Jatropha Genome Database
- JcCB0376161.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0376161.10 + phase: 1 /pseudo/partial
(180 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30620.3 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4); UDP-ar... 313 4e-86
AT1G30620.2 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4); UDP-ar... 313 4e-86
AT1G30620.1 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4); UDP-ar... 313 4e-86
AT2G34850.1 | Symbols: MEE25 | MEE25 (maternal effect embryo arr... 306 4e-84
AT4G20460.2 | Symbols: | NAD-dependent epimerase/dehydratase fa... 305 8e-84
AT4G20460.1 | Symbols: | NAD-dependent epimerase/dehydratase fa... 305 9e-84
AT5G44480.1 | Symbols: DUR | DUR (DEFECTIVE UGE IN ROOT); UDP-gl... 305 1e-83
AT1G64440.1 | Symbols: RHD1, REB1, UGE4 | RHD1 (ROOT HAIR DEFECT... 122 9e-29
AT4G10960.1 | Symbols: UGE5 | UGE5 (UDP-D-glucose/UDP-D-galactos... 112 1e-25
AT4G23920.1 | Symbols: UGE2 | UGE2 (UDP-D-glucose/UDP-D-galactos... 109 9e-25
AT1G12780.1 | Symbols: UGE1 | UGE1 (UDP-D-glucose/UDP-D-galactos... 106 9e-24
AT1G63180.1 | Symbols: UGE3 | UGE3 (UDP-D-glucose/UDP-D-galactos... 104 2e-23
>AT1G30620.3 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4);
UDP-arabinose 4-epimerase/ catalytic |
chr1:10855496-10857970 FORWARD
Length = 418
Score = 313 bits (802), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 143/168 (85%), Positives = 157/168 (93%)
Query: 6 MISRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTC 65
MI RYFNVIGSDP+GRLGEAPRPELREHGRISGACFDAARGI+ GL++KGTDYKT DGTC
Sbjct: 242 MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGTC 301
Query: 66 IRDYIDVTDLVDAHVKALERALPRKVGIYNVGTGKGRSVNEFVEACKKATGVNIKVDYLP 125
+RDYIDVTDLVDAHVKAL++A PRKVGIYNVGTGKG SV EFVEACKKATGV IK+DYLP
Sbjct: 302 VRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYLP 361
Query: 126 RRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGYG 173
RR GDYAEV+SDP+KIR ELNWTA+HT+L+ESL+ AWRWQK HRNGYG
Sbjct: 362 RRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGYG 409
>AT1G30620.2 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4);
UDP-arabinose 4-epimerase/ catalytic |
chr1:10855496-10857970 FORWARD
Length = 419
Score = 313 bits (802), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 143/168 (85%), Positives = 157/168 (93%)
Query: 6 MISRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTC 65
MI RYFNVIGSDP+GRLGEAPRPELREHGRISGACFDAARGI+ GL++KGTDYKT DGTC
Sbjct: 243 MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGTC 302
Query: 66 IRDYIDVTDLVDAHVKALERALPRKVGIYNVGTGKGRSVNEFVEACKKATGVNIKVDYLP 125
+RDYIDVTDLVDAHVKAL++A PRKVGIYNVGTGKG SV EFVEACKKATGV IK+DYLP
Sbjct: 303 VRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYLP 362
Query: 126 RRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGYG 173
RR GDYAEV+SDP+KIR ELNWTA+HT+L+ESL+ AWRWQK HRNGYG
Sbjct: 363 RRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGYG 410
>AT1G30620.1 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4);
UDP-arabinose 4-epimerase/ catalytic |
chr1:10855496-10857970 FORWARD
Length = 419
Score = 313 bits (802), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 143/168 (85%), Positives = 157/168 (93%)
Query: 6 MISRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTC 65
MI RYFNVIGSDP+GRLGEAPRPELREHGRISGACFDAARGI+ GL++KGTDYKT DGTC
Sbjct: 243 MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGTC 302
Query: 66 IRDYIDVTDLVDAHVKALERALPRKVGIYNVGTGKGRSVNEFVEACKKATGVNIKVDYLP 125
+RDYIDVTDLVDAHVKAL++A PRKVGIYNVGTGKG SV EFVEACKKATGV IK+DYLP
Sbjct: 303 VRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYLP 362
Query: 126 RRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGYG 173
RR GDYAEV+SDP+KIR ELNWTA+HT+L+ESL+ AWRWQK HRNGYG
Sbjct: 363 RRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGYG 410
>AT2G34850.1 | Symbols: MEE25 | MEE25 (maternal effect embryo arrest
25); UDP-glucose 4-epimerase/ binding / catalytic/
coenzyme binding | chr2:14704792-14705768 REVERSE
Length = 236
Score = 306 bits (785), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 143/175 (81%), Positives = 161/175 (92%)
Query: 6 MISRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTC 65
MI RYFNVIGSDP+GRLGEAPRPEL EHGRISGACFDAARGII GL++KGTDYKT DGTC
Sbjct: 61 MILRYFNVIGSDPEGRLGEAPRPELSEHGRISGACFDAARGIIPGLQIKGTDYKTVDGTC 120
Query: 66 IRDYIDVTDLVDAHVKALERALPRKVGIYNVGTGKGRSVNEFVEACKKATGVNIKVDYLP 125
+RDYIDVTDLVDAHVKALE+A PRKVGI+NVGTGKG SV EFVEACKKATGV+IKVDYL
Sbjct: 121 VRDYIDVTDLVDAHVKALEKAKPRKVGIFNVGTGKGSSVKEFVEACKKATGVDIKVDYLE 180
Query: 126 RRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGYGSPLVMAS 180
RR GDYAEV+SDP KI+ ELNWTA+HT+LQESL++AWRWQK HR+GYGS ++++
Sbjct: 181 RRAGDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKLHRSGYGSSSLVSA 235
>AT4G20460.2 | Symbols: | NAD-dependent epimerase/dehydratase
family protein | chr4:11029767-11031765 REVERSE
Length = 411
Score = 305 bits (782), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 139/169 (82%), Positives = 158/169 (93%)
Query: 6 MISRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTC 65
MI RYFNVIGSDP+GRLGEAP+PELREHGRISGACFDAARG+I GL+VKGTDYKT DGTC
Sbjct: 242 MILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAARGVIPGLQVKGTDYKTGDGTC 301
Query: 66 IRDYIDVTDLVDAHVKALERALPRKVGIYNVGTGKGRSVNEFVEACKKATGVNIKVDYLP 125
+RDYIDVTDLVDAHVKALE+A PR VGIYNVGTGKGRSV EFVEACKKATGV+IKVD+LP
Sbjct: 302 VRDYIDVTDLVDAHVKALEKAKPRNVGIYNVGTGKGRSVKEFVEACKKATGVDIKVDFLP 361
Query: 126 RRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGYGS 174
RRPGDYAEV+SDP KI +LNW+A++T+LQESL++AW+WQK+H +GY S
Sbjct: 362 RRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKTHPHGYAS 410
>AT4G20460.1 | Symbols: | NAD-dependent epimerase/dehydratase
family protein | chr4:11029767-11031572 REVERSE
Length = 379
Score = 305 bits (781), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 139/169 (82%), Positives = 158/169 (93%)
Query: 6 MISRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTC 65
MI RYFNVIGSDP+GRLGEAP+PELREHGRISGACFDAARG+I GL+VKGTDYKT DGTC
Sbjct: 210 MILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAARGVIPGLQVKGTDYKTGDGTC 269
Query: 66 IRDYIDVTDLVDAHVKALERALPRKVGIYNVGTGKGRSVNEFVEACKKATGVNIKVDYLP 125
+RDYIDVTDLVDAHVKALE+A PR VGIYNVGTGKGRSV EFVEACKKATGV+IKVD+LP
Sbjct: 270 VRDYIDVTDLVDAHVKALEKAKPRNVGIYNVGTGKGRSVKEFVEACKKATGVDIKVDFLP 329
Query: 126 RRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGYGS 174
RRPGDYAEV+SDP KI +LNW+A++T+LQESL++AW+WQK+H +GY S
Sbjct: 330 RRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKTHPHGYAS 378
>AT5G44480.1 | Symbols: DUR | DUR (DEFECTIVE UGE IN ROOT);
UDP-glucose 4-epimerase/ binding / catalytic/ coenzyme
binding | chr5:17921515-17923643 FORWARD
Length = 436
Score = 305 bits (781), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 144/169 (85%), Positives = 154/169 (91%)
Query: 6 MISRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTC 65
MI RYFNVIGSDP GRLGEAPRPELRE GRISGACFDAARG I GL+VKGTDYKT DGTC
Sbjct: 267 MILRYFNVIGSDPGGRLGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKTSDGTC 326
Query: 66 IRDYIDVTDLVDAHVKALERALPRKVGIYNVGTGKGRSVNEFVEACKKATGVNIKVDYLP 125
IRDYIDVTDLVDAHVKALE+A PRKVGIYNVGTGKGRSV EFVEACKKATGV IKVD+LP
Sbjct: 327 IRDYIDVTDLVDAHVKALEKAQPRKVGIYNVGTGKGRSVKEFVEACKKATGVEIKVDFLP 386
Query: 126 RRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGYGS 174
RRPGDYAEV+SDPTKI +LNWTA+ T+LQ+SLQ+AWRWQK H +GY S
Sbjct: 387 RRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKIHPHGYNS 435
>AT1G64440.1 | Symbols: RHD1, REB1, UGE4 | RHD1 (ROOT HAIR DEFECTIVE
1); UDP-glucose 4-epimerase/ protein dimerization |
chr1:23937102-23939565 FORWARD
Length = 348
Score = 122 bits (307), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 98/171 (57%), Gaps = 6/171 (3%)
Query: 6 MISRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTC 65
++ RYFN +G+ P GR+GE P + G + LK+ GTDY T DGT
Sbjct: 177 IMLRYFNPVGAHPSGRIGEDP---CGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTG 233
Query: 66 IRDYIDVTDLVDAHVKALERALPRKVG--IYNVGTGKGRSVNEFVEACKKATGVNIKVDY 123
+RDYI V DL D H+ AL++ ++G +YN+GTGKG +V E V+A +KA+G+ I +
Sbjct: 234 VRDYIHVVDLADGHICALQKLDDTEIGCEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVK 293
Query: 124 LPRRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGYGS 174
+ RRPGD V++ K ELNW A ++E + W W ++ GYGS
Sbjct: 294 VGRRPGDAETVYASTEKAERELNWKANF-GIEEMCRDQWNWASNNPFGYGS 343
>AT4G10960.1 | Symbols: UGE5 | UGE5 (UDP-D-glucose/UDP-D-galactose
4-epimerase 5); UDP-glucose 4-epimerase/ protein
dimerization | chr4:6716083-6718472 REVERSE
Length = 351
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 94/173 (54%), Gaps = 10/173 (5%)
Query: 6 MISRYFNVIGSDPDGRLGEAPR--PELREHGRISGACFDAARGIISGLKVKGTDYKTHDG 63
++ RYFN +G+ P G +GE PR P + A G L V G DY T DG
Sbjct: 178 ILLRYFNPVGAHPSGDIGEDPRGIPN-----NLMPFVQQVAVGRRPHLTVFGNDYNTKDG 232
Query: 64 TCIRDYIDVTDLVDAHVKALERALPRKVG--IYNVGTGKGRSVNEFVEACKKATGVNIKV 121
T +RDYI V DL D H+ AL + K+G +YN+GTG G SV E V+A +KA+G I +
Sbjct: 233 TGVRDYIHVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIPL 292
Query: 122 DYLPRRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGYGS 174
RRPGD V++ + ELNW A++ ++E + W W ++ GY S
Sbjct: 293 VIAGRRPGDAEVVYASTERAESELNWKAKY-GIEEMCRDLWNWASNNPYGYDS 344
>AT4G23920.1 | Symbols: UGE2 | UGE2 (UDP-D-glucose/UDP-D-galactose
4-epimerase 2); UDP-glucose 4-epimerase/ protein
dimerization | chr4:12431416-12433666 FORWARD
Length = 350
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 90/165 (54%), Gaps = 6/165 (3%)
Query: 6 MISRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTC 65
++ RYFN +G+ P G +GE P L + A G L V GTDYKT DGT
Sbjct: 177 ILLRYFNPVGAHPSGYIGEDP---LGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTG 233
Query: 66 IRDYIDVTDLVDAHVKALERALPRKVG--IYNVGTGKGRSVNEFVEACKKATGVNIKVDY 123
+RDYI V DL D H+ AL + K+ +YN+GTG G SV E V A +KA+G I +
Sbjct: 234 VRDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVM 293
Query: 124 LPRRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSH 168
RRPGD V++ K ELNW A++ ++E + W W ++
Sbjct: 294 AGRRPGDAEVVYASTEKAERELNWKAKN-GIEEMCRDLWNWASNN 337
>AT1G12780.1 | Symbols: UGE1 | UGE1 (UDP-D-glucose/UDP-D-galactose
4-epimerase 1); UDP-glucose 4-epimerase/ protein
dimerization | chr1:4356124-4358120 REVERSE
Length = 351
Score = 106 bits (264), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 95/181 (52%), Gaps = 21/181 (11%)
Query: 6 MISRYFNVIGSDPDGRLGEAPR-------PELREHGRISGACFDAARGIISGLKVKGTDY 58
++ RYFN +G+ G +GE P+ P +++ A G + L V G DY
Sbjct: 182 ILLRYFNPVGAHESGSIGEDPKGIPNNLMPYIQQ----------VAVGRLPELNVYGHDY 231
Query: 59 KTHDGTCIRDYIDVTDLVDAHVKALERALPR-KVGI--YNVGTGKGRSVNEFVEACKKAT 115
T DG+ +RDYI V DL D H+ AL + K+G YN+GTG+G SV E V A +KA+
Sbjct: 232 PTEDGSAVRDYIHVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKAS 291
Query: 116 GVNIKVDYLPRRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGYGSP 175
G I + PRR GD V++ K EL W A++ + E + W+W ++ GY +
Sbjct: 292 GKKIPIKLCPRRSGDATAVYASTEKAEKELGWKAKY-GVDEMCRDQWKWANNNPWGYQNK 350
Query: 176 L 176
L
Sbjct: 351 L 351
>AT1G63180.1 | Symbols: UGE3 | UGE3 (UDP-D-glucose/UDP-D-galactose
4-epimerase 3); UDP-glucose 4-epimerase/ protein
dimerization | chr1:23427559-23429384 REVERSE
Length = 351
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 6 MISRYFNVIGSDPDGRLGEAPR-------PELREHGRISGACFDAARGIISGLKVKGTDY 58
++ RYFN +G+ GR+GE P+ P +++ A G + L V G DY
Sbjct: 182 ILLRYFNPVGAHESGRIGEDPKGIPNNLMPYIQQ----------VAVGRLPELNVFGHDY 231
Query: 59 KTHDGTCIRDYIDVTDLVDAHVKALERALP-RKVGI--YNVGTGKGRSVNEFVEACKKAT 115
T DG+ +RDYI V DL D HV AL + K+G YN+GTG+G SV E V + +KA+
Sbjct: 232 PTMDGSAVRDYIHVMDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKAS 291
Query: 116 GVNIKVDYLPRRPGDYAEVFSDPTKIRLELNWTAQHTDLQESLQIAWRWQKSHRNGY 172
G I + PRR GD V++ K EL W A++ + E + W W + G+
Sbjct: 292 GKKIPIKLCPRRAGDATAVYASTQKAEKELGWKAKY-GVDEMCRDQWNWANKNPWGF 347