Jatropha Genome Database

JcCB0370211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0370211.10 + phase: 0 /partial
         (162 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00570.1 | Symbols:  | malate oxidoreductase, putative | chr4...   244   2e-65
AT2G13560.1 | Symbols:  | malate oxidoreductase, putative | chr2...   183   3e-47
AT2G19900.1 | Symbols: ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzym...    87   4e-18
AT5G25880.1 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-malic enzym...    85   2e-17
AT5G11670.1 | Symbols: ATNADP-ME2 | ATNADP-ME2 (NADP-malic enzym...    82   1e-16
AT1G79750.1 | Symbols: ATNADP-ME4 | ATNADP-ME4 (NADP-malic enzym...    81   3e-16

>AT4G00570.1 | Symbols:  | malate oxidoreductase, putative |
           chr4:242817-246522 REVERSE
          Length = 607

 Score =  244 bits (623), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 116/150 (77%), Positives = 127/150 (84%)

Query: 13  GLSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQY 72
           G  R FSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTE             V++  QQ 
Sbjct: 20  GSRRCFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVMTCVQQC 79

Query: 73  ARFRESYRSLEKNTQGQPDSVVSLAKWRILNRLPDRNETLYYRVLIDNIKNFAPIIYTPT 132
            RF ES+RSLE NT+G+P++VV+LAKWR+LNRL DRNETLYYRVLIDNIK+FAPIIYTPT
Sbjct: 80  DRFIESFRSLENNTKGEPENVVALAKWRMLNRLHDRNETLYYRVLIDNIKDFAPIIYTPT 139

Query: 133 VGLVCQNYSGLFRRPRGMYFSAKDKGEMMS 162
           VGLVCQNYSGL+RRPRGMYFSAKDKGEMMS
Sbjct: 140 VGLVCQNYSGLYRRPRGMYFSAKDKGEMMS 169


>AT2G13560.1 | Symbols:  | malate oxidoreductase, putative |
           chr2:5650089-5655103 FORWARD
          Length = 623

 Score =  183 bits (465), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 86/138 (62%), Positives = 101/138 (73%)

Query: 25  PCIVHKRGADILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFRESYRSLEK 84
           P IVHK+G DILHDPWFNK T F +TE             V+  EQQ  RF    + LE+
Sbjct: 39  PTIVHKQGLDILHDPWFNKGTAFTMTERNRLDLRGLLPPNVMDSEQQIFRFMTDLKRLEE 98

Query: 85  NTQGQPDSVVSLAKWRILNRLPDRNETLYYRVLIDNIKNFAPIIYTPTVGLVCQNYSGLF 144
             +  P    +LAKWRILNRL DRNET+YY+VLI+NI+ +API+YTPTVGLVCQNYSGLF
Sbjct: 99  QARDGPSDPNALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVGLVCQNYSGLF 158

Query: 145 RRPRGMYFSAKDKGEMMS 162
           RRPRGMYFSA+D+GEMMS
Sbjct: 159 RRPRGMYFSAEDRGEMMS 176


>AT2G19900.1 | Symbols: ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzyme
           1); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr2:8592106-8595403
           REVERSE
          Length = 581

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 10/130 (7%)

Query: 32  GADILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFRESYRSLEKNTQGQPD 91
           G  +L DP +NK   F   E             V+  + Q  R   + R  +        
Sbjct: 42  GYSLLRDPRYNKGLAFTEKERDTHYLRGLLPPVVLDQKLQEKRLLNNIRQYQ-------- 93

Query: 92  SVVSLAKWRILNRLPDRNETLYYRVLIDNIKNFAPIIYTPTVGLVCQNYSGLFRRPRGMY 151
               L K+  L  L +RNE L+Y++LIDN++   PI+YTPTVG  CQ +  +FRRP+G++
Sbjct: 94  --FPLQKYMALTELQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKFGSIFRRPQGLF 151

Query: 152 FSAKDKGEMM 161
            S KDKG+++
Sbjct: 152 ISLKDKGKIL 161


>AT5G25880.1 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-malic enzyme
           3); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr5:9024549-9028260
           FORWARD
          Length = 588

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 10/130 (7%)

Query: 32  GADILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFRESYRSLEKNTQGQPD 91
           G  ++ DP +NK   F   E             V+S + Q  +   + R           
Sbjct: 49  GYTLMRDPRYNKGLAFTDKERDAHYITGLLPPVVLSQDVQERKVMHNLRQY--------- 99

Query: 92  SVVSLAKWRILNRLPDRNETLYYRVLIDNIKNFAPIIYTPTVGLVCQNYSGLFRRPRGMY 151
             V L ++  L  L +RNE L+Y++LIDN++   P++YTPTVG  CQ Y  ++RRP+G+Y
Sbjct: 100 -TVPLQRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLY 158

Query: 152 FSAKDKGEMM 161
            S K+KG+++
Sbjct: 159 ISLKEKGKIL 168


>AT5G11670.1 | Symbols: ATNADP-ME2 | ATNADP-ME2 (NADP-malic enzyme
           2); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr5:3754456-3758040
           FORWARD
          Length = 588

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 10/130 (7%)

Query: 32  GADILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFRESYRSLEKNTQGQPD 91
           G  ++ DP +NK   F   E             ++S + Q  +   + R           
Sbjct: 49  GYTLMRDPRYNKGLAFTDKERDAHYLTGLLPPVILSQDVQERKVMHNLRQY--------- 99

Query: 92  SVVSLAKWRILNRLPDRNETLYYRVLIDNIKNFAPIIYTPTVGLVCQNYSGLFRRPRGMY 151
             V L ++  L  L +RNE L+Y++LIDN++   P++YTPTVG  CQ Y  +FR+P+G+Y
Sbjct: 100 -TVPLQRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRKPQGLY 158

Query: 152 FSAKDKGEMM 161
            S  +KG+++
Sbjct: 159 ISLNEKGKIL 168


>AT1G79750.1 | Symbols: ATNADP-ME4 | ATNADP-ME4 (NADP-malic enzyme
           4); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr1:30007655-30011179
           REVERSE
          Length = 646

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 10/129 (7%)

Query: 32  GADILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFRESYRSLEKNTQGQPD 91
           G  +L DP  NK   F   E             VIS + Q  +   + R  +        
Sbjct: 107 GYTLLRDPHHNKGLAFSHRERDAHYLRGLLPPTVISQDLQVKKIMHTLRQYQ-------- 158

Query: 92  SVVSLAKWRILNRLPDRNETLYYRVLIDNIKNFAPIIYTPTVGLVCQNYSGLFRRPRGMY 151
             V L K+  +  L + NE L+Y++LID+++   P+IYTPTVG  CQ Y  +F RP+G++
Sbjct: 159 --VPLQKYMAMMDLQETNERLFYKLLIDHVEELLPVIYTPTVGEACQKYGSIFLRPQGLF 216

Query: 152 FSAKDKGEM 160
            S K+KG++
Sbjct: 217 ISLKEKGKI 225