Jatropha Genome Database

JcCB0376261.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0376261.10 + phase: 1 /partial
         (203 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17050.1 | Symbols: UGLYAH | UGLYAH (UREIDOGLYCINE AMINOHYDRO...   237   4e-63

>AT4G17050.1 | Symbols: UGLYAH | UGLYAH (UREIDOGLYCINE
           AMINOHYDROLASE); transcription factor |
           chr4:9589662-9592413 FORWARD
          Length = 298

 Score =  237 bits (604), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 120/166 (72%), Positives = 129/166 (77%), Gaps = 2/166 (1%)

Query: 1   LPGFTRSVYKSDHALITPESHVFSPLP--TNTLGAYLITPAMGSHFVMYLAKMQGKSRSE 58
           LPGFTRSVYK DHALITPESHV+SPLP  TNTLGAYLITPA GSHFVMYLAKM+  S S 
Sbjct: 57  LPGFTRSVYKRDHALITPESHVYSPLPDWTNTLGAYLITPATGSHFVMYLAKMKEMSSSG 116

Query: 59  LPPYDVERFIFMVQGXXXXXXXXXXXHELMVDSYAYLPPNFKHSLECDAFATLVVFERRY 118
           LPP D+ER IF+V+G            +L VDSYAYLPPNF HSL+C   ATLVVFERRY
Sbjct: 117 LPPQDIERLIFVVEGAVTLTNTSSSSKKLTVDSYAYLPPNFHHSLDCVESATLVVFERRY 176

Query: 119 ASLDDLITEQIVGSTDKQPLLETPGEVFELRKLLPQTLPYDFNIHV 164
             L    TE IVGSTDKQPLLETPGEVFELRKLLP ++ YDFNIH 
Sbjct: 177 EYLGSHTTELIVGSTDKQPLLETPGEVFELRKLLPMSVAYDFNIHT 222