Jatropha Genome Database

JcCB0370021.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0370021.10 - phase: 0 
         (141 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23310.1 | Symbols: FSD3 | FSD3 (FE SUPEROXIDE DISMUTASE 3); ...   142   6e-35
AT4G25100.2 | Symbols: FSD1 | FSD1 (FE SUPEROXIDE DISMUTASE 1); ...    93   6e-20
AT4G25100.3 | Symbols: FSD1 | FSD1 (FE SUPEROXIDE DISMUTASE 1); ...    93   6e-20
AT4G25100.1 | Symbols: FSD1 | FSD1 (FE SUPEROXIDE DISMUTASE 1); ...    93   6e-20
AT5G51100.1 | Symbols: FSD2 | FSD2 (FE SUPEROXIDE DISMUTASE 2); ...    91   2e-19
AT4G25100.4 | Symbols: FSD1 | FSD1 (FE SUPEROXIDE DISMUTASE 1); ...    67   3e-12

>AT5G23310.1 | Symbols: FSD3 | FSD3 (FE SUPEROXIDE DISMUTASE 3);
           superoxide dismutase | chr5:7850624-7852241 FORWARD
          Length = 263

 Score =  142 bits (359), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 65/80 (81%), Positives = 74/80 (92%)

Query: 51  KLFAYYGLKTPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYGYTMEEL 110
           K+ AYYGLKTPPY LDALEPYMS++TLE+HWG++HRGYV+ LNK+L KDD LYGYTMEEL
Sbjct: 45  KVEAYYGLKTPPYPLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEEL 104

Query: 111 IKVTYNNGNPLPQFNNAAQV 130
           IK TYNNGNPLP+FNNAAQV
Sbjct: 105 IKATYNNGNPLPEFNNAAQV 124


>AT4G25100.2 | Symbols: FSD1 | FSD1 (FE SUPEROXIDE DISMUTASE 1);
           copper ion binding / superoxide dismutase |
           chr4:12884649-12886501 REVERSE
          Length = 212

 Score = 92.8 bits (229), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 48  ASPKLFAYYGLKTPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYGYTM 107
           AS  + A Y LK PP+ LDALEP+MSK+TLE HWG++HR YV+ L K++   + L G  +
Sbjct: 3   ASSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPL 61

Query: 108 EELIKVTYNNGNPLPQFNNAAQV 130
           E +I  TYNNG+ LP FNNAAQ 
Sbjct: 62  EHIIHSTYNNGDLLPAFNNAAQA 84


>AT4G25100.3 | Symbols: FSD1 | FSD1 (FE SUPEROXIDE DISMUTASE 1);
           copper ion binding / superoxide dismutase |
           chr4:12884649-12886501 REVERSE
          Length = 212

 Score = 92.8 bits (229), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 48  ASPKLFAYYGLKTPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYGYTM 107
           AS  + A Y LK PP+ LDALEP+MSK+TLE HWG++HR YV+ L K++   + L G  +
Sbjct: 3   ASSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPL 61

Query: 108 EELIKVTYNNGNPLPQFNNAAQV 130
           E +I  TYNNG+ LP FNNAAQ 
Sbjct: 62  EHIIHSTYNNGDLLPAFNNAAQA 84


>AT4G25100.1 | Symbols: FSD1 | FSD1 (FE SUPEROXIDE DISMUTASE 1);
           copper ion binding / superoxide dismutase |
           chr4:12884649-12886501 REVERSE
          Length = 212

 Score = 92.8 bits (229), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 48  ASPKLFAYYGLKTPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYGYTM 107
           AS  + A Y LK PP+ LDALEP+MSK+TLE HWG++HR YV+ L K++   + L G  +
Sbjct: 3   ASSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPL 61

Query: 108 EELIKVTYNNGNPLPQFNNAAQV 130
           E +I  TYNNG+ LP FNNAAQ 
Sbjct: 62  EHIIHSTYNNGDLLPAFNNAAQA 84


>AT5G51100.1 | Symbols: FSD2 | FSD2 (FE SUPEROXIDE DISMUTASE 2);
           superoxide dismutase | chr5:20773357-20775635 REVERSE
          Length = 305

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 7/94 (7%)

Query: 43  NGFRRASPK------LFAYYGLKTPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKEL 96
           NG RR   K      + A + LK PPY LDALEP+MS++TL+ HWG++H+ YVE LNK++
Sbjct: 34  NGKRRLGTKVAVSGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQI 93

Query: 97  AKDDVLYGYTMEELIKVTYNNGNPLPQFNNAAQV 130
              D L   ++EE++ ++YN GN LP FNNAAQ 
Sbjct: 94  LGTD-LDALSLEEVVLLSYNKGNMLPAFNNAAQA 126


>AT4G25100.4 | Symbols: FSD1 | FSD1 (FE SUPEROXIDE DISMUTASE 1);
           copper ion binding / superoxide dismutase |
           chr4:12884649-12885660 REVERSE
          Length = 186

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 1/59 (1%)

Query: 72  MSKKTLEMHWGEYHRGYVEELNKELAKDDVLYGYTMEELIKVTYNNGNPLPQFNNAAQV 130
           MSK+TLE HWG++HR YV+ L K++   + L G  +E +I  TYNNG+ LP FNNAAQ 
Sbjct: 1   MSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLEHIIHSTYNNGDLLPAFNNAAQA 58