Jatropha Genome Database

JcCB0387971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0387971.10 + phase: 0 
         (50 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32200.2 | Symbols: ATS1, ACT1 | ATS1; glycerol-3-phosphate O...    65   7e-12
AT1G32200.1 | Symbols: ATS1, ACT1 | ATS1; glycerol-3-phosphate O...    65   7e-12

>AT1G32200.2 | Symbols: ATS1, ACT1 | ATS1; glycerol-3-phosphate
           O-acyltransferase | chr1:11602223-11605001 REVERSE
          Length = 459

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/39 (79%), Positives = 35/39 (89%)

Query: 8   AGRKNDLLSGIRKEAEAGRLPSNVAAGMEELYQNYRNAV 46
           A  + DLLSGI+KEAEAGRLP+NVAAGMEELY NY+NAV
Sbjct: 101 ARSEQDLLSGIKKEAEAGRLPANVAAGMEELYWNYKNAV 139


>AT1G32200.1 | Symbols: ATS1, ACT1 | ATS1; glycerol-3-phosphate
           O-acyltransferase | chr1:11602223-11605001 REVERSE
          Length = 459

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/39 (79%), Positives = 35/39 (89%)

Query: 8   AGRKNDLLSGIRKEAEAGRLPSNVAAGMEELYQNYRNAV 46
           A  + DLLSGI+KEAEAGRLP+NVAAGMEELY NY+NAV
Sbjct: 101 ARSEQDLLSGIKKEAEAGRLPANVAAGMEELYWNYKNAV 139