Jatropha Genome Database

JcCB0379541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0379541.10 - phase: 1 /partial
         (115 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21630.1 | Symbols: CERK1, LYSM RLK1 | CERK1 (CHITIN ELICITOR...    76   5e-15
AT1G18390.1 | Symbols:  | ATP binding / kinase/ protein kinase/ ...    48   1e-06
AT1G51940.1 | Symbols:  | protein kinase family protein / peptid...    47   2e-06
AT1G25390.1 | Symbols:  | protein kinase family protein | chr1:8...    47   2e-06
AT1G56120.1 | Symbols:  | kinase | chr1:20987288-20993072 REVERSE      47   3e-06
AT1G29720.2 | Symbols:  | protein kinase family protein | chr1:1...    47   3e-06
AT1G18390.2 | Symbols:  | ATP binding / kinase/ protein kinase/ ...    46   4e-06
AT1G16670.1 | Symbols:  | protein kinase family protein | chr1:5...    45   6e-06

>AT3G21630.1 | Symbols: CERK1, LYSM RLK1 | CERK1 (CHITIN ELICITOR
           RECEPTOR KINASE 1); kinase/ receptor signaling protein/
           transmembrane receptor protein kinase |
           chr3:7615543-7618530 REVERSE
          Length = 617

 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 4/96 (4%)

Query: 23  IYVRFYTRKKAKEAILLKKTSPDLSTNAPRSNSDGLVESTGLA---PSSGSTIITLKKPV 79
           +++ +Y  +K K       +S  LST A  ++S  L +S GL     S G   I++ K V
Sbjct: 250 LFIVYYAYRKNKSKGDSFSSSIPLSTKADHASSTSL-QSGGLGGAGVSPGIAAISVDKSV 308

Query: 80  EFSYKELAQATDNFNVANKIGKGGFGSVYYAELRGE 115
           EFS +ELA+ATDNFN++ KIG+GGFG+VYYAELRGE
Sbjct: 309 EFSLEELAKATDNFNLSFKIGQGGFGAVYYAELRGE 344


>AT1G18390.1 | Symbols:  | ATP binding / kinase/ protein kinase/
           protein serine/threonine kinase/ protein tyrosine kinase
           | chr1:6325876-6329935 FORWARD
          Length = 648

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/33 (54%), Positives = 28/33 (84%)

Query: 81  FSYKELAQATDNFNVANKIGKGGFGSVYYAELR 113
           FSY+EL +AT+NF+ + ++G GGFG+VYY +L+
Sbjct: 326 FSYEELEEATNNFDPSKELGDGGFGTVYYGKLK 358


>AT1G51940.1 | Symbols:  | protein kinase family protein /
           peptidoglycan-binding LysM domain-containing protein |
           chr1:19296092-19298941 REVERSE
          Length = 651

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 38/62 (61%)

Query: 54  NSDGLVESTGLAPSSGSTIITLKKPVEFSYKELAQATDNFNVANKIGKGGFGSVYYAELR 113
            ++G  +   +  + G  +  ++KP+ F+Y+E+  ATD F+ +N +G G +GSVY+  LR
Sbjct: 302 QTNGETQVVAIPKALGDGMFEIEKPMVFTYEEIRAATDEFSDSNLLGHGNYGSVYFGLLR 361

Query: 114 GE 115
            +
Sbjct: 362 EQ 363


>AT1G25390.1 | Symbols:  | protein kinase family protein |
           chr1:8906640-8908800 REVERSE
          Length = 629

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)

Query: 73  ITLKKPVEFSYKELAQATDNFNVANKIGKGGFGSVYYAELR 113
           +  K P+ FSYKEL  ATDNF+    +G GGFG+VYY ++R
Sbjct: 272 VFFKIPI-FSYKELQAATDNFSKDRLLGDGGFGTVYYGKVR 311


>AT1G56120.1 | Symbols:  | kinase | chr1:20987288-20993072 REVERSE
          Length = 1047

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 77  KPVEFSYKELAQATDNFNVANKIGKGGFGSVYYAEL 112
           KP  F+Y EL  AT +F+++NK+G+GGFG+VY   L
Sbjct: 694 KPYTFTYSELKNATQDFDLSNKLGEGGFGAVYKGNL 729


>AT1G29720.2 | Symbols:  | protein kinase family protein |
           chr1:10393894-10396326 REVERSE
          Length = 511

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 29/36 (80%)

Query: 77  KPVEFSYKELAQATDNFNVANKIGKGGFGSVYYAEL 112
           + V FS+++L  AT+NF+ ANK+G+GGFGSV+  EL
Sbjct: 149 QTVCFSWRQLQTATNNFDQANKLGEGGFGSVFKGEL 184


>AT1G18390.2 | Symbols:  | ATP binding / kinase/ protein kinase/
           protein serine/threonine kinase/ protein tyrosine kinase
           | chr1:6327463-6329935 FORWARD
          Length = 654

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 28/33 (84%)

Query: 81  FSYKELAQATDNFNVANKIGKGGFGSVYYAELR 113
           FSY+EL +AT+NF+ + ++G GGFG+VYY +L+
Sbjct: 332 FSYEELEEATNNFDPSKELGDGGFGTVYYGKLK 364


>AT1G16670.1 | Symbols:  | protein kinase family protein |
           chr1:5697846-5699492 FORWARD
          Length = 390

 Score = 45.4 bits (106), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 24/28 (85%)

Query: 81  FSYKELAQATDNFNVANKIGKGGFGSVY 108
           + Y+E+ QATD+F+  NKIG+GGFGSVY
Sbjct: 29  YKYREIRQATDDFSAENKIGEGGFGSVY 56