Jatropha Genome Database

JcCB0372411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0372411.10 + phase: 0 /pseudo/partial
         (170 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G04955.1 | Symbols: ATALN | ATALN (Arabidopsis allantoinase);...   224   3e-59

>AT4G04955.1 | Symbols: ATALN | ATALN (Arabidopsis allantoinase);
           allantoinase/ hydrolase | chr4:2522301-2525259 REVERSE
          Length = 506

 Score =  224 bits (570), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 108/149 (72%), Positives = 128/149 (85%), Gaps = 1/149 (0%)

Query: 18  YQEIQQDSENYTEDAENDPRHYSTYLKTRPPSWEEAAIRDLVTLSKDTRIGGPAEGAHLH 77
           + EI++D E   + +ENDPR Y TYLKTRP SWEE AIR+L++++++TRIGG AEGAHLH
Sbjct: 231 HAEIERDLE-IEDGSENDPRSYLTYLKTRPTSWEEGAIRNLLSVTENTRIGGSAEGAHLH 289

Query: 78  IVHLSDSGSSLQLIKLAKRSGDSVTVETCPHYLAFSAEEIKDGDTRFKCAPPIRDSANKE 137
           IVHLSD+ SSL LIK AK  GDSVTVETCPHYLAFSAEEI +GDTRFKC+PPIRD+AN+E
Sbjct: 290 IVHLSDASSSLDLIKEAKGKGDSVTVETCPHYLAFSAEEIPEGDTRFKCSPPIRDAANRE 349

Query: 138 ALWKALLGGDIDMLSSDHSPTVPELKLFN 166
            LW+AL+ GDIDMLSSDHSPT PELKL +
Sbjct: 350 KLWEALMEGDIDMLSSDHSPTKPELKLMS 378