Jatropha Genome Database

JcCB0395701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0395701.10 + phase: 0 /pseudo/partial
         (85 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G04560.1 | Symbols:  | transferase, transferring glycosyl gro...    87   2e-18

>AT2G04560.1 | Symbols:  | transferase, transferring glycosyl
          groups | chr2:1590341-1592667 REVERSE
          Length = 455

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)

Query: 22 RRYISV-SSKTVMDIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGGV 80
          +RY S  ++K+V+D A  DGELRVF+V+GEVSGD IGSRLM+SLKKLSP PIRF GVGG 
Sbjct: 19 KRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIRFNGVGGS 78

Query: 81 L 81
          L
Sbjct: 79 L 79