYIYNPFSRHYTKLP-----KPEQFQTQKRVV----LGFGFHEITKEYKVVRIVYYKK 162
+ + NP +R + + P + ++++ Q V LGFG +I YK V + Y
Sbjct: 117 N--IVVNPTTRWHREFPLSTFQRLDRYEHQVGSVSWAKLGFGKDKINGTYKPVWL--YNS 172
Query: 163 EDEEVDNLQLRRYSLLPESEVQVLSLGNGSVT------------WRSIGNRSFQLGIQSQ 210
+ N Y ++ + ++ GN + + WR + S + Q
Sbjct: 173 AELGGLNDDDEDYDDEDKNNISMICQGNNNTSTFCEVFDFTTKAWRFVVPASPYRILPYQ 232
Query: 211 SQVLINGRLHWLTDQLRHQAPRQLISFDLRDEKFKEI 247
V ++G LHWLT+ ++SFDL E F+ +
Sbjct: 233 DPVYVDGSLHWLTE----GETTNVLSFDLHAETFQVV 265
>AT1G71320.1 | Symbols: | S locus F-box-related / SLF-related |
chr1:26882485-26883818 FORWARD
Length = 392
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 141/349 (40%), Gaps = 77/349 (22%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
+P +IA I L I SL K + + W S+ + + R+ RT P + + L
Sbjct: 14 IPDDIAEGIFHHLPIKSLARFKVLSKKWTSMIESTYFS---HKRLIRTGLPTPNMKF-LH 69
Query: 64 IQNHLYTLHFSDHGS------IETPTR--------IHIPMISELAIVGSCNGLLCLWHSL 109
I H +T +F + S +ET +R + ++GSC+GL+ L +
Sbjct: 70 ISQH-FTANFVEEYSNSITFLLETFSRDDQNNRKTFDESQNKTIQVLGSCDGLVLL--RI 126
Query: 110 YKD--ECYIYNPFSRHYTKLPKPEQFQ-----------------------------TQKR 138
+ D Y+ NP ++ + KL PE Q + KR
Sbjct: 127 HDDFRSIYLINPTTKEHMKL-SPEFMQWPFTLSYLTPAMANKPWRQLSQSVLDYDISVKR 185
Query: 139 V--VLGFGFHEITKEYKVVRI-VYYKKEDEEVDNLQLRRYSLLPESEVQVLSLGNGSVTW 195
+ + GFG + K YKVV I Y+ D E + +VLSL NG
Sbjct: 186 MPSLAGFGKDIVKKSYKVVLIYTRYEIHDHEF--------------KAKVLSLDNGEQ-- 229
Query: 196 RSIGNRSFQLGI--QSQSQVLINGRLHWLTDQLRHQAPRQLISFDLRDEKFKEIPSPN-D 252
R +G I Q+ V NG L WLT + Q QL++ DL E+F+ I P D
Sbjct: 230 RDVGFYDIHHCIFCDEQTSVYANGSLFWLTLKKLSQTSYQLLAIDLHTEEFRWILLPECD 289
Query: 253 RRFAIFCSHLVI-LRGCLSAVVRGYGQLGVWVMKEYGVQDSWTKEFVIK 300
++A + R CLS V+ L VW + + + W K + IK
Sbjct: 290 TKYATNIEMWNLNERLCLSDVLES-SNLVVWSLHQEYPTEKWEKIYSIK 337
>AT1G47340.1 | Symbols: | F-box family protein |
chr1:17354123-17356494 REVERSE
Length = 459
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 143/391 (36%), Gaps = 70/391 (17%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDL 62
SLP+E+ L IL RL S+ V + W S+ P L +R +A P L+ +
Sbjct: 36 SLPKELILEILKRLPAKSVKRFHCVSKQWASMLSCPHFRELFLTR-SSSAQPRLLFAIEK 94
Query: 63 PIQNHLYTL--------HFSDHGSIETPTRIHIPMISELAIV----------GSCNGLLC 104
Q L++L S + TP H+ + ++ G +GL+
Sbjct: 95 HNQWSLFSLPQRLTPYEKSSSSSVVVTP-EFHMKFPPDGMLIYPRHDRRFSFGYASGLMY 153
Query: 105 LWHSLYKDECY-----IYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVY 159
+ + Y I NP + Y LP E++ ++ FGF I K+YKV+ + Y
Sbjct: 154 FYGMWINEHDYDGVPVICNPLTGRYASLPFLERY---RKAFSFFGFDPIEKQYKVLFMAY 210
Query: 160 YKKEDEEVDNLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRL 219
D VL+ G G ++WR I S + I S + ING +
Sbjct: 211 PSGPDHHT-----------------VLTFGTGEMSWRKI-ECSVKHDIVSDG-ICINGVM 251
Query: 220 HWLTDQLRHQAPRQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGYGQL 279
++L D ++ FD+R E F I G V+ G+L
Sbjct: 252 YYLGDTSEFMTAFVVVCFDVRSETFS-----------------FIYPGSYCEVINYKGKL 294
Query: 280 GVWVMKEYGVQDSWTKEFVIKSHLPLKWLDEPYFNGSFNLSLSKARVLCSLRNGEILLEY 339
G+ +Y + +V++ ++W Y S ++ GEI+L
Sbjct: 295 GLVFCDDYTDDAIELRLWVLEDKEKIEWSKYAYKLKDEKFSAHYVSIVGVSAAGEIVLSM 354
Query: 340 KGRS------IVSYNPNFGTFKELSFQCLPE 364
+ + YNP T + Q E
Sbjct: 355 ADFTSKQPFYVFYYNPERNTLQCTEIQGFEE 385
>AT1G33530.1 | Symbols: | F-box family protein |
chr1:12159884-12161314 FORWARD
Length = 441
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 40/301 (13%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLI-LHYDL 62
LP + IL RL + L+ +KS+ + W+SL + LA H +++ I + +
Sbjct: 97 LPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYGLKEIKITVER 156
Query: 63 PIQNHLYTLHFSDHGSIETPTRIHIPMISELAIVGSCNGLLCLWHSLYKDECYIY--NPF 120
+ FS + I+ L + GSCNGL+C++ D YIY NP
Sbjct: 157 STSKSICIKFFSRRSGMNA---INSDSDDLLRVPGSCNGLVCVYE---LDSVYIYLLNPM 210
Query: 121 SRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYSLLPE 180
+ L P ++ +GFG +T YKV+ + + + V +L ++
Sbjct: 211 TGVTRTLTPPR----GTKLSVGFGIDVVTGTYKVMVLYGFDRVGTVVFDLDTNKWRQ--- 263
Query: 181 SEVQVLSLGNGSVTWRSIGNRSFQ-LGIQSQSQVLINGRLHWLTDQLRHQAPRQLISFDL 239
+++ G + ++ V +NG L WL +++ DL
Sbjct: 264 -------------RYKTAGPMPLSCIPTPERNPVFVNGSLFWLL----ASDFSEILVMDL 306
Query: 240 RDEKFKEIPSPNDRRFAIFCSHLVIL-----RGCLSAVVRGYGQLGVWVMKEYGVQDSWT 294
EKF+ + PND S + + R C+S V +G VWV+ + + + W
Sbjct: 307 HTEKFRTLSQPNDMDDVDVSSGYIYMWSLEDRLCVSNVRQGLHSY-VWVLVQDELSEKWE 365
Query: 295 K 295
+
Sbjct: 366 R 366
>AT3G57590.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), F-box associated type 3
(InterPro:IPR013187), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G57580.1); Has
891 Blast hits to 856 proteins in 41 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 889;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr3:21330182-21331396 REVERSE
Length = 404
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 135/322 (41%), Gaps = 61/322 (18%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
M+ +P ++ L I SRL S+I +++ + W S+ + P+ L +R + P L+
Sbjct: 1 MEPIPNDLILEIFSRLPAKSVIGFRTLSKHWASMLRSPVFTELFLTR--SSNRPRLLFAA 58
Query: 61 DLPIQNHLYTLHFSDHGSIETPTRIHIPMISELA------IVGSCNGLLC---LWHSLYK 111
+ +N + S H+ ++ + I +GLLC LW L K
Sbjct: 59 E---RNGEWLFFSSPQPQNRYEKSSHLDYHTKFSGDVSRFICSYVSGLLCFPDLW--LSK 113
Query: 112 DEC-YIYNPFSRHYTKLPKPEQFQTQKRVVLGF-GFHEITKEYKVVRIVYYKKEDEEVDN 169
D I NP + Y LP +++ + GF GF I K++KV+ Y + E
Sbjct: 114 DASPVICNPTTGMYESLPDLMRYKNAR----GFLGFDPIGKQFKVLSEAYPFSDQRE--- 166
Query: 170 LQLRRYSLLPESEVQVLSLGNGSVTWRS------IGNRSFQLGIQSQSQVLINGRLHWLT 223
++L+LG ++WRS +RS GI ING L++L
Sbjct: 167 ------------HHEILTLGTEELSWRSNIISCPAYDRSLSEGI------CINGVLYYLA 208
Query: 224 DQLRHQAPRQLISFDLRDEKFKEIPSP--NDRRFAIFCSHLVILRGCLSAVVRGYGQLG- 280
L + +I FD+R E+FK + ND+ LV G LS + YGQ G
Sbjct: 209 QTLGVPSC-VIICFDVRSEEFKYFDAGCFNDQLDDTSGLILVNYEGKLSGINWKYGQAGE 267
Query: 281 -------VWVMKEYGVQDSWTK 295
+WV+++ + W K
Sbjct: 268 RRTVELRMWVLED-AEKHEWVK 288
>AT4G38870.1 | Symbols: | F-box family protein |
chr4:18132583-18133863 REVERSE
Length = 426
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 42/311 (13%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
LP ++ + IL +L++ LI V + W S+ +DP L + + + +
Sbjct: 53 LPVDLIMEILKKLSLKPLIRFLCVSKLWASIIRDPYFMKLFLNESLKRPKSLVFVFRAQS 112
Query: 64 IQNHLYTLHFSDHGSIETPTRI--------HIPMISE--LAIVGSCNGLLCLWHSLYKDE 113
+ + ++H I + + H+ ++ + I S +GL+C
Sbjct: 113 LGSIFSSVHLKSTREISSSSSSSSASSITYHVTCYTQQRMTISPSVHGLICYGPP---SS 169
Query: 114 CYIYNPFSRHYTKLPKPEQFQTQKRVVLGF-GFHEITKEYKVVRIVYYKKEDEEVDNLQL 172
IYNP +R LPK + +R + + G+ + YKVV I L
Sbjct: 170 LVIYNPCTRRSITLPK---IKAGRRAINQYIGYDPLDGNYKVVCITR--------GMPML 218
Query: 173 RRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHW---LTDQLRHQ 229
R L E E+QVL+LG +WR I + S+ ++ ING L++ + +L
Sbjct: 219 RNRRGLAE-EIQVLTLGTRDSSWRMIHDIIPPHSPVSE-ELCINGVLYYRAFIGTKLNES 276
Query: 230 APRQLISFDLRDEKFKEIPSP-NDRRFAIFCSHLVILRGCLSAVV---RGYGQLGVWVMK 285
A ++SFD+R EKF I P N R F S L G L+ + + G +G+W+++
Sbjct: 277 A---IMSFDVRSEKFDLIKVPCNFRSF----SKLAKYEGKLAVIFYEKKTSGIIGLWILE 329
Query: 286 EYGVQDSWTKE 296
+ W+K+
Sbjct: 330 D-ASNGEWSKK 339
>AT1G50870.1 | Symbols: | F-box family protein |
chr1:18855147-18856337 FORWARD
Length = 396
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 42/296 (14%)
Query: 5 PREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLPI 64
P ++ L IL RL + S++ + V + W S DP + +R + P L++ +
Sbjct: 32 PLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEAR--SSTRPSLLMFFKNKD 89
Query: 65 QNHLYTLHFSDHGSIETPT--------RIHIPMISELAIVGSCNGLLCLWHSLYKDECYI 116
+ ++T + S ET + I P S +GL+ S + I
Sbjct: 90 KLFVFTFPHHNQNSKETHSYSQHVDSYHIKYPKYCCFPFTESVHGLISFRIS---TKPII 146
Query: 117 YNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYS 176
+NP R + LPKPE ++ K + + G+ + ++K++ + D D
Sbjct: 147 WNPTMRQFLILPKPE--KSWKGLSVFLGYDPVEGKHKLMCM----NRDNTSD-------- 192
Query: 177 LLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLT--DQLRHQAPRQL 234
E +VL+LG+ WR I + I ING +++ DQ+ + +
Sbjct: 193 -----ECRVLTLGSAQEKWRRIKSNLKHRSILRYYGQCINGVIYYQAYIDQMGFISNPTI 247
Query: 235 ISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGY----GQLGVWVMKE 286
+SF++R EKF I P+ F + L+ +G L+ V G + +W +++
Sbjct: 248 MSFEVRSEKFDTITLPS----GSFANMLIPYQGRLACVNNTMDDVNGGITLWTLED 299
>AT3G49450.1 | Symbols: | F-box family protein |
chr3:18337305-18338498 REVERSE
Length = 397
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 124/305 (40%), Gaps = 54/305 (17%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDL 62
+LP ++ + ILSR+ S + V W SL + P L L R +A P L++ +
Sbjct: 31 TLPTDLMVEILSRVPAKSAARFRCVSNDWNSLLRSPYLTNLFLKR--SSARPHLLITFQA 88
Query: 63 PIQNHLYT---LHFSDHGS--IETPTRIHIPMISELAIVGSCNGLLCL---WHSLYKDEC 114
+ ++ SD S + + +P + GL+C W K +
Sbjct: 89 EGKWSFFSSPEYLISDQNSNLVVVDNHMDVPKDYSFGVCVPVCGLMCTSNEWVLSRKRDA 148
Query: 115 --YIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQL 172
I NP + + LPK + V+ G++ I K+YKV+ + +K +
Sbjct: 149 RMMICNPSTGQFKSLPKVR--SCRGNVITYIGYNPIEKQYKVLCMTIREKPFK------- 199
Query: 173 RRYSLLPESEVQVLSLGNGSVTWR----SIGNRSFQLGIQSQSQVLINGRLHWLTDQLRH 228
E QVL+LG G + WR S+ + + G + ING L +L ++
Sbjct: 200 -----FKAEEHQVLTLGTGKLKWRMLECSVDHYPYYHG-----SICINGVLFYLA--MKS 247
Query: 229 QAPRQL-ISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGYGQLGVWVMKEY 287
++ + +SF ++DE F IP+ + LS ++ G+LG K +
Sbjct: 248 ESKEYMTVSFHMKDENFMFIPNQD----------------LLSTLINYKGRLGGIRHKSF 291
Query: 288 GVQDS 292
G D
Sbjct: 292 GFMDG 296
>AT1G47790.1 | Symbols: | F-box family protein |
chr1:17600004-17601173 REVERSE
Length = 389
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 130/310 (41%), Gaps = 41/310 (13%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILH--- 59
S P ++A IL RL + S++ + V + W S+ DP + ++ +
Sbjct: 24 SFPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLLFCFKQSD 83
Query: 60 --YDLPIQNHLYTLHFSDHGSIETPTRIHIPMISELAI---VGSCNGLLCLWHSLYKDEC 114
+ I H Y + S +I+ R + + E + S +GL+C H L
Sbjct: 84 KLFVFSIPKHHYDSNSSSQAAID---RFQVKLPQEFSYPSPTESVHGLICF-HVL--ATV 137
Query: 115 YIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRR 174
++NP R + LPKP ++ K + + G+ I ++KVV + + D
Sbjct: 138 IVWNPSMRQFLTLPKPR--KSWKELTVFLGYDPIEGKHKVVCLPRNRTCD---------- 185
Query: 175 YSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQL 234
E QVL+LG+ +WR++ + I G ++++ + H +
Sbjct: 186 -------ECQVLTLGSAQKSWRTVKTKHKHRSTNDTWGRCIKGVVYYIA-YVYHTRVWCI 237
Query: 235 ISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGY----GQLGVWVMKEYGVQ 290
+SF ++ EKF I P + I+ ++ G L+ V + Y + +W++++
Sbjct: 238 MSFHVKSEKFDMIKLPLEN---IYRDVMINYEGRLACVDKLYTLNNDGIRLWILEDAEKH 294
Query: 291 DSWTKEFVIK 300
+K+F+ +
Sbjct: 295 KWSSKQFLAR 304
>AT5G42430.1 | Symbols: | F-box family protein |
chr5:16971312-16972499 REVERSE
Length = 395
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 42/308 (13%)
Query: 2 DSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYD 61
DS+P ++ L ILSRL S+ V + W S+ P L + +A P L+ +
Sbjct: 8 DSIPIDLILEILSRLPAKSITRFHCVSKLWGSMLCRPYFNELFLTI--SSARPRLLFAF- 64
Query: 62 LPIQNHLYTLHFSD--------HGSIETPTRIHIPMISELAIVGSCNGLLCLWHSLYKDE 113
H FS S H L I +GL+
Sbjct: 65 ---SKHGEWRFFSSPQPQNPYGKSSFVATADFHTKFSQNLNICNYTSGLVYFSAMWITKA 121
Query: 114 CYIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLR 173
I NP + HY LPK + R F F + K++KV+ + +++N + +
Sbjct: 122 DVICNPSTGHYAMLPKLLLTYGETRSF--FLFDPVGKQFKVLLM-------NKINNNETK 172
Query: 174 RYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQ 233
++ +L+LG V WR I + I S + ING L+++ +
Sbjct: 173 --------DIHILTLGTRKVRWRKIQQCPL-IHIVSHEWICINGALYYIAYNI-DDFLGY 222
Query: 234 LISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGYGQLG-------VWVMKE 286
++ FD+R EKFK + + N F+ + L+ +G L V Y G +WV+++
Sbjct: 223 IVCFDVRSEKFKCL-NLNQDCFSERSTKLIYYKGKLGVVNLKYAHGGGFPLKLCMWVLED 281
Query: 287 YGVQDSWT 294
Q+ WT
Sbjct: 282 VEKQE-WT 288
>AT1G13200.1 | Symbols: | F-box family protein |
chr1:4507221-4508528 REVERSE
Length = 435
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 164/408 (40%), Gaps = 53/408 (12%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRT--ANPCLIL-- 58
SLP ++ I R + +LI +KS+ + WRS + H + + +P ++L
Sbjct: 42 SLPNDVLEEIFLRFPVKALIRLKSLSKQWRSTIESRSFEERHLTIAKKAFVDHPKVMLVG 101
Query: 59 ----------HYDLPIQNHLYTLHFSDHGSIETPTRIHIP--MISELAIVGSCNGLLCLW 106
D I L+ L + S+ + TR++ P + + I SC+GL C+
Sbjct: 102 EEDPIRGTGIRPDTDIGFRLFCL---ESASLLSFTRLNFPQGFFNWIYISESCDGLFCI- 157
Query: 107 HSLYKDECYIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVV-----RIVYYK 161
HS Y+ NP +R LP P FQ +L F+ +E+ VV + + K
Sbjct: 158 HSPKSHSVYVVNPATRWLRLLP-PAGFQ-----ILIHKFNPTEREWNVVMKSIFHLAFVK 211
Query: 162 KEDEEVDNL-QLRRYSLLPES------EVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVL 214
D ++ L +Y + S + ++ + WR + Q
Sbjct: 212 ATDYKLVWLYNCDKYIVDASSPNVGVTKCEIFDFRKNA--WRYLACTPSHQIFYYQKPAS 269
Query: 215 INGRLHWLTDQLRHQAPRQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVIL----RGCLS 270
NG ++W T+ + ++++FD++ E F+ +P N H+ + C+S
Sbjct: 270 ANGSVYWFTEPYNERI--EVVAFDIQTETFRLLPKINPAIAGSDPHHIDMCTLDNSLCMS 327
Query: 271 AVVRGYGQLGVWVMKEYGVQDSWTKEFVIK--SHLPLKWLDEPYFNGSFNLSLSKARVLC 328
+ +W +K +D+W K F I S + F+ S + A +
Sbjct: 328 KREKDTMIQDIWRLKP--SEDTWEKIFSIDLVSCPSSRTEKRDQFDWSKKDRVEPATPVA 385
Query: 329 SLRNGEILLEYK-GRSIVSYNPNFGTFKELSFQCLPECFNVVVHMGSL 375
+N +ILL ++ R +V Y+P + F P + V++ SL
Sbjct: 386 VCKNKKILLSHRYSRGLVKYDPLTKSID--FFSGHPTAYRKVIYFQSL 431
>AT1G09650.1 | Symbols: | F-box family protein |
chr1:3125978-3127126 FORWARD
Length = 382
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 26/276 (9%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
M+SLP E+ IL RL L+ K+V + W+S + P F++ ++ NP +++
Sbjct: 10 MESLPHEVVECILERLDADPLLRFKAVSKQWKSTIESPFFQRRQFTQRQQSGNPDVLMVS 69
Query: 61 DLPIQNH----LYTLHFSDHGSIETPT--RIHIPMISELAIV-GSCNGLLCLWHSLYKDE 113
N L TL S++ PT E ++ SC+GL+CL+
Sbjct: 70 RCADINSEIEALTTLVLGSSSSVKIPTPWEEEEEEDKEYSVSQDSCDGLVCLFDKFKSG- 128
Query: 114 CYIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKE----DEEVDN 169
+++NP +R Y LP Q + +G GF+++ Y+V R+ + K + + V
Sbjct: 129 -FVFNPATRWYHPLPL--CQLQQLLIAIGDGFYDLG--YRVSRLGFGKDKLTGTYKPVWL 183
Query: 170 LQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQ 229
L + +V + WR + + + + V ++G LHW T+
Sbjct: 184 YNSIEIGLENATTCEVFDFSTNA--WRYVSPAAPYRIVGCPAPVCVDGSLHWFTE----C 237
Query: 230 APRQLISFDLRDEKFKEI---PSPNDRRFAIFCSHL 262
+++SFDL E F+ + P N F I +L
Sbjct: 238 EETKILSFDLHTETFQVVSKAPFANVDGFDIVMCNL 273
>AT4G10190.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G21130.1); Has
950 Blast hits to 926 proteins in 40 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 948;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr4:6350928-6352031 FORWARD
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 37/262 (14%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDL 62
LP ++ + IL+R+ +L+ ++S + W L +D A HF+ R + +++ + +
Sbjct: 8 DLPEDLVMEILARVPTVTLVRLQSTSKRWNVLIEDKRFAEQHFTNAPRHSLLIMLMTFRV 67
Query: 63 -PIQNHLYTLHFSDHGSIETPTRIHIPMISELAIVGSCNGLLC---LWHSLYKDECYIYN 118
+ L+T+H ++ +I + R+ P+ + L V CN C L + + + N
Sbjct: 68 YLVSVDLHTIH-NNKVNIISQLRLKDPLSNFLEEVDICNVFHCDGFLLCTTVDNRLVVSN 126
Query: 119 PFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYSLL 178
P SR TK +P F +K + G K YK++R+ + + E N ++ +
Sbjct: 127 PCSRD-TKWIQPRNFY-KKFDIFALGKSSCNK-YKIMRMDQFYPDRPEFMNYEIYDF--- 180
Query: 179 PESEVQVLSLGNGSVTWRSIGN-------RSFQLGIQSQSQVLINGRLHWLTDQLRHQAP 231
S +WR +G R G+ +NG +WL +
Sbjct: 181 ------------NSNSWRVVGKITDWFIPRCMDRGMS------VNGNTYWLASTNKDLTS 222
Query: 232 RQ-LISFDLRDEKFKEIPSPND 252
L+ FD E+F + P D
Sbjct: 223 SSFLLGFDFSTERFVRVSLPGD 244
>AT5G18160.1 | Symbols: | F-box family protein |
chr5:6002770-6003909 FORWARD
Length = 379
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 55/307 (17%)
Query: 2 DSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLIL--- 58
+S+P +I + ILSRL S++ +SV + W S+ P R +T+ PC++L
Sbjct: 32 NSIPLDITIEILSRLPAKSIVRSRSVSKLWSSITTTPEFIK---HRSKKTSPPCVLLIFR 88
Query: 59 ------HYDLPIQNHLYTLHFSDHGSIETPTRIHIPMISELAIVGSCNGLLCLWHSLYKD 112
+ P + Y+ H D+ I IP + + S +GL+CL S
Sbjct: 89 KHDKLIVFSSPQHQNTYS-HVQDY-------HIEIPKNGFIRRLDSVHGLICLEGS---K 137
Query: 113 ECYIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQL 172
+ I NP + + LP+P+ + V G+ I +YK + IV + + +V L++
Sbjct: 138 QLVICNPTLKRFFPLPEPQGTGDEYNVGGFLGYEPIEGKYKALCIV--RGWNTQVLTLEI 195
Query: 173 RRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPR 232
+ +WR + + + ING +++ + + PR
Sbjct: 196 QE-------------------SWR-VTKPGYTHWPTKDTGRCINGVIYYKA-IIFDRVPR 234
Query: 233 QLI-SFDLRDEKFK--EIPSPNDRRFAIFCSHLVILRGCLSAVVRGYGQLGVWVMKEYGV 289
+I FDLR E+F E P N RF +V G L+ + + +W +++ G
Sbjct: 235 HVIFGFDLRYEEFTHIEFPMRNYDRFL-----MVSYEGRLALISSTSSVVEIWSLEDAG- 288
Query: 290 QDSWTKE 296
W+ E
Sbjct: 289 NRKWSYE 295
>AT4G21240.1 | Symbols: | F-box family protein |
chr4:11322411-11323664 FORWARD
Length = 417
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 126/315 (40%), Gaps = 51/315 (16%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDP-LLAPLHFSRMDRTANPCLILHYDL 62
+P ++ +IL RL S + + V + W S+ P + F R CL+
Sbjct: 36 IPLDMIPDILLRLPAKSAVRFRIVSKLWLSITTRPYFIRSFAFPSSTRL---CLMACVKA 92
Query: 63 PIQNHLYTLHFSDHGS--------IETPTRIHIPMISELAIVGSCNGLLCLWHSLYKDEC 114
+LH D GS I++P + SE S NGL+C + Y
Sbjct: 93 RDMRLFISLHQHDDGSYAHVDRCEIKSPKHDYYNPSSE-----SVNGLVC-FGDFYN--I 144
Query: 115 YIYNPFSRHYTKLPKPEQFQTQKRVVLG-FGFHEITKEYKVVRIVYYKKEDEEVDNLQLR 173
++NP R + LP+P+ T + + G+ + +YKV+ I Y + +
Sbjct: 145 VVWNPSMRQHVTLPEPKPHSTVRYFIRSCLGYDPVEDKYKVLSISGYHNGNHDP------ 198
Query: 174 RYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQ---SQSQVLINGRLHWLTDQLRHQA 230
V +LG +WR I N + + S+ ING +++ Q+R +
Sbjct: 199 ----------LVFTLGPQE-SWRVIQNSPLDIPLPTGGSRVGTCINGHVYYEA-QIRFKV 246
Query: 231 P------RQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGYGQLGVWVM 284
L+SFD+R EKF I P D F ++ +G L+ Y + WV+
Sbjct: 247 DDIFNFENILMSFDVRYEKFNTIKKPADPTLRNF---MLNYQGKLAWFCSDYSSIRFWVL 303
Query: 285 KEYGVQDSWTKEFVI 299
+ Q+ K F++
Sbjct: 304 DDGDKQEWSLKNFIL 318
>AT3G20690.1 | Symbols: | F-box protein-related |
chr3:7231570-7232682 REVERSE
Length = 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 141/335 (42%), Gaps = 50/335 (14%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
M LP ++ ILSRL + SL ++S C++W L++ A H + + LI+
Sbjct: 3 MSDLPHDLVEEILSRLPLISLKAMRSTCKTWNVLSKHRSFANKHIGNVTASGKRDLIMIK 62
Query: 61 DLPIQNHLYTLHFSDHG----------SIETPTRIHIP----MISELAIVGSCNGLLCLW 106
D + Y++ + HG SI+ +H+ + E+ V CNGLL L+
Sbjct: 63 DCKV----YSIGVNLHGIQNNNNIIDLSIKNKGILHLENLDLIFKEIFNVFHCNGLLLLY 118
Query: 107 HSLYKDEC--YIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKED 164
S+ D + NP+ + + F + + L FG+ + +K++R+ D
Sbjct: 119 GSITDDSIRLVVCNPYWGKREWVKRINNFASFDK--LAFGYDKSCGCHKILRVF-----D 171
Query: 165 EEVDNLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTD 224
+ L++ Y+L S + + + + W + +F Q V + G +W
Sbjct: 172 SYPNRLEI--YNLRSNSRM----VSSFPLKW----DIAFM-----QDGVSLKGNTYWYAK 216
Query: 225 QLRHQAPRQLISFDLRDEKFK-EIPSPNDRRFAIFCSHLVILRGCLSAVVR----GYGQL 279
R + LI FD E+F +P P S V+ L+ +V+ G ++
Sbjct: 217 DRRSEDC-YLICFDFTRERFGPRLPLPQPFIDEFLGSLYVVREEKLAVLVKRWRGGKSEI 275
Query: 280 GVWVMKEYGVQD-SWTKEFVIKSHLPLKWLDEPYF 313
+WV + + SW+K F+ + P +L E Y
Sbjct: 276 DIWVTNKIEPDEVSWSK-FLKVDNTPRFFLTEGYL 309
>AT5G15660.1 | Symbols: | F-box family protein |
chr5:5095652-5097041 FORWARD
Length = 438
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 154/375 (41%), Gaps = 49/375 (13%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
D +P ++ + IL RL + S+ +V + W + + P + R ++ P ++
Sbjct: 25 FDEIPHDLVIEILERLPLKSVARFLTVSKLWATTIRSPDFRKSY--RGGSSSEPRTLIVS 82
Query: 61 DLPIQNHLYTLHF--SDHGSIETPTRIHIPMI---SELAIVGSCNGLLCLWHSLYKDECY 115
DL + LHF S + + P E NGL+ + Y +
Sbjct: 83 DLNFKEPNPKLHFFRPSISSPSFLSSLTCPFTYPRHEEYYYHHVNGLISVG---YGTDQI 139
Query: 116 IYNPFSRHYTKLPKPEQFQTQKRVVLGF-GFHEITKEYKVVRIVYYKKEDEEVDNLQLRR 174
+ NP + + LP+P +T++++V+ F G+ ++ +YKV+ + +LR
Sbjct: 140 VINPTTGKFITLPRP---KTRRKLVISFFGYDSVSDQYKVLCMT-----------ERLRG 185
Query: 175 YSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQL 234
+ S+ QV +LG +W+ I N S S + V ING ++++ R L
Sbjct: 186 HPEEASSQHQVYTLGAKQKSWKMI-NCSIPHRPWSWNAVCINGVVYYIAKTGEGMFRRCL 244
Query: 235 ISFDLRDEKFKEIPS-PNDRRFAIFCSHLVILRGCLSAVVR-GYGQLGVWVMKEYGVQDS 292
+ FDL+ + P + + ++ L+ +G ++ + + VWVM + G +
Sbjct: 245 MRFDLKSDNLDLCTILPEEIQTSLHDYFLINYKGKVAIPNQPNFYTYDVWVMNQEGGKIE 304
Query: 293 WTKE--FVIKSHLPLKWLDEPYFNGSFNLSLSKARVLCSLRNGEILLEYKGRS----IVS 346
W K F IK P K F V + GE +L + +
Sbjct: 305 WLKNITFTIK---PRKGFVRYLF------------VTGTTHTGEFILAPTSYTDEFYVFH 349
Query: 347 YNPNFGTFKELSFQC 361
YNP+ +F+++ Q
Sbjct: 350 YNPDMNSFRKIRVQA 364
>AT1G32600.1 | Symbols: | F-box family protein-related |
chr1:11794802-11795683 FORWARD
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 123/304 (40%), Gaps = 47/304 (15%)
Query: 65 QNHLYTLHFSDHGSIETPTRIHIPMISELAIVGSCNGLLCLWHSLYKDECYIYNPFSRHY 124
++ LY L ++ S++ +P +E + SC G++CL +E I+ P S +
Sbjct: 14 KDGLYLLDLNETTSLKLNVPFTLPAQTEPVCILSCRGVICLTRK-DNNELAIWKPTSTKF 72
Query: 125 TKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYSLLPESEVQ 184
++P ++ QTQ +LGFG+ + +YK+V I+ K R L+P S+
Sbjct: 73 KRVPMIKRGQTQN--LLGFGYDRVLDDYKIVTIIDKKTYIFTFKESSWRESKLIPSSDC- 129
Query: 185 VLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQLISFDLRDEKF 244
+ ++ +++ ++W+ + R + ++ FD +E++
Sbjct: 130 ---------------------FFKERTGTVVDNCMYWIAN--RFNKEKFILCFDFVNEEY 166
Query: 245 KEIPSPNDRRFAIFCSHLVILRGCLSAVVRGYGQLGVWVMKEYGVQDSW--TKEFVIKSH 302
++ P F S L + RG L V+ Y V D+ + +
Sbjct: 167 SKLNVPMMLSGLEFNSWLDVSRGEL-CVINHYP----------SVDDNLCVCRREIRSGK 215
Query: 303 LPLKWLDEPYFNGSFNLSLS-KARVLCSLRNGEILLEYKGRS------IVSYNPNFGTFK 355
+W +P+ N + N R +C +N E+ + + RS + YN F
Sbjct: 216 KIARWDSDPWMNVAGNDDEPVDIRFVCIAKNDEVFVVVRCRSKEEEDNVFVYNKEQNEFI 275
Query: 356 ELSF 359
E+ F
Sbjct: 276 EVLF 279
>AT1G30920.1 | Symbols: | F-box family protein |
chr1:11004242-11005444 REVERSE
Length = 400
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 156/393 (39%), Gaps = 91/393 (23%)
Query: 2 DSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLIL--- 58
DS+P ++ L+ILSRL S+ + V + W S+ + L +R ++ P L++
Sbjct: 8 DSIPIDLILDILSRLPSKSIARCRCVSKLWESMIRQSYFTELFLTR--SSSRPHLLIAVE 65
Query: 59 ------HYDLP------------IQNHLYTLHFSD----HGSIETPTRIHIPMISELAIV 96
+ LP + +L+ F D HG + I+ P ++
Sbjct: 66 QEGEWKFFSLPQPKNYLGKSSLVVAANLHLKFFEDKRPQHGCSYASSLIYFPNMTIRKKG 125
Query: 97 GSCNGLLCLWHSLYKDECYIYNPFSRHYTKLPKPEQFQTQKRVVLG--FGFHEITKEYKV 154
G++C NP + Y + P K V G GF I K++KV
Sbjct: 126 DDHLGVIC-------------NPSTGQYGYVILPPLLDF-KSVPYGKFLGFDPIDKQFKV 171
Query: 155 VRIVYYKKEDEEVDNLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVL 214
+ ++ + D Q ++ +L+LG +V WR I + S +
Sbjct: 172 LIPIF------DFDKHQ---------TDHHILTLGAETVGWRKI-QSPLRYLPHSNGTIC 215
Query: 215 INGRLHWLTDQLRHQAPRQLISFDLRDEKFKEIPSPNDRRFAIFCS--HLVILRGCLSAV 272
ING L++L L+ FD+R E F + R +CS LV +G L +
Sbjct: 216 INGILYYLAKINYAMDKNVLVCFDVRSENFVFL------RLNTYCSSTKLVNYKGKLGMI 269
Query: 273 VRGYG-------QLGVWVMKEYGVQDSWTKEFVIKSHLPLKWLDEPYFNGSFNLSLSKAR 325
+ Y +L VWV+++ G ++ T + ++ D +NLS
Sbjct: 270 NQEYVDDGGFPLKLSVWVLEDVGKEEWSTYVYTLRD-------DNKVDQVKYNLS----- 317
Query: 326 VLCSLRNGEILLEYKGRS-----IVSYNPNFGT 353
V+ +GEI+L K ++ ++ +NP+ T
Sbjct: 318 VVGVTASGEIVLVKKTQTLKPFYVLYFNPDKNT 350
>AT1G32420.1 | Symbols: | F-box family protein |
chr1:11701995-11702903 FORWARD
Length = 302
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 116/293 (39%), Gaps = 41/293 (13%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPC----LIL 58
++P ++ + IL +L SL+ + V + W S+ T P LI
Sbjct: 36 NIPLDLTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQPPPRDIKLIF 95
Query: 59 HYDLPIQNHLYT-LHFSDHGSIETPTRIHIPMISELAIVGSCNGLLCLWHSLYKDECYIY 117
H+ + LY HF S + + + GL+C W S IY
Sbjct: 96 HHQV-----LYPGPHFFIFSSTYPQNTDKESLTTRASSYHYVRGLICCW-SHCPTTVDIY 149
Query: 118 NPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYSL 177
NP +R Y +P ++Q + FG+ + +YKV+ + Y E
Sbjct: 150 NPTTRQYYTVPDTNRYQYIETCF--FGYDPVENQYKVMVLPKYYME-------------- 193
Query: 178 LPESEVQVLSLGNG-SVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQLIS 236
ES QV ++G+ WR I ++ V ING +++ + + L+S
Sbjct: 194 --ESPCQVFTVGDPIEKPWRDIQGIGVHFLLKDA--VCINGVIYYQATN-EYGSTYFLVS 248
Query: 237 FDLRDEKFKEIPSPNDRRFAIFCSH---LVILRGCLSAVVRGYGQLGVWVMKE 286
FD+R EKF + +P I H L+ +G L ++ L +WVM++
Sbjct: 249 FDVRSEKFNHVKAPK-----ILTDHPCTLINYQGKLGLIMCCKKGLEIWVMED 296
>AT4G19930.1 | Symbols: | F-box family protein |
chr4:10803558-10804853 FORWARD
Length = 431
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 142/323 (43%), Gaps = 46/323 (14%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
M +P ++ + IL+RL SL+ KSV + W SL + + +R+ R + L+
Sbjct: 40 MPYIPFDLVIEILTRLPAKSLMRFKSVSKLWSSL----ICSRTFTNRLLRVPSFIQRLYV 95
Query: 61 DLP-IQNHLYTL------------HFSDHGSIETPTRIHIPMISELAIVGSCNGLLCLWH 107
L + N L S S + P + + GL+C
Sbjct: 96 TLTFLDNSLQRKSKLLSSSSSPGSDISTMSSFVVDRDLTTPSMKGYYLSHVLRGLMCF-- 153
Query: 108 SLYKDECYIYNPFSRHYTKLPKPEQFQ------TQKRVVLGFGFHEITKEYKVVRIVYYK 161
+ + IYN +R LP E+ K+++ G + +YKVV IV
Sbjct: 154 -VKEPSVKIYNTTTRQLVVLPDIEESNIIAEDHKNKKIMYRIGHDPVGDQYKVVCIV--A 210
Query: 162 KEDEEVDNLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVL-INGRLH 220
+ ++E +LRRY L E V +L G+ S WR I S L I +Q+L INGR+H
Sbjct: 211 RPNDEFG--ELRRY--LSEHWVFILG-GDKSSGWRKIPCPSPHLPI---TQILSINGRMH 262
Query: 221 WLTDQLRHQAPRQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAV----VRGY 276
+L + L++FD E+ + +P D R+ F S+ + G ++ + ++
Sbjct: 263 YLA--WVQKFDPMLVTFDFSSEEISILQAPEDIRW--FKSNPIEYYGKVALLNLSDLKRE 318
Query: 277 GQLGVWVMKEYGVQDSWTKEFVI 299
+ +WVM++ ++ W+++ ++
Sbjct: 319 CTMNLWVMEDVE-KNMWSEKTLV 340
>AT3G47030.1 | Symbols: | F-box family protein |
chr3:17322171-17323415 FORWARD
Length = 414
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 65/301 (21%)
Query: 2 DSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCL--ILH 59
+ +P ++ +++ SRL+I + + + R W S+ + L F +M T L L+
Sbjct: 32 EEIPDDLLIDVFSRLSIEDVARCRCLSRFWSSILRRRYFTEL-FHKMSSTRPRILFTFLY 90
Query: 60 Y----------DLPIQNHLYTL-HFS-DHGSIETPTRIHIPMI--SELAIVGSCNGLLCL 105
Y DL NH L +FS + I ++H P + + + GL+C
Sbjct: 91 YGKRLFYSMPQDLDPSNHYSPLPYFSISYSPISAHYQMHFPKVLGASAKVCPPILGLICC 150
Query: 106 WHSLYKDECYIYNPFSRHYTKLPKPEQFQTQKRVVL---GFGFHEITKEYKVVRIVYYKK 162
S + I+NP +R + + T KRV + FG+ I K +KV+
Sbjct: 151 KSS----KTMIFNPSTR------ESKFISTTKRVGVKSTSFGYDPIDKLFKVL------- 193
Query: 163 EDEEVDNLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWL 222
S+ + +V +LG VTWR++ + S++ ++G L++L
Sbjct: 194 -------------SMSDDFVCRVSTLGTEVVTWRTVECSVPHHPL--HSEICMDGVLYYL 238
Query: 223 TDQLRHQAPR--QLISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGYGQLG 280
++ + P+ + +F++R E+FK +P + C H+ GC SAV+ G+L
Sbjct: 239 ARRVGDETPKPYMVAAFEVRLERFKFLP------MDLRCKHI----GC-SAVIDYKGKLA 287
Query: 281 V 281
V
Sbjct: 288 V 288
>AT3G17540.1 | Symbols: | F-box family protein |
chr3:6002783-6003973 FORWARD
Length = 396
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 115/261 (44%), Gaps = 36/261 (13%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
+ LP EI ILSR+ SL + + C+ W +L +DP +F + +R L+LH
Sbjct: 7 ISDLPHEIESEILSRVPTKSLAKLHTTCKRWYALFRDPRFVKKNFGKSERR----LMLHS 62
Query: 61 DL---PIQNHLYTLHFSDHGSIETPTRIHIPMISE---LAIVGSCNGLLCLWHSLYKDEC 114
+ I + L+ + S S+E +++ ISE + + C+GL+ L +
Sbjct: 63 NFGVYKITDDLHGILNSGDPSLEFTSKLSNLKISEDLTITKIFHCDGLI-LCSTKENTRL 121
Query: 115 YIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEIT-KEYKVVR-IVYYKKEDEEVDNLQL 172
++NP + + +++++ LG+ + + YK++R YY +D V ++
Sbjct: 122 VVWNPCTGQTRWIKPSKRYRSDDSYCLGYVNSKSSYHNYKILRYCFYYNDQDACVSEFEI 181
Query: 173 RRYSLLPESEVQVLSLGNGSVTWRSIGN---RSFQLGIQSQSQVLINGRLHWLTDQLRHQ 229
+S S +WR + + R + L S + G +++ + +
Sbjct: 182 YDFS---------------SESWRVLDDYCTREWGLFCHGMS---LKGNTYFVAGE--KE 221
Query: 230 APRQLISFDLRDEKFKEIPSP 250
++ FD + E+F+ +P P
Sbjct: 222 TGFFMLYFDFKTERFERLPLP 242
>AT3G17480.1 | Symbols: | F-box family protein |
chr3:5983199-5984320 FORWARD
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 40/259 (15%)
Query: 1 MDSLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHY 60
M L ++ +ILSR+ TSL+ ++S C+ W ++ D HF ++ L+
Sbjct: 8 MSVLTEDLVEDILSRVPATSLVRLRSTCKQWNAILNDRRFIKKHFDTAEKEYLDMLLRSL 67
Query: 61 DL-PIQNHLYTLHFSDHGSIETPTRIHIPMI------SELAIVGSCNGLLCLWHSLYKDE 113
+ + +L+ LH + SIE +++ + E V CNGLL ++
Sbjct: 68 RVSSMSVNLHGLHDNIDPSIELKRELNLKGLLCNSGKVESFEVFHCNGLLLFTNT---ST 124
Query: 114 CYIYNPFSRHYTKLPKPEQFQTQ-KRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQL 172
++NP + TK + E T+ + LG+ + ++YK++R + ++ N +L
Sbjct: 125 IVVWNPCTGQ-TKWIQTESANTRYHKYALGYENKNLCRDYKILRFL------DDGTNFEL 177
Query: 173 RRYSLLPESEVQVLSLGNGSVTWRSIGNR--SFQLGIQSQSQVLINGRLHWLTDQLRHQA 230
Y S +WR + + F+L I SQ + + G +W+ H+
Sbjct: 178 EIYEF-------------NSSSWRVLDSVEIDFELDIGSQG-MSVKGNTYWIVID-DHEV 222
Query: 231 PRQLI-----SFDLRDEKF 244
+L+ SFD E+F
Sbjct: 223 DGELVNCFLTSFDFTRERF 241
>AT3G17710.1 | Symbols: | F-box family protein |
chr3:6055597-6056703 FORWARD
Length = 368
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 97/247 (39%), Gaps = 27/247 (10%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
LP ++ ILSRL SL+ ++VC+ W L D H R A P I L
Sbjct: 6 LPWDLEEEILSRLPPRSLVRFRTVCKHWNGLFSDKRFVKKHLVR----ARPQFIF---LT 58
Query: 64 IQNHLYTLHFSDHGSI---ETPTRIHI-PMISELAIVGSCNGLLCLWHSLYKDECYIYNP 119
+Y++ G+I E P H PM + +C+GL L+ +K ++NP
Sbjct: 59 ESKKMYSIEIDLGGTIEVREVPYDFHCQPMKKNFTTIMACDGL--LFRDFWKQGVAVWNP 116
Query: 120 FSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYSLLP 179
+ R + +++ + G G+ + K K +I+ Y N R L
Sbjct: 117 WLRQVGWI----EYEDKGFRFCGVGY-DSCKPDKCYKILGYF-------NCTRRLSDSLQ 164
Query: 180 ESEVQVLSLGNGSVTWRSIGN-RSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQLISFD 238
E Q S ++ I F L ++ + +NG L+WL + +FD
Sbjct: 165 EGYYQAAIYECASQAFKFIDTPNPFNLW-PNKDPLSVNGNLYWLAHNHPETLEYFIETFD 223
Query: 239 LRDEKFK 245
E FK
Sbjct: 224 FSMEIFK 230
>AT3G17560.1 | Symbols: | F-box family protein |
chr3:6006762-6008003 FORWARD
Length = 413
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 141/343 (41%), Gaps = 51/343 (14%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
LP+++ I S++ +T L ++S C+ +L +D HF++ R + ++ ++
Sbjct: 15 LPQDVIEEIFSKVPVTCLRRIRSTCKRLYALLKDRGFIRKHFAKSARQYHALMLKNF--- 71
Query: 64 IQNHLYTLHFSDHG------SIETPTRIHI-PMISELAIVGS---CNGLLCLWHSLYKDE 113
Y++ F+ +G S+ R I P S AI+ C+GLL + ++
Sbjct: 72 ---RFYSVSFNPNGTEMDVASLFNGERSLIDPYSSSEAIISQAFHCDGLLLC--TTKENR 126
Query: 114 CYIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRI-VYYKKEDEEVDNLQL 172
+ NPFS L + + + VLG+ ++ YK++ Y++E E + N
Sbjct: 127 LVVLNPFSGQTKWLQPQNRCKIDEAYVLGYDNSDLCHSYKILSFPDLYEQELETIKNAG- 185
Query: 173 RRYSLLPESEVQVLSLGNGSVTWR---------SIGNRSFQLGIQSQSQ----------- 212
R + PE ++++ + S +WR +G + + S +
Sbjct: 186 RDLDVTPEGDLELKTDDFSSNSWRRNLGVTPHGGLGLKIYDFSSNSWKKLDVITPEGCLK 245
Query: 213 ---VLINGRLHWL-TDQLRHQAPRQLISFDLRDEKFKEIPSPNDRRFAIFCSHL--VILR 266
V + G +W+ + R L+SFD E F+ + P + F + V+
Sbjct: 246 SYGVSLKGNAYWVYMSKRRGVNDYSLLSFDFSTESFQHLCVPFHQEADCFGTMALSVVRE 305
Query: 267 GCLSAVVRGYGQLGV--WVMKEYGVQ-DSWTKEFVI--KSHLP 304
LS + + L V W+ KE SW K + + HLP
Sbjct: 306 EHLSLLYQSCETLKVEIWMTKEIDTTFVSWKKFLTVDLEPHLP 348
>AT2G43260.1 | Symbols: | F-box family protein / S locus-related |
chr2:17983744-17985089 REVERSE
Length = 420
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 122/305 (40%), Gaps = 48/305 (15%)
Query: 20 SLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLPIQNHLYTLHFSDHGSI 79
S++ + V + WRSL + A H S + ++ Y+ L S
Sbjct: 29 SILKCRIVSKQWRSLLESSRFAERHMSLQNSRRR--ILAAYNCDCGGRRKLLPESRFEGD 86
Query: 80 ETPTRIHIPMISELAIVGSCNGLLCLWHSLYKDECYIYNPFSRHYTKLPKPEQFQTQKRV 139
E +H +C G++C +D + NP + + P + R+
Sbjct: 87 EEIVYLHCDASRPSM---TCQGVICF---PEQDWIIVLNPSTSQLRRFPSGLNHNCRFRI 140
Query: 140 -----------VLGFGFHEITKEYKVVRI--VYYKKEDEEVDNLQLRRYSLLPESEVQVL 186
V+GFG ++ YKVVR+ +++ EE P E VL
Sbjct: 141 GLWKTFSPGNWVMGFGRDKVNGRYKVVRMSFAFWRVRQEE------------PVVECGVL 188
Query: 187 SLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQLISFDLRDEKFKE 246
+ G WR + + + + S+S V +NG ++WL Q + ++++ DL E+F +
Sbjct: 189 DVDTGE--WRKLSPPPYVVNVGSKS-VCVNGSIYWLHIQTVY----RILALDLHKEEFHK 241
Query: 247 IPSPNDRRFAIFCSHLVILRGCLS-AVVRGYGQ--LGVWVMKEYGVQDSWTKEFVIK-SH 302
+P P + + +V L L A+ R + L VW M Y ++ W+K + I H
Sbjct: 242 VPVPPTQ--ITVDTQMVNLEDRLVLAITRVSPEWILEVWGMDTY--KEKWSKTYSISLDH 297
Query: 303 LPLKW 307
+ W
Sbjct: 298 RVVSW 302
>AT1G52490.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), F-box associated type 3
(InterPro:IPR013187), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT1G32420.1); Has
1001 Blast hits to 983 proteins in 39 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1001;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:19556218-19559011 REVERSE
Length = 513
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 101 GLLCLWHSLYKDECYIYNPFSRHYTKLPKPEQ--FQTQKRVVLGFGFHEITKEYKVVRIV 158
G +C S+Y D IYNP +R LPK E ++ FG+ + EYKV+ +V
Sbjct: 59 GFICCSSSVY-DLVTIYNPTTRQCLPLPKIESMVLSPKRHKHCYFGYDHVMNEYKVLAMV 117
Query: 159 YYKKEDEEVDNLQLRRYSLLPESEVQVLSLGNGSVTWRSI-GNRSFQLGIQSQSQVLING 217
+E + V +LG WR I GN ++L S++ V I+G
Sbjct: 118 NDSQELTQT---------------FHVFTLGRDCPQWRKIRGNIDYELISVSRAGVCIDG 162
Query: 218 RLHWLTDQLRHQAPRQ---LISFDLRDEKFKEIPSPNDRRFAIFCSHLVIL--RGCLSAV 272
++++ + + ++SFD++ E+F + +P + ++ C+ + +G L +
Sbjct: 163 TIYYVAVRRKDNENYGELFMMSFDVKSERFYHVRTP-ETLWSPKCTERGLFNHQGKLGCI 221
Query: 273 VRGYGQLGVWVMKEYGVQD 291
+ +W+M+ Q+
Sbjct: 222 SSNENNISMWIMENAEKQE 240
>AT1G53790.2 | Symbols: | F-box family protein |
chr1:20079558-20081394 REVERSE
Length = 461
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 43/260 (16%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
+P ++ ++I SR+ S+ + V + W S+ P L F M P L+ +
Sbjct: 82 IPIDLLMDIFSRVPAKSIARFRCVSKLWESILCRPDFKEL-FMTMSSIRPPLLLFTF--- 137
Query: 64 IQNHLYTLHF--SDHGSIE-------TPTRIHIPMISE-LAIVGS--CNGLLCLWHSLYK 111
Q+ L F S H I PTR H+ ++ + +GS C G +C
Sbjct: 138 -QDDDGNLFFFSSPHPQIPCNENTSLVPTRYHVQHTTDSFSEIGSPLC-GFICRRGKRNL 195
Query: 112 DECYIYNPFSRHYTKLPKPE--QFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDN 169
D I NP + LPK E T+ R LG+ + K+ KV+ I K D+
Sbjct: 196 DTMVICNPVTGESVSLPKVELKSINTETRPYLGY--DPVRKQLKVLCI----KSDD---- 245
Query: 170 LQLRRYSLLPES--EVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLR 227
+P + E QVL+L NG+ WR+I + + I+G L++
Sbjct: 246 --------IPNTCDEHQVLTLENGNHLWRTIQCKPHY---PKSDGICIDGILYYTAGFDM 294
Query: 228 HQAPRQLISFDLRDEKFKEI 247
++ FD+R EKF I
Sbjct: 295 RARVSMVVCFDVRSEKFSFI 314
>AT1G53790.1 | Symbols: | F-box family protein |
chr1:20079694-20081394 REVERSE
Length = 444
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 43/260 (16%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
+P ++ ++I SR+ S+ + V + W S+ P L F M P L+ +
Sbjct: 82 IPIDLLMDIFSRVPAKSIARFRCVSKLWESILCRPDFKEL-FMTMSSIRPPLLLFTF--- 137
Query: 64 IQNHLYTLHF--SDHGSIE-------TPTRIHIPMISE-LAIVGS--CNGLLCLWHSLYK 111
Q+ L F S H I PTR H+ ++ + +GS C G +C
Sbjct: 138 -QDDDGNLFFFSSPHPQIPCNENTSLVPTRYHVQHTTDSFSEIGSPLC-GFICRRGKRNL 195
Query: 112 DECYIYNPFSRHYTKLPKPE--QFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDN 169
D I NP + LPK E T+ R LG+ + K+ KV+ I K D+
Sbjct: 196 DTMVICNPVTGESVSLPKVELKSINTETRPYLGY--DPVRKQLKVLCI----KSDD---- 245
Query: 170 LQLRRYSLLPES--EVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLR 227
+P + E QVL+L NG+ WR+I + + I+G L++
Sbjct: 246 --------IPNTCDEHQVLTLENGNHLWRTIQCKPHY---PKSDGICIDGILYYTAGFDM 294
Query: 228 HQAPRQLISFDLRDEKFKEI 247
++ FD+R EKF I
Sbjct: 295 RARVSMVVCFDVRSEKFSFI 314
>AT3G08750.1 | Symbols: | F-box family protein |
chr3:2656716-2657825 REVERSE
Length = 369
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 42/288 (14%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDL 62
SLP E+ IL ++ SLI KS C+ W +L + ++ +D + I YD
Sbjct: 11 SLPFELIEEILYKIPAESLIRFKSTCKKWYNLITE---KRFMYNHLDHYSPERFIRTYDQ 67
Query: 63 PIQNHLYTLHFSDHGSIETPTRIHIPMISELAIVGSCNGLLCLWHSLYKDECYIYNPFSR 122
I + + T SD I R P+ S + C+GL+ + + ++NP R
Sbjct: 68 QIIDPV-TEILSD-ALIPDEFRDLYPIYSMV----HCDGLMLCTCRKWDNSLAVWNPVLR 121
Query: 123 HYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYSLLPESE 182
+ + V +G+ + YK+++++ +D++ D P E
Sbjct: 122 EIKWIKPSVCYLHTDYVGIGYDDNVSRDNYKILKLLGRLPKDDDSD----------PNCE 171
Query: 183 VQVLSLGNGSVTWRS-IGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQLISFDLRD 241
+ S +W++ + + + I+ + V + G+++W+ + + +I FD
Sbjct: 172 IYEFK----SDSWKTLVAKFDWDIDIRCNNGVSVKGKMYWIA---KKKEDFTIIRFDFST 224
Query: 242 EKFKEIPSPNDRRFAIFCSHLVILR-GC-----LSAVVRGYGQLGVWV 283
E FKEI C + ++ R GC LS +++G G+ V
Sbjct: 225 ETFKEI---------CVCPYTLVTRLGCFDGDRLSLLLQGEESQGIEV 263
>AT1G12860.1 | Symbols: SCRM2, ICE2 | SCRM2 (SCREAM 2); DNA binding
/ transcription factor | chr1:4382223-4386392 FORWARD
Length = 828
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 130/334 (38%), Gaps = 68/334 (20%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDL 62
SLP ++ I RL + ++I +KS+ + WRS + H ++R+ D
Sbjct: 70 SLPNDVVEEIFLRLPVKAIIQLKSLSKQWRSTIESRSFEERHLKIVERS-------RVDF 122
Query: 63 P---IQNHLYTLHFS------------------DHGSIETPTRIHIPMISELAIVG--SC 99
P + + Y+L S + SI + T I P + I SC
Sbjct: 123 PQVMVMSEEYSLKGSKGNQPRPDTDIGFSTICLESASILSSTLITFPQGFQHRIYASESC 182
Query: 100 NGLLCLWHSLYKDECYIYNPFSRHYTKLPKPEQFQ--------TQ------KRVVLGFGF 145
+GL C+ HSL Y+ NP +R + +LP P +FQ TQ K VV F
Sbjct: 183 DGLFCI-HSLKTQAIYVVNPATRWFRQLP-PARFQILMQKLYPTQDTWIDIKPVVCYTAF 240
Query: 146 HEITKEYKVVRIVYYKKEDEEVDNLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQL 205
+ +YK +V+ D NL + ++ +V + WR +
Sbjct: 241 VK-ANDYK---LVWLYNSDASNPNLGV--------TKCEVFDFRANA--WRYLTCTPSYR 286
Query: 206 GIQSQSQVLINGRLHWLTDQLRHQAPRQLISFDLRDEKFKEIPSPNDRRFAIFCSHL--- 262
Q NG ++W T+ + ++++ D+ E F+ +P N + H+
Sbjct: 287 IFPDQVPAATNGSIYWFTEPYNGEI--KVVALDIHTETFRVLPKINPAIASSDPDHIDMC 344
Query: 263 VILRG-CLSAVVRGYGQLGVWVMKEYGVQDSWTK 295
+ G C+S +W +K +DSW K
Sbjct: 345 TLDNGLCMSKRESDTLVQEIWRLK--SSEDSWEK 376
>AT3G10240.1 | Symbols: | F-box protein-related |
chr3:3166698-3167867 FORWARD
Length = 389
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 143/362 (39%), Gaps = 57/362 (15%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDR-----TANPCLIL 58
+P ++ IL RL S+ + V + W S+ +P L +R R AN +
Sbjct: 27 IPLDLVSEILLRLPEKSVARFRCVSKPWSSITTEPYFINLLTTRSPRLLLCFKANEKFFV 86
Query: 59 HYDLPIQNHLYTLHFSDHGSIETPTRIHIPMISELAI---VGSCNGLLCLWHSLYKDECY 115
+P + H + R H+ E+ S NGL+C S
Sbjct: 87 S-SIPQHRQTFETWNKSHSYSQLIDRYHMEFSEEMNYFPPTESVNGLICFQESA---RLI 142
Query: 116 IYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRY 175
++NP +R LPKP + LG+ + ++KV+ + + D
Sbjct: 143 VWNPSTRQLLILPKPNGNSNDLTIFLGYD--PVEGKHKVMCMEFSATYD----------- 189
Query: 176 SLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQLI 235
+VL+LG+ WR++ + S ING ++ + ++ L+
Sbjct: 190 ------TCRVLTLGSAQKLWRTVKTHNKHRSDYYDSGRCINGVVYHIA-YVKDMCVWVLM 242
Query: 236 SFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGY---GQLGVWVMKEYGVQDS 292
SFD+R E F I P+ + L+ G L+ V R + +W+++++ +
Sbjct: 243 SFDVRSEIFDMIELPSS---DVHKDVLIDYNGRLACVGREIIEKNGIRLWILEKH---NK 296
Query: 293 W-TKEFVIKSHLPLKWLDEPYFNGSFNLSLSKARVLCSLRNGEIL----LEYKGRSIVSY 347
W +K+F+ PL +D+ +LS +K + GEI+ + +K I Y
Sbjct: 297 WSSKDFLA----PLVHIDK-------SLSTNKFLLKGFTHAGEIIYVESMFHKSAKIFFY 345
Query: 348 NP 349
+P
Sbjct: 346 DP 347
>AT1G53360.1 | Symbols: | F-box family protein-related |
chr1:19907517-19908548 FORWARD
Length = 343
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 23/227 (10%)
Query: 75 DHGSIETPTRIHIPMISELAIVGSCNGLLCLWHSLYKDECYIYNPFSRHYTKLPKPEQFQ 134
D+ S+ P I + GL+ L L K I NP S Y LPK +
Sbjct: 63 DNSSLVATPYKRFPKYLPTRICTTLGGLVFLQKWLRKKTRVICNPVSGDYITLPKVKATG 122
Query: 135 TQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRYSLLPESEVQVLSLGNGSVT 194
+ FGF ITK++KV+ + + RY P + QVL+L G
Sbjct: 123 VGESY---FGFDPITKQFKVLCMTW-------------SRYG-TPNTH-QVLTLETGKRL 164
Query: 195 WRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQLISFDLRDEKFKEIPSPNDRR 254
WR+I + +S ++ ING L++ D Q+ + ++ FD R EKF I ++
Sbjct: 165 WRTIQDPILP-HYRSFDRICINGVLYYGADFEESQSSK-IVCFDFRFEKFSFINIADEGM 222
Query: 255 F-AIFCSHLVILRGCLSA-VVRGYGQLGVWVMKEYGVQDSWTKEFVI 299
F + L +G L A G+L +WV+++ W+K I
Sbjct: 223 FRGSYKWTLFNYKGKLGAHQYSRNGELVLWVLED-AENHKWSKSICI 268
>AT1G62270.1 | Symbols: | F-box family protein |
chr1:23004499-23005650 FORWARD
Length = 383
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 43/262 (16%)
Query: 3 SLPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDL 62
SLP ++ +IL+R+ TSL ++S C+ W L D + +HF + ++ ++ Y +
Sbjct: 11 SLPWDLVEDILARVPATSLKRLRSTCKQWNFLFNDQIFTKMHFDKAEKQFLVLILRLYTV 70
Query: 63 -PIQNHLYTLHFSDHGSIETPTRIHI--PMISE----LAIVGSCNGLLCLWHSLYKDECY 115
+ L LH + SIE + + P S ++ V CNGLL
Sbjct: 71 CSMSLDLRGLHDNIDPSIEVKGELSLIDPHCSSRKTFVSKVFHCNGLLL---CTTMTGLV 127
Query: 116 IYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNLQLRRY 175
++NP + + + LG+G ++ YK+++ + ++++ L Y
Sbjct: 128 VWNPCTDQTRWIKTEVPHNRNDKYALGYGNYKSCYNYKIMKFL-------DLESFDLEIY 180
Query: 176 SLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQ-VLINGRLHWLTDQLRHQAPRQ- 233
+ S +WR +G + I ++ V + G +W+ R + +
Sbjct: 181 EV-------------NSNSWRVLGTVTPDFTIPLDAEGVSLRGNSYWIASHKREEIEEEE 227
Query: 234 -----------LISFDLRDEKF 244
LISFD E+F
Sbjct: 228 EEENEYFINDFLISFDFTTERF 249
>AT3G17570.1 | Symbols: | F-box family protein |
chr3:6009413-6010558 FORWARD
Length = 381
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILH-YDL 62
LPR++ ILSR+ TSL +K C+ W +L +DP H R +R + L Y L
Sbjct: 5 LPRDLETEILSRVPATSLQKLKPTCKRWYTLFKDPEFLKKHVGRAEREVISLMSLRVYSL 64
Query: 63 PIQNHLYTLHFSDHGSIETPTRIHIPMISE---LAIVGSCNGLLCLWHSLYKDECYIYNP 119
+ +L + H S+E ++ SE ++ + CNGLL + ++NP
Sbjct: 65 SV--NLSGI----HSSVEMTGMLNSLKDSEDVKISDITECNGLLLC--TTDDSRLVVWNP 116
Query: 120 FSRHYTKLPKPEQ--FQTQKRVVLGFGFHEITK-EYKVVR 156
++ +P ++ ++ VLG+ ++ YK++R
Sbjct: 117 YTGETRWIPYKSNSPYEMYQKFVLGYDNTNKSRYSYKILR 156
>AT1G15680.1 | Symbols: | F-box family protein |
chr1:5393407-5394639 FORWARD
Length = 410
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 36/268 (13%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLH-FSRMDRTANPCLIL-HYD 61
LP E+ I++RL S+ KSVC+ WRSL + L F+ + +++ L+ +
Sbjct: 19 LPEELLAEIVARLPFISITRFKSVCKGWRSLIESTYFRHLFVFAHRNSSSSWSLVCGTFG 78
Query: 62 LPIQNHLYTLHFSDHGSIETPTRI--HIP---MISELAIVGSCNGLLCLWHSLYKDECYI 116
++ +G P R+ +IP ++ + IV +GL+ L ++ +
Sbjct: 79 WSVEEMAGFYGCKRYG---LPRRLGSYIPPHGLVDKHKIVACTDGLVLLQTVTKRETFSV 135
Query: 117 YNPFSRHYTKLPKPEQFQTQKRVVLGFGF-----HEITKEYKVVRI-VYYKKEDEEVDNL 170
+P R + +LP P ++ VL G + EYKVV + + Y+ EV++L
Sbjct: 136 GSPVLRQWVQLP-PHPWKGISSSVLAIGLVTRVEDGVVMEYKVVCMDIDYR---WEVESL 191
Query: 171 QLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLHWLTDQLR-HQ 229
L YS L G+ T + + S + + + + + LHWL R
Sbjct: 192 ILEIYSSL-----------TGTWTRKKVRCPSLIVSLSYKRCLSLKKMLHWLDTHYRCRS 240
Query: 230 APRQLISFDL----RDEKFKEIPSPNDR 253
+ ++++D+ +++F+ IP P+ +
Sbjct: 241 SVGAIVAYDVYADDDEQQFRIIPFPDQK 268
>AT1G47730.1 | Symbols: | F-box family protein |
chr1:17563931-17565106 REVERSE
Length = 391
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 153/396 (38%), Gaps = 88/396 (22%)
Query: 4 LPREIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLILHYDLP 63
LP ++ I SRL S++ + V + W S+ P +R P L+ +
Sbjct: 25 LPLDLTSEIFSRLPAKSVVRFRCVSKLWSSITTAPYFTNSFETR------PNLMFFFKEG 78
Query: 64 IQNHLYTL----------------HFSDHGSIETPTRIHIPMISELAIVGSCNGLLCLWH 107
+ ++T+ D P R + ++E S +GL+C
Sbjct: 79 DKFFVFTIPQHNQNPNESYSYSSSEIIDSYHTTYPKRCCVTTLTE-----SVHGLICFRK 133
Query: 108 SLYKDECYIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEV 167
+ I+NP R + L K + + K + + G+ + ++KVV + Y
Sbjct: 134 AATP---IIWNPTMRKFKPLRKLD--ERWKNIKVSLGYDPVDGKHKVVCMPYGNA----- 183
Query: 168 DNLQLRRYSLLPESEVQVLSLGNGSVTWRSIGNR------SFQLGIQSQSQVLINGRLHW 221
E +VL+LG+ WR++ +F G+ + ING +++
Sbjct: 184 ------------FYECRVLTLGSDQ-EWRTVKTNHKNSPFTFHGGVCYRQSRCINGVIYY 230
Query: 222 LTDQLRHQAPRQLISFDLRDEKFKEIPSPNDRRFAIFCSHLVILRGCLSAVVRGY--GQL 279
D + R ++SFD+R E+F I P D F + ++ +G L+ + +
Sbjct: 231 RADT---NSGRVILSFDVRSERFDVIELPWDENFGLVM--MMSYKGRLACLGFNHEKNSR 285
Query: 280 GVWVMKEYGVQDSWTKEFVIKSHLPLKWLDEPYFNGSFNLSLSKARVLCSLRNGEILLEY 339
+WV+ ++ +E+ ++LP+ EP FNL+ +GE++
Sbjct: 286 SMWVL-----ENVEQREWSCHTYLPISHY-EPGLENYFNLT-------GITNDGELI--- 329
Query: 340 KGRSIVSYNPN--FGTFKELSFQCLPECFNVVVHMG 373
Y PN F + F + E F V++ G
Sbjct: 330 -------YVPNTVLERFHVIYFDAIRETFRRVIYKG 358
>AT2G23160.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated type 3
(InterPro:IPR013187), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT2G16450.1); Has
750 Blast hits to 732 proteins in 29 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 750;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr2:9862470-9863393 FORWARD
Length = 307
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 108/261 (41%), Gaps = 47/261 (18%)
Query: 7 EIALNILSRLTITSLIHVKSVCRSWRSLAQDPLLAPLHFSRMDRTANPCLIL-------- 58
++ ILSR+ S+ + V + W S+ + P L +R + PC++
Sbjct: 10 DLIAEILSRVPSKSVARFRCVSKPWASMIRRPYFTELFLTR--SSPKPCILFATVADGVW 67
Query: 59 -HYDLPIQNHLYTLHFSDHGSIE-----TPTRIHIPMISELAIV--GSCNGLLCLWHSLY 110
+ LP + + S S + P + I S+ G +GL+ L+
Sbjct: 68 SFFSLPQYPYEKSSSASVAASAKFHVKFPPNNMRIGHNSDRRYFSYGYTSGLIYLYGDSS 127
Query: 111 KDECYIYNPFSRHYTKLPKPEQFQTQKRVVLGFGFHEITKEYKVVRIVYYKKEDEEVDNL 170
D I NP++ Y LP ++++ ++ F I K++K++ + Y
Sbjct: 128 DDRSVICNPYTGEYAILPYLQRYRKTYSFLV---FEPIEKQFKILFMAY----------- 173
Query: 171 QLRRYSLLPESEVQVLSLGNGSVTWRSIGNRSFQLGIQSQSQVLINGRLH-------WLT 223
L + + ++L++G G++ WR+I S + I S+ V ING L+ W
Sbjct: 174 ------LSGDRDHKILTVGTGNMKWRTI-RCSLRYEIVSEG-VSINGVLYYLGETSAWDN 225
Query: 224 DQLRHQAPRQLISFDLRDEKF 244
+ ++ FD+R EKF
Sbjct: 226 KDYDLKYDYAIVCFDIRSEKF 246
>AT3G62380.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: S locus F-box-related / SLF-related
(TAIR:AT1G71320.1); Has 180 Blast hits to 179 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 178; Viruses - 0; Other Eukaryotes -
2 (source: NCBI BLink). | chr3:23083609-23084852 REVERSE
Length = 325
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 48/226 (21%)
Query: 95 IVGSCNGLLCLWHSLYKDECYIYNPFSRHYTKLPKPE---------QFQTQKRVVLGFGF 145
I+G CNG++C++ Y Y+ NP +R ++ PE + + +GFG
Sbjct: 74 IMGYCNGIVCIYDLGY---IYLINPATRK-LRILSPEFLREYTGRTGWSNDLPINVGFGR 129
Query: 146 HEITKEYKVVRIVYYKKEDEEVDNLQL----RRYSLLPESEVQVLSLGNGSVTWRSIGNR 201
+T YKV+ + + + + + L L RRY P S Q LGN
Sbjct: 130 DMVTGTYKVILMYLFDRNFVKTEALNLKNGERRYVYFPISYGQ---LGN----------- 175
Query: 202 SFQLGIQSQSQVLINGRLHWLTDQLRHQAPRQLI---SFDLRDEKFKEIPSPNDRRFAIF 258
+ + NG L+WL QLI + DL E F+ +P P+ + +
Sbjct: 176 -------DKRSIFANGSLYWLPKPDVDFYTNQLIKLAAIDLHTETFRYVPLPS--WYTKY 226
Query: 259 CSHLVI--LRG--CLSAVVRGYGQLGVWVMKEYGVQDSWTKEFVIK 300
C + + L+ C+S V++ + VW +++ W K F +
Sbjct: 227 CKSVYLWSLKDSLCVSDVLQN-PSVDVWSLQQEEPSVKWEKMFSVN 271
>AT3G20620.1 | Symbols: | F-box family protein-related |
chr3:7198708-7199969 REVERSE
Length = 391
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 46/248 (18%)
Query: 93 LAIVGSCNGLLCLWHSLYKDEC---------YIYNPFSRHYTKLPK-PEQFQTQKRVVLG 142
+ ++ S NG++C + +Y ++ +I NP ++ LP+ F+ + + +
Sbjct: 92 MYMISSYNGIICCVNMIYDEDVENKFCDLQIWICNPITKETLLLPQGTPSFEFEPSIGVA 151
Query: 143 FGFHEITKEYKVVRI------VYYKKEDEEVDNLQLRRY------SLLPESEVQVLSLGN 190
+G +YKV RI + ++ E +Q R+ SL E EV S G
Sbjct: 152 YGSD--VSDYKVYRIFCTGKIIPEERGPAEGFYVQEGRFFTKYGHSLAYECEVYSSSTG- 208
Query: 191 GSVTWRSIGN-----RSFQL-GIQSQSQVLINGRLHWLTDQLRHQAPRQLISFDLRDEKF 244
+W++IG S L + + + G+++WL + AP +++S DL + KF
Sbjct: 209 ---SWKNIGTVPCLPMSCSLRPYRRTGHIFVGGKVYWL---VSLDAPGKILSVDL-EGKF 261
Query: 245 KEIPSP------NDRRFAIFCSHLVILRGCLSAVVRGYGQLGVWVMKEYGVQDSWTKEFV 298
+ I P + SHL+ L+G L +V + VWV K G + SW +F
Sbjct: 262 EVINLPAYADGLREDEQITEASHLINLKGSLGLLVLHPENMDVWVWKHDGERYSWVFQF- 320
Query: 299 IKSHLPLK 306
K +P+K
Sbjct: 321 -KDVVPIK 327
>AT3G23960.1 | Symbols: | F-box family protein |
chr3:8657736-8658944 FORWARD
Length = 402
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 36/212 (16%)
Query: 112 DECYIYNPFSRHYTKLPKPEQFQTQKRVVLGF-GFHEITKEYKVVRIVYYKKEDEEVDNL 170
D IYNP + LPK + + V F G+ I K+YKV+ + N+
Sbjct: 147 DVSIIYNPSTGESLTLPKTNMTRKKIYTVTSFLGYDPIEKQYKVLSM-----------NM 195
Query: 171 QLRRYSLLPESE-VQVLSLGNGSVTWRSIG-NRSFQLGIQSQSQVLINGRLHWLTDQLRH 228
++ P+ E QVL+LG G ++WR I ++Q +++ S++ ING L++L
Sbjct: 196 SYEKH---PKCEGYQVLTLGTGKLSWRMIKCCLNYQHPLKN-SEICINGVLYYLAMVNGS 251
Query: 229 QAP-RQLISFDLRDEKFKEIPSPNDRRFAIFC-----SHLVILRG-----CLSAVVRGYG 277
P R ++ FD+R E F + + + L +L G +S + R +
Sbjct: 252 SWPTRAVVCFDIRSEMFNFMEVYRELSYTTTLINYNNGKLGMLMGQEAHKTISGICRSF- 310
Query: 278 QLGVWVMKEYGVQDSWTKEFVIKSHLPLKWLD 309
+WV+++ V+ W+K + LP W D
Sbjct: 311 --ELWVLED-TVKHEWSKHVYL---LPPLWKD 336