Jatropha Genome Database

JcCB0381561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0381561.10 - phase: 0 /partial
         (163 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G43360.1 | Symbols: BIO2, BIOB | BIO2 (BIOTIN AUXOTROPH 2); b...   247   2e-66

>AT2G43360.1 | Symbols: BIO2, BIOB | BIO2 (BIOTIN AUXOTROPH 2);
           biotin synthase | chr2:18010918-18013129 REVERSE
          Length = 378

 Score =  247 bits (631), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 116/163 (71%), Positives = 130/163 (79%)

Query: 1   MFSVRSIFRPQQLRXXXXXXXXXXXXXXXXXXXTQAERTIKEGPRNDWTRHEIKDVYDSP 60
           M  VRS+FR Q                       +AERTI+EGPRNDW+R EIK VYDSP
Sbjct: 1   MMLVRSVFRSQLRPSVSGGLQSASCYSSLSAASAEAERTIREGPRNDWSRDEIKSVYDSP 60

Query: 61  LLDLLFHGAQVHRHAQNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYKTGLKAQKLMTKD 120
           LLDLLFHGAQVHRH  NFREVQQCTLLSIKTGGCSEDCSYCPQSSRY TG+KAQ+LM+KD
Sbjct: 61  LLDLLFHGAQVHRHVHNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYSTGVKAQRLMSKD 120

Query: 121 DVMEAAKRAKEAGSTRFCMGAAWRDTVGRNTNFNQILDYVKEI 163
            V++AAK+AKEAGSTRFCMGAAWRDT+GR TNF+QIL+Y+KEI
Sbjct: 121 AVIDAAKKAKEAGSTRFCMGAAWRDTIGRKTNFSQILEYIKEI 163