Jatropha Genome Database

JcCB0371021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0371021.10 + phase: 0 
         (317 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09240.1 | Symbols: NAS3, ATNAS3 | NAS3 (NICOTIANAMINE SYNTHA...   375   e-104
AT1G56430.1 | Symbols: ATNAS4, NAS4 | NAS4 (NICOTIANAMINE SYNTHA...   373   e-104
AT5G04950.1 | Symbols: NAS1, ATNAS1 | NAS1 (NICOTIANAMINE SYNTHA...   361   e-100
AT5G56080.1 | Symbols: ATNAS2, NAS2 | NAS2 (NICOTIANAMINE SYNTHA...   350   6e-97

>AT1G09240.1 | Symbols: NAS3, ATNAS3 | NAS3 (NICOTIANAMINE SYNTHASE
           3); nicotianamine synthase | chr1:2984950-2985912
           FORWARD
          Length = 320

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/297 (61%), Positives = 241/297 (81%), Gaps = 6/297 (2%)

Query: 1   MGCQEQLVIEKVCEIYEKISGLESLTPSKNVNYLFTQLVHICIP-QCQIDVTKLSEKVQE 59
           MGCQ++ +++ +C++YEKIS LESL PS++VN LF QLV  CIP    IDVTK+ ++VQE
Sbjct: 1   MGCQDEQLVQTICDLYEKISKLESLKPSEDVNILFKQLVSTCIPPNPNIDVTKMCDRVQE 60

Query: 60  IRSELIKLCGQAEGLLESHFSTIIGSH-ENPLHHVRLFPYYSNYLKLSQLEFSMLSKNCT 118
           IR  LIK+CG AEG LE+HFS+I+ S+ +NPLHH+ +FPYY+NYLKL +LEF +L +N  
Sbjct: 61  IRLNLIKICGLAEGHLENHFSSILTSYQDNPLHHLNIFPYYNNYLKLGKLEFDLLEQNLN 120

Query: 119 Q-IPNHVAFVGSGPLPLTSIILATDHLRTTYFHNYDIDPSANSKALQLVSSDPNLSKRMF 177
             +P  VAF+GSGPLPLTSI+LA+ HL+ T FHN+DIDPSANS A  LVSSDP++S+RMF
Sbjct: 121 GFVPKSVAFIGSGPLPLTSIVLASFHLKDTIFHNFDIDPSANSLASLLVSSDPDISQRMF 180

Query: 178 SHNADIMNVSSSLKEYEVIFLAALVGMDKEEKVQVINHLAEHMAPGAILLLRSAHGARAF 237
            H  DIM+V+ SLK ++V+FLAALVGM+KEEKV+VI HL +HMAPGA+L+LRSAHG RAF
Sbjct: 181 FHTVDIMDVTESLKSFDVVFLAALVGMNKEEKVKVIEHLQKHMAPGAVLMLRSAHGPRAF 240

Query: 238 MYPVVDPQDLQGFEVLSVFHPTDEVINSVIIARKFSRPIHSL-NQGLSSALLSSKCS 293
           +YP+V+P DLQGFEVLS++HPTD+VINSV+I++K   P+ S+ N G  ++ L   C+
Sbjct: 241 LYPIVEPCDLQGFEVLSIYHPTDDVINSVVISKK--HPVVSIGNVGGPNSCLLKPCN 295


>AT1G56430.1 | Symbols: ATNAS4, NAS4 | NAS4 (NICOTIANAMINE SYNTHASE
           4); nicotianamine synthase | chr1:21137023-21137997
           FORWARD
          Length = 324

 Score =  373 bits (958), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/312 (58%), Positives = 243/312 (77%), Gaps = 6/312 (1%)

Query: 1   MG-CQEQLVIEKVCEIYEKISGLESLTPSKNVNYLFTQLVHICIP-QCQIDVTKLSEKVQ 58
           MG CQ+  ++ K+C++YEKIS LE+L P ++V+ LF QLV  CIP    IDVTK+SE +Q
Sbjct: 1   MGYCQDDQLVNKICDLYEKISKLETLKPCEDVDTLFKQLVSTCIPPNPNIDVTKMSENIQ 60

Query: 59  EIRSELIKLCGQAEGLLESHFSTIIGSHE-NPLHHVRLFPYYSNYLKLSQLEFSMLSKNC 117
           E+RS LIK+CG+AEG LE HFS+I+ S E NPLHH+ LFPYY+NYLKLS+LEF +L +N 
Sbjct: 61  EMRSNLIKICGEAEGYLEHHFSSILTSFEDNPLHHLNLFPYYNNYLKLSKLEFDLLEQNL 120

Query: 118 TQ-IPNHVAFVGSGPLPLTSIILATDHLRTTYFHNYDIDPSANSKALQLVSSDPNLSKRM 176
              +P  VAF+GSGPLPLTS++LA+ HL+ + FHN+DIDPSAN  A +LVSSDP+LS+RM
Sbjct: 121 NGFVPRTVAFIGSGPLPLTSVVLASSHLKDSIFHNFDIDPSANMVAARLVSSDPDLSQRM 180

Query: 177 FSHNADIMNVSSSLKEYEVIFLAALVGMDKEEKVQVINHLAEHMAPGAILLLRSAHGARA 236
           F H  DIM+V+ SLK ++V+FLAALVGMDK+EKV+V+ HL +HM+PGA+L+LRSAHG RA
Sbjct: 181 FFHTVDIMDVTESLKGFDVVFLAALVGMDKKEKVKVVEHLEKHMSPGALLMLRSAHGPRA 240

Query: 237 FMYPVVDPQDLQGFEVLSVFHPTDEVINSVIIARKFSRPIHSL--NQGLSSALLSSKCSD 294
           F+YP+V+P DL+GFEVLSV+HPTDEVINS++I+RK     + +  +    ++ L+  CS 
Sbjct: 241 FLYPIVEPCDLEGFEVLSVYHPTDEVINSIVISRKLGEDANGVVHDHIDQASDLACNCSK 300

Query: 295 IQGFNHKTYSNI 306
           I    +K  S I
Sbjct: 301 IHVIMNKKKSII 312


>AT5G04950.1 | Symbols: NAS1, ATNAS1 | NAS1 (NICOTIANAMINE SYNTHASE
           1); nicotianamine synthase | chr5:1457876-1458838
           REVERSE
          Length = 320

 Score =  361 bits (926), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/317 (53%), Positives = 232/317 (73%), Gaps = 6/317 (1%)

Query: 1   MGCQEQLVIEKVCEIYEKISGLESLTPSKNVNYLFTQLVHICIP-QCQIDVTKLSEKVQE 59
           M CQ  LV++++ ++Y++IS L+SL PSKNV+ LF QLV  C+P    IDVT + E+V++
Sbjct: 1   MACQNNLVVKQIIDLYDQISKLKSLKPSKNVDTLFGQLVSTCLPTDTNIDVTNMCEEVKD 60

Query: 60  IRSELIKLCGQAEGLLESHFSTIIGS---HENPLHHVRLFPYYSNYLKLSQLEFSMLSKN 116
           +R+ LIKLCG+AEG LE HFSTI+GS    +NPL H+ +FPYYSNYLKL +LEF +LS++
Sbjct: 61  MRANLIKLCGEAEGYLEQHFSTILGSLQEDQNPLDHLHIFPYYSNYLKLGKLEFDLLSQH 120

Query: 117 CTQIPNHVAFVGSGPLPLTSIILATDHLRTTYFHNYDIDPSANSKALQLVSSDPNLSKRM 176
            + +P  +AFVGSGP+PLTSI+LA  HL  T FHN+DID  AN+ A  LVS DP+LSKRM
Sbjct: 121 SSHVPTKIAFVGSGPMPLTSIVLAKFHLPNTTFHNFDIDSHANTLASNLVSRDPDLSKRM 180

Query: 177 FSHNADIMNVSSSLKEYEVIFLAALVGMDKEEKVQVINHLAEHMAPGAILLLRSAHGARA 236
             H  D++N +  L +Y+V+FLAALVGMDKE KV+ I HL +HMAPGA+L+LRSAH  RA
Sbjct: 181 IFHTTDVLNATEGLDQYDVVFLAALVGMDKESKVKAIEHLEKHMAPGAVLMLRSAHALRA 240

Query: 237 FMYPVVDPQDLQGFEVLSVFHPTDEVINSVIIARKFSRPIH-SLNQGLSSALLSSKCSDI 295
           F+YP+VD  DL+GF++L+++HPTD+V+NSV+IARK   P    +N       +   CS I
Sbjct: 241 FLYPIVDSSDLKGFQLLTIYHPTDDVVNSVVIARKLGGPTTPGVNGTRGCMFMPCNCSKI 300

Query: 296 QG-FNHKTYSNIIGELT 311
               N++   N+I E +
Sbjct: 301 HAIMNNRGKKNMIEEFS 317


>AT5G56080.1 | Symbols: ATNAS2, NAS2 | NAS2 (NICOTIANAMINE SYNTHASE
           2); nicotianamine synthase | chr5:22711402-22712364
           REVERSE
          Length = 320

 Score =  350 bits (899), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 164/276 (59%), Positives = 216/276 (78%), Gaps = 3/276 (1%)

Query: 1   MGCQEQLVIEKVCEIYEKISGLESLTPSKNVNYLFTQLVHICIP-QCQIDVTKL-SEKVQ 58
           M C+  LV++++ ++Y +IS LESL PSKNV+ LF QLV  C+P    IDVT++  EKV+
Sbjct: 1   MACENNLVVKQIMDLYNQISNLESLKPSKNVDTLFRQLVSTCLPTDTNIDVTEIHDEKVK 60

Query: 59  EIRSELIKLCGQAEGLLESHFSTIIGSHE-NPLHHVRLFPYYSNYLKLSQLEFSMLSKNC 117
           ++RS LIKLCG+AEG LE HFS I+GS E NPL+H+ +FPYY+NYLKL +LEF +LS++ 
Sbjct: 61  DMRSHLIKLCGEAEGYLEQHFSAILGSFEDNPLNHLHIFPYYNNYLKLGKLEFDLLSQHT 120

Query: 118 TQIPNHVAFVGSGPLPLTSIILATDHLRTTYFHNYDIDPSANSKALQLVSSDPNLSKRMF 177
           T +P  VAF+GSGP+PLTSI+LA  HL  T FHN+DID  AN+ A  LVS D +LSKRM 
Sbjct: 121 THVPTKVAFIGSGPMPLTSIVLAKFHLPNTTFHNFDIDSHANTLASNLVSRDSDLSKRMI 180

Query: 178 SHNADIMNVSSSLKEYEVIFLAALVGMDKEEKVQVINHLAEHMAPGAILLLRSAHGARAF 237
            H  D++N    L +Y+V+FLAALVGMDKE KV+ I HL +HMAPGA+++LRSAHG RAF
Sbjct: 181 FHTTDVLNAKEGLDQYDVVFLAALVGMDKESKVKAIEHLEKHMAPGAVVMLRSAHGLRAF 240

Query: 238 MYPVVDPQDLQGFEVLSVFHPTDEVINSVIIARKFS 273
           +YP+VD  DL+GFEVL+++HP+D+V+NSV+IARK  
Sbjct: 241 LYPIVDSCDLKGFEVLTIYHPSDDVVNSVVIARKLG 276