Jatropha Genome Database

JcCB0392661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0392661.10 - phase: 0 /partial
         (55 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05980.2 | Symbols: ATDFB | ATDFB (A. THALIANA DHFS-FPGS HOMO...    66   4e-12
AT5G05980.1 | Symbols: ATDFB, DFB | ATDFB (A. THALIANA DHFS-FPGS...    66   4e-12
AT3G55630.3 | Symbols: ATDFD | ATDFD (A. THALIANA DHFS-FPGS HOMO...    47   3e-06
AT3G55630.2 | Symbols: ATDFD | ATDFD (A. THALIANA DHFS-FPGS HOMO...    47   3e-06
AT3G55630.1 | Symbols: ATDFD | ATDFD (A. THALIANA DHFS-FPGS HOMO...    47   3e-06

>AT5G05980.2 | Symbols: ATDFB | ATDFB (A. THALIANA DHFS-FPGS
          HOMOLOG B); tetrahydrofolylpolyglutamate synthase |
          chr5:1799738-1804177 REVERSE
          Length = 513

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/37 (81%), Positives = 36/37 (97%)

Query: 17 YEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          YEEA+ ALSSLITKR+RADKSNKGDRF+L+FDYLK++
Sbjct: 9  YEEALAALSSLITKRSRADKSNKGDRFELVFDYLKLL 45


>AT5G05980.1 | Symbols: ATDFB, DFB | ATDFB (A. THALIANA DHFS-FPGS
           HOMOLOG B); tetrahydrofolylpolyglutamate synthase |
           chr5:1799738-1804441 REVERSE
          Length = 571

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/37 (81%), Positives = 36/37 (97%)

Query: 17  YEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
           YEEA+ ALSSLITKR+RADKSNKGDRF+L+FDYLK++
Sbjct: 67  YEEALAALSSLITKRSRADKSNKGDRFELVFDYLKLL 103


>AT3G55630.3 | Symbols: ATDFD | ATDFD (A. THALIANA DHFS-FPGS
          HOMOLOG D); tetrahydrofolylpolyglutamate synthase |
          chr3:20636785-20639395 FORWARD
          Length = 492

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 17 YEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          Y+  +DALSSLITKR R   +N+  RF LLF YLKV+
Sbjct: 13 YQNTLDALSSLITKRGRLASNNQSHRFRLLFHYLKVL 49


>AT3G55630.2 | Symbols: ATDFD | ATDFD (A. THALIANA DHFS-FPGS
          HOMOLOG D); tetrahydrofolylpolyglutamate synthase |
          chr3:20636785-20639395 FORWARD
          Length = 491

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 17 YEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          Y+  +DALSSLITKR R   +N+  RF LLF YLKV+
Sbjct: 13 YQNTLDALSSLITKRGRLASNNQSHRFRLLFHYLKVL 49


>AT3G55630.1 | Symbols: ATDFD | ATDFD (A. THALIANA DHFS-FPGS
          HOMOLOG D); tetrahydrofolylpolyglutamate synthase |
          chr3:20636785-20639395 FORWARD
          Length = 470

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 17 YEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          Y+  +DALSSLITKR R   +N+  RF LLF YLKV+
Sbjct: 13 YQNTLDALSSLITKRGRLASNNQSHRFRLLFHYLKVL 49