Jatropha Genome Database

JcCB0392311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0392311.10 + phase: 0 
         (143 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30135.1 | Symbols: JAZ8, TIFY5A | JAZ8 (JASMONATE-ZIM-DOMAIN...    86   9e-18
AT2G34600.1 | Symbols: JAZ7, TIFY5B | JAZ7 (JASMONATE-ZIM-DOMAIN...    65   2e-11

>AT1G30135.1 | Symbols: JAZ8, TIFY5A | JAZ8 (JASMONATE-ZIM-DOMAIN
           PROTEIN 8) | chr1:10596516-10597095 FORWARD
          Length = 131

 Score = 85.5 bits (210), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 68/133 (51%), Gaps = 8/133 (6%)

Query: 1   MRRNCNLELRLFPFPDSDDDHRRYFVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGNICV 60
           +++NC+LELRLFP     D      V ES  S                ++TIFYNG +C 
Sbjct: 3   LQQNCDLELRLFPTSYDSDSSDTTSVVESTSS------GNPQPNEESQRITIFYNGKMCF 56

Query: 61  C-DVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSPNNGLSMKRSLQRFLQ 119
             DVT LQAR+I+ +ASREM  K  S                  PN   SMK+SLQ FLQ
Sbjct: 57  SSDVTHLQARSIISIASREMKTKSSSNGSDPPNKSTSFHHNQL-PNPKASMKKSLQSFLQ 115

Query: 120 KRNHRIQATYPYN 132
           KR  RIQAT PY+
Sbjct: 116 KRKIRIQATSPYH 128


>AT2G34600.1 | Symbols: JAZ7, TIFY5B | JAZ7 (JASMONATE-ZIM-DOMAIN
           PROTEIN 7) | chr2:14573172-14573718 FORWARD
          Length = 148

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 66/140 (47%), Gaps = 22/140 (15%)

Query: 1   MRRNCNLELRLFPFPDSDDDHRRYFVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGNICV 60
           M+  C+LELRL       D H       S++                  LTIFYNG++CV
Sbjct: 20  MQTKCDLELRLLTSSYDSDFHSSLDESSSSEISQPKQESQI--------LTIFYNGHMCV 71

Query: 61  C-DVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSPNNGL-------SMKR 112
             D+T L+A  IL LASR++++K  S                  PNN         SMKR
Sbjct: 72  SSDLTHLEANAILSLASRDVEEKSLSLRSSDGSDPPTI------PNNSTRFHYQKASMKR 125

Query: 113 SLQRFLQKRNHRIQATYPYN 132
           SL  FLQKR+ RIQAT PY+
Sbjct: 126 SLHSFLQKRSLRIQATSPYH 145