Jatropha Genome Database

JcCB0396881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0396881.10 + phase: 0 /pseudo/partial
         (92 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34740.1 | Symbols:  | catalytic/ protein serine/threonine ph...    99   5e-22
AT2G20630.2 | Symbols:  | protein phosphatase 2C, putative / PP2...    88   1e-18
AT2G20630.1 | Symbols:  | protein phosphatase 2C, putative / PP2...    88   1e-18
AT4G28400.1 | Symbols:  | protein phosphatase 2C, putative / PP2...    85   1e-17
AT3G15260.2 | Symbols:  | protein phosphatase 2C, putative / PP2...    75   8e-15
AT3G15260.1 | Symbols:  | protein phosphatase 2C, putative / PP2...    75   8e-15
AT1G78200.2 | Symbols:  | protein phosphatase 2C, putative / PP2...    74   3e-14
AT1G78200.1 | Symbols:  | protein phosphatase 2C, putative / PP2...    74   3e-14
AT1G34750.1 | Symbols:  | protein phosphatase 2C, putative / PP2...    69   9e-13
AT1G22280.1 | Symbols:  | protein phosphatase 2C, putative / PP2...    65   9e-12
AT1G22280.2 | Symbols:  | protein phosphatase 2C, putative / PP2...    62   6e-11
AT1G43900.1 | Symbols:  | protein phosphatase 2C, putative / PP2...    52   9e-08
AT5G53140.1 | Symbols:  | protein phosphatase 2C, putative / PP2...    50   3e-07
AT5G10740.1 | Symbols:  | protein phosphatase 2C-related / PP2C-...    50   3e-07
AT5G24940.1 | Symbols:  | protein phosphatase 2C, putative / PP2...    48   1e-06

>AT2G34740.1 | Symbols:  | catalytic/ protein serine/threonine
           phosphatase | chr2:14658730-14660305 FORWARD
          Length = 339

 Score = 99.4 bits (246), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/59 (67%), Positives = 54/59 (91%)

Query: 26  HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
           HGYH+V+G+MGHGMED++VA+++ + G+ LGLYAIFDGHSG DVA YLQ+HLFDN+L++
Sbjct: 88  HGYHLVKGQMGHGMEDFIVADTKTVKGHNLGLYAIFDGHSGSDVADYLQNHLFDNILSQ 146


>AT2G20630.2 | Symbols:  | protein phosphatase 2C, putative /
          PP2C, putative | chr2:8897335-8899648 REVERSE
          Length = 290

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/59 (64%), Positives = 50/59 (84%)

Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
          HGY  V+GK GH MEDY+V+E ++++G+ LGL+AIFDGH G DVAKYLQ++LFDN+L E
Sbjct: 32 HGYDFVKGKAGHPMEDYVVSEFKKVDGHDLGLFAIFDGHLGHDVAKYLQTNLFDNILKE 90


>AT2G20630.1 | Symbols:  | protein phosphatase 2C, putative /
          PP2C, putative | chr2:8897826-8899648 REVERSE
          Length = 279

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/59 (64%), Positives = 50/59 (84%)

Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
          HGY  V+GK GH MEDY+V+E ++++G+ LGL+AIFDGH G DVAKYLQ++LFDN+L E
Sbjct: 32 HGYDFVKGKAGHPMEDYVVSEFKKVDGHDLGLFAIFDGHLGHDVAKYLQTNLFDNILKE 90


>AT4G28400.1 | Symbols:  | protein phosphatase 2C, putative /
          PP2C, putative | chr4:14048499-14050118 FORWARD
          Length = 283

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/59 (62%), Positives = 49/59 (83%)

Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
          HG+H V+GK  H MEDY+V+E +++ G+ LGL+AIFDGH G DVAKYLQ++LFDN+L E
Sbjct: 36 HGFHCVKGKSSHPMEDYVVSEFKKLEGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKE 94


>AT3G15260.2 | Symbols:  | protein phosphatase 2C, putative / PP2C,
           putative | chr3:5138842-5140242 FORWARD
          Length = 289

 Score = 75.1 bits (183), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 45/59 (76%)

Query: 26  HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
           HG+H+V+GK  H MEDY+VA+ +E++   LGL+AIFDGH   ++  YL SHLF+N+L E
Sbjct: 42  HGFHLVKGKAFHEMEDYVVAKFKEVDDNELGLFAIFDGHLSHEIPDYLCSHLFENILKE 100


>AT3G15260.1 | Symbols:  | protein phosphatase 2C, putative / PP2C,
           putative | chr3:5138842-5140242 FORWARD
          Length = 289

 Score = 75.1 bits (183), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 45/59 (76%)

Query: 26  HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
           HG+H+V+GK  H MEDY+VA+ +E++   LGL+AIFDGH   ++  YL SHLF+N+L E
Sbjct: 42  HGFHLVKGKAFHEMEDYVVAKFKEVDDNELGLFAIFDGHLSHEIPDYLCSHLFENILKE 100


>AT1G78200.2 | Symbols:  | protein phosphatase 2C, putative /
          PP2C, putative | chr1:29420483-29421650 FORWARD
          Length = 283

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 41/59 (69%)

Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
          +G+ +++GK  H MEDY VA+    NG  LGL+AIFDGH G  VA YLQ HLF N+L +
Sbjct: 33 YGFSLIKGKSNHSMEDYHVAKFTNFNGNELGLFAIFDGHKGDHVAAYLQKHLFSNILKD 91


>AT1G78200.1 | Symbols:  | protein phosphatase 2C, putative /
          PP2C, putative | chr1:29420483-29421650 FORWARD
          Length = 283

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 41/59 (69%)

Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
          +G+ +++GK  H MEDY VA+    NG  LGL+AIFDGH G  VA YLQ HLF N+L +
Sbjct: 33 YGFSLIKGKSNHSMEDYHVAKFTNFNGNELGLFAIFDGHKGDHVAAYLQKHLFSNILKD 91


>AT1G34750.1 | Symbols:  | protein phosphatase 2C, putative /
          PP2C, putative | chr1:12736386-12737727 REVERSE
          Length = 282

 Score = 68.6 bits (166), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/58 (55%), Positives = 41/58 (70%)

Query: 27 GYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
          GY +V+GK  H MEDY V++  +I+G  LGL+AI+DGH G  V  YLQ HLF N+L E
Sbjct: 36 GYSLVKGKANHPMEDYHVSKFVKIDGNELGLFAIYDGHLGERVPAYLQKHLFSNILKE 93


>AT1G22280.1 | Symbols:  | protein phosphatase 2C, putative /
          PP2C, putative | chr1:7874236-7875496 FORWARD
          Length = 281

 Score = 65.1 bits (157), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 38/59 (64%)

Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
          +G+ +V+GK  H MEDY VA    I  + LGL+AI+DGH G  V  YLQ  LF N+L E
Sbjct: 34 YGFSLVKGKANHPMEDYHVANFINIQDHELGLFAIYDGHMGDSVPAYLQKRLFSNILKE 92


>AT1G22280.2 | Symbols:  | protein phosphatase 2C, putative /
          PP2C, putative | chr1:7874236-7875054 FORWARD
          Length = 199

 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 38/59 (64%)

Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
          +G+ +V+GK  H MEDY VA    I  + LGL+AI+DGH G  V  YLQ  LF N+L E
Sbjct: 34 YGFSLVKGKANHPMEDYHVANFINIQDHELGLFAIYDGHMGDSVPAYLQKRLFSNILKE 92


>AT1G43900.1 | Symbols:  | protein phosphatase 2C, putative / PP2C,
           putative | chr1:16654045-16655810 FORWARD
          Length = 371

 Score = 51.6 bits (122), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 26  HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLN 83
           +GY  ++GK    MEDY      ++NG  +  + +FDGH G   A+YL+++LF NL++
Sbjct: 124 YGYSSLKGKRA-TMEDYFETRISDVNGQMVAFFGVFDGHGGARTAEYLKNNLFKNLVS 180


>AT5G53140.1 | Symbols:  | protein phosphatase 2C, putative / PP2C,
           putative | chr5:21549228-21552132 FORWARD
          Length = 420

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 27  GYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLL 82
           GY   RGK    MED+   ++  I G  + ++ IFDGH G   A+YL+ HLF+NL+
Sbjct: 103 GYCSFRGKRS-TMEDFYDIKASTIEGQAVCMFGIFDGHGGSRAAEYLKEHLFNNLM 157


>AT5G10740.1 | Symbols:  | protein phosphatase 2C-related /
          PP2C-related | chr5:3393797-3395848 REVERSE
          Length = 354

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLL 82
          +GY    GK    MED+       ING  +GL+ +FDGH G   A+Y++ HLF NL+
Sbjct: 34 YGYASSAGKRS-SMEDFFETRIDGINGEIVGLFGVFDGHGGARAAEYVKRHLFSNLI 89


>AT5G24940.1 | Symbols:  | protein phosphatase 2C, putative /
          PP2C, putative | chr5:8591407-8593601 REVERSE
          Length = 447

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLL 82
          +GY    GK    MED+       I+G  +GL+ +FDGH G   A+Y++ HLF NL+
Sbjct: 34 YGYASSAGKRS-SMEDFFETRIDGIDGEIVGLFGVFDGHGGSRAAEYVKRHLFSNLI 89