Jatropha Genome Database
- JcCB0365851.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0365851.10 + phase: 0
(359 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14096.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 135 5e-32
AT3G59230.1 | Symbols: | F-box family protein | chr3:21896052-2... 128 7e-30
AT4G14103.1 | Symbols: | F-box family protein | chr4:8126948-81... 127 1e-29
AT1G58310.1 | Symbols: | F-box family protein | chr1:21631947-2... 125 3e-29
AT4G00315.1 | Symbols: | F-box family protein | chr4:137404-138... 124 9e-29
AT3G59200.1 | Symbols: | F-box family protein | chr3:21887484-2... 122 3e-28
AT3G59190.1 | Symbols: | F-box family protein | chr3:21884740-2... 118 5e-27
AT4G26340.1 | Symbols: | F-box family protein | chr4:13324130-1... 118 7e-27
AT3G59210.1 | Symbols: | F-box family protein | chr3:21889942-2... 117 9e-27
AT5G38590.1 | Symbols: | F-box family protein | chr5:15452586-1... 115 5e-26
AT5G38590.2 | Symbols: | F-box family protein | chr5:15452066-1... 115 5e-26
AT3G50710.1 | Symbols: | F-box family protein | chr3:18845199-1... 111 7e-25
AT5G56410.1 | Symbols: | F-box family protein | chr5:22848508-2... 110 1e-24
AT3G59240.1 | Symbols: | F-box family protein | chr3:21898682-2... 110 1e-24
AT1G55660.1 | Symbols: | F-box family protein | chr1:20800694-2... 110 1e-24
AT4G10400.2 | Symbols: | F-box family protein | chr4:6446335-64... 110 2e-24
AT4G10400.1 | Symbols: | F-box family protein | chr4:6446335-64... 110 2e-24
AT5G56440.1 | Symbols: | F-box family protein | chr5:22855742-2... 109 2e-24
AT4G09920.1 | Symbols: | F-box family protein | chr4:6224691-62... 108 4e-24
AT5G41840.1 | Symbols: | F-box family protein | chr5:16754436-1... 108 7e-24
AT3G26922.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 107 1e-23
AT2G04230.1 | Symbols: | F-box family protein | chr2:1447025-14... 106 2e-23
AT3G58880.1 | Symbols: | F-box family protein | chr3:21768485-2... 106 2e-23
AT1G66290.1 | Symbols: | F-box family protein | chr1:24713306-2... 106 2e-23
AT3G58860.1 | Symbols: | F-box family protein | chr3:21763742-2... 105 4e-23
AT4G15060.1 | Symbols: | F-box protein-related | chr4:8599035-8... 104 8e-23
AT5G22730.1 | Symbols: | F-box family protein | chr5:7551632-75... 104 1e-22
AT3G42770.1 | Symbols: | F-box family protein | chr3:14867122-1... 104 1e-22
AT3G58900.2 | Symbols: | F-box family protein | chr3:21773030-2... 104 1e-22
AT3G58900.1 | Symbols: | F-box family protein | chr3:21773030-2... 104 1e-22
AT3G58900.3 | Symbols: | F-box family protein | chr3:21773030-2... 103 1e-22
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 103 2e-22
AT3G59170.1 | Symbols: | F-box family protein | chr3:21878167-2... 103 2e-22
AT1G78750.1 | Symbols: | F-box family protein | chr1:29613122-2... 102 4e-22
AT5G56370.2 | Symbols: | F-box family protein | chr5:22836200-2... 102 4e-22
AT5G56370.1 | Symbols: | F-box family protein | chr5:22836200-2... 102 4e-22
AT1G55030.1 | Symbols: | F-box family protein | chr1:20530417-2... 101 7e-22
AT5G56420.2 | Symbols: | F-box family protein | chr5:22850863-2... 101 7e-22
AT5G56420.1 | Symbols: | F-box family protein | chr5:22850863-2... 101 7e-22
AT4G00160.1 | Symbols: | F-box family protein | chr4:63465-6536... 101 8e-22
AT3G52680.2 | Symbols: | F-box family protein | chr3:19527075-1... 101 8e-22
AT3G52680.1 | Symbols: | F-box family protein | chr3:19527075-1... 101 8e-22
AT5G41630.1 | Symbols: | F-box family protein | chr5:16650282-1... 100 1e-21
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 100 1e-21
AT3G59160.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 99 4e-21
AT3G03040.1 | Symbols: | F-box family protein | chr3:684685-686... 99 5e-21
AT3G49150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 99 6e-21
AT2G26860.2 | Symbols: | F-box family protein | chr2:11452421-1... 99 6e-21
AT2G26860.1 | Symbols: | F-box family protein | chr2:11452196-1... 99 6e-21
AT5G62970.1 | Symbols: | F-box family protein | chr5:25272033-2... 97 1e-20
AT5G56380.1 | Symbols: | F-box family protein | chr5:22838836-2... 97 1e-20
AT5G60610.1 | Symbols: | F-box family protein | chr5:24364049-2... 97 2e-20
AT5G22670.1 | Symbols: | F-box family protein | chr5:7538192-75... 97 2e-20
AT4G26350.1 | Symbols: | F-box family protein | chr4:13326853-1... 96 3e-20
AT1G52650.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 96 3e-20
AT3G49030.1 | Symbols: | F-box family protein | chr3:18173138-1... 95 8e-20
AT3G52670.1 | Symbols: | F-box family protein | chr3:19525247-1... 95 8e-20
AT5G56690.1 | Symbols: | F-box family protein | chr5:22939723-2... 94 2e-19
AT1G16930.1 | Symbols: | F-box family protein | chr1:5789987-57... 94 2e-19
AT1G06630.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 93 3e-19
AT1G06630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 93 3e-19
AT3G03030.1 | Symbols: | F-box family protein | chr3:682252-683... 93 3e-19
AT3G44810.1 | Symbols: | F-box family protein | chr3:16358496-1... 92 3e-19
AT1G06630.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 92 4e-19
AT5G38396.1 | Symbols: | F-box family protein | chr5:15373094-1... 91 1e-18
AT3G58940.1 | Symbols: | F-box family protein | chr3:21781002-2... 91 1e-18
AT3G51530.1 | Symbols: | F-box family protein | chr3:19112873-1... 91 1e-18
AT3G59250.1 | Symbols: | F-box family protein | chr3:21901726-2... 91 1e-18
AT1G66310.1 | Symbols: | F-box family protein | chr1:24722971-2... 90 3e-18
AT3G59180.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 89 3e-18
AT3G59000.1 | Symbols: | F-box family protein | chr3:21799757-2... 89 4e-18
AT3G58930.1 | Symbols: | F-box family protein | chr3:21778381-2... 89 4e-18
AT3G58980.1 | Symbols: | F-box family protein | chr3:21794445-2... 89 4e-18
AT1G51370.2 | Symbols: | F-box family protein | chr1:19045615-1... 89 4e-18
AT4G00320.1 | Symbols: | F-box family protein | chr4:139939-141... 89 4e-18
AT1G32375.1 | Symbols: | F-box family protein | chr1:11679230-1... 89 5e-18
AT1G51370.1 | Symbols: | F-box family protein | chr1:19045615-1... 89 5e-18
AT1G69630.1 | Symbols: | F-box family protein | chr1:26191640-2... 88 7e-18
AT1G66300.1 | Symbols: | F-box family protein | chr1:24716497-2... 88 9e-18
AT5G56820.1 | Symbols: | F-box family protein | chr5:22976334-2... 87 1e-17
AT4G22280.1 | Symbols: | F-box family protein | chr4:11776054-1... 87 2e-17
AT4G22280.2 | Symbols: | F-box family protein | chr4:11776368-1... 86 3e-17
AT3G58920.1 | Symbols: | F-box family protein | chr3:21776293-2... 86 4e-17
AT5G22610.1 | Symbols: | F-box family protein | chr5:7515217-75... 86 5e-17
AT5G22660.1 | Symbols: | F-box family protein | chr5:7536906-75... 85 6e-17
AT5G22660.2 | Symbols: | F-box family protein | chr5:7536328-75... 85 7e-17
AT2G29910.2 | Symbols: | F-box family protein | chr2:12751823-1... 85 7e-17
AT2G29910.1 | Symbols: | F-box family protein | chr2:12751686-1... 85 7e-17
AT5G02700.1 | Symbols: | F-box family protein | chr5:609381-611... 85 8e-17
AT5G56560.1 | Symbols: | F-box family protein | chr5:22899724-2... 85 9e-17
AT3G28410.1 | Symbols: | F-box family protein | chr3:10640152-1... 85 9e-17
AT3G58960.1 | Symbols: | F-box family protein | chr3:21787146-2... 85 9e-17
AT1G66320.1 | Symbols: | F-box family protein | chr1:24727041-2... 84 1e-16
AT1G78840.1 | Symbols: | F-box family protein | chr1:29639290-2... 83 2e-16
AT5G22720.1 | Symbols: | F-box family protein | chr5:7549565-75... 83 3e-16
AT3G44060.1 | Symbols: | F-box family protein | chr3:15824938-1... 82 4e-16
AT5G22700.1 | Symbols: | F-box family protein | chr5:7545653-75... 82 4e-16
AT4G13985.1 | Symbols: FBD1 | FBD1 (FBD-ASSOCIATED F-BOX PROTEIN... 82 5e-16
AT1G78760.1 | Symbols: | F-box family protein | chr1:29615174-2... 82 6e-16
AT4G27050.4 | Symbols: | F-box family protein | chr4:13575884-1... 82 8e-16
AT4G27050.3 | Symbols: | F-box family protein | chr4:13575884-1... 82 8e-16
AT4G27050.2 | Symbols: | F-box family protein | chr4:13575884-1... 82 8e-16
AT4G27050.1 | Symbols: | F-box family protein | chr4:13575884-1... 82 8e-16
AT3G03360.1 | Symbols: | F-box family protein | chr3:795218-796... 81 9e-16
AT3G49040.1 | Symbols: | F-box family protein | chr3:18177676-1... 81 1e-15
AT5G56400.1 | Symbols: | F-box family protein | chr5:22846069-2... 81 1e-15
AT3G49020.1 | Symbols: | F-box family protein | chr3:18169079-1... 81 1e-15
AT1G13780.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 81 1e-15
AT5G38390.1 | Symbols: | F-box family protein | chr5:15366432-1... 80 1e-15
AT1G05080.1 | Symbols: | F-box family protein | chr1:1459091-14... 80 2e-15
AT5G02910.1 | Symbols: | F-box family protein | chr5:677120-678... 79 3e-15
AT5G53640.1 | Symbols: | F-box family protein | chr5:21785999-2... 79 3e-15
AT2G29930.3 | Symbols: | F-box family protein | chr2:12756457-1... 79 3e-15
AT2G29930.1 | Symbols: | F-box family protein | chr2:12756457-1... 79 3e-15
AT5G25860.1 | Symbols: | F-box family protein | chr5:9016908-90... 79 4e-15
AT3G10750.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 79 4e-15
AT3G18150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 79 5e-15
AT5G44490.1 | Symbols: | F-box family protein | chr5:17924035-1... 79 6e-15
AT5G53840.1 | Symbols: | F-box family protein (FBL13) | chr5:21... 78 7e-15
AT5G50270.1 | Symbols: | F-box family protein | chr5:20457487-2... 78 8e-15
AT4G13960.1 | Symbols: | F-box family protein | chr4:8060681-80... 77 1e-14
AT5G56810.1 | Symbols: | F-box family protein | chr5:22974520-2... 77 1e-14
AT5G52460.1 | Symbols: EDA41 | EDA41 (embryo sac development arr... 77 2e-14
AT5G03100.1 | Symbols: | F-box family protein | chr5:726832-727... 77 2e-14
AT1G60400.1 | Symbols: | F-box family protein | chr1:22254405-2... 77 2e-14
AT4G03220.1 | Symbols: | F-box family protein | chr4:1417472-14... 76 3e-14
AT1G21990.1 | Symbols: | F-box family protein | chr1:7740530-77... 76 3e-14
AT2G42720.1 | Symbols: | F-box family protein | chr2:17785653-1... 75 6e-14
AT1G22000.1 | Symbols: | F-box family protein | chr1:7744189-77... 75 7e-14
AT3G44090.1 | Symbols: | F-box family protein | chr3:15839123-1... 75 7e-14
AT5G56700.1 | Symbols: | F-box protein-related | chr5:22941991-... 75 9e-14
AT3G59000.2 | Symbols: | F-box family protein | chr3:21799757-2... 74 2e-13
AT3G59150.1 | Symbols: | F-box family protein | chr3:21872729-2... 73 3e-13
AT1G48400.1 | Symbols: | F-box family protein | chr1:17882136-1... 73 4e-13
AT5G02930.1 | Symbols: | F-box family protein | chr5:682577-684... 72 4e-13
AT5G25850.1 | Symbols: | F-box family protein | chr5:9014082-90... 72 6e-13
AT5G27750.1 | Symbols: | F-box family protein | chr5:9828430-98... 72 6e-13
AT4G13965.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 6e-13
AT3G54160.1 | Symbols: | syntaxin-related family protein | chr3... 72 8e-13
AT5G35995.2 | Symbols: | F-box family protein | chr5:14136707-1... 72 8e-13
AT5G35995.1 | Symbols: | F-box family protein | chr5:14136707-1... 72 8e-13
AT5G02920.1 | Symbols: | ubiquitin-protein ligase | chr5:680541... 71 1e-12
AT5G18780.1 | Symbols: | F-box family protein | chr5:6264610-62... 70 1e-12
AT1G16940.1 | Symbols: | F-box family protein | chr1:5791983-57... 70 2e-12
AT1G13570.1 | Symbols: | F-box family protein | chr1:4642528-46... 70 2e-12
AT4G10420.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 2e-12
AT1G78730.1 | Symbols: | F-box family protein | chr1:29607840-2... 69 4e-12
AT1G64540.1 | Symbols: | F-box family protein | chr1:23966909-2... 68 7e-12
AT3G56780.1 | Symbols: | F-box family protein | chr3:21031613-2... 68 9e-12
AT5G44950.1 | Symbols: | F-box family protein | chr5:18151665-1... 68 1e-11
AT2G26030.3 | Symbols: | F-box family protein | chr2:11091505-1... 67 1e-11
AT2G26030.1 | Symbols: | F-box family protein | chr2:11091505-1... 67 1e-11
AT5G41830.1 | Symbols: | F-box family protein-related | chr5:16... 67 2e-11
AT5G35926.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 4e-11
AT5G38386.1 | Symbols: | F-box family protein | chr5:15363178-1... 66 4e-11
AT3G62440.1 | Symbols: | F-box family protein | chr3:23096104-2... 65 5e-11
AT1G80470.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 5e-11
AT1G32020.1 | Symbols: | F-box family protein | chr1:11512552-1... 65 5e-11
AT4G10410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 6e-11
AT1G61330.1 | Symbols: | F-box family protein | chr1:22622975-2... 65 6e-11
AT1G56610.2 | Symbols: | syntaxin-related family protein | chr1... 65 7e-11
AT5G15620.1 | Symbols: | F-box family protein | chr5:5082465-50... 65 8e-11
AT5G38570.1 | Symbols: | F-box family protein | chr5:15449279-1... 64 1e-10
AT3G44080.1 | Symbols: | F-box family protein | chr3:15835632-1... 64 1e-10
AT1G56610.1 | Symbols: | syntaxin-related family protein | chr1... 64 1e-10
AT5G18770.1 | Symbols: | F-box family protein | chr5:6261426-62... 64 1e-10
AT3G26930.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT5G56570.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 5e-10
AT5G56390.1 | Symbols: | F-box family protein | chr5:22842790-2... 62 6e-10
AT1G50980.1 | Symbols: | F-box family protein | chr1:18900541-1... 61 1e-09
AT1G67390.1 | Symbols: | F-box family protein | chr1:25244690-2... 60 3e-09
AT1G66640.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 4e-09
AT1G49610.1 | Symbols: | F-box family protein | chr1:18361679-1... 59 6e-09
AT3G26920.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 2e-08
AT1G19410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 2e-08
AT3G14710.1 | Symbols: | F-box family protein | chr3:4941545-49... 57 3e-08
AT1G60410.1 | Symbols: | F-box family protein | chr1:22259129-2... 56 3e-08
AT3G54910.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 3e-08
AT3G54910.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 3e-08
AT3G54910.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 3e-08
AT1G57690.1 | Symbols: | F-box family protein | chr1:21366721-2... 56 5e-08
AT5G38565.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 7e-08
AT1G78740.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 8e-08
AT3G62430.1 | Symbols: | F-box family protein | chr3:23093795-2... 54 1e-07
AT3G58820.1 | Symbols: | F-box family protein | chr3:21752960-2... 54 1e-07
AT2G27505.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 3e-07
AT3G58950.1 | Symbols: | F-box family protein | chr3:21784116-2... 53 4e-07
AT2G29930.2 | Symbols: | F-box family protein | chr2:12756457-1... 52 5e-07
AT3G23955.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 5e-07
AT2G39415.1 | Symbols: | F-box family protein | chr2:16458607-1... 52 6e-07
AT5G44940.1 | Symbols: | F-box family protein | chr5:18149369-1... 51 1e-06
AT5G44960.1 | Symbols: | F-box family protein | chr5:18153852-1... 50 3e-06
AT5G40050.1 | Symbols: | F-box family protein | chr5:16032083-1... 49 6e-06
AT5G11370.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 48 8e-06
AT3G60790.1 | Symbols: | F-box protein-related | chr3:22464623-... 48 1e-05
>AT4G14096.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT4G14103.1); Has
1300 Blast hits to 1271 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1300;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr4:8124606-8126202 FORWARD
Length = 468
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 158/306 (51%), Gaps = 15/306 (4%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
DIIS LPE + +ILSFLP K+ TS+LSK+W+Y + P D D N ++ +
Sbjct: 8 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETE-V 66
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGKR 129
S V +VL+ + + KF L++ V + WI+N ++R V +LD+ + +
Sbjct: 67 SSSFMDFVDRVLALQGNSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVYMETE 126
Query: 130 FPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEK-SLNLLFSGCP 188
F P +F S++L+ LKL + L + PKLK+LY+ FE L L SGCP
Sbjct: 127 FVFPSEMFLSKTLVRLKLMLYPLLEF-EDVYLPKLKTLYIDSCYFEKYGIGLTKLLSGCP 185
Query: 189 VLQELVIYCWYWETVENVTVSLPTLRTLTI---YYDPFCPKHLLGCAVNISARNLISLHC 245
+L++LV+ W T + +VS+PTL+ LT D F PK +V+I NL+ L
Sbjct: 186 ILEDLVLDDIPWCTWDFASVSVPTLKRLTFSTQVRDEF-PK-----SVSIDTPNLVYLKF 239
Query: 246 TSCLTINFSFCDLFSLVDAYIDVPSLWPSEG---QKVALCAAKLLHGILRVKSLVLTEHA 302
T + + + SLV+A+ID+ L +G + A + I VK+L L+ +
Sbjct: 240 TDTVAGKYPKVNFDSLVEAHIDLRLLQGHQGYGENDMVGNATDFIMRICNVKTLYLSSNT 299
Query: 303 TEVVKF 308
+V+ +
Sbjct: 300 LQVLTY 305
>AT3G59230.1 | Symbols: | F-box family protein |
chr3:21896052-21897787 REVERSE
Length = 491
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 151/324 (46%), Gaps = 27/324 (8%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDA---MSDDFKNNRS 66
DII+ LPE ++++ILSFL K+ TSLLS++W+Y + P DFD M D N
Sbjct: 12 DIINSLPEALIYHILSFLSTKEAAITSLLSRKWRYFFAFVPNLDFDDPVRMQPDMGNQEE 71
Query: 67 QGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRL 126
+ S V +VL+ + + KF L+ V V RWI N ++ V ELD+S+
Sbjct: 72 TEIHTSFMDFVDRVLALRGNSHVNKFSLKCGNGVDGVGVTRWILNTLELSVSELDLSIAS 131
Query: 127 GKRFPLPHILFTSESLITLKLEMRCALHIPR------SICFPKLKSLYLSHAVFEDE-KS 179
+ P +F S+SL+ L++E R L + PKLK+LYL + +
Sbjct: 132 DTTYLFPSKVFVSKSLVRLRIEARNGLAFGSLVIDVGDVSLPKLKTLYLDSVELDYQIIC 191
Query: 180 LNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARN 239
L L SGC VL+ELV+ W E+ + S+PTL+ LT + + +V
Sbjct: 192 LAKLLSGCHVLEELVMIDVVWNFWESCSASIPTLKRLTFFTEEGWNNP--PPSVTFDNPA 249
Query: 240 LISLHCTSCLTINFSFCDLFSLVDAY-------------IDVPSLWPSEGQKVALC--AA 284
L+ T + + + + SLV+A I VP +P + A+ A
Sbjct: 250 LVYFEYTDTVALKYEKVNFDSLVEARLGLRVGYEESENPIQVPFGFPFPLIEYAMVGDAT 309
Query: 285 KLLHGILRVKSLVLTEHATEVVKF 308
LL GI V+ L L EV+ F
Sbjct: 310 DLLMGIRNVQVLYLYASTVEVLTF 333
>AT4G14103.1 | Symbols: | F-box family protein |
chr4:8126948-8128305 FORWARD
Length = 381
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 158/313 (50%), Gaps = 22/313 (7%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D+IS LP+++ +ILSFLP K+ TS+LSK+W+Y + P D D N ++ +
Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETE-I 66
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGKR 129
S V +VL+ + + KF L++ + + WI+N ++R V +LD+ L L
Sbjct: 67 STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESE 126
Query: 130 FPLPHILFTSESLITLKLEMRCALHIP-RSICFPKLKSLYLSHAVFEDEK-SLNLLFSGC 187
F LP ++ ++L+ LKL I + PKLK+LY+ FE+ L L SGC
Sbjct: 127 FLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLSGC 186
Query: 188 PVLQELVIYCWYWETVENVTVSLPTLRTLTIYY---DPFCPKHLLGCAVNISARNLISLH 244
P+L++LV+ W + +VS+PTL+ L + D F PK +L + NL+ L
Sbjct: 187 PMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEF-PKSVL-----LDTPNLVYLK 240
Query: 245 CTSCLTINFSFCDLFSLVDAYIDVPSLWP---------SEGQKVALCAAKLLHGILRVKS 295
T + + +L SLV+A+ID+ L P E V A + I VK+
Sbjct: 241 FTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVG-NATDFIMRICNVKT 299
Query: 296 LVLTEHATEVVKF 308
L L+ + +V+ +
Sbjct: 300 LYLSANTLQVLTY 312
>AT1G58310.1 | Symbols: | F-box family protein |
chr1:21631947-21633642 FORWARD
Length = 505
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 40/333 (12%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFD------------AM 57
DIIS LP+ +L +ILSFL K+ TS+L+K+W+Y + S P DFD A+
Sbjct: 8 DIISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDFDDSVHLRLGKRNPAV 67
Query: 58 SDD----FKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAV 113
S + N RS + S V QVL ++ + KF L++R V + WI +
Sbjct: 68 SGEDYLKMINERSDQLSTSFMDFVDQVLRLQDNSPLHKFSLKIRDCVDIVRIICWILKVL 127
Query: 114 KRKVQELDISLRLGKRFPLPHILFTSESLITLKLEMRCALHIP-RSICFPKLKSLYLSHA 172
+R V +L++ + L + LP +F SE+L+ LKL + I + PKLK+L++
Sbjct: 128 ERGVSDLELDMHLKWKSSLPSKIFLSETLVRLKLSVERGPFIDVEDVHLPKLKTLHIVSV 187
Query: 173 VFEDEK-SLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLG- 230
FE LN L SGC +L+EL + W + V+VSL TL+ LT FC + +
Sbjct: 188 KFEKHGIGLNKLLSGCHILEELNLEYISWCLWDFVSVSLTTLKRLT-----FCGEVMQDE 242
Query: 231 --CAVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDV-------------PSLWPSE 275
+V+ + NL+ L T + +S + SLV+A+I++ S E
Sbjct: 243 NPISVSFNTPNLVYLMFTDAIADEYSTVNFDSLVEAHINLQMSEDQVEQTRFSDSEGNME 302
Query: 276 GQKVALCAAKLLHGILRVKSLVLTEHATEVVKF 308
G VA A +L+ GI VK L L+ + EV+ +
Sbjct: 303 GCMVA-NATELIMGICNVKILYLSVYTLEVLTY 334
>AT4G00315.1 | Symbols: | F-box family protein | chr4:137404-138888
FORWARD
Length = 441
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 126/233 (54%), Gaps = 15/233 (6%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD S LP+E+L +LSFLP KD VRTSLLS RWK W P+ ++D + + QG
Sbjct: 1 MDKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRH--YSVSEGQG 58
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLR----GSVIESDVCRWISNAV-KRKVQELDIS 123
L R + L + IE L+LR GS+ D+ W+S AV V+EL +
Sbjct: 59 ----LARFITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLK 114
Query: 124 LRLGKRFP--LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLN 181
L P LP L+ +S++ LKL+ + +PR +C P LK+L+L + DE SL+
Sbjct: 115 LCTFAERPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLH 174
Query: 182 LLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVN 234
L S CPVL++LV+ + + ++V + +L+ LT+ CP HL G +N
Sbjct: 175 RLLSNCPVLEDLVVERDRIDNLGKLSVVVKSLQRLTLKMS--CPCHLDGIMMN 225
>AT3G59200.1 | Symbols: | F-box family protein |
chr3:21887484-21889214 FORWARD
Length = 520
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 163/326 (50%), Gaps = 38/326 (11%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LP V+ +ILSFLP K+ TS+LSK+W+Y + DFD D+++ + +
Sbjct: 7 DRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFD--DSDYQDGKPKS- 63
Query: 70 EMSLQRS----VHQVLSCDNSDCIEKFRLRLRGSVIE-SDVCRWISNAVKRKVQELDISL 124
++ L RS V +VL+ + + KF L ++ + V WI N + R V ELD+S+
Sbjct: 64 DVELSRSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSELDLSI 123
Query: 125 RLGKRFPLPHILFTSESLITLKLEMRCALHIP---RSICFPKLKSLYLSHAVFEDEKSLN 181
+PLP +F S++L+ LKL L + + + PKLK+LY+ V E+
Sbjct: 124 L---EYPLPSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYI-DCVDVQERGFG 179
Query: 182 L--LFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGC-AVNISAR 238
L SGCPVL+ELV+ WE + +VS+ TL+ LT FC + +V+
Sbjct: 180 FVKLLSGCPVLEELVLMNIGWENWKFCSVSVKTLKRLTF----FCEETYENPKSVSFDTP 235
Query: 239 NLISLHCTSCLTINFSFCDLFSLVDAYIDV-------------PSLWPSEG---QKVALC 282
NL+ L + + + + SLV+A+I + + SEG +++
Sbjct: 236 NLVYLEYSDAIASKYPKVNFNSLVEAHIGLRLTEDQSGDADFSEEDYFSEGDEKKQMVGN 295
Query: 283 AAKLLHGILRVKSLVLTEHATEVVKF 308
A L GI V+ L L+ A EV+ F
Sbjct: 296 ATDFLKGISTVQILYLSAQAIEVLTF 321
>AT3G59190.1 | Symbols: | F-box family protein |
chr3:21884740-21886101 FORWARD
Length = 388
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 159/321 (49%), Gaps = 28/321 (8%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAM-SDDFKNNRSQG 68
DIIS LP+ +L ++LSFLP + TS+L+KRW++ P D D M D K R +
Sbjct: 12 DIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKMGRRKR 71
Query: 69 MEM--SLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRL 126
+E+ S + V +V++ + ++KF LR + S V W+ + R V+ELD+ +
Sbjct: 72 LELRKSFKLFVDRVMALQGNAPLKKFSLRCKIGSDPSRVNGWVLKVLDRGVEELDLYIAS 131
Query: 127 GKRFPLPHILFTSESLITLKLEMRCALHIPRSICF-PKLKSLYLSHAVFEDEKS--LNLL 183
+PLP + +++L++LK+ I F PKLK+L+LS F DE L
Sbjct: 132 EYEYPLPPKVLMTKTLVSLKVSGTDEFTIDVGEFFLPKLKTLHLSAISFGDEGGPPFAKL 191
Query: 184 FSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPF--CPKHLLGCAVNISARNLI 241
S C L+ELV+ W+ E +VS P+L+ ++I + PK +V+ NL+
Sbjct: 192 ISACHALEELVMIKMMWDYWEFCSVSSPSLKRVSIDCENIDENPK-----SVSFDTPNLV 246
Query: 242 SLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSE------------GQK--VALCAAKLL 287
L T + + + + SLV+A I + + P + G K AA +
Sbjct: 247 YLEFTDTVAVKYPKVNFDSLVEASIGL-RMTPDQVFDARDLVNRHHGYKRCKGANAADFM 305
Query: 288 HGILRVKSLVLTEHATEVVKF 308
G+ VK++ L+ A EV+ F
Sbjct: 306 MGVCNVKTMYLSSEALEVLTF 326
>AT4G26340.1 | Symbols: | F-box family protein |
chr4:13324130-13325559 FORWARD
Length = 419
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 14/215 (6%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWK--SNPRYDFDAMSDDFKNNRS 66
MD IS L +++L ILSF+P KD+V TSLLSKRW+ W S YD + D+K
Sbjct: 1 MDRISQLSDDLLLQILSFIPGKDVVATSLLSKRWQSLWMLVSELEYDDSYHTGDYK---- 56
Query: 67 QGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRL 126
S + V++ L +N+ I+ L L D+ WI A+ R++++L I++R
Sbjct: 57 -----SFSQFVYRSLLSNNAPVIKHLHLNLGPDCPAIDIGLWIGFALTRRLRQLKINIRT 111
Query: 127 GKR---FPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
F LP L+TS++L TL+L L +P S+C P LK L+L +ED+ SL L
Sbjct: 112 SSNDASFSLPSSLYTSDTLETLRLINFVLLDVPSSVCLPSLKVLHLKTVDYEDDASLPSL 171
Query: 184 FSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
GCP L+EL + + +VT +P+LR L++
Sbjct: 172 LFGCPNLEELFVERHDQDLEMDVTFVVPSLRRLSM 206
>AT3G59210.1 | Symbols: | F-box family protein |
chr3:21889942-21891553 FORWARD
Length = 484
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 150/316 (47%), Gaps = 23/316 (7%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
DII+ LP+ +L ILS L K+ TSLLSKRW+Y + P DFD + Q
Sbjct: 7 DIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQDQ 66
Query: 70 EM-SLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
+ S V +VL D I KF L+ + + DV WI N ++ V +L + +
Sbjct: 67 DQTSFIDFVDRVLKLRGKDHINKFSLKCGDGIEDEDVFPWILNTLRHGVSDLSLHVSPSL 126
Query: 129 RFPLPHILFTSESLITLKLEMRCALHIP-RSICFPKLKSLYLSHAVFEDEK-SLNLLFSG 186
+ LP +F S++L+ LK+ + + R++C PKLK+L L VFE+ K L SG
Sbjct: 127 VYWLPSKVFASKTLVRLKIGPKDGPRVKLRNVCLPKLKTLNLDSVVFEEGKIGFAKLLSG 186
Query: 187 CPVLQELVIYCWYWETVENVTVSLPTLRTLTIY--YDPFCPKHLLGCAVNISARNLISLH 244
CPVL+EL + W+ ++ +VS L+ LT+Y + PK +V+ N++
Sbjct: 187 CPVLEELSLLNLAWDRWDSCSVSSKILKRLTLYCAHSSRNPK-----SVSFDTPNVVYFE 241
Query: 245 CTSCLTINFSFCDLFSLVDAYIDV------------PSLWPSEGQKVALCAAKLLHGILR 292
+ + + + SLV+A I + S E + V A LL GI
Sbjct: 242 YSDNIANKYPKVNFDSLVEASIGIRMTKVQKANARYVSDVDEETEMVG-NATDLLMGICN 300
Query: 293 VKSLVLTEHATEVVKF 308
VK+L L+ E +
Sbjct: 301 VKTLYLSYDTLETLNL 316
>AT5G38590.1 | Symbols: | F-box family protein |
chr5:15452586-15453455 REVERSE
Length = 289
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 7/212 (3%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD I+ LP+++L ILS++P V TS+LSKRW++ W P D+ + + R G
Sbjct: 1 MDKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTS-----RWCRKPG 55
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIE-SDVCRWISNAVKRKVQELDISLRLG 127
++ L+ +H+ L + IE R I+ D+ RWI AV R V +LDI
Sbjct: 56 -DVGLRDFIHKNLPLHRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSE 114
Query: 128 KRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGC 187
F +SL+TLKL IP +C P LK+L L + F + KSL L S C
Sbjct: 115 NENIFLSSFFACKSLVTLKLRSVTLRDIPSMVCLPSLKTLLLDNVSFVEGKSLQELLSIC 174
Query: 188 PVLQELVIYCWYWETVENVTVSLPTLRTLTIY 219
PVL++L +YC +E + +T+ +P+L +L++Y
Sbjct: 175 PVLEDLSVYCDDYENTKELTIVVPSLLSLSLY 206
>AT5G38590.2 | Symbols: | F-box family protein |
chr5:15452066-15453455 REVERSE
Length = 410
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 7/212 (3%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD I+ LP+++L ILS++P V TS+LSKRW++ W P D+ + + R G
Sbjct: 1 MDKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTS-----RWCRKPG 55
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIE-SDVCRWISNAVKRKVQELDISLRLG 127
++ L+ +H+ L + IE R I+ D+ RWI AV R V +LDI
Sbjct: 56 -DVGLRDFIHKNLPLHRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSE 114
Query: 128 KRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGC 187
F +SL+TLKL IP +C P LK+L L + F + KSL L S C
Sbjct: 115 NENIFLSSFFACKSLVTLKLRSVTLRDIPSMVCLPSLKTLLLDNVSFVEGKSLQELLSIC 174
Query: 188 PVLQELVIYCWYWETVENVTVSLPTLRTLTIY 219
PVL++L +YC +E + +T+ +P+L +L++Y
Sbjct: 175 PVLEDLSVYCDDYENTKELTIVVPSLLSLSLY 206
>AT3G50710.1 | Symbols: | F-box family protein |
chr3:18845199-18846673 REVERSE
Length = 427
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 11/216 (5%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS L +++L I+S LP KD+V T LLSKRWK+ W P+ FD D+F+ S
Sbjct: 1 MDRISNLSDDLLLKIVSSLPTKDVVVTMLLSKRWKFLWMMVPKLRFD---DEFELEPSYY 57
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDIS----- 123
+ V + + + + +E + + D+ WI + R ++EL+IS
Sbjct: 58 GR--FLKYVDKSMVLNRAQVLETVKFNVGPCCSSEDIATWIRIGMVRNMRELEISHCEGY 115
Query: 124 LRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
R + LP L+T E L LKL L++P +CFP LKSL+L ++ +KS L
Sbjct: 116 FREHRSIKLPKSLYTYEKLEVLKLASTVVLNVPIDVCFPSLKSLHLVCVEYKTKKSHRRL 175
Query: 184 FSGCPVLQELVIYCWYWET-VENVTVSLPTLRTLTI 218
SGCPVL+ELV+ Y V + V +PTL++L+I
Sbjct: 176 LSGCPVLEELVLDKSYNSFHVRSFYVEIPTLQSLSI 211
>AT5G56410.1 | Symbols: | F-box family protein |
chr5:22848508-22850331 REVERSE
Length = 503
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 119/219 (54%), Gaps = 21/219 (9%)
Query: 17 EEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFK--------NNRSQG 68
+E+L ILSFLP K V TS+LSK+WK+ W P+ ++ DD K +RS+
Sbjct: 10 DELLVKILSFLPTKAAVTTSILSKQWKFLWMRLPKLEY---HDDIKIYILYMRGGSRSRT 66
Query: 69 MEMSLQRS------VHQVLSCDNSDCIEKFRLRLRGSVIESD-VCRWISNAVKRKVQELD 121
+ L++S + + L +S IE RL + + + + + W+ AV R V+EL
Sbjct: 67 DSILLEKSQRMWRFIDKNLPLHSSPVIESLRLTIYNELFQPESINLWVEIAVSRCVKELS 126
Query: 122 ISLR--LGKRFPL-PHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEK 178
+ GKR L P L+T +SL+TLKL + +P C P LK+L+LSH + DE+
Sbjct: 127 VRFSPFKGKRDALLPTTLYTCKSLVTLKLRENILVDVPHVFCLPSLKTLHLSHVTYADEE 186
Query: 179 SLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLT 217
SL L S C VL++LV+ + V N V +P+L +L+
Sbjct: 187 SLQRLLSNCFVLEDLVVERRVGDNVRNFAVIIPSLLSLS 225
>AT3G59240.1 | Symbols: | F-box family protein |
chr3:21898682-21900364 REVERSE
Length = 504
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 148/312 (47%), Gaps = 22/312 (7%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFD----AMSDDFKNNR 65
DIIS LPE ++ ++LSF+P K+ TSLLS++W+Y + P DFD S N
Sbjct: 8 DIISDLPEALICHLLSFVPTKEAALTSLLSEKWRYLFAFAPILDFDDSVWMQSPLVYMNE 67
Query: 66 SQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLR 125
M V +VL + + +F L R + + RWISN ++R V +LD+
Sbjct: 68 VHRKFMDF---VDRVLGLQGNSTLVRFSLNCRNGIDRECIFRWISNVIERGVSDLDLGGN 124
Query: 126 LGKRFPLPHILFTSESLITLKLEMR-CALHIPRSICFPKLKSLYLSHAVFEDEKSLNL-L 183
+P +F S+SL+ L++ C + + PKLK+L LS F D + L L
Sbjct: 125 FVSNRSMPSSVFVSKSLVKLRIRTENCTIIDLEDVFLPKLKTLDLSSIWFRDGDTCLLKL 184
Query: 184 FSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPF--CPKHLLGCAVNISARNLI 241
SGC VL++L + +W+ N ++S TL+ LT++ + P +++ NL+
Sbjct: 185 ISGCQVLEDLTMSDLWWDGYWNRSMSSKTLKRLTVHCSDWDRSPG-----SISFDTPNLV 239
Query: 242 SLHCTSCLTINFSFCDLFSLVDAYIDV-----PSLWPSEGQKVALCAAKLLHGILRVKSL 296
+ + + SLV+A I + S G V + A L GI V+ L
Sbjct: 240 YFEYFDLVADKYEVVNFDSLVEASIGLRMRHHQRAHASYGDLV-VNATNLFMGISNVRIL 298
Query: 297 VLTEHATEVVKF 308
L +A EV+ F
Sbjct: 299 QLFSNALEVLTF 310
>AT1G55660.1 | Symbols: | F-box family protein |
chr1:20800694-20802340 FORWARD
Length = 492
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 123/237 (51%), Gaps = 15/237 (6%)
Query: 5 VTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNN 64
V + MD IS LP+E+L +LSFL KD V TS+LS RWK W P+ +++ + +
Sbjct: 48 VKNLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRH--YSVS 105
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLR----GSVIESDVCRWISNAVK-RKVQE 119
QG L R + L + IE L+ R GS+ D+ W+S AV V+E
Sbjct: 106 EGQG----LARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSNVRE 161
Query: 120 LDISLRLGKRFP--LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDE 177
L + L P LP L +S++ LKL+ + +PR +C P LK+L+L + D
Sbjct: 162 LSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDA 221
Query: 178 KSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVN 234
SL+ L S CPVL++LV+ + + ++V + +L+ LT+ C HL G +N
Sbjct: 222 NSLHRLLSNCPVLEDLVMERDKIDNLGKLSVIVKSLQRLTLKMSRPC--HLDGLKMN 276
>AT4G10400.2 | Symbols: | F-box family protein |
chr4:6446335-6447715 REVERSE
Length = 409
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 9/213 (4%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS LP+EVL ILSF+P K V TS+LSKRW++ W + F S + + +
Sbjct: 1 MDRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFG--SKRYSESEFKR 58
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIE-SDVCRWISNAVKRKVQELDI-SLRL 126
++ L R+ L + IE FRL L S + D+ W+ AV R ++EL I S
Sbjct: 59 LQCFLDRN----LPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHY 114
Query: 127 G-KRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
G K+ LP L+T +SL+ LKL+ L +PR +C P LK+L L + + SL L
Sbjct: 115 GEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLC 174
Query: 186 GCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
CPVL++LV+ + + + +TV +P+L+ L++
Sbjct: 175 NCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSL 207
>AT4G10400.1 | Symbols: | F-box family protein |
chr4:6446335-6447715 REVERSE
Length = 409
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 9/213 (4%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS LP+EVL ILSF+P K V TS+LSKRW++ W + F S + + +
Sbjct: 1 MDRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFG--SKRYSESEFKR 58
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIE-SDVCRWISNAVKRKVQELDI-SLRL 126
++ L R+ L + IE FRL L S + D+ W+ AV R ++EL I S
Sbjct: 59 LQCFLDRN----LPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHY 114
Query: 127 G-KRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
G K+ LP L+T +SL+ LKL+ L +PR +C P LK+L L + + SL L
Sbjct: 115 GEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLC 174
Query: 186 GCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
CPVL++LV+ + + + +TV +P+L+ L++
Sbjct: 175 NCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSL 207
>AT5G56440.1 | Symbols: | F-box family protein |
chr5:22855742-22857117 REVERSE
Length = 430
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDF-DAMSDDFKNNRSQ 67
MD IS+LP++V+ ILSF+P K +V T+LLSKRW+Y WK P+ D+ D D ++ R+
Sbjct: 1 MDRISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLDYRDPSLVDTEHWRA- 59
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLG 127
R V + L + +E L L + SD+ WIS A+ R+V+ L I +
Sbjct: 60 ------SRFVDKFLLLHEAPVLETLHLSLSRNCPPSDIETWISVAISRRVRNLHIYRYIP 113
Query: 128 KRFP--LPHILFTSESLITLKLEMRCAL-HIPRSICFPKLKSLYLSHAVFEDEKSLNLLF 184
P LP L+T E+L++L L + + P CF LK L L A F ++ +N L
Sbjct: 114 STGPIRLPRSLYTCETLVSLYLLLDFTVDDAPFMFCFRSLKVLVLLFAKFSSDEIVNRLL 173
Query: 185 SGCPVLQELVIYCWYWETVENVTVSLPTLRTL 216
SGCPVL+ L++ + V+N T++ P+L+ L
Sbjct: 174 SGCPVLEGLILI-RRNDNVKNFTIAAPSLQRL 204
>AT4G09920.1 | Symbols: | F-box family protein |
chr4:6224691-6225905 FORWARD
Length = 316
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 9/219 (4%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD I LP+EVL ILSF+P K V TS+LSKRW++ W + F S + + +
Sbjct: 1 MDRIIGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFG--SKRYSESEFKR 58
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIE-SDVCRWISNAVKRKVQELDI-SLRL 126
++ L R+ L + IE FRL L S + D+ W+ AV R ++EL I S
Sbjct: 59 LQCFLDRN----LPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHY 114
Query: 127 G-KRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
G K+ LP L+T +SL+ LKL+ L +PR +C P LK+L L + + SL L
Sbjct: 115 GEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLC 174
Query: 186 GCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFC 224
CPVL++L + + + V +P+L+ L++Y P C
Sbjct: 175 NCPVLEDLFVLLLRCDDIGMFIVIVPSLQRLSLYLSPRC 213
>AT5G41840.1 | Symbols: | F-box family protein |
chr5:16754436-16756263 REVERSE
Length = 540
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 169/341 (49%), Gaps = 40/341 (11%)
Query: 2 RQHVTDGM--DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAM-- 57
R+ V G+ D IS LP+ ++ +ILSFLP K+ T++L+KRWK P +FD
Sbjct: 4 RKKVVVGVSGDRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIY 63
Query: 58 --SDDFKNNRSQGME--MSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAV 113
+N S+ E MS SV L +++F ++ V +S V WI +
Sbjct: 64 FHPRARRNKYSKSYESFMSFVDSV-LALQAKTKTPLKRFHVKCEDVVDQSWVLEWIPKVL 122
Query: 114 KRKVQELDISLRLGKR-------FPLPHILFTSESLITLKLEMRCALHI--PRSICFPKL 164
KR V ++D+ + + + LP +F S++L+ LK++ + +HI + PKL
Sbjct: 123 KRGVLDIDLHITSSRNYCENSSFYSLPSKIFVSKTLVRLKIQFQDGVHIDVEGGVSLPKL 182
Query: 165 KSLYLSHAVFEDEKS-LNLLFSGCPVLQELVIYCWYW-ETVEN----VTVSLPTLRTLTI 218
K+L+L + F+ E S LN L SGC L+ELV+ W ++ E+ V+VS+PTL+ L
Sbjct: 183 KTLHLDY--FKIETSMLNKLLSGCHALEELVLANLMWADSSEDEACHVSVSIPTLKRLNF 240
Query: 219 ------------YYDPFCPKHL-LGCAVNISARNLISLHCTSCLTINFSFCDLFSLVDAY 265
+Y+ + +++ G +++ NL+ L + + + SLV+A
Sbjct: 241 CRSEDFYEGEFHFYEDYDEENINEGVSLSFDNPNLVYLEYSDVIVDKYKQVSFDSLVEAN 300
Query: 266 IDVPSLWPSEGQKVALCAAKLLHGILRVKSLVLTEHATEVV 306
+ + P + + + KLL GI VK L L++ EV+
Sbjct: 301 LRLRKT-PDQDETDKVNVTKLLMGIHNVKILYLSDDTLEVL 340
>AT3G26922.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana
protein match is: F-box family protein
(TAIR:AT3G52680.2). | chr3:9922858-9923891 FORWARD
Length = 306
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 9/214 (4%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LPE +L ILS LP+KD+V TS+LSK W+ WK P FD ++NN+S+
Sbjct: 14 DRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFD-----YENNQSE-- 66
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLR-GSVIESDVCRWISNAVKRKVQELDISLR-LG 127
+ + V ++L + + +E L R G +V WI A R V++L + + +
Sbjct: 67 DETYSEIVCRLLLSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDLVLHVESVK 126
Query: 128 KRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGC 187
F P L+ E+L +L L + +P C L++L L + ++ + S+ L SGC
Sbjct: 127 GSFIFPTGLYNCETLESLTLRSWVLVDVPSPACLKSLRTLRLENVDYKYDDSVYNLLSGC 186
Query: 188 PVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
P L+ LV+Y VE T+++P+L+ LTIY D
Sbjct: 187 PNLENLVVYRGNLLEVETFTIAVPSLQRLTIYDD 220
>AT2G04230.1 | Symbols: | F-box family protein |
chr2:1447025-1448678 REVERSE
Length = 448
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 116/218 (53%), Gaps = 6/218 (2%)
Query: 6 TDGM--DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKN 63
TD M D IS LP+ +L ILS LP ++ + TS+LSKRW+ W P+ FD+ + +
Sbjct: 7 TDSMNEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVFD 66
Query: 64 NRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQEL--D 121
+ + M +V++ LS + +E L G V WI+ A R V++L D
Sbjct: 67 DDNIDPTM-FSENVYKTLSLHKAPVLESLHLSFEGRTDCLHVGIWIATAFARGVRKLVLD 125
Query: 122 ISLRLGKRFPLPHILFT-SESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSL 180
+ + LP +LF+ ++SL LKL+ L P +C L+ LYL F+DE+S+
Sbjct: 126 SFYQEDQTVTLPSVLFSYNDSLEILKLKCAIDLDFPSRVCLKSLRKLYLDQVHFKDEESV 185
Query: 181 NLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
L GCP LQ+LV++ + V T++ P+L+ LTI
Sbjct: 186 CNLLCGCPSLQDLVVHRYSNADVATFTIASPSLQRLTI 223
>AT3G58880.1 | Symbols: | F-box family protein |
chr3:21768485-21770167 REVERSE
Length = 454
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 133/265 (50%), Gaps = 14/265 (5%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMS----DDFKNN 64
+D++S LP+++L +ILS L K+ TS+LSKRW+Y P +FD + ++ K
Sbjct: 2 VDLVSSLPDDLLGHILSLLTTKEAALTSILSKRWRYLIAFVPYLEFDDSAFLNPEEGKQT 61
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
R +G S V +VL+ I KF L+ + V + +WI N ++R V +D+S+
Sbjct: 62 R-EGTRQSFIDFVDRVLALHGDSPIRKFSLKCKTGVDLDLLNQWICNVLQRGVLLIDLSM 120
Query: 125 RLGKRFPLPHILFTSESLITLKLEMRCALHI-PRSI-CFPKLKSLYLSHAVFEDEKSLNL 182
LG R I F S +L+ LKL C + P I P LK+L L + D L
Sbjct: 121 DLGHRCMFIEI-FMSRTLVELKLGSGCRIAFGPEHISALPMLKTLTLDSVSWSDSGQLER 179
Query: 183 LFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFC-PKHLLGCAVNISARNLI 241
L S CP L+ L + + + N TVS+ +L+TLTI P H+ + NL+
Sbjct: 180 LLSACPALEALNLANVHG-SYPNATVSIASLKTLTIKSVSLSGPAHVF----SFDTPNLL 234
Query: 242 SLHCTSCLTINFSFCDLFSLVDAYI 266
L+ T+ ++ +L LV+A I
Sbjct: 235 CLNYTALFEDDYPLVNLEYLVEAQI 259
>AT1G66290.1 | Symbols: | F-box family protein |
chr1:24713306-24714843 REVERSE
Length = 453
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 149/313 (47%), Gaps = 30/313 (9%)
Query: 7 DGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRS 66
D +D IS LPE ++ +L LP KD+++TS+LS +W+ W+ PR D D NR
Sbjct: 26 DEVDWISDLPEALIVLVLLNLPTKDVIKTSVLSTKWRNIWRYVPRLDLD--------NRH 77
Query: 67 QGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDV------CRWISNAVKRKVQEL 120
SL + + + + + KF+LR GS ++ DV +WI A+KRKVQ +
Sbjct: 78 FTEFDSLASFIDRFMRSNRK--VNKFKLRC-GSDLDGDVDLATCSWKWIYMAIKRKVQHI 134
Query: 121 DISLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSL 180
D++ + +P ++ ESL++LKL L P + P LK L L F +E +
Sbjct: 135 DVTWPGVRIYPE---IYNCESLVSLKLS-EVTLTKPEFVSLPSLKVLVLDWVEFYNEFAF 190
Query: 181 NLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNL 240
++L SGCPVL+ + Y + V + V +L + YY V + A L
Sbjct: 191 DMLMSGCPVLESFTLCRRYLDNVRVLRVISQSLLSFN-YYGSSSKSFRDDLVVILDAPKL 249
Query: 241 ISLHCTSCLTINFSFCDLFSLVDAYIDVP-------SLWPSEGQKVALCAAKLLHGILRV 293
L + LT +F +L SLV+A ID+ P + K + L G+ RV
Sbjct: 250 EKLKLSHQLTASFIIENLSSLVEADIDIEFNFCRGKKFDPDDLPKREM-IRNFLVGLSRV 308
Query: 294 KSLVLTEHATEVV 306
K++ + EV+
Sbjct: 309 KTMTIAACTLEVI 321
>AT3G58860.1 | Symbols: | F-box family protein |
chr3:21763742-21765306 REVERSE
Length = 457
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 11/267 (4%)
Query: 6 TDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDF---DAMSDDFK 62
++ MD+ S LP+EV+ +ILS LP K+ TS+L+K+W+Y + P DF D +
Sbjct: 3 SEKMDLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEG 62
Query: 63 NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDI 122
G+ S V +VL+ + I+KF L ++ V V RWI N ++R V L +
Sbjct: 63 KREKDGILRSFMDFVDRVLALQGASPIKKFSLNVKTGVDPDRVDRWICNVLQRGVSHLAL 122
Query: 123 SLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICF-PKLKSLYLSHAVFEDEKSLN 181
+ + + LP+ + S++L+ LK L++ F P LK+L L F
Sbjct: 123 FMDFEEEYSLPYEISVSKTLVELKTGYGVDLYLWDDDMFLPMLKTLVLESVEF-GRGQFQ 181
Query: 182 LLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNLI 241
L CPVL+EL++ W+ NV +S +L+ L I + C LG ++ NL+
Sbjct: 182 TLLPACPVLEELMLLNMEWKD-RNVILSSSSLKNLKITSEDGC----LG-TLSFDTPNLV 235
Query: 242 SLHCTSCLTINFSFCDLFSLVDAYIDV 268
L + ++ +L +LV+ I++
Sbjct: 236 FLDYYDYVAEDYPIVNLKNLVEVGINL 262
>AT4G15060.1 | Symbols: | F-box protein-related |
chr4:8599035-8601761 FORWARD
Length = 572
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 118/222 (53%), Gaps = 22/222 (9%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
MD IS LP+++L +L FLP K V TS+LSKRW++ W P+ ++ N S
Sbjct: 170 DMDKISRLPDDLLVKVLLFLPTKIAVSTSILSKRWEFLWMWLPKLEY------HNTNYSA 223
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLR--LRGSVIESDVCRWISNAVKRKVQELDISLR 125
E L+ ++ L + IE RL+ L S+ ++ +WI AV R V+EL I+L
Sbjct: 224 SEEQRLRSFINLNLQLHRAPIIESLRLKFSLGRSIKPQNIKQWIIIAVFRCVRELSINL- 282
Query: 126 LGKRFPL---------PHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFED 176
FPL P L+ S+SL+ LKL+ + + +PR P LK L L ++D
Sbjct: 283 ----FPLYCIENPAKLPSSLYISKSLVILKLKDQILVDVPRMAYLPSLKYLLLKRVTYKD 338
Query: 177 EKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
SL+ L S CPVL+ LV+ + E +++++ +L+ LT+
Sbjct: 339 SNSLHQLLSSCPVLKNLVVERDEYNHDETLSITVSSLQRLTL 380
>AT5G22730.1 | Symbols: | F-box family protein |
chr5:7551632-7553219 REVERSE
Length = 466
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 12/218 (5%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKN-NRS 66
G D+IS LP+ ++ IL +LP+KDIVRTS LS RWK W PR D D S++F++ N
Sbjct: 26 GEDLISKLPDSLITQILLYLPIKDIVRTSSLSSRWKSLWLLIPRLDLD--SEEFQDYNAF 83
Query: 67 QGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD-VCRWISNAVKRKVQELDISLR 125
G + + + S + C++K +L R +V + V RWI V+RK++ LD+
Sbjct: 84 VGF---MNKFID--FSGEEKICLDKLKLSSRKTVNDLPCVTRWIDFVVRRKLKHLDVECL 138
Query: 126 LGKRF--PLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
+ ++F +P L+ ++L+ L+L R L ++ P LK++ L V+ ++ L L
Sbjct: 139 VNRKFLEEMPLSLYVCDTLVNLRLH-RVLLGKFEAVSLPCLKTMRLEENVYANDVVLESL 197
Query: 184 FSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
S CPVL++L+I + + V+ + V TL +L I ++
Sbjct: 198 ISSCPVLKDLIILRMFEDNVKVLRVHSLTLTSLNIDFN 235
>AT3G42770.1 | Symbols: | F-box family protein |
chr3:14867122-14870083 FORWARD
Length = 532
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 142/300 (47%), Gaps = 16/300 (5%)
Query: 15 LPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFD---AMSDDFKNNRSQGMEM 71
LP+E+L ILSFLP K+ TSLLSKRW+ + +P DFD + + + ++
Sbjct: 4 LPDELLVQILSFLPTKEATSTSLLSKRWRTLFTLSPNLDFDNSLLLQSKKRKWNMRNIQK 63
Query: 72 SLQRSVHQVLSCDNSDCIEKFRLRLRGSV----IESDVCRWISNAVKRKVQELDISLRLG 127
S V L+ I+ F L+ + ++ E DV RWI NA++ V EL + +
Sbjct: 64 SFVGFVDSTLALQGGKGIKSFSLKFKETLGDVNGEVDVNRWICNALEHGVSELHLRIDYT 123
Query: 128 KRFPLPHILFTSESLITLKLEMR-CALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
KR LP +FTS L+ L L + C +P I P LK L+L FE + L + +
Sbjct: 124 KRCHLPSEIFTSTKLVKLSLVTQSCFPVVPNCISLPSLKVLFLDSIWFEVPQFL-IFLTA 182
Query: 187 CPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNLISLHCT 246
CP L++L IY +S T++ L++ Y C + + +++ L+ +
Sbjct: 183 CPALEDLTIYQKPHSVGMPYHISSKTIKRLSVTYT--CGYFVDYGLKLFNTPSVVDLYYS 240
Query: 247 SCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGILRVKSLVLTEHATEVV 306
+ + +L SL A +D+ L A +LL GI VK+L LT +V+
Sbjct: 241 DYVRHKYPHMNLDSLPKATLDIHFL-----DDNAANVTELLSGIRNVKTLHLTSSTVKVI 295
>AT3G58900.2 | Symbols: | F-box family protein |
chr3:21773030-21774013 FORWARD
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 19/261 (7%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDA---MSDDFKNNR 65
MD+ S LP E+L++ILSFL K+ TS+LSKRW+ + P +FD + + +
Sbjct: 1 MDLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKRE 60
Query: 66 SQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLR 125
+G+ S V +VL I+ F L+ + V V RWI N + R V +LD+ +
Sbjct: 61 KEGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFID 120
Query: 126 LGKRFPLPHILFTSESLITLKLEMRCALH-IPRSICFPKLKSLYLSHAVFEDEKSLNLLF 184
+ LPH + S +L+ L++ L+ + +C P LK+L L + + +L
Sbjct: 121 FRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVLD-SCWLCIGQFQILL 179
Query: 185 SGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNLISLH 244
CP L+EL + W+ NVTVS L+ LTI L GC S NL SL
Sbjct: 180 LACPALEELDMTNTRWKD-SNVTVSSSILKELTI--------DLHGCC---SVVNLKSLS 227
Query: 245 CTSCLTINFSFCDLFSLVDAY 265
+ + F +CD SL + Y
Sbjct: 228 FDAPSLVYFYYCD--SLAEDY 246
>AT3G58900.1 | Symbols: | F-box family protein |
chr3:21773030-21774013 FORWARD
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 19/261 (7%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDA---MSDDFKNNR 65
MD+ S LP E+L++ILSFL K+ TS+LSKRW+ + P +FD + + +
Sbjct: 1 MDLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKRE 60
Query: 66 SQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLR 125
+G+ S V +VL I+ F L+ + V V RWI N + R V +LD+ +
Sbjct: 61 KEGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFID 120
Query: 126 LGKRFPLPHILFTSESLITLKLEMRCALH-IPRSICFPKLKSLYLSHAVFEDEKSLNLLF 184
+ LPH + S +L+ L++ L+ + +C P LK+L L + + +L
Sbjct: 121 FRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVLD-SCWLCIGQFQILL 179
Query: 185 SGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNLISLH 244
CP L+EL + W+ NVTVS L+ LTI L GC S NL SL
Sbjct: 180 LACPALEELDMTNTRWKD-SNVTVSSSILKELTI--------DLHGCC---SVVNLKSLS 227
Query: 245 CTSCLTINFSFCDLFSLVDAY 265
+ + F +CD SL + Y
Sbjct: 228 FDAPSLVYFYYCD--SLAEDY 246
>AT3G58900.3 | Symbols: | F-box family protein |
chr3:21773030-21774074 FORWARD
Length = 314
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 19/261 (7%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDA---MSDDFKNNR 65
MD+ S LP E+L++ILSFL K+ TS+LSKRW+ + P +FD + + +
Sbjct: 1 MDLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKRE 60
Query: 66 SQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLR 125
+G+ S V +VL I+ F L+ + V V RWI N + R V +LD+ +
Sbjct: 61 KEGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFID 120
Query: 126 LGKRFPLPHILFTSESLITLKLEMRCALH-IPRSICFPKLKSLYLSHAVFEDEKSLNLLF 184
+ LPH + S +L+ L++ L+ + +C P LK+L L + + +L
Sbjct: 121 FRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVLD-SCWLCIGQFQILL 179
Query: 185 SGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNLISLH 244
CP L+EL + W+ NVTVS L+ LTI L GC S NL SL
Sbjct: 180 LACPALEELDMTNTRWKD-SNVTVSSSILKELTI--------DLHGCC---SVVNLKSLS 227
Query: 245 CTSCLTINFSFCDLFSLVDAY 265
+ + F +CD SL + Y
Sbjct: 228 FDAPSLVYFYYCD--SLAEDY 246
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE
Length = 838
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 156/319 (48%), Gaps = 35/319 (10%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LP+EVL ILS +P K V TSLL+K+W+ ++ + D D F +
Sbjct: 232 DAISWLPDEVLGKILSLIPTKQAVSTSLLAKKWRTIFRLVDHLELD---DSFSLQAVKDQ 288
Query: 70 EMSLQRSVHQV--------------LSCDNSDCIEKFRLRLRGSVIESD----VCRWISN 111
L++ V V L CD I+ F L+ S + V RWISN
Sbjct: 289 TPGLRKHVRFVFTEDFKIFVDRTLALQCDYP--IKNFSLKCHVSKYDERQKACVGRWISN 346
Query: 112 AVKRKVQELDISLR-LGKRFPLPHILFTSESLITLKLEMR-CALHIPRSICFPKLKSLYL 169
V R V ELD+ ++ G F PH L S++L+ L L + C +P + P LKSL++
Sbjct: 347 VVGRGVFELDLRMKDPGIHFLPPH-LVASKTLVKLTLGTQLCLGQLPSYVSLPSLKSLFI 405
Query: 170 SHAVFEDEKSL-NLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHL 228
VF D + L +L +GCPVL+EL ++ + + T+S PTL+ L++ Y CP +
Sbjct: 406 DTIVFYDIEDLCCVLLAGCPVLEELSVHHHDFIATPH-TISSPTLKRLSVDY--HCPDDV 462
Query: 229 LGCA-VNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLL 287
+ ++ L+ L + C + +L SLV+A +D+ E + + + L+
Sbjct: 463 DSASHMSFDLPKLVYLEYSHCALGEYWQINLESLVEAKLDL----GLERKVLRMDVTDLI 518
Query: 288 HGILRVKSLVLTEHATEVV 306
GI V+SL L+ + V+
Sbjct: 519 IGIRNVQSLHLSPDSVHVI 537
>AT3G59170.1 | Symbols: | F-box family protein |
chr3:21878167-21879799 FORWARD
Length = 473
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 158/345 (45%), Gaps = 51/345 (14%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDA---MSDDFK---- 62
D+I+VLP+ +L +ILSFL K+ TSLLS+RW+Y P +FD + D +
Sbjct: 7 DMINVLPDALLCHILSFLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSVYLHRDKRVKNT 66
Query: 63 -------------NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRL---RGSVIESDVC 106
NN+ + + S V ++L+ + ++KF L++ V V
Sbjct: 67 LHEKGFVGFVLLVNNKRKKLSTSFPDFVDRILALQGNSPLDKFSLKMVDGHDPVDPDSVV 126
Query: 107 RWISNAVKRKVQELDISLRLGK--RFPLPHILFTSESLITLKLEMRCALHIP-RSICFPK 163
WI + R V +L + + + + PLP +F SE+L+ L +++R I + + PK
Sbjct: 127 PWIHKVLVRGVSDLHLVVDMNEWTSDPLPSRIFLSETLVKLTIKIRDGPFIDVKHVHLPK 186
Query: 164 LKSLYLSHAVF-EDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDP 222
LK+LYL +F E++ L SGCPVL+ELV+ + TVS+ TL+ LT
Sbjct: 187 LKTLYLQSVMFDENDIGFRKLLSGCPVLEELVLDGMGSCVWTSFTVSVATLKRLT----- 241
Query: 223 FCPKHLLGCA----------VNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDV---- 268
FC + + V+ NL+ L + N+ + LV+A ID+
Sbjct: 242 FCCQKMSSFGYMHDDENPNNVSFDTPNLVYLEYAQVIANNYPKVNFDLLVEAKIDIWMTV 301
Query: 269 -----PSLWPSEGQKVALCAAKLLHGILRVKSLVLTEHATEVVKF 308
L +E + A + G+ V+ L L+ EV+ +
Sbjct: 302 DQIREVRLRKNEVNCMVGNATDFIVGLRNVRVLYLSPETLEVLTY 346
>AT1G78750.1 | Symbols: | F-box family protein |
chr1:29613122-29614695 REVERSE
Length = 458
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 147/321 (45%), Gaps = 21/321 (6%)
Query: 1 MRQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
+R + +D IS LPE +L +L +LP KD+V++S+LS RW+ WK P ++
Sbjct: 9 VRAKGSREVDWISNLPETLLCQVLFYLPTKDVVKSSVLSSRWRNLWKYVPGFNLSYCDFH 68
Query: 61 FKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD----VCRWISNAVKRK 116
+N S L R V + ++ C++ FRL S + RWI++ V RK
Sbjct: 69 VRNTFSYDHNTFL-RFVDSFMGFNSQSCLQSFRLEYDSSGYGEPKLALIRRWINSVVSRK 127
Query: 117 VQELDISLRL--GKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVF 174
V+ L + F +P L+T E+L+ L L+ +L P+ + P LK L+LS F
Sbjct: 128 VKYLGVLDDSCDNYEFEMPPTLYTCETLVYLTLD-GLSLASPKFVSLPSLKELHLSIVKF 186
Query: 175 EDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLG--CA 232
D +L L S CPVL+ L I + + E V +L + T D +L
Sbjct: 187 ADHMALETLISQCPVLENLNINRSFCDDFEFTCVRSQSLLSFTHVAD---TDEMLNEDLV 243
Query: 233 VNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDV-------PSLWPSEGQKVALCAAK 285
V I A L L + +F DL SLV+A ID P++ K +
Sbjct: 244 VAIDAPKLKYLRLSDHRIASFILNDLASLVEADIDTVFNLICKKMFNPNDLNKRNMI-RD 302
Query: 286 LLHGILRVKSLVLTEHATEVV 306
L GI +K+L++ EV+
Sbjct: 303 FLVGISSIKTLIIASSTLEVI 323
>AT5G56370.2 | Symbols: | F-box family protein |
chr5:22836200-22837619 REVERSE
Length = 421
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS+LP++ L ILS LP KD++ TS+LSKRW+Y WK P+ + + N G
Sbjct: 1 MDSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYSLID----KNADHG 56
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
+ R V + L + +E L+L E D+ W+ AV++ + ELD K
Sbjct: 57 ---TFVRFVDRSLLLSMAPVLESLHLKLGRQCSEVDIGFWVRIAVEKGLCELDFDYEHYK 113
Query: 129 RFP--LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
P LP LFT +L LKL+ + +CF LK+L+L + +F D+++ L S
Sbjct: 114 TEPCRLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFKLLKTLHLEYVIFLDKETPQKLLSS 173
Query: 187 CPVLQ 191
CP+L+
Sbjct: 174 CPILE 178
>AT5G56370.1 | Symbols: | F-box family protein |
chr5:22836200-22837619 REVERSE
Length = 421
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS+LP++ L ILS LP KD++ TS+LSKRW+Y WK P+ + + N G
Sbjct: 1 MDSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYSLID----KNADHG 56
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
+ R V + L + +E L+L E D+ W+ AV++ + ELD K
Sbjct: 57 ---TFVRFVDRSLLLSMAPVLESLHLKLGRQCSEVDIGFWVRIAVEKGLCELDFDYEHYK 113
Query: 129 RFP--LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
P LP LFT +L LKL+ + +CF LK+L+L + +F D+++ L S
Sbjct: 114 TEPCRLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFKLLKTLHLEYVIFLDKETPQKLLSS 173
Query: 187 CPVLQ 191
CP+L+
Sbjct: 174 CPILE 178
>AT1G55030.1 | Symbols: | F-box family protein |
chr1:20530417-20531768 REVERSE
Length = 422
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 13/232 (5%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D+IS LPE ++ IL LP K + TS+LSK+W+ WK P+ +FD+
Sbjct: 9 DMISQLPEPLILQILGSLPTKVAITTSVLSKQWQSHWKMMPKLEFDSFLRRLDLENVTKC 68
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK- 128
+S + V Q S K RL R + + D+ I A+ R V++L + + +
Sbjct: 69 LLSHKAPVLQTFSL-------KVRLDRRNNAV--DIGCLIGIAMTRNVRKLVLEVYFHRG 119
Query: 129 RFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCP 188
F P L+ E+L TL+L + + +P S+ LK+LYL F+D++S+ L SGCP
Sbjct: 120 TFTFPRSLYHCETLETLELILNVVMDVPPSVYLKSLKTLYLLAVDFKDDESVINLLSGCP 179
Query: 189 VLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNL 240
LQ+LV+ V+ T+++P+L+ L I+ P+H C I+ +L
Sbjct: 180 NLQDLVMRRNSSSNVKTFTIAVPSLQRLAIHNGSGTPQH---CGYTINTPSL 228
>AT5G56420.2 | Symbols: | F-box family protein |
chr5:22850863-22852334 REVERSE
Length = 422
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 121/215 (56%), Gaps = 14/215 (6%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFD-AMSDDFKNNRSQG 68
D +S LP++ L ILS+LP KD++ TSLLSKRW++ W PR ++D + D+ SQ
Sbjct: 6 DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPRFSQF 65
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSV---IESDVCRWISNAVKRKVQELDISLR 125
++ SL +H+ + +E +++ GS+ E DV W+ V R V+EL +S
Sbjct: 66 VDRSLL--LHK------APTLESLNIKI-GSICFTAEKDVGVWVRIGVDRFVRELSVSYC 116
Query: 126 LGKR-FPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLF 184
G+ LP LFT +L LKLE +CF LK+L+L + D++SL +
Sbjct: 117 SGEEPIRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRII 176
Query: 185 SGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIY 219
S C L++LV+ + V+ VTV+ P+L+TL+++
Sbjct: 177 SSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSLH 211
>AT5G56420.1 | Symbols: | F-box family protein |
chr5:22850863-22852334 REVERSE
Length = 422
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 121/215 (56%), Gaps = 14/215 (6%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFD-AMSDDFKNNRSQG 68
D +S LP++ L ILS+LP KD++ TSLLSKRW++ W PR ++D + D+ SQ
Sbjct: 6 DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPRFSQF 65
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSV---IESDVCRWISNAVKRKVQELDISLR 125
++ SL +H+ + +E +++ GS+ E DV W+ V R V+EL +S
Sbjct: 66 VDRSLL--LHK------APTLESLNIKI-GSICFTAEKDVGVWVRIGVDRFVRELSVSYC 116
Query: 126 LGKR-FPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLF 184
G+ LP LFT +L LKLE +CF LK+L+L + D++SL +
Sbjct: 117 SGEEPIRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRII 176
Query: 185 SGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIY 219
S C L++LV+ + V+ VTV+ P+L+TL+++
Sbjct: 177 SSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSLH 211
>AT4G00160.1 | Symbols: | F-box family protein | chr4:63465-65365
FORWARD
Length = 453
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 11/226 (4%)
Query: 1 MRQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
+R V G D IS LP+ +L ILSFLP K +V TS+ SK+W+ WK P +FD S+D
Sbjct: 7 LRIRVVMGKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFD--SED 64
Query: 61 FKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIES-DVCRWISNAVKRKVQE 119
+ + + + V + + +E FRL ++ D+ W+ A R ++E
Sbjct: 65 YDDKE----QYTFSEIVCKSFLSHKAPVLESFRLEFESEKVDPVDIGLWVGIAFSRHLRE 120
Query: 120 LDI---SLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFED 176
L + G F P L T +L TL+L + + I + L++L+L ++D
Sbjct: 121 LVLVAADTGTGTAFKFPSSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLELVSYKD 180
Query: 177 EKSLNLLFSGCPVLQELVIYCWYWETVENVTV-SLPTLRTLTIYYD 221
E S+ L SGCP+L+EL++ +E T+ +P+L+ LTI D
Sbjct: 181 ESSIRNLLSGCPILEELLVIRGEDSDIEVFTIDEVPSLKRLTINDD 226
>AT3G52680.2 | Symbols: | F-box family protein |
chr3:19527075-19528838 FORWARD
Length = 456
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 123/239 (51%), Gaps = 14/239 (5%)
Query: 1 MRQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
+R V G D IS LP+ +L ILS LP +V TS+LSK+W+ WK P +FD SDD
Sbjct: 12 LRIRVVMGKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFD--SDD 69
Query: 61 FKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQEL 120
+++ E+ V + + +E FRL+ + D+ W+ A R ++EL
Sbjct: 70 YESEHYTFSEI-----VCKSFLSHKAPVLESFRLKFV-NFNPVDIGLWVGIAFSRHLREL 123
Query: 121 DISL---RLGK--RFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFE 175
+ LGK F P L T +L TLKL + + IP + L++L+L ++
Sbjct: 124 VLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYK 183
Query: 176 DEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVN 234
DE S+ L SGCP L+EL +Y ++ T+ +P+L+ LTI+ + P+ G +N
Sbjct: 184 DESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPE-FWGYVIN 241
>AT3G52680.1 | Symbols: | F-box family protein |
chr3:19527075-19528838 FORWARD
Length = 456
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 123/239 (51%), Gaps = 14/239 (5%)
Query: 1 MRQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
+R V G D IS LP+ +L ILS LP +V TS+LSK+W+ WK P +FD SDD
Sbjct: 12 LRIRVVMGKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFD--SDD 69
Query: 61 FKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQEL 120
+++ E+ V + + +E FRL+ + D+ W+ A R ++EL
Sbjct: 70 YESEHYTFSEI-----VCKSFLSHKAPVLESFRLKFV-NFNPVDIGLWVGIAFSRHLREL 123
Query: 121 DISL---RLGK--RFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFE 175
+ LGK F P L T +L TLKL + + IP + L++L+L ++
Sbjct: 124 VLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYK 183
Query: 176 DEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVN 234
DE S+ L SGCP L+EL +Y ++ T+ +P+L+ LTI+ + P+ G +N
Sbjct: 184 DESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPE-FWGYVIN 241
>AT5G41630.1 | Symbols: | F-box family protein |
chr5:16650282-16651835 FORWARD
Length = 455
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 111/225 (49%), Gaps = 17/225 (7%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFD---AMSDDFKNN 64
G DIIS LP+ ++ +ILSFLP + V T++L+KRWK DFD + N
Sbjct: 10 GRDIISDLPDALIGHILSFLPTIEAVATTVLAKRWKPLLSFVHSLDFDDSLCLHPAKTNE 69
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
+ S R V VL+ + I KFRL + + E V WI N +KR V ++ + +
Sbjct: 70 EKRTNATSFMRFVDGVLALQGNARINKFRLNGKHIINERWVLDWIQNVLKRDVSDIRLYV 129
Query: 125 RL------GKRFPLPHILFTSESLITL--KLEMRCALHIPRSICFPKLKSLYLSHAVFED 176
+ LP +F S++L+TL E + + R + PKLK+L+L H +
Sbjct: 130 SSCSDGFDSSFYHLPPEIFVSQTLVTLIIMFEGDINISVGREVSLPKLKTLHLYHFKIK- 188
Query: 177 EKSLNLLFSGCPVLQELVIYCWYWETVEN-----VTVSLPTLRTL 216
+ N L SGC L+EL++ W W+ VT+ LP L+ L
Sbjct: 189 LSTFNKLISGCHALEELMMINWKWDESSEPEPCFVTIYLPNLKIL 233
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE
Length = 737
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 153/323 (47%), Gaps = 35/323 (10%)
Query: 7 DGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWK--YKWKSNPRYDFDAMSDDFKNN 64
+ D+IS LP+EVL ILS + K+ V TS+LSKRWK + SN D K N
Sbjct: 2 NAKDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQN 61
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLR----LRGSVIESDVCRWISNAVKRKVQEL 120
R + + + V ++L I+K L+ +RG S + WI N + V +L
Sbjct: 62 RIE-IHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDL 120
Query: 121 DISLRL-GKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVF-EDEK 178
D+ + L GK P+P ++F S++L+ L++ + + + + P L++L L F
Sbjct: 121 DVFITLKGKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNFVGGHN 180
Query: 179 SLNLLFSGCPVLQELVI---YCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNI 235
+ L S CPVL+ELV+ C W +VS P+L+ L I +D ++++
Sbjct: 181 VVGTLISRCPVLEELVVEERRCVDW----TCSVSSPSLKRLHIRFDRKF------TSISL 230
Query: 236 SARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAA----------K 285
A NLI + + + L SL++A ++ L E + V +
Sbjct: 231 DAPNLIYYKHSGYVLGKYPNVKLDSLIEARLN---LRMDETRMVGVRNGSLGSIPADMRN 287
Query: 286 LLHGILRVKSLVLTEHATEVVKF 308
L++GI V+ L L+ H E++ F
Sbjct: 288 LINGIRNVRILHLSSHTLELLYF 310
>AT3G59160.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G59170.1); Has
1270 Blast hits to 1227 proteins in 8 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1270;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:21875023-21876641 FORWARD
Length = 464
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 158/345 (45%), Gaps = 54/345 (15%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG- 68
D+I+ LP+ +L ++LS+L K+ TSLLS+RW+Y P +FD + ++ R +
Sbjct: 13 DMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLHRDKRVKNP 72
Query: 69 -------------------MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD---VC 106
+ S V ++L + ++KF L++ D V
Sbjct: 73 LHEKGLVGFVLTVDDKRKKLSTSFPDFVDRILDLQGNSPLDKFSLKMVDDHDPVDPDCVA 132
Query: 107 RWISNAVKRKVQELDISLRLGKRFPLPHILFTSESLITLKLEMRCALHIP-RSICFPKLK 165
WI + R V +L + + + + LP +F +E+L+ L L++R I + + PKLK
Sbjct: 133 PWIHKVLVRGVSDLHLVIDMNEWTSLPAKIFLTETLVKLTLKIRDGPPIDVKHVHLPKLK 192
Query: 166 SLYLSHAVFEDEK-SLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFC 224
+L+L +F++E + L SGCP L+ELV++ + + +VS+ TL+ LT FC
Sbjct: 193 TLHLESVMFDEEDIGFSKLLSGCPELEELVLHHIWSCVWTSCSVSVATLKRLT-----FC 247
Query: 225 PKHLLGCA--------VNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEG 276
++ C V+ NL+ L + N+ + SLV+A ID+ W +
Sbjct: 248 CNNMKFCGMHEENPNNVSFDTPNLVYLEYAEVIANNYPKVNFDSLVEAKIDI---WMTND 304
Query: 277 Q-------------KVALCAAKLLHGILRVKSLVLTEHATEVVKF 308
Q + A L+ GI V+ L L+ EV+ +
Sbjct: 305 QLDEVRIRDIYEKNVMVGNATDLIVGIRNVRVLCLSADTLEVLTY 349
>AT3G03040.1 | Symbols: | F-box family protein | chr3:684685-686277
FORWARD
Length = 472
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 114/220 (51%), Gaps = 15/220 (6%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMS----DDFKNN 64
MD++S LP+EV ILSFL K+ TS+LSK+W+ + P DFD ++ K
Sbjct: 1 MDLLSSLPDEVRCLILSFLTTKESASTSVLSKKWRNLFALVPNLDFDDSEFLHPEEGKRE 60
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
R G+ S V +VLS + I KF L+ V + V RW+ ++R V ++D+++
Sbjct: 61 RD-GILQSFMDFVDRVLSLQGNSSIRKFSLKCETGVPPARVNRWLCEVLQRDVSDIDLTI 119
Query: 125 RLGKRFPLPHILFTSESLITLKLEMRCALHI-----PRSICFPKLKSLYLSHA-VFEDEK 178
LG + LP LF SE+L+ LKL + A +I P LKSL + VF D++
Sbjct: 120 DLGYGYYLPEELFVSETLVNLKL--KSAFNIDWWPGAEGTSLPMLKSLCVYGVRVFCDDE 177
Query: 179 SLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
L L PVL+EL + W + TVS TL TL I
Sbjct: 178 -LQELLPCFPVLEELQMSNMQWLDSDE-TVSSATLTTLHI 215
>AT3G49150.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: protein insertion into membrane; LOCATED
IN: integral to membrane; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566), 60 kDa inner membrane insertion
protein (InterPro:IPR001708), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G59240.1); Has
1228 Blast hits to 1197 proteins in 21 species: Archae -
0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 1199;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:18218858-18221877 FORWARD
Length = 630
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 146/311 (46%), Gaps = 20/311 (6%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
DIIS LPE ++ +ILSFLP++D TS+LSK+W++ + P +FD + + N +
Sbjct: 16 DIISDLPEALICHILSFLPIEDSALTSVLSKKWQHLFAFRPNLEFDD-AVVYLNPDGERN 74
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDIS-LRLGK 128
E + V +VLS I KF L R + V RWISN ++R V +LD+ +
Sbjct: 75 ETIFENFVDRVLSLQGDYPINKFSLTCRDFTDPTCVSRWISNVMERGVSDLDLRCIVYWD 134
Query: 129 RFPLPHILFTSESLITLKLEMRCALHIP-RSICFPKLKSLYLSHAVFE-DEKSLNLLFSG 186
+P +F S++L+ L++E I + P LK+LYL+ + + L +
Sbjct: 135 NGTMPPDIFVSKALVHLRIETGNGAFIDVEDVFLPNLKTLYLNKVLLRHSDNGFVKLITS 194
Query: 187 CPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPK-HLLGC-AVNISARNLISLH 244
C VL++L I W+ ++S TL+ LT FC H + +V+ NL+
Sbjct: 195 CHVLEDLFIMNICWDGYLKRSLSSKTLKRLTF----FCEDVHAVNPESVSFDTPNLVYFV 250
Query: 245 CTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALC-------AAKLLHGILRVKSLV 297
C+ + + SLV A I L + Q+ A L GI V+ L
Sbjct: 251 YHDCVADKYKNMNFDSLVYASI---CLQMTSHQRTHASYEHLVGNATDFLLGISNVQILE 307
Query: 298 LTEHATEVVKF 308
L + EV+ F
Sbjct: 308 LFANTIEVLTF 318
>AT2G26860.2 | Symbols: | F-box family protein |
chr2:11452421-11453584 REVERSE
Length = 355
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 116/222 (52%), Gaps = 17/222 (7%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS LP+E+L IL LP K++V TS+LSKRW++ W P+ F N +
Sbjct: 1 MDRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVM-------NHYES 53
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLR-LRGSVIESDVCRWISNAVKRKVQELDISL--- 124
++ +Q + + L IE F L+ S D+ W+ + R+V+EL I+
Sbjct: 54 -DLPIQDFITKNLRLLKPQVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDL 112
Query: 125 ----RLGKRFPLPHILFTSESLITLKL-EMRCALHIPRSICFPKLKSLYLSHAVFEDEKS 179
+ LP+ L+T SL+TLKL + +PR++ P LK+L L + +E+S
Sbjct: 113 SWLDKPVVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSVAYSNEES 172
Query: 180 LNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
L LL S CPVL++L I+ + V+ + + +P+L L + D
Sbjct: 173 LRLLLSYCPVLEDLTIHRDMHDNVKTLVIIVPSLLRLNLPID 214
>AT2G26860.1 | Symbols: | F-box family protein |
chr2:11452196-11453584 REVERSE
Length = 405
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS LP+E+L IL LP K++V TS+LSKRW++ W P+ F + + ++++
Sbjct: 1 MDRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTF--VMNHYESD---- 54
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLR-LRGSVIESDVCRWISNAVKRKVQELDISL--- 124
+ +Q + + L IE F L+ S D+ W+ + R+V+EL I+
Sbjct: 55 --LPIQDFITKNLRLLKPQVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDL 112
Query: 125 ----RLGKRFPLPHILFTSESLITLKL-EMRCALHIPRSICFPKLKSLYLSHAVFEDEKS 179
+ LP+ L+T SL+TLKL + +PR++ P LK+L L + +E+S
Sbjct: 113 SWLDKPVVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSVAYSNEES 172
Query: 180 LNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
L LL S CPVL++L I+ + V+ + + +P+L L + D
Sbjct: 173 LRLLLSYCPVLEDLTIHRDMHDNVKTLVIIVPSLLRLNLPID 214
>AT5G62970.1 | Symbols: | F-box family protein |
chr5:25272033-25273537 FORWARD
Length = 449
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 116/243 (47%), Gaps = 32/243 (13%)
Query: 9 MDIISVLPE-EVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPR--YDFDAMSD---DFK 62
MD IS + E+L ILSFLP K + TS+LSK+WK+ W P+ YD D+M F+
Sbjct: 1 MDKISGFSDDELLVKILSFLPFKFAITTSVLSKQWKFLWMRVPKLEYDEDSMYSFEYSFR 60
Query: 63 NNRSQGMEMS-------------LQRSVHQVLSCDNSDCIEKFRLRLRGSVIE-SDVCRW 108
+ E+ ++ + + L +S IE RL+ V + D+ W
Sbjct: 61 YFLPKAKEVDSETYSIVSESGHRMRSFIEKNLPLHSSPVIESLRLKFFTEVFQPEDIKLW 120
Query: 109 ISNAVKRKVQELDISLRLGKRFP-------LPHILFTSESLITLKLEMRCALHIPRSICF 161
+ AV R QEL + FP LP L+T +SL+TLKL + +P
Sbjct: 121 VEIAVSRCAQELSVDF-----FPKEKHNALLPRNLYTCKSLVTLKLRNNILVDVPHVFSL 175
Query: 162 PKLKSLYLSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
P LK L+L + D +SL L S C VL++LV+ + V + V +P+L +L+
Sbjct: 176 PSLKILHLERVTYGDGESLQRLLSNCSVLEDLVVELDTGDNVRKLDVIIPSLLSLSFGMS 235
Query: 222 PFC 224
+C
Sbjct: 236 RYC 238
>AT5G56380.1 | Symbols: | F-box family protein |
chr5:22838836-22840353 REVERSE
Length = 439
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 151/318 (47%), Gaps = 36/318 (11%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS L +E+L ILSFL KD+++T LLSKR+K +W P+ +FD D + G
Sbjct: 1 MDRISHLADEILSKILSFLGTKDVMQTMLLSKRFKSQWLLVPKLEFD---DSTHLPETWG 57
Query: 69 ME----MSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
+ + +R V + L ++ L+L D+ W+ AVKR + EL +
Sbjct: 58 YQEPDYGNFRRFVDRSLLSREGRVLQTLFLKLGRQCSYDDIAIWVGIAVKRGLMELKLKY 117
Query: 125 R---LGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLN 181
KR LP L+T E+L+ LKL+ + L +P +C LK+L L + + L
Sbjct: 118 TDSYYPKRSSLPRSLYTCETLVVLKLK-KGYLDVPDLVCLRSLKTLSLRDMNYSNASCLL 176
Query: 182 LLFSGCPVLQELVIYCWYWETVE-NVTVSLPTLRTLTIYYDPFCPKHLLG---------- 230
L + CPVL+EL I Y+++ + + LP L+ L+ Y P K G
Sbjct: 177 RLLASCPVLEELFIQQGYYDSCALSFKIILPCLKKLS--YLPKRKKKYSGIDRSEVSGGI 234
Query: 231 CAVNISARNLISLHCT--SCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLH 288
+ + A +L LH S L ++ ++V A ++V + P KLL+
Sbjct: 235 SGLVLDAPSLKYLHIVDRSGLFSVSEIININAVVKATLEVNASRPE----------KLLY 284
Query: 289 GILRVKSLVLTEHATEVV 306
++ V+ + L ATEVV
Sbjct: 285 SLVSVEHIRLCLSATEVV 302
>AT5G60610.1 | Symbols: | F-box family protein |
chr5:24364049-24365386 FORWARD
Length = 388
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 113/222 (50%), Gaps = 19/222 (8%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS LP+E+L I+SF+P K V TS+LSKRW+ WK P+ + D ++ +
Sbjct: 1 MDRISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVPKLECDCTEPALRDFILKN 60
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRL-RGSVIESDVCRWISNAVKRKVQELDISLRLG 127
+ + + IE LR R S + D+ W A+ ++EL I
Sbjct: 61 LPL-------------QARIIESLYLRFRRESFLFQDIKLWGGIAISHCLRELRIDFFSH 107
Query: 128 KRFP---LPHILFTSESLITLK-LEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
P LP L+T +SL+TLK L + + +PR +C P LK+L L + +E L LL
Sbjct: 108 YANPYVILPRSLYTCKSLVTLKLLGLGIRVDVPRDVCLPSLKTLLLQCVAYSEEDPLRLL 167
Query: 184 FSGCPVLQELVIYCWYW-ETVENVTVSLPTLRTLTIYYDPFC 224
S CPVL++LVI + V+ + V +PTL+ L++ C
Sbjct: 168 LSCCPVLEDLVIELDDANQNVKALVVIVPTLQCLSLKIPASC 209
>AT5G22670.1 | Symbols: | F-box family protein |
chr5:7538192-7539685 REVERSE
Length = 443
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 114/217 (52%), Gaps = 13/217 (5%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
D IS+LP+++L ILS LP K VRTS+LSKRWK S P +F+ +
Sbjct: 9 SQDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEFNV-------SEFH 61
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIE-SDVCRWISNAVKRKVQELDISL-- 124
G R VH L CI K +L + S + +WI NAVKRKVQ LDI
Sbjct: 62 GY-YEFARVVHGFLDTSRETCIHKLKLAFEKKQHDRSYLTQWIHNAVKRKVQHLDIGRWS 120
Query: 125 RLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLF 184
LG+ +PH L+T E+L++L+L +L + P+LK+++L ++ ++ L L
Sbjct: 121 YLGQEL-IPHSLYTCETLVSLRLH-NVSLPDFDHVSLPRLKTMHLIDNIYPNDALLENLI 178
Query: 185 SGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
S CPVL++L + V+ + V +L++L + D
Sbjct: 179 SSCPVLEDLNVSRDVENIVKVLRVRSLSLKSLILALD 215
>AT4G26350.1 | Symbols: | F-box family protein |
chr4:13326853-13328315 FORWARD
Length = 431
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 16/191 (8%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MDIIS P+ +L ILSF+P KD++ TSLLSKRW W+ P+ ++D +
Sbjct: 1 MDIISQCPDHLLLRILSFIPTKDVIVTSLLSKRWGSLWRWVPKLEYDFTRQN-------- 52
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLR---LRGSVIESDVCRWISNAVKRKVQELDISLR 125
M + V++ L +N+ +E L+ L D+ WI AV R+V+EL+IS+
Sbjct: 53 --MRFVKFVYRSLLQNNAPVLESLHLKNIILYAECRTVDIGGWIDIAVSRRVRELEISIN 110
Query: 126 LG-KRFPLPHILFTSESLITLKLEMR-CAL-HIPRSICFPKLKSLYLSHAVFEDEKSLNL 182
++F LP L+T +L + L ++ C L +P ++C P LK L+L + +L
Sbjct: 111 CSDEKFRLPSSLYTCGTLESFILTIKHCHLVDVPLAVCLPSLKKLHLRCIGWAYNATLLR 170
Query: 183 LFSGCPVLQEL 193
L SGC L+EL
Sbjct: 171 LISGCTNLEEL 181
>AT1G52650.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT4G13960.1); Has
1151 Blast hits to 1117 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1150;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:19610643-19612417 FORWARD
Length = 507
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 149/320 (46%), Gaps = 31/320 (9%)
Query: 7 DGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAM----SDDFK 62
+ MD +S LPE VL I SFL K+ TS+L KRW+ P D ++ K
Sbjct: 41 EKMDHVSSLPEGVLCNIFSFLTTKEAALTSILCKRWRNLLAFVPNLVIDDSVFLHPEEGK 100
Query: 63 NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDI 122
R + ++ S V +VL+ + I+KF L+ R V WISN + R V ELD+
Sbjct: 101 EERYE-IQQSFMEFVDRVLALQGNSPIKKFSLKFRTDFASHRVNAWISNVLARGVSELDV 159
Query: 123 SLRL-GKRF-PLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSL 180
+ L G F PL F S +L+TLK+ + I P LK+L L +K
Sbjct: 160 LVILYGAEFLPLSPKCFKSRNLVTLKINSLGIDWLAGDIFLPMLKTLVLHSVKLCVDK-- 217
Query: 181 NLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNL 240
F P L+ELV++ W +VTVS +++TLTI ++ + LG +++ +L
Sbjct: 218 -FFFRALPALEELVLFAVSWRD-RDVTVSNASIKTLTIKFN-----YYLG-TLSLDTPSL 269
Query: 241 ISLHCTSCLTINFSFCDLFSLVDAYIDV------------PSLWPSEGQKV--ALCAAKL 286
+S + + ++ + L +A I + P+++ E V + KL
Sbjct: 270 VSFCFSDHVAKDYPLAKMEKLSEARISLLVTEYQIERARAPNIYWVEDDVVLRLVNVGKL 329
Query: 287 LHGILRVKSLVLTEHATEVV 306
+ GI V+ L L+ + EV+
Sbjct: 330 MKGIRNVQYLNLSPNTLEVL 349
>AT3G49030.1 | Symbols: | F-box family protein |
chr3:18173138-18174769 FORWARD
Length = 443
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 149/324 (45%), Gaps = 38/324 (11%)
Query: 2 RQHVTDGM----------DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPR 51
+Q TDG+ D IS LPE++L ILS +P ++++ TS+LSKRW+ WK P
Sbjct: 3 QQLKTDGLNLSIRDAVKEDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPN 62
Query: 52 YDFDAMSDDFKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISN 111
FD F Q +L RS L+ + +E +L + ++ WI+
Sbjct: 63 LTFDFT---FDPKYHQTFSENLYRS----LTSHEASVLESLQLNFTRGIDGLNIGMWIAT 115
Query: 112 AVKRKVQELDISLRLG----KRFPLPHILFT-SESLITLKLEMRCALHIPRSICFPKLKS 166
A R V++L + + G KR LF +++L L+++ L +P +C L+
Sbjct: 116 AYVRHVRKL-VLVSFGDVRDKRARFRSALFNFNDTLDILEIQDYILLDLPSPVCLKSLRE 174
Query: 167 LYLSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPK 226
L L F+DE S+ L GCP L+ L ++ VE T+ +P+L+ LTIY FC
Sbjct: 175 LRLYEVHFKDEASVCNLLCGCPSLEVLSVHRERNVDVETFTIVVPSLQRLTIY--DFCIG 232
Query: 227 HLLGCAVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVA-LCAAK 285
G V I+A +L L+ ++F + + P L +E V+ +
Sbjct: 233 GGKGGYV-INAPSLKYLNIVGFEGLDFCLIE---------NAPELVEAEISDVSHIANEN 282
Query: 286 LLHGILRVKSLVLTEHATEVVKFP 309
+L + VK L L +KFP
Sbjct: 283 ILESLTSVKRLSLESPIK--IKFP 304
>AT3G52670.1 | Symbols: | F-box family protein |
chr3:19525247-19526737 FORWARD
Length = 384
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 45/288 (15%)
Query: 1 MRQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
MR D ++ LPE+++ ILSFLP + ++ TS+LSK+W+ WK P +FD SDD
Sbjct: 1 MRNQGFTKEDRMNQLPEDLILRILSFLPTELVIATSVLSKQWRSLWKLVPNLEFD--SDD 58
Query: 61 FKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQEL 120
++ N D+ WI A R ++EL
Sbjct: 59 YEIN-------------------------------------PVDIGLWIGIAFARHLREL 81
Query: 121 DISLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSL 180
+ + + F P L +L TLKL + + IP + L++L+L ++DE+S+
Sbjct: 82 VLYVAPKQTFTFPSSLCICNTLETLKLILGIHVDIPCPVLLKSLRTLHLDSVSYKDEESI 141
Query: 181 NLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNL 240
L S CP+L+ LV+Y YW V N + +P+L+ L I D K +N+
Sbjct: 142 RNLLSSCPILENLVVYE-YWYNVVNFDIEVPSLKRLEI-CDVLHKKEFRRYTINVPCLKY 199
Query: 241 ISLHCTSCLTINFSFC-DLFSLVDAYIDVPSLWPSEGQKVALCAAKLL 287
+ + L +F C + LV+AY SL ++ +L +AK L
Sbjct: 200 LRIE---GLNKDFELCLNAPELVEAYFTKGSLIIADKFLGSLKSAKRL 244
>AT5G56690.1 | Symbols: | F-box family protein |
chr5:22939723-22941099 FORWARD
Length = 402
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
M IS LP+++L IL+FLP K + TS+LSK+W++ W P+ +D D S
Sbjct: 1 MAEISGLPDDLLVKILAFLPTKVAISTSVLSKQWRFLWMWLPKLKYDDYDDITDGFNSVS 60
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLR-GSVIESDVCRWISNAVKRKVQELDISLRLG 127
+ + + + L + IE L R G++ D+ W+ AV R V+EL I
Sbjct: 61 AFQTYRDFIAKNLPLHRAPIIESLSLGFRCGTLQPEDLKSWVEVAVSRSVRELSILAYYR 120
Query: 128 KRFPL-PHILFTSESLITLKLEMRCALHIPRSIC-FPKLKSLYLSHAVFEDEKSLNLLFS 185
+ L L+T +SL+TLK + +P ++C P L++L L + +E SL +L S
Sbjct: 121 NNYALSSSSLYTCKSLVTLK-GFNIRVDVPPTVCLLPSLRTLELKRVRYLNEDSLRMLLS 179
Query: 186 GCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
CPVL+ L I + + + V +P+LR L++
Sbjct: 180 FCPVLEYLSIERHDNDNLRGLVVDVPSLRRLSL 212
>AT1G16930.1 | Symbols: | F-box family protein |
chr1:5789987-5791534 FORWARD
Length = 449
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 153/311 (49%), Gaps = 30/311 (9%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LP+ +L ILS L K+ V TS+LSKRW+ W P D D S++F ++
Sbjct: 15 DRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLD--SNNFPDDDV--- 69
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCR---WISNAVKRKV------QEL 120
V++ L +N +E+F+L V E D R WI+ +KR+V E+
Sbjct: 70 ---FVSFVNRFLGSENEQHLERFKLIYE--VNEHDASRFKSWINAVIKRRVCHFNVHNEV 124
Query: 121 DISLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSL 180
D L K +P L++ E L+ L+L R AL P S+ P +K ++L ++ + +L
Sbjct: 125 DDDDELVK---MPLSLYSCERLVNLQL-YRVALDHPESVSLPCVKIMHLDMVKYDADSTL 180
Query: 181 NLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPF-CPKHLLGC-AVNISAR 238
+L SGCPVL+EL I +++E V V +L++ I + + H++ A +
Sbjct: 181 EILISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKIDSERYESQNHVVTIDAPRLEYM 240
Query: 239 NLISLHCTSCLTIN---FSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGILRVKS 295
NL S + N F+ D+ + + + P L P + K+A+ K L G+ V
Sbjct: 241 NLCDHRSDSFIIHNIGPFAKVDIDVIFNVEYNDP-LEPDDSSKIAML-GKFLTGLSTVSE 298
Query: 296 LVLTEHATEVV 306
+V++ +V+
Sbjct: 299 MVISSDTLQVI 309
>AT1G06630.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G60040.1). |
chr1:2028071-2030344 FORWARD
Length = 461
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 152/315 (48%), Gaps = 32/315 (10%)
Query: 6 TDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDF-DAMSDDFKNN 64
T D I+ LP+E+L ILS L K V TS+LSK+W+ +K +F D++S +
Sbjct: 8 TGPRDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQE 67
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD------VCRWISNAVKRKVQ 118
S S + V + ++ I K L L+ V D V RWISN V R V
Sbjct: 68 ASYVFPESFKDLVDRTVALQCDYPIRK--LSLKCHVGRDDEQRKACVGRWISNVVGRGVS 125
Query: 119 ELDISLRLGKR---FPLPHILFTSESLITLKLEMRCAL-HIPRSICFPKLKSLYLSHAVF 174
E + LR+ R F P +L T ++L+ L L R L +P + P LK L++ F
Sbjct: 126 E--VVLRINDRGLHFLSPQLL-TCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFF 182
Query: 175 EDEKSL-NLLFSGCPVLQELVIYCWYWETVENV--TVSLPTLRTLTIYYDPFCPKHLLGC 231
+D L N+L +GCPV++ L + + E++ T+S PTL+ L+++Y+ +
Sbjct: 183 DDFGELSNVLLAGCPVVEAL----YLNQNGESMPYTISSPTLKRLSVHYE-----YHFES 233
Query: 232 AVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGIL 291
++ NL L + + +L SLV+AY+++ E V KL+ GI
Sbjct: 234 VISFDLPNLEYLDYSDYALYGYPQVNLESLVEAYLNLDKAEHVESPDV----TKLIMGIR 289
Query: 292 RVKSLVLTEHATEVV 306
V+ L L+ + V+
Sbjct: 290 NVEILSLSPDSVGVI 304
>AT1G06630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G60040.1); Has
1188 Blast hits to 1155 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1187;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
| chr1:2028071-2031173 FORWARD
Length = 477
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 152/315 (48%), Gaps = 32/315 (10%)
Query: 6 TDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDF-DAMSDDFKNN 64
T D I+ LP+E+L ILS L K V TS+LSK+W+ +K +F D++S +
Sbjct: 8 TGPRDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQE 67
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD------VCRWISNAVKRKVQ 118
S S + V + ++ I K L L+ V D V RWISN V R V
Sbjct: 68 ASYVFPESFKDLVDRTVALQCDYPIRK--LSLKCHVGRDDEQRKACVGRWISNVVGRGVS 125
Query: 119 ELDISLRLGKR---FPLPHILFTSESLITLKLEMRCAL-HIPRSICFPKLKSLYLSHAVF 174
E + LR+ R F P +L T ++L+ L L R L +P + P LK L++ F
Sbjct: 126 E--VVLRINDRGLHFLSPQLL-TCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFF 182
Query: 175 EDEKSL-NLLFSGCPVLQELVIYCWYWETVENV--TVSLPTLRTLTIYYDPFCPKHLLGC 231
+D L N+L +GCPV++ L + + E++ T+S PTL+ L+++Y+ +
Sbjct: 183 DDFGELSNVLLAGCPVVEAL----YLNQNGESMPYTISSPTLKRLSVHYE-----YHFES 233
Query: 232 AVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGIL 291
++ NL L + + +L SLV+AY+++ E V KL+ GI
Sbjct: 234 VISFDLPNLEYLDYSDYALYGYPQVNLESLVEAYLNLDKAEHVESPDV----TKLIMGIR 289
Query: 292 RVKSLVLTEHATEVV 306
V+ L L+ + V+
Sbjct: 290 NVEILSLSPDSVGVI 304
>AT3G03030.1 | Symbols: | F-box family protein | chr3:682252-683850
FORWARD
Length = 474
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 26/321 (8%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMS----DDFKNN 64
MD++S LP++V +ILSFL K+ TS+LSK+W+ + P D D ++ K
Sbjct: 1 MDLVSSLPDDVRCHILSFLTTKESALTSVLSKKWRNLFTLVPNLDLDDSEYLHPEETKWE 60
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
R + ++ S V +VLS + I +F LR V + + RW+ ++R V +L++ +
Sbjct: 61 REEILD-SFLDFVERVLSLQGNGPIRRFSLRCESGVPPARLNRWLCKVLQRGVADLELII 119
Query: 125 RLGKRFPLPHILFTSESLITLKL--EMRCALHIP--RSICFPKLKSLYLSHA-VFEDEKS 179
+ LP LF SE+L+ L+L E C P P+L+SL +S A VF D+K
Sbjct: 120 DFEDGYLLPRELFVSETLVNLRLKSEFGCIHWWPGAEGTFLPRLQSLDISSAMVFCDDK- 178
Query: 180 LNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARN 239
L L PV++EL + W +VTVS TL + +V+ N
Sbjct: 179 LQKLLPCFPVIEELRLVGMEW-IDSHVTVSCATLTNQLLLSSTGSRTSKNPKSVSFDTPN 237
Query: 240 LISLHCTSCLTINFSFCDLFSLVDAYI------------DVPSLWPSEGQKVALCA--AK 285
L+SL + + ++ ++ SL A I P+ + SE V K
Sbjct: 238 LLSLAYSDLVAEDYPLVNMKSLFKARIILGVDDDQIARMRAPTNYLSEDDVVRRFGNVVK 297
Query: 286 LLHGILRVKSLVLTEHATEVV 306
L+ GI V+ L L EV+
Sbjct: 298 LMKGIQNVQQLHLHSDTLEVL 318
>AT3G44810.1 | Symbols: | F-box family protein |
chr3:16358496-16359983 REVERSE
Length = 448
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 141/300 (47%), Gaps = 13/300 (4%)
Query: 15 LPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM---EM 71
LP+E+L ++LS L K TS+LSKRW+ + DFD Q M +
Sbjct: 12 LPDELLVHVLSSLETKQAASTSVLSKRWRTLFAVRRNLDFDDSIISHPEVGEQNMDDVQE 71
Query: 72 SLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL----RLG 127
S + V + L+ S I KF L + V RWI+ A++ V EL + L R
Sbjct: 72 SFRDFVDKRLAFQGSVPINKFSLIYGDKHDDVRVDRWINTALEHGVSELHLCLTSVTRRL 131
Query: 128 KRFPLPHILFTSESLITLKLEMRC-ALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
RF P +F S +L+ L L ++ P C P LK L L F+ K N+L +G
Sbjct: 132 HRF--PSNVFRSTTLVKLTLGTNLFIVYFPSDTCLPVLKILVLDSIWFDRIKFSNVLLAG 189
Query: 187 CPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNLISLHCT 246
CP L++L I + + NV VS T+++L+I Y + V + NL++L +
Sbjct: 190 CPALEDLTIDQKSFPGLPNV-VSSKTVKSLSIVY-KYSADFDWFRTVALDTPNLVTLLYS 247
Query: 247 SCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGILRVKSLVLTEHATEVV 306
+ + C+L SLV+A +D+ L + + L+ + V+ L LT ATEV+
Sbjct: 248 TYARHRYRHCNLESLVNATLDLHFLENCD-EAFEPNVTDLMIAVRNVQMLHLTSSATEVI 306
>AT1G06630.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G60040.1). |
chr1:2028071-2029442 FORWARD
Length = 403
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 152/315 (48%), Gaps = 32/315 (10%)
Query: 6 TDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDF-DAMSDDFKNN 64
T D I+ LP+E+L ILS L K V TS+LSK+W+ +K +F D++S +
Sbjct: 8 TGPRDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQE 67
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD------VCRWISNAVKRKVQ 118
S S + V + ++ I K L L+ V D V RWISN V R V
Sbjct: 68 ASYVFPESFKDLVDRTVALQCDYPIRK--LSLKCHVGRDDEQRKACVGRWISNVVGRGVS 125
Query: 119 ELDISLRLGKR---FPLPHILFTSESLITLKLEMRCAL-HIPRSICFPKLKSLYLSHAVF 174
E + LR+ R F P +L T ++L+ L L R L +P + P LK L++ F
Sbjct: 126 E--VVLRINDRGLHFLSPQLL-TCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFF 182
Query: 175 EDEKSL-NLLFSGCPVLQELVIYCWYWETVENV--TVSLPTLRTLTIYYDPFCPKHLLGC 231
+D L N+L +GCPV++ L + + E++ T+S PTL+ L+++Y+ +
Sbjct: 183 DDFGELSNVLLAGCPVVEAL----YLNQNGESMPYTISSPTLKRLSVHYE-----YHFES 233
Query: 232 AVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGIL 291
++ NL L + + +L SLV+AY+++ E V KL+ GI
Sbjct: 234 VISFDLPNLEYLDYSDYALYGYPQVNLESLVEAYLNLDKAEHVESPDV----TKLIMGIR 289
Query: 292 RVKSLVLTEHATEVV 306
V+ L L+ + V+
Sbjct: 290 NVEILSLSPDSVGVI 304
>AT5G38396.1 | Symbols: | F-box family protein |
chr5:15373094-15374726 FORWARD
Length = 462
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 162/331 (48%), Gaps = 37/331 (11%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWK--YKWKSNPRYDFDAM---SDDFKN 63
MD++ +P+E++ +ILSFL K+ TS+LSKRW+ + SN D D++ ++ K
Sbjct: 1 MDLLRNIPDELICHILSFLTTKEAALTSVLSKRWRNLLAFVSNLHID-DSIFLHPEEGKR 59
Query: 64 NRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDIS 123
+R++ + S V ++L+ + ++K ++ + V WISN + R V ELD+S
Sbjct: 60 DRNE-IRQSFLDFVGRILALQGNCPVKKVSIKFLFKLDSDRVDGWISNVLARGVSELDLS 118
Query: 124 LRL--GKRFPLPHILFTSESLITLKLEMRCALH-------IPRSICFPKLKSLYLSHAVF 174
+ L + F L F S++L+ LKL C + I P LK+L L + F
Sbjct: 119 IDLCMDEYFLLSSKRFESKNLVRLKLHRLCIGQREKTVGWLAGEIFLPMLKTLELDYVGF 178
Query: 175 EDEKSLNLLFSGCPVLQELVIYCWYW-ETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAV 233
+ L P L+ELVI +W T +VTVS P+L+TLT+ ++ ++
Sbjct: 179 YGDL---LFLRALPALEELVIVDAFWFTTFTDVTVSNPSLKTLTM------SSNIYSGSI 229
Query: 234 NISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVP--------SLWPSEGQKVAL---C 282
+ +L+ + ++ ++ +L++A I++ + P+ +V L
Sbjct: 230 SFDTPSLVYFSHFKYVAKDYPLVNMENLLEARINLGVTEGQIRRAREPNNNDEVVLRFPN 289
Query: 283 AAKLLHGILRVKSLVLTEHATEVVKFPNRSL 313
KL++GI V+ L L+ + E++ S+
Sbjct: 290 VGKLMNGIRNVQCLDLSANTLEMLSLSCESM 320
>AT3G58940.1 | Symbols: | F-box family protein |
chr3:21781002-21783213 REVERSE
Length = 618
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 142/317 (44%), Gaps = 43/317 (13%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMS----DDFKNN 64
MD +S LPEEV +ILSFLP K TS+LSK W WK D D ++ K
Sbjct: 1 MDRVSNLPEEVRCHILSFLPTKHAALTSVLSKSWLNLWKFETNLDIDDSDFLHPEEGKAE 60
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQEL---- 120
R + + S V VL+ IEKF L+ + V RWI N ++R V +L
Sbjct: 61 RDE-IRQSFVEFVDGVLALQGDSPIEKFSLKCITGIHPDHVNRWICNVLQRGVSDLYLFT 119
Query: 121 ---DISLRLGKRFPLPHILFTSESLITLKLEMRCAL---HIPRSICFPKLKSLYL-SHAV 173
D + LP +F S +L+ LKL + H P LKSL + S +
Sbjct: 120 DFSDEDTEEDGGYRLPQEMFVSRTLVKLKLRSEHCVNWWHWDIGASLPNLKSLNIDSDLI 179
Query: 174 FEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIY---YDPFC-PKHLL 229
F E + S PVL+E+ + W ++ T+S +L L+I+ + F PK
Sbjct: 180 FFGE--MEKFLSSFPVLEEVHMANMEWRELDE-TMSSASLTKLSIHGTGVEEFEHPK--- 233
Query: 230 GCAVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHG 289
+++I NL+ L+ + + ++ D +V + +V KL++G
Sbjct: 234 --SISIDTPNLLYLNYSDLVAEDYPLDDEGDVVLQFCNV---------------VKLING 276
Query: 290 ILRVKSLVLTEHATEVV 306
I +++L LTE EV+
Sbjct: 277 IQNIQTLYLTEDTLEVL 293
>AT3G51530.1 | Symbols: | F-box family protein |
chr3:19112873-19114497 REVERSE
Length = 455
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 19/223 (8%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSD--DFKNNRSQ 67
D IS LPE +L ILS LP K ++ TS+LSKRW WK R +F++ + DF N
Sbjct: 30 DRISELPEVLLLQILSSLPTKLVISTSVLSKRWLSLWKMVQRLEFESSRNIYDFAEN--- 86
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQE--LDISLR 125
V + L + +E L++ V W + A R V+E LD+S
Sbjct: 87 ---------VTRSLLSHKAPVLESLHLKVGDQFDGVYVGVWATIAFTRHVREFVLDLSSY 137
Query: 126 LGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
G R P LF ++L TLKL+ +++P + L++L+L V++ ++S + LF+
Sbjct: 138 HGPRVRFPTSLFCFDTLETLKLDY-VYIYVPCPVSMKSLRTLHLLSVVYKGDESGHNLFA 196
Query: 186 GCPVLQELVI-YCWYWETVENVTVSLPTLRTLTIYYDPFCPKH 227
CP L+ LV+ ++++ V N + P+L+TL + DPF +
Sbjct: 197 SCPNLEHLVLRRGFFFDAVVNFIIDAPSLKTL-LLSDPFSARE 238
>AT3G59250.1 | Symbols: | F-box family protein |
chr3:21901726-21903284 REVERSE
Length = 425
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 144/311 (46%), Gaps = 54/311 (17%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LPE ++ +ILSFLP++D TS+LSKRW+Y + P FD
Sbjct: 7 DKISNLPEALICHILSFLPIEDSALTSVLSKRWRYLFAFRPNLVFD-------------- 52
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRL-GK 128
+S C+ R VI V WI N ++R V +LD+ + + G
Sbjct: 53 ---------------DSVCL---RPPCGHGVIPDYVTSWILNVLERGVLDLDLQVNVNGV 94
Query: 129 RFPLPHILFTSESLITLKLEMRCALHIPRSICF-PKLKSLYLSHAVF--EDEKSLNLLFS 185
R LP +F S+SL+ L++E I F PKLKSLYL H + + E L S
Sbjct: 95 R--LPSKVFVSKSLVRLRIESGNVRGIDVDDVFLPKLKSLYL-HTIMLGKGEDCFEKLTS 151
Query: 186 GCPVLQELVIYCWYWETVENVTVSLPTLRTLTIY----YDPFCPKHLLGCAVNISARNLI 241
GC VL+ELV+ Y V N +VS TL+ LT++ YD P +L NL+
Sbjct: 152 GCHVLEELVLNNVY-SNVWNRSVSSKTLKRLTLWCTESYDKN-PHSVL-----FDTPNLV 204
Query: 242 SLHCTSCLTINFSFCDLFSLVDAYIDVP--SLWPSEGQKVALC--AAKLLHGILRVKSLV 297
L + + + + SLVDA I + S + AL A L GI V+ L
Sbjct: 205 YLKYSDYVAAKYPKVNFSSLVDATIGLAMTSDQDANASYDALVGNATDFLMGICNVQILC 264
Query: 298 LTEHATEVVKF 308
L+ ++ V+ F
Sbjct: 265 LSANSLAVLTF 275
>AT1G66310.1 | Symbols: | F-box family protein |
chr1:24722971-24724475 REVERSE
Length = 442
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 22/201 (10%)
Query: 3 QHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFK 62
+ D +D + LPE +L +IL LP KD+V+TS+LS +W+ W+ P D D S DF
Sbjct: 12 KQSDDEVDWLRDLPESLLCHILLNLPTKDVVKTSVLSSKWRNLWRLVPGLDLD--SSDFT 69
Query: 63 NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLR----LRGSVIESD--VCRWISNAVKRK 116
N + + S H L ++KF+LR L G + + + RWI++ VKRK
Sbjct: 70 ENNTFVSFIDRFMSFHSDLY------LKKFKLRFFCNLNGDEVSENAHIARWINDVVKRK 123
Query: 117 VQELDISLRLGKRFPLPHILFTSESLITLKLEMRCALHIP--RSICFPKLKSLYLSHAVF 174
V LD++ +P IL+ SL++LKL C + +P P +K + L F
Sbjct: 124 VHNLDLT---WGAVEIPPILYLCNSLVSLKL---CGVTLPNLELTSLPCVKVIVLEWVKF 177
Query: 175 EDEKSLNLLFSGCPVLQELVI 195
++ +L +L SGC VL+ L +
Sbjct: 178 ANDLALEMLISGCLVLESLTL 198
>AT3G59180.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT3G59210.1); Has 614 Blast hits to 600
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 614; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr3:21880719-21882459 FORWARD
Length = 475
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 130/260 (50%), Gaps = 22/260 (8%)
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
R + + S + V+++++ + + +F L+ + + V WI N + R V +LD+++
Sbjct: 30 RRRWIHKSFKLFVNRLMALQGNAPLNRFSLKCKVRCDSACVDGWIINVLDRGVLDLDLNI 89
Query: 125 RLGKRFPLPHILFTSESLITLKLEMRCALHIP-RSICFPKLKSLYLSHAV-FEDEK-SLN 181
+ LP +F +++L+ LKL + I + PKLK+LYL V FED +
Sbjct: 90 SSESDYKLPSEVFLNKTLVRLKLGGKDEFIIDVEEVFLPKLKTLYLHGFVCFEDSGVACA 149
Query: 182 LLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD--PFCPKHLLGCAVNISARN 239
L SGCPVL+ELV+ W ++ +VS PTL+ +TI + + P+ +V+ N
Sbjct: 150 KLISGCPVLEELVMINLMWGLMDVCSVSNPTLKRVTICSEIIDYNPQ-----SVSFDTPN 204
Query: 240 LISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWP-----------SEGQKVALCAAKLLH 288
L+ L T + I + +L SLVDA + + L P S GQ + AA L
Sbjct: 205 LVYLEFTDVVAIKYPKVNLDSLVDARLGL-RLTPCQTTKARRSVKSVGQGMMGNAADFLM 263
Query: 289 GILRVKSLVLTEHATEVVKF 308
GI VK L L+ EV+ F
Sbjct: 264 GISNVKILYLSFDTLEVLNF 283
>AT3G59000.1 | Symbols: | F-box family protein |
chr3:21799757-21801536 FORWARD
Length = 491
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 116/224 (51%), Gaps = 16/224 (7%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAM----SDDFKNN 64
MD + LP+E+L +ILSFL K+ TSLLSKRW+Y P FD + ++ K
Sbjct: 1 MDRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPE 60
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
R + + S V +VL+ I+KF L+ R V V WISN + R V ELD+ +
Sbjct: 61 RDE-IRQSFMDFVDRVLALQAESPIKKFSLKCRIGVDSDRVDGWISNVLNRGVSELDLLI 119
Query: 125 RLG----KRFPLPHILFTSESLITLKLEMRCALHI---PRSICFPKLKSLYLSHAVFEDE 177
LG + L F S++L+ KLE+ C + I SI P LK+L L F +
Sbjct: 120 ILGMTMEDSYRLSPKGFASKTLV--KLEIGCGIDISWVAGSIFLPMLKTLVLDSVWFYVD 177
Query: 178 KSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
K LL + + + +++ + ++ +VT+S +L+TLTI D
Sbjct: 178 KFETLLLALPALEELVLVDVNWLDS--DVTISNASLKTLTIDSD 219
>AT3G58930.1 | Symbols: | F-box family protein |
chr3:21778381-21780014 REVERSE
Length = 482
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 34/328 (10%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD +S LP+ V +ILSFLP K I TS+LSK W WK P D D S+ +
Sbjct: 1 MDRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDD-SEFLHPEEGKA 59
Query: 69 MEMSLQRS----VHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
+ +++S V +VL+ + I++F L+ + V RWI N ++R V +LD+ +
Sbjct: 60 ERLEIRQSFVDFVDRVLALQDDSPIDRFSLKCITGIHPDHVNRWICNVLQRGVSDLDLFI 119
Query: 125 RLG------KRFPLPHILFTSESLITLKLEM-RCALHI--PRSICFPKLKSLYLSHAVFE 175
LP +F S++L+ LK+ RC P LKSLY+ +
Sbjct: 120 DFSYEDTQEDEDMLPQEMFVSKTLVKLKIRNDRCVDWWCGKGGTSLPMLKSLYIDSDLIL 179
Query: 176 DEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNI 235
K + S PVL+EL + W+ + TVS +LR L+I C ++ +++
Sbjct: 180 WGK-MKRFLSSFPVLEELRMASMEWKE-SHETVSSASLRKLSI-LGTGCEDYVNPKSISF 236
Query: 236 SARNLISLHCTSCLTINFSFCDLFSLVDAYIDV--------------PSLWPSEGQKVAL 281
+L+ L+ + + ++ ++ L++A I++ L + V L
Sbjct: 237 DTPSLLYLNYSDLVAEDYPLVNMGKLLEARINLIVKDDQIKRVREPNNDLLQDDAGNVVL 296
Query: 282 ---CAAKLLHGILRVKSLVLTEHATEVV 306
KL++GI ++ L LT EV+
Sbjct: 297 QFGNVVKLMNGIQNIQILYLTADTLEVL 324
>AT3G58980.1 | Symbols: | F-box family protein |
chr3:21794445-21797006 REVERSE
Length = 594
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 27/273 (9%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS LP E++ +I+SFL K+ S+LSKRW+ + + FD D KN
Sbjct: 1 MDRISNLPNEIICHIVSFLSAKEAAFASILSKRWRNLFTIVIKLQFD---DSVKN----- 52
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIES---DVCRWISNAVKRKVQELDISLR 125
E SL+ V VL+ S + L R + D R I +KR + +L + +
Sbjct: 53 -EGSLKDFVDGVLALPTSSRVRSCSLECRREFDPTHYDDFNRCICALLKRGILDLKLDIC 111
Query: 126 LGKRFPLPHILFTSESLITLKLEMRCALH----IPRSICFPKLKSLYLSHAVFEDEK--S 179
G+R+ LP +FT ++L+ L+L +P P L++L L++ F+D + +
Sbjct: 112 AGRRYSLPLEVFTCKTLVKLELGSDFGGFVVDLVPEDAFLPALETLLLNYIRFKDLRRCA 171
Query: 180 LNLLFSGCPVLQELVIYCWYWETVE-NVTVSLPTLRTLTIYYDPFCPKHLLGCA---VNI 235
L S C VL+ELVI+ WE + + +S PTL LTI + L C +N+
Sbjct: 172 FEKLLSACLVLKELVIHNMEWERWKWSGNISSPTLERLTISH-----VDLYECEFTRINL 226
Query: 236 SARNLISLHCTSCLTINFSFCDLFSLVDAYIDV 268
NL L + + ++ +L SLV+ +D+
Sbjct: 227 DTPNLTYLELSDAVPDDYPIVNLDSLVEVKLDL 259
>AT1G51370.2 | Symbols: | F-box family protein |
chr1:19045615-19046748 FORWARD
Length = 346
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 117/255 (45%), Gaps = 17/255 (6%)
Query: 5 VTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNN 64
V+ D IS LPE ++ IL L KD VRTS LS +W+Y W+S P D D + N
Sbjct: 14 VSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTN- 72
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
++ V I K RL L + D+ WI A R++Q LD+
Sbjct: 73 -------TIVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDLMSWIDAATTRRIQHLDVHC 125
Query: 125 RLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLF 184
+ PL ++T +L+ L+L L P + P LK ++ + + +E +L L
Sbjct: 126 FHDNKIPLS--IYTCTTLVHLRLRW-AVLTNPEFVSLPCLKIMHFENVSYPNETTLQKLI 182
Query: 185 SGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI--YYDPFCPKHLLGC--AVNISARN- 239
SG PVL+EL+++ + + + TL+ L I + D LL C A S +N
Sbjct: 183 SGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDINEFIDVVIYAPLLQCLRAKMYSTKNF 242
Query: 240 -LISLHCTSCLTINF 253
+IS + L I+F
Sbjct: 243 QIISSGFPAKLDIDF 257
>AT4G00320.1 | Symbols: | F-box family protein | chr4:139939-141643
FORWARD
Length = 507
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 150/327 (45%), Gaps = 41/327 (12%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFK------- 62
D IS LP+ ++ +ILSFLP K T++L+KRWK P DFD + F+
Sbjct: 13 DGISGLPDAMICHILSFLPTKVAASTTVLAKRWKPLLAFMPNLDFD---ESFRFDPRMTC 69
Query: 63 NNRSQGMEMSLQRSVHQVLS--CDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQEL 120
R +G E S V VL+ + + + KF ++ G V ++ V WI +KR V ++
Sbjct: 70 EERRKGSE-SFMLVVDSVLALQAEANATLNKFYVKCEG-VEQNSVLEWIPKVLKRGVLDI 127
Query: 121 DISLRLGKRF-------PLPHILFTSESLITLKLEMR--CALHIPRSICFPKLKSLYLSH 171
D+ + + F PLP +F S++L+ LK++ + +++ + P LK+L+L +
Sbjct: 128 DLQIPSSRGFGSNSTFYPLPSEIFVSKTLVRLKIQFQDGANVNVEGDVSLPMLKTLHLDY 187
Query: 172 AVFEDEKSLNLLFSGCPVLQELVIYCWYWETVEN-----VTVSLPTLRTLT-------IY 219
V D + L L SGC L+EL++ W+ V+VS+ TL+ L +
Sbjct: 188 -VKMDTRMLQKLLSGCHTLEELLLMNLIWKESSEPEPCFVSVSVRTLKILKFSRFENFMK 246
Query: 220 YDPFCPKHLLGCAVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKV 279
F P LL + NL+ L + + SLV A I + + +
Sbjct: 247 AKDFKPIVLL----SFDIPNLVYLEYLDTIADKYEQVRFDSLVKASIGLCKT-SKQIEND 301
Query: 280 ALCAAKLLHGILRVKSLVLTEHATEVV 306
KL GI V L LTE +V+
Sbjct: 302 NNNVTKLFMGICNVTILYLTEDTLKVL 328
>AT1G32375.1 | Symbols: | F-box family protein |
chr1:11679230-11680679 FORWARD
Length = 422
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD +S LPE +L ILS L KD+V T +LSKRW++ W P+ +D + Q
Sbjct: 1 MDKLSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLIYD--------DSYQA 52
Query: 69 MEM-SLQRSVHQVLSCDNSDCIEKFRLRL-RGSVIESDVCRWISNAVKRKVQEL----DI 122
+E S R V + + ++ ++ +L + S D+ WI A K ++EL D
Sbjct: 53 IEYGSFSRFVDRSFTLHDAQVLDTLHFKLGKTSCGTGDIRVWIKTAEKSCLRELIIEIDK 112
Query: 123 SLRLGKRFPLPHILFTS-ESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLN 181
S LP L+T L+TLKL + S FP LK+L L F ++ +
Sbjct: 113 SNSDNSSVVLPRSLYTCCRMLVTLKLNNAVLVDATSSFSFPSLKTLSLVSMKFPGDELIK 172
Query: 182 LLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIY 219
+L S CPVL++LV+ ++ V TV + +L+ L ++
Sbjct: 173 MLLSNCPVLEDLVVKRCPYDNVTTFTVRVSSLKCLVLH 210
>AT1G51370.1 | Symbols: | F-box family protein |
chr1:19045615-19047141 FORWARD
Length = 435
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 117/255 (45%), Gaps = 17/255 (6%)
Query: 5 VTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNN 64
V+ D IS LPE ++ IL L KD VRTS LS +W+Y W+S P D D + N
Sbjct: 14 VSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTN- 72
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
++ V I K RL L + D+ WI A R++Q LD+
Sbjct: 73 -------TIVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDLMSWIDAATTRRIQHLDVHC 125
Query: 125 RLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLF 184
+ PL ++T +L+ L+L L P + P LK ++ + + +E +L L
Sbjct: 126 FHDNKIPLS--IYTCTTLVHLRLRW-AVLTNPEFVSLPCLKIMHFENVSYPNETTLQKLI 182
Query: 185 SGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI--YYDPFCPKHLLGC--AVNISARN- 239
SG PVL+EL+++ + + + TL+ L I + D LL C A S +N
Sbjct: 183 SGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDINEFIDVVIYAPLLQCLRAKMYSTKNF 242
Query: 240 -LISLHCTSCLTINF 253
+IS + L I+F
Sbjct: 243 QIISSGFPAKLDIDF 257
>AT1G69630.1 | Symbols: | F-box family protein |
chr1:26191640-26193174 REVERSE
Length = 451
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 145/321 (45%), Gaps = 28/321 (8%)
Query: 1 MRQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
+R +D +D IS LP+ +L +L LP KD+V+TS+LS+RW+ WK P D D + D
Sbjct: 9 VRAKGSDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLD--NTD 66
Query: 61 FKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLR-GSVIESD---VCRWISNAVKRK 116
F+ + V L ++ ++KF L+ + D + RWI+ V RK
Sbjct: 67 FQEFN------TFLSFVDSFLDFNSESFLQKFILKYDCDDEYDPDIFLIGRWINTIVTRK 120
Query: 117 VQELDI-SLRLGK-RFPLPHILFTSESLITLKLEMRCALHI--PRSICFPKLKSLYLSHA 172
VQ +D+ G LP ++T ESL++LKL C L + P + P LK + L
Sbjct: 121 VQHIDVLDDSYGSWEVQLPSSIYTCESLVSLKL---CGLTLASPEFVSLPSLKVMDLIIT 177
Query: 173 VFEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCA 232
F D+ L L + CPVL+ L I + + +E + V +L T D +
Sbjct: 178 KFADDMGLETLITKCPVLESLTIERSFCDEIEVLRVRSQSLLRFTHVADS-DEGVVEDLV 236
Query: 233 VNISARNLISLHCTSCLTINFSFCDLFSLVDAYID-------VPSLWPSEGQKVALCAAK 285
V+I A L L + +F LV A ID V P + K +
Sbjct: 237 VSIDAPKLEYLRLSDHRVASFILNKPGKLVKADIDIVFNLSSVNKFNPDDLPKRTMIRNF 296
Query: 286 LLHGILRVKSLVLTEHATEVV 306
LL GI +K +++ EV+
Sbjct: 297 LL-GISTIKDMIIFSSTLEVI 316
>AT1G66300.1 | Symbols: | F-box family protein |
chr1:24716497-24718050 REVERSE
Length = 456
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 18/193 (9%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
+D + LPE ++ ++L L KD+++ +LS +W+Y W+ P D D SD + N
Sbjct: 28 VDWVRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVPGLDLDC-SDFTEYN---- 82
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVI------ESDVCRWISNAVKRKVQELDI 122
+ V + LS + + KF+L ++ + + RWI++ VKRKVQ LD+
Sbjct: 83 ---TFVSFVDRFLSTNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQHLDL 139
Query: 123 SLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNL 182
+P I++ +SL++LKL L IP +C P +K + L F ++ +L +
Sbjct: 140 EW---GALEIPPIVYVCKSLVSLKL-CGVILPIPEFVCLPSVKVIVLDWVKFANDLALEM 195
Query: 183 LFSGCPVLQELVI 195
L SGC VL+ L +
Sbjct: 196 LISGCLVLKSLTL 208
>AT5G56820.1 | Symbols: | F-box family protein |
chr5:22976334-22977838 FORWARD
Length = 435
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 24/266 (9%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKN----NR 65
D IS LP+++L ILSF+ D + TSLLSKRWK+ WK P D D D +N
Sbjct: 15 DRISYLPDDLLLRILSFIHTSDAISTSLLSKRWKFVWKMMPTLDLD--EDSCRNIGTLRF 72
Query: 66 SQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLR 125
+G M L+ VL+ L L+ D+ R +SN +K + E+ I+
Sbjct: 73 DEGCCMFLKSHEAPVLTS----------LNLKLMTPSHDIDRLLSN-IKPILHEITITSY 121
Query: 126 LGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
P L ++L+ +KL+ + + + +CF LKSL+L+ + +S L S
Sbjct: 122 RYSTIRFPRNLNVCQTLVVMKLQDKVLVDVSFPVCFRSLKSLHLTRVKYSCRESFTTLLS 181
Query: 186 GCPVLQELVIYCW--YWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNLISL 243
CPVL++L ++ +++ + + T+ +P+L+ L+I + + IS +L L
Sbjct: 182 ACPVLEDLDLFIGRVHYDCLNSFTIWVPSLQRLSICDESY---RFRSTTFEISVPSLKYL 238
Query: 244 HCTSCLTINFSFC-DLFSLVDAYIDV 268
+C F F D+ +LV+A+++
Sbjct: 239 K-IACQDSCFKFVEDMPNLVEAHVEA 263
>AT4G22280.1 | Symbols: | F-box family protein |
chr4:11776054-11777517 REVERSE
Length = 415
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 16/260 (6%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD I+ L ++++ +ILS L K+ TS+LS RW+Y + P D ++ G
Sbjct: 1 MDRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLD--------DQEVG 52
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
S V +VL + I + ++ R S+ V RW+ + ++ V LDI +
Sbjct: 53 GGDSFIDFVDRVLVVTGNFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDIISED 112
Query: 129 RFP-LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVF--EDEKSLNLLFS 185
+P +FT ++L+ LKL +P + P LK+L+LS F D L L S
Sbjct: 113 DIGFVPLEIFTCKTLVELKLARGFYAMVPDYVSLPSLKTLFLSSIWFCNRDCCPLGRLLS 172
Query: 186 GCPVLQELVIYCWYWETVENV-TVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNLISLH 244
CPVL+EL I W+ +E TVS TL+ LTI H + I +L L
Sbjct: 173 ACPVLEELTIIGGCWQHIEFCRTVSSSTLKKLTIT----SSFHYEYWGITIDTPSLAYLE 228
Query: 245 CTSCLTINFSFCDLFSLVDA 264
+ + +F F +L SLV+A
Sbjct: 229 YSDLVPRHFPFVNLESLVEA 248
>AT4G22280.2 | Symbols: | F-box family protein |
chr4:11776368-11777517 REVERSE
Length = 332
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 16/260 (6%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD I+ L ++++ +ILS L K+ TS+LS RW+Y + P D ++ G
Sbjct: 1 MDRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLD--------DQEVG 52
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
S V +VL + I + ++ R S+ V RW+ + ++ V LDI +
Sbjct: 53 GGDSFIDFVDRVLVVTGNFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDIISED 112
Query: 129 RFP-LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVF--EDEKSLNLLFS 185
+P +FT ++L+ LKL +P + P LK+L+LS F D L L S
Sbjct: 113 DIGFVPLEIFTCKTLVELKLARGFYAMVPDYVSLPSLKTLFLSSIWFCNRDCCPLGRLLS 172
Query: 186 GCPVLQELVIYCWYWETVENV-TVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNLISLH 244
CPVL+EL I W+ +E TVS TL+ LTI H + I +L L
Sbjct: 173 ACPVLEELTIIGGCWQHIEFCRTVSSSTLKKLTIT----SSFHYEYWGITIDTPSLAYLE 228
Query: 245 CTSCLTINFSFCDLFSLVDA 264
+ + +F F +L SLV+A
Sbjct: 229 YSDLVPRHFPFVNLESLVEA 248
>AT3G58920.1 | Symbols: | F-box family protein |
chr3:21776293-21777988 FORWARD
Length = 470
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 113/234 (48%), Gaps = 28/234 (11%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS LP E++ +I+SFL K+ S+LSKRW+ + + +FD D KN QG
Sbjct: 1 MDRISNLPNEIICHIVSFLSAKEAAFASVLSKRWQNLFTIVQKLEFD---DSVKN---QG 54
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRL---------RGSVIESDVC-RWISNAVKRKVQ 118
SL V+ VL+ + I KF LR G VI V R + N +KR V
Sbjct: 55 ---SLMDFVNGVLALPVTTRISKFSLRFDSFLKRKLETGLVIGPHVVNRCLCNVLKRGVL 111
Query: 119 ELDISLRLGKRFPLPHILFTSESLITLKL------EMRCALHIPRSICFPKLKSLYLSHA 172
+L + + + LP +FT ++++ LKL E IP + P L+SL+L
Sbjct: 112 DLKLEIYGEDGYLLPSEVFTCKTIVDLKLTSCIFAESYVIDVIPENAFLPGLESLFLKSI 171
Query: 173 VFEDEK--SLNLLFSGCPVLQELVIYCWYWETVE-NVTVSLPTLRTLTIYYDPF 223
F D + + L S CPVL+ L IY WE + + TVS TL L I F
Sbjct: 172 WFSDLRGCAFQTLLSACPVLKTLTIYDVQWEKWKWSRTVSSATLERLIIQRTEF 225
>AT5G22610.1 | Symbols: | F-box family protein |
chr5:7515217-7516916 FORWARD
Length = 472
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 142/325 (43%), Gaps = 77/325 (23%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMS----DDFKNNR 65
D+IS LPE +L ILS+LP KDIVRTS+LSKRWK W P D D+ D F +
Sbjct: 18 DLISKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWLLIPGLDLDSSEFPHYDTFVDFM 77
Query: 66 SQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD---VCRWISNAVKRKVQELDI 122
++ + S + + C+ K +L ++ + E+D V W + K+Q LD+
Sbjct: 78 NEFL----------FFSREENPCLHKLKLSIQKN--ENDPSCVTLWTDCVARGKLQHLDV 125
Query: 123 SLRLGKRF-------PLPHILFTSESLITLKLEMRCALHIPRSI-CFPKLKSLYLSHAVF 174
G R +P L+ ++L+ L+L + +S+ P LKS+ L V+
Sbjct: 126 --EFGGRVMEREFWEMMPLSLYICKTLLHLRLYRVLLGNFDQSVDSLPSLKSMCLEENVY 183
Query: 175 EDEKSLNLLFSGCPVLQELVIYCWYWETVENV--------TVSLPTLRTLTIYYDPFCPK 226
+E SL L S C VL++L I + +NV + P L+ LT D K
Sbjct: 184 SNEASLESLISSCRVLEDLTIV----KIDDNVRDRGNSGLVIDAPRLKYLTFNNDQSKSK 239
Query: 227 HLLGCAVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALC---- 282
+ +L SLV I L P + +V C
Sbjct: 240 ---------------------------TISNLGSLVKVTI----LGPIKISRVVGCTEQQ 268
Query: 283 -AAKLLHGILRVKSLVLTEHATEVV 306
A K L GI RV+ L+++E EV+
Sbjct: 269 MAHKFLTGISRVRYLIVSEDMMEVI 293
>AT5G22660.1 | Symbols: | F-box family protein |
chr5:7536906-7537853 REVERSE
Length = 315
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 19/313 (6%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
G D IS LP+ +L ILS LP ++ V TS+LS RWK W S P + +
Sbjct: 11 GEDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVL--------DIDIDAF 62
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIES-DVCRWISNAVKRKVQELDISLRL 126
+ + L C+ K ++ + ++ + WI +AVKR++Q L++ R+
Sbjct: 63 DDATTFISFATRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQHLEVDSRI 122
Query: 127 GKRF-PLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
LP ++ SESL++L+L + LH + P LK ++L ++ +++ S
Sbjct: 123 DHMIDTLPLTVYLSESLVSLRLHL-VMLHRFVFVSLPNLKVMHLEENIYSYAETMEKFIS 181
Query: 186 GCPVLQELVIYCWYWETVENV-TVSLPTLRTLTIYYDP---FCPKHLLGCAVNISARNLI 241
CPVL++L + E E V VS +L +L + D + V I A L+
Sbjct: 182 SCPVLEDLTVVRNVDEATEKVLRVSSQSLNSLKLVIDSSKCWYNDDSDDWKVVIDAPQLV 241
Query: 242 SLHCTSCLTINFSFCDLFSLVDAYI----DVPSLWPSEGQKVALCAAKLLHGILRVKSLV 297
L +++F +L S A I +V +W E K L G+ ++ +
Sbjct: 242 YLSLKDDQSVSFVINNLCSSAKADIKVSFNVSDIWDLEESFERSNVGKFLTGLSSLRDMT 301
Query: 298 LTEHATEVVKFPN 310
++ +V N
Sbjct: 302 ISGTTLKVYMHTN 314
>AT5G22660.2 | Symbols: | F-box family protein |
chr5:7536328-7537853 REVERSE
Length = 450
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 138/309 (44%), Gaps = 19/309 (6%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
G D IS LP+ +L ILS LP ++ V TS+LS RWK W S P + +
Sbjct: 11 GEDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVL--------DIDIDAF 62
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIES-DVCRWISNAVKRKVQELDISLRL 126
+ + L C+ K ++ + ++ + WI +AVKR++Q L++ R+
Sbjct: 63 DDATTFISFATRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQHLEVDSRI 122
Query: 127 GKRF-PLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
LP ++ SESL++L+L + LH + P LK ++L ++ +++ S
Sbjct: 123 DHMIDTLPLTVYLSESLVSLRLHL-VMLHRFVFVSLPNLKVMHLEENIYSYAETMEKFIS 181
Query: 186 GCPVLQELVIYCWYWETVENV-TVSLPTLRTLTIYYDP---FCPKHLLGCAVNISARNLI 241
CPVL++L + E E V VS +L +L + D + V I A L+
Sbjct: 182 SCPVLEDLTVVRNVDEATEKVLRVSSQSLNSLKLVIDSSKCWYNDDSDDWKVVIDAPQLV 241
Query: 242 SLHCTSCLTINFSFCDLFSLVDAYI----DVPSLWPSEGQKVALCAAKLLHGILRVKSLV 297
L +++F +L S A I +V +W E K L G+ ++ +
Sbjct: 242 YLSLKDDQSVSFVINNLCSSAKADIKVSFNVSDIWDLEESFERSNVGKFLTGLSSLRDMT 301
Query: 298 LTEHATEVV 306
++ +++
Sbjct: 302 ISGTTLKII 310
>AT2G29910.2 | Symbols: | F-box family protein |
chr2:12751823-12752830 REVERSE
Length = 335
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 21/268 (7%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D+IS LP+E+L +LS LP K T++LSKRW + A+ D N + G
Sbjct: 5 DLISSLPDEILGKVLSLLPTKRAASTAVLSKRWN---------NLPALVDKLDINDAIGG 55
Query: 70 EMSLQRSVHQVLS-CDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
+ + L+ NS I++ L ES V WI + ++R L + L
Sbjct: 56 PGGFPEFIDKTLALLTNSTTIKRTSLNNEFQYGESQVNTWIRSFLERGC--LQLYLNAQS 113
Query: 129 RFPLPHILFTSESLITLKLEMRC---ALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
+ + FTS +L+ L + L P + FPKLK+L L F D L S
Sbjct: 114 LYTIDTEFFTSNTLVELTITGGFSPDGLLPPGGVFFPKLKTLSLVLMTFVDSDMYELFIS 173
Query: 186 GCPVLQELVIYCWYWET--VENVTVSLPTLRTLTI-YYDPFCPKHLLGCAVNISARNLIS 242
GCP+L+E ++ E V N VS P+++ LTI ++ P + GC NL+
Sbjct: 174 GCPLLEEFLLRNDEIEIPPVWNALVSSPSIKRLTIVHHFPNYREAHDGCW--FRTPNLVY 231
Query: 243 LHCTSCLTINFSFCDLFSLVDAYIDVPS 270
L +S + ++ DL SLV+A +D+ S
Sbjct: 232 LDYSSYVP-DWYEVDLGSLVEARLDLRS 258
>AT2G29910.1 | Symbols: | F-box family protein |
chr2:12751686-12752830 REVERSE
Length = 352
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 21/268 (7%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D+IS LP+E+L +LS LP K T++LSKRW + A+ D N + G
Sbjct: 5 DLISSLPDEILGKVLSLLPTKRAASTAVLSKRWN---------NLPALVDKLDINDAIGG 55
Query: 70 EMSLQRSVHQVLS-CDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
+ + L+ NS I++ L ES V WI + ++R L + L
Sbjct: 56 PGGFPEFIDKTLALLTNSTTIKRTSLNNEFQYGESQVNTWIRSFLERGC--LQLYLNAQS 113
Query: 129 RFPLPHILFTSESLITLKLEMRC---ALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
+ + FTS +L+ L + L P + FPKLK+L L F D L S
Sbjct: 114 LYTIDTEFFTSNTLVELTITGGFSPDGLLPPGGVFFPKLKTLSLVLMTFVDSDMYELFIS 173
Query: 186 GCPVLQELVIYCWYWET--VENVTVSLPTLRTLTI-YYDPFCPKHLLGCAVNISARNLIS 242
GCP+L+E ++ E V N VS P+++ LTI ++ P + GC NL+
Sbjct: 174 GCPLLEEFLLRNDEIEIPPVWNALVSSPSIKRLTIVHHFPNYREAHDGCW--FRTPNLVY 231
Query: 243 LHCTSCLTINFSFCDLFSLVDAYIDVPS 270
L +S + ++ DL SLV+A +D+ S
Sbjct: 232 LDYSSYVP-DWYEVDLGSLVEARLDLRS 258
>AT5G02700.1 | Symbols: | F-box family protein | chr5:609381-611679
REVERSE
Length = 456
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 22/198 (11%)
Query: 3 QHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFK 62
Q + DG D I+ +P+++LH+ILSF+P +RTS+LS+RW++ W P D
Sbjct: 20 QRIIDGADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDITLK----- 74
Query: 63 NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLR-GSVIESDVCRWISNAVKRKVQELD 121
+++Q L+ + I F+L + S V WI A+ R VQ L
Sbjct: 75 -----------HGAMNQTLTSYTAPIITSFKLVMDLNSNTVPQVDSWIEFALSRNVQNLS 123
Query: 122 ISLR---LGKRFPLPHILFTSESLITLKLEMRCALHIPR-SICFPKLKSLYLSHAVFEDE 177
+ +R K + P I + S SL L + + IP ++ + L++L L DE
Sbjct: 124 VFVRDFTYSKTYRFPDIFYLSSSLKLLDVTLDFFDMIPTCTVSWKSLRNLTLRFCQIPDE 183
Query: 178 KSLNLLFSGCPVLQELVI 195
N+L SGCP+L+ L +
Sbjct: 184 SIHNIL-SGCPILESLTL 200
>AT5G56560.1 | Symbols: | F-box family protein |
chr5:22899724-22901985 FORWARD
Length = 607
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 102/207 (49%), Gaps = 8/207 (3%)
Query: 12 ISVLPEEVLHYILSFLPM-KDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGME 70
+S LP+E+L ILS LPM K + T L+S+RWK WK P FD DD +S
Sbjct: 7 LSDLPDELLLKILSALPMFKVTLATRLISRRWKGPWKLVPDVTFD---DDDIPFKSFETF 63
Query: 71 MSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGKRF 130
MS V+ +++ +++ L+L SD+ W+ AV R V+EL I L GK
Sbjct: 64 MSF---VYGSFLSNDAQILDRLHLKLNQKYSASDINFWVQVAVNRSVRELRIDL-FGKTL 119
Query: 131 PLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVL 190
LP L + +L L L C +P P LK+L+L F + + + CPVL
Sbjct: 120 ELPCCLCSCITLKELTLHDLCIKVVPAWFRLPSLKTLHLLSVKFSSDGFVASILRICPVL 179
Query: 191 QELVIYCWYWETVENVTVSLPTLRTLT 217
+ LV+ V+ + +P LR+L+
Sbjct: 180 ERLVVDGTKGVNVKIPNMDVPNLRSLS 206
>AT3G28410.1 | Symbols: | F-box family protein |
chr3:10640152-10642071 REVERSE
Length = 465
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 143/317 (45%), Gaps = 38/317 (11%)
Query: 3 QHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFK 62
Q + DG D I+ +P+++LH+ILSF+P +RTS+LS+RW++ W P D +
Sbjct: 21 QRIIDGADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDIKLKHGE-- 78
Query: 63 NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRL---RGSVIESDVCRWISNAVKRKVQE 119
+Q L+ + I F+L + +V + D WI A+ R VQ
Sbjct: 79 --------------TNQTLTSYTAPIITSFKLVMDLNDNTVPQVD--SWIEFALSRNVQN 122
Query: 120 LDISLR---LGKRFPLPHILFTSESLITLKLEMRCALHIPR-SICFPKLKSLYLSHAVFE 175
L + +R K + P I + S SL L + + IP ++ + L++L L
Sbjct: 123 LSVFVRDFTYTKTYRFPDIFYISSSLKQLDVTLDFFDMIPTCAVSWKSLRNLTLRFCQIP 182
Query: 176 DEKSLNLLFSGCPVLQELVI-YCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVN 234
DE N+L SGCP+L+ L + C E ++ P LR L I ++ +
Sbjct: 183 DESMHNIL-SGCPILESLTLDTCRLLERLD--LSKSPNLRRLDINR-----QYRRTGPIA 234
Query: 235 ISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPS---LWPSEGQKVALCAAKLLHGIL 291
I A ++ L T T + + D+ SL +A +++ S L P + A ++L
Sbjct: 235 IVAPHIYYLRLTYSSTPS-TIVDVSSLSEANLNIISDRLLSPLTADRYQTMALEMLSKFH 293
Query: 292 RVKSLVLTEHATEVVKF 308
VK L + E +++
Sbjct: 294 NVKRLTVGETILQILSL 310
>AT3G58960.1 | Symbols: | F-box family protein |
chr3:21787146-21788807 REVERSE
Length = 475
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 116/231 (50%), Gaps = 27/231 (11%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS L +++ I+SFL KD S+LSKRW+ + P +FD ++ QG
Sbjct: 1 MDRISSLSNDIISNIVSFLSAKDAAVASVLSKRWQNIYTIVPNLEFDNTLEN------QG 54
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVI---ESDVCRWISNAVKRKV--QELDIS 123
SL ++ +L+ S I+ ++ RG ++D+ R++ N +KR V +LDI
Sbjct: 55 ---SLTDFLNGLLALPASTRIKNVSIKRRGRDGPNRDADLNRFLCNVLKRGVLKLKLDIW 111
Query: 124 LRLGKRFPLPHILFTSESLITLKLEMRCALH-IPRSICFPKLKSLYLSHAVFEDEK--SL 180
+ L R+ LP +FT ++L+ L+L + +P + P LK+L + F D+ +
Sbjct: 112 VTLDGRYSLPVEVFTCKTLVELELGSILQIDLVPENALLPALKTLIIDAVQFSDQSGCAF 171
Query: 181 NLLFSGCPVLQELVIYCWYWETVE-NVTVSLPTLRTLTI---------YYD 221
L S CPVL EL + WE + + VS PTL LT+ YYD
Sbjct: 172 QKLLSSCPVLVELRMLNVQWEHWQWSRRVSSPTLEKLTMNHRYHFGNTYYD 222
>AT1G66320.1 | Symbols: | F-box family protein |
chr1:24727041-24728614 REVERSE
Length = 457
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 139/308 (45%), Gaps = 32/308 (10%)
Query: 15 LPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEMSLQ 74
LPE +L +L +P KD+V+TS++S W++ W+ P D D DF +L
Sbjct: 35 LPESLLFQVLLNIPTKDLVKTSVVSPEWRHLWRCVPGLDLDEA--DFTQFD------TLV 86
Query: 75 RSVHQVLSCDNSDCIEKFRLRL------RGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
+ LS + + KF+LR+ + + RWIS V++ VQ +D++
Sbjct: 87 SFIDSFLSINRESSLNKFKLRIYCNHDRDKETNNAHMARWISAIVEQNVQHVDLT---WL 143
Query: 129 RFPLPHILFTSESLITLKLEMRCALHIP--RSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
+P IL+ ESL+TL+L C + + + P +K L L +F +E +L L SG
Sbjct: 144 PVEVPPILYLCESLVTLRL---CGVVLANLEFMYLPLVKVLALEWVIFANELALEKLISG 200
Query: 187 CPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPK-HLLGCAVNISARNLISLHC 245
C VL+ L + V + V +L + YY P H AV I A L L
Sbjct: 201 CLVLESLRFCKCSLDNVNVLRVRSQSLLSFN-YYGPSSRDLHFKDLAVTIDAPKLEILKL 259
Query: 246 TSCLTINFSFCDLFSLVDAYIDVP-------SLWPSEGQKVALCAAKLLHGILRVKSLVL 298
+ +T +F L SLV+A I V P++ K + L I RVK++ +
Sbjct: 260 SHQVTSSFIIKKLSSLVEANIKVEFNFCVGKKFNPNDLSKRKMI-LHFLVAISRVKNMTI 318
Query: 299 TEHATEVV 306
E++
Sbjct: 319 AASTLEII 326
>AT1G78840.1 | Symbols: | F-box family protein |
chr1:29639290-29640817 REVERSE
Length = 439
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 116/245 (47%), Gaps = 22/245 (8%)
Query: 7 DGMDIIS-VLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNR 65
+ D+IS +LP+ VLH IL L KD V+TS+LS RW+Y W+ P D + N R
Sbjct: 2 ENKDLISQLLPDHVLHEILLKLATKDSVKTSILSTRWRYIWQRVPGLDLNQ-----TNFR 56
Query: 66 SQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD---VCRWISNAVKRKVQELDI 122
+G L+ V++ L D I + +L G E++ +W+ + V R VQ L
Sbjct: 57 YKG----LKGFVNRFLDLDKKSLIYQLKLEFDGRKYETEGSLFNKWVDSVVTRGVQHL-- 110
Query: 123 SLRLGKRFP--LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSL 180
+ P LP + E+L+ LKL + + S+ P+L++++L F E +L
Sbjct: 111 ---VNNYCPIKLPGSISMCETLVHLKL-VEVGIDSFDSVSLPRLETMHLLSVWFSSEAAL 166
Query: 181 NLLFSGCPVLQELVI-YCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARN 239
L S PVLQ L I W E + + +L +LR D K L + I A
Sbjct: 167 ERLISSSPVLQVLYIEKVWNVEVIRVRSQTLYSLRMRIWKRDLDWNKDLTKIGLVIDAPR 226
Query: 240 LISLH 244
L SL+
Sbjct: 227 LKSLN 231
>AT5G22720.1 | Symbols: | F-box family protein |
chr5:7549565-7551174 REVERSE
Length = 422
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRS--Q 67
D+IS LP+ ++ IL +L K V TS+LSKRW+ W S P +S+DF + +
Sbjct: 23 DLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLSTP--GLVLISNDFTDYNAFVS 80
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD-VCRWISNAVKRKVQELDISL-- 124
++ L S Q L C+ K +L +R + D V RWI K++ LD+ +
Sbjct: 81 FVDKFLGFSREQKL------CLHKLKLSIRKGENDQDCVTRWIDFVATPKLKHLDVEIGP 134
Query: 125 -RLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
R +P L++ ESL+ L+L C L S+ P LK++ L ++ +E L L
Sbjct: 135 TRCECFEVIPLSLYSCESLLYLRLNHVC-LGKFESVSLPCLKTMSLEQNIYANEADLESL 193
Query: 184 FSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
S CPVL++L ++ V + V TL +L I
Sbjct: 194 ISTCPVLEDLSFVSGAYDKVNVLRVQSQTLTSLNI 228
>AT3G44060.1 | Symbols: | F-box family protein |
chr3:15824938-15826391 REVERSE
Length = 427
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 15 LPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEMSLQ 74
LP+++L IL LP K+ V TS+LSKRW+ + + DF D + R + + S
Sbjct: 4 LPDDLLVQILYLLPTKEAVSTSVLSKRWRTLFTRSDNLDF----HDPISGRPEDILKSFN 59
Query: 75 RSVHQVLSCDNSDCIEKFRLRLRGSVIESDVC-RWISNAVKRKVQELDISLRLGK---RF 130
V L+ I+KF L + E V RWI NA++ V EL + L F
Sbjct: 60 DFVDSSLAFQGGKHIKKFSLHTKIKTFEYHVLDRWICNALEHGVSELHLHLMHESWPWLF 119
Query: 131 PLPHILFTSESLITLKLEMR--CALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCP 188
+P +F S +L+ L L R C P P LK L L +F D++ N+ + CP
Sbjct: 120 SIPSKVFNSSTLVKLSLGSRLYCP-SFPPDTSLPALKVLLLDSILFRDDQLSNVFLAACP 178
Query: 189 VLQELVIYCWY 199
L++L I+ Y
Sbjct: 179 ALEDLTIHHTY 189
>AT5G22700.1 | Symbols: | F-box family protein |
chr5:7545653-7547307 REVERSE
Length = 437
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNP----RYDFDAMSDDFKNNR 65
D IS LP+E+L ILS LP K+ V TS+LS RW+ W S P D + F +
Sbjct: 6 DRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDIDIDAFDDATTFVSFA 65
Query: 66 SQGMEMSLQRSVHQVLSCDNSDCIEKFRLRL-RGSVIESDVCRWISNAVKRKVQELDISL 124
S+ +E S C+ KF+L + R V + WI +AV R++Q L++
Sbjct: 66 SRFLEFS------------KDSCLHKFKLSVERDDVDMCTIMPWIQDAVNRRIQHLEVDC 113
Query: 125 RLGKRFPLPHI-LFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
R F ++ L+ SE+L++L+L LH + P LK ++L ++ ++L
Sbjct: 114 RFSFHFEAVYLTLYLSETLVSLRLHF-VTLHRYEFVSLPNLKVMHLEENIYYCLETLENF 172
Query: 184 FSGCPVLQELVI 195
S CPVL++L +
Sbjct: 173 ISSCPVLEDLTV 184
>AT4G13985.1 | Symbols: FBD1 | FBD1 (FBD-ASSOCIATED F-BOX PROTEIN) |
chr4:8080118-8081669 REVERSE
Length = 459
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 7 DGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRS 66
D +D + LP+ +L IL LP KD+V+ S+LS+RW+ W+ P D + +
Sbjct: 16 DRVDRLRNLPDCLLFKILLNLPTKDVVKLSVLSRRWRNVWRYVPGLDLECGDFMVREYYD 75
Query: 67 QGMEMSLQRSVHQVLSCDNSDCIEKFRLRLR---GSVIES-DVCRWISNAVKRKVQELDI 122
+L V++ L ++ C++KF+L + +E+ W + VKRKVQ L I
Sbjct: 76 SSEFNALLGFVYRFLGFNSESCLQKFKLTVNWYDDVQLETVHFTEWFNAVVKRKVQHLHI 135
Query: 123 SLRLGKR--FPLPHILFTSESLITLKLEMRCALHIPRS--ICFPKLKSLYLSHAVFEDEK 178
+ R +P +FT SLI+L L +++P + P LK + L VF+++
Sbjct: 136 LDKTWGRDEVVIPPTVFTCGSLISLNL---YDVYLPNREFVSLPSLKVIVLDAVVFDEDF 192
Query: 179 SLNLLFSGCPVLQELVI 195
+ +L SGCPVL+ L +
Sbjct: 193 AFEMLVSGCPVLESLSV 209
>AT1G78760.1 | Symbols: | F-box family protein |
chr1:29615174-29616738 REVERSE
Length = 452
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 150/317 (47%), Gaps = 42/317 (13%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D +S LPE ++ I+ +P KD+V++S+LSKRW+ W+ P + + +Q +
Sbjct: 16 DRLSNLPESLICQIMLNIPTKDVVKSSVLSKRWRNLWRYVPGLNVEY---------NQFL 66
Query: 70 EMSLQRS-VHQVLSCDNSDCIEKFRLRLRGSVIE---SDVCRWISNAVKRKVQELDI-SL 124
+ + S V + L+ D C + FRLR E S+V RWI+ V +K++ LD+
Sbjct: 67 DYNAFVSFVDRFLALDRESCFQSFRLRYDCDEEERTISNVKRWINIVVDQKLKVLDVLDY 126
Query: 125 RLG-KRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
G + +P ++T ESL++LKL L P+ I P +K + L F + L +
Sbjct: 127 TWGNEEVQIPPSVYTCESLVSLKL-CNVILPNPKVISLPLVKVIELDIVKFSNALVLEKI 185
Query: 184 FSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCA-------VNIS 236
S C L+ L+I +V+++ V + R+L + KH+ C+ V I
Sbjct: 186 ISSCSALESLII---SRSSVDDINVLRVSSRSLLSF------KHIGNCSDGWDELEVAID 236
Query: 237 ARNLISLHCTSCLTINFSFCDLFSLVDAYIDV-------PSLWPSEGQKVALCAAKLLHG 289
A L L+ + T F + SLV+A I++ P P++ K + L
Sbjct: 237 APKLEYLNISDHSTAKFKMKNSGSLVEAKINIIFNMEELPH--PNDRPKRKMI-QDFLAE 293
Query: 290 ILRVKSLVLTEHATEVV 306
I VK L ++ H EV+
Sbjct: 294 ISSVKKLFISSHTLEVI 310
>AT4G27050.4 | Symbols: | F-box family protein |
chr4:13575884-13577429 REVERSE
Length = 453
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 34/322 (10%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D+IS LP++VL ILS +P K TS+LSKRW+ DFD + +N+
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 70 EMSLQRS-----------VHQVLS-CDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKV 117
E S S V + L+ N+ EKF L+ + + RWI A++R
Sbjct: 64 EASSYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHEDDGARINRWIRTALERGC 123
Query: 118 QELDISLRLGKRFPLPHILFTSESLITLKLE--MRCALHIP--RSICFPKLKSLYLSHAV 173
EL+ L P+ FTS +L+ L + H+ + FP LK+L L
Sbjct: 124 LELN--LEAANYLPIDSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPALKTLTLVSVC 181
Query: 174 FEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAV 233
F + +N GCP L+EL + W +S P ++ +TI D + ++
Sbjct: 182 FTSVEMINFFIHGCPALEELFLCVWMQ------YMSSPNVKRVTITSD--FDDDIQRPSM 233
Query: 234 NISARNLISLHCTSCLTINFSFCDLFSLVDAYIDV----PSLWPSEG---QKVALCAAKL 286
+ +L+ L +S + N+ + L SLV+A +D+ P ++ +G +V L
Sbjct: 234 VLKTPSLVYLDYSSYVAGNY-YVVLDSLVEARLDLRLYEPIIYDEDGLWNAEVFGNITNL 292
Query: 287 LHGILRVKSLVLTEHATEVVKF 308
+ I +K L L+ + EV +
Sbjct: 293 IEAIRTIKILHLSPSSLEVFYY 314
>AT4G27050.3 | Symbols: | F-box family protein |
chr4:13575884-13577429 REVERSE
Length = 453
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 34/322 (10%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D+IS LP++VL ILS +P K TS+LSKRW+ DFD + +N+
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 70 EMSLQRS-----------VHQVLS-CDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKV 117
E S S V + L+ N+ EKF L+ + + RWI A++R
Sbjct: 64 EASSYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHEDDGARINRWIRTALERGC 123
Query: 118 QELDISLRLGKRFPLPHILFTSESLITLKLE--MRCALHIP--RSICFPKLKSLYLSHAV 173
EL+ L P+ FTS +L+ L + H+ + FP LK+L L
Sbjct: 124 LELN--LEAANYLPIDSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPALKTLTLVSVC 181
Query: 174 FEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAV 233
F + +N GCP L+EL + W +S P ++ +TI D + ++
Sbjct: 182 FTSVEMINFFIHGCPALEELFLCVWMQ------YMSSPNVKRVTITSD--FDDDIQRPSM 233
Query: 234 NISARNLISLHCTSCLTINFSFCDLFSLVDAYIDV----PSLWPSEG---QKVALCAAKL 286
+ +L+ L +S + N+ + L SLV+A +D+ P ++ +G +V L
Sbjct: 234 VLKTPSLVYLDYSSYVAGNY-YVVLDSLVEARLDLRLYEPIIYDEDGLWNAEVFGNITNL 292
Query: 287 LHGILRVKSLVLTEHATEVVKF 308
+ I +K L L+ + EV +
Sbjct: 293 IEAIRTIKILHLSPSSLEVFYY 314
>AT4G27050.2 | Symbols: | F-box family protein |
chr4:13575884-13577429 REVERSE
Length = 453
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 34/322 (10%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D+IS LP++VL ILS +P K TS+LSKRW+ DFD + +N+
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 70 EMSLQRS-----------VHQVLS-CDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKV 117
E S S V + L+ N+ EKF L+ + + RWI A++R
Sbjct: 64 EASSYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHEDDGARINRWIRTALERGC 123
Query: 118 QELDISLRLGKRFPLPHILFTSESLITLKLE--MRCALHIP--RSICFPKLKSLYLSHAV 173
EL+ L P+ FTS +L+ L + H+ + FP LK+L L
Sbjct: 124 LELN--LEAANYLPIDSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPALKTLTLVSVC 181
Query: 174 FEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAV 233
F + +N GCP L+EL + W +S P ++ +TI D + ++
Sbjct: 182 FTSVEMINFFIHGCPALEELFLCVWMQ------YMSSPNVKRVTITSD--FDDDIQRPSM 233
Query: 234 NISARNLISLHCTSCLTINFSFCDLFSLVDAYIDV----PSLWPSEG---QKVALCAAKL 286
+ +L+ L +S + N+ + L SLV+A +D+ P ++ +G +V L
Sbjct: 234 VLKTPSLVYLDYSSYVAGNY-YVVLDSLVEARLDLRLYEPIIYDEDGLWNAEVFGNITNL 292
Query: 287 LHGILRVKSLVLTEHATEVVKF 308
+ I +K L L+ + EV +
Sbjct: 293 IEAIRTIKILHLSPSSLEVFYY 314
>AT4G27050.1 | Symbols: | F-box family protein |
chr4:13575884-13577429 REVERSE
Length = 453
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 34/322 (10%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D+IS LP++VL ILS +P K TS+LSKRW+ DFD + +N+
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 70 EMSLQRS-----------VHQVLS-CDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKV 117
E S S V + L+ N+ EKF L+ + + RWI A++R
Sbjct: 64 EASSYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHEDDGARINRWIRTALERGC 123
Query: 118 QELDISLRLGKRFPLPHILFTSESLITLKLE--MRCALHIP--RSICFPKLKSLYLSHAV 173
EL+ L P+ FTS +L+ L + H+ + FP LK+L L
Sbjct: 124 LELN--LEAANYLPIDSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPALKTLTLVSVC 181
Query: 174 FEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAV 233
F + +N GCP L+EL + W +S P ++ +TI D + ++
Sbjct: 182 FTSVEMINFFIHGCPALEELFLCVWMQ------YMSSPNVKRVTITSD--FDDDIQRPSM 233
Query: 234 NISARNLISLHCTSCLTINFSFCDLFSLVDAYIDV----PSLWPSEG---QKVALCAAKL 286
+ +L+ L +S + N+ + L SLV+A +D+ P ++ +G +V L
Sbjct: 234 VLKTPSLVYLDYSSYVAGNY-YVVLDSLVEARLDLRLYEPIIYDEDGLWNAEVFGNITNL 292
Query: 287 LHGILRVKSLVLTEHATEVVKF 308
+ I +K L L+ + EV +
Sbjct: 293 IEAIRTIKILHLSPSSLEVFYY 314
>AT3G03360.1 | Symbols: | F-box family protein | chr3:795218-796918
FORWARD
Length = 481
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 4 HVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFK- 62
++ + D+IS LP+++L ILS+LP + ++TS+LS+RW++ W F D
Sbjct: 31 YLKEAGDLISRLPDDILQLILSYLPTRLAIKTSVLSRRWRHVWSDTWSLSFHRDRPDAPC 90
Query: 63 NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDI 122
NR + + ++ SC + CI + +D+ WI+ A+ R V+ L +
Sbjct: 91 INRILDRYRAPKMMSFRICSCCRAACISR-------PDTHADIDSWINFAMSRNVENLSL 143
Query: 123 SLRLGKRFPLPHILFTSESLITLKLEMRC-----ALHIPRSICFPKLKSLYLSHAVFEDE 177
L K + +P L+ + SL L L+ C +L+ S+ + LK+L L H DE
Sbjct: 144 YLDEDK-YDIPEFLYINSSLKQLYLDFGCKKDFISLNPKCSVSWTSLKNLSLYHCNISDE 202
Query: 178 KSLNLLFSGCPVLQELVIY 196
S+ ++ SGCP+L+ L+++
Sbjct: 203 -SIAIILSGCPILESLLLF 220
>AT3G49040.1 | Symbols: | F-box family protein |
chr3:18177676-18179339 FORWARD
Length = 415
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 25/243 (10%)
Query: 7 DGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRS 66
+ D IS L E +L +I+S LP K +V TS+LSKRW++ WK+ F +
Sbjct: 8 ENEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKFVS---------- 57
Query: 67 QGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRL 126
+ V++ + +E L + SD+ + A R V+ L + L
Sbjct: 58 -KYHQTFSEDVYRFFMLHKAPFLESLDLEFSNQLDASDLGILVGIAFARHVRNLVLDLDY 116
Query: 127 --------GKRFPLPHILF-TSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDE 177
RFP ++ +++L TL L+ L+ P +C L+ L+L F +
Sbjct: 117 YSNFSQLCAARFPSGLCIYDNNKTLETLTLKHSILLYFPYRVCLKSLRKLHLYKVHFYGK 176
Query: 178 KSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISA 237
S+ L GCP L++L+++ Y E +E T+++P+L LTI F GC I+A
Sbjct: 177 DSVYNLLCGCPSLRDLIVHR-YRECMETFTIAVPSLERLTIEDSGFG----YGCCYVINA 231
Query: 238 RNL 240
+L
Sbjct: 232 PSL 234
>AT5G56400.1 | Symbols: | F-box family protein |
chr5:22846069-22847615 REVERSE
Length = 455
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 29/273 (10%)
Query: 8 GMDIISVLPEEVLHYILSFLPM-KDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRS 66
+D IS LPE++L +ILS LP DIV TS +SKRW+ W + F+ D K S
Sbjct: 31 NVDKISDLPEDLLVHILSLLPTTNDIVATSGVSKRWESLWTKVHKLRFNDRIYDGKRYDS 90
Query: 67 QGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDIS--- 123
V + L + + RL + D+ WI A+ R + EL I
Sbjct: 91 ------FLHFVEKSLILHKAPTLVSLRLSVGPKCTADDIGLWIKLALDRNICELIIKHYP 144
Query: 124 ----LRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKS 179
+RL +R L S++L++LKL+ I CF LK+L+L + + ++S
Sbjct: 145 DHGHIRLSRR------LCDSKTLVSLKLKNAILGAIWLPTCFISLKTLHLRYVKYSGDES 198
Query: 180 LNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVN----I 235
+ L S CP L+ LV+ + V+ + + L++LT+Y P L G A + I
Sbjct: 199 VRTLISSCPSLRNLVVKRHNEDNVKRFAIIVRYLQSLTVYLSP-----LHGVADSDAYVI 253
Query: 236 SARNLISLHCTSCLTINFSFCDLFSLVDAYIDV 268
+ NL L+ T SF D+ L +A +DV
Sbjct: 254 NTPNLKYLNIKDHYTDLCSFEDMPYLDEANLDV 286
>AT3G49020.1 | Symbols: | F-box family protein |
chr3:18169079-18170660 FORWARD
Length = 447
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 15/229 (6%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LPE +L ILS LP + ++ TS+LSK+WK WK P FD+
Sbjct: 22 DRISELPEALLLLILSSLPTETVIATSVLSKQWKSLWKLVPNLKFDS---------KYHY 72
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK- 128
+ +V + L + ++ L++ DV I A R +++ + + L +
Sbjct: 73 HYTFSDNVFRSLISHKAPVLDSLHLKVEDKDDALDVGILIGIAFSRHMRKFVLKITLLEE 132
Query: 129 ---RFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
RFP +++L L+L+ L P +C L+ LYL H F DE+S+ L
Sbjct: 133 SFVRFP-SAWCSCNDTLEILELKYCILLDFPSLVCLKSLRKLYLYHVRFNDEESVCNLLC 191
Query: 186 GCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVN 234
GCP L++LV++ VE+ T+++P+L+ LTI YD + + + G +N
Sbjct: 192 GCPSLEDLVVHRHSTTDVESYTIAVPSLQRLTI-YDDYYGEGVGGYVIN 239
>AT1G13780.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT5G27750.1); Has 1281 Blast hits to 1250
proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 1279; Viruses - 0;
Other Eukaryotes - 2 (source: NCBI BLink). |
chr1:4724681-4726314 FORWARD
Length = 456
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 21/208 (10%)
Query: 1 MRQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
M V G D IS LPE ++ IL LP K V+TS+LS RWK W + P D +
Sbjct: 1 MESTVMPGFDRISELPESLISQILLHLPTKASVKTSVLSTRWKNLWLNVPGLDLNCRDFP 60
Query: 61 FKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRL-RGSVIESDVCRWISNAVKRKVQE 119
F+NN E L + + L +N ++KF++ R +I+ I +A+ R ++
Sbjct: 61 FQNNN----EKLLIDFIDRFLQFNNESRLQKFKVDYSRDKIIK--FSDRIGDAISRGIRV 114
Query: 120 LDISLRLGKR-------FP----LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLY 168
LD+ R +P +P L++ ++L++LKL L P + P LK ++
Sbjct: 115 LDVESNTYYRDADDCIDYPCIEFMPLNLYSCKTLVSLKLSY-SGLEDPGFVYLPCLKFMH 173
Query: 169 LSHAVFEDEKSLNL--LFSGCPVLQELV 194
L ++ ++NL L SGCPVL+EL+
Sbjct: 174 LREVRWDSSGTMNLEKLVSGCPVLEELI 201
>AT5G38390.1 | Symbols: | F-box family protein |
chr5:15366432-15368053 FORWARD
Length = 456
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 111/217 (51%), Gaps = 18/217 (8%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD++S LP E+L +ILSFL K+ TS+LSKRW+ P + D + D R
Sbjct: 1 MDLLSNLPYELLCHILSFLTTKEAALTSVLSKRWRNLIAFVP--NVDIVDHDI---RELF 55
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD-VCRWISNAVKRKVQELDISLRLG 127
M+ V +VL+ + I KF L G ++SD V WI N + R V EL++S+ +
Sbjct: 56 MDF-----VDRVLALQGNSPINKFSLDCSG--VDSDRVDCWIQNVMVRGVSELNLSIFVD 108
Query: 128 KRFPLPHILFTS--ESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
F + LF E+ +KL + + SI P LK+L L + EK +L
Sbjct: 109 SVFEDDYNLFPKVFENKKLVKLGLSYISWLDGSIFLPMLKTLVLESVLLSVEK-FEILLH 167
Query: 186 GCPVLQELVIYCWYWET--VENVTVSLPTLRTLTIYY 220
P L+ELV+ YW+ V ++ VS +L+TLTI +
Sbjct: 168 ALPALEELVMNNIYWKERDVVDLIVSSESLKTLTINF 204
>AT1G05080.1 | Symbols: | F-box family protein |
chr1:1459091-1460579 FORWARD
Length = 439
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 127/267 (47%), Gaps = 19/267 (7%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDF-DAMSDDFKNNRSQG 68
D ISVLPE++L IL LP KD+V T +LSKRW W ++ D M D+ K +
Sbjct: 13 DRISVLPEDLLVVILDLLPTKDVVATMILSKRWLSIWTMVRTLEYTDDMDDESKKSVWWF 72
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIES-DVCRWISNAVKRKVQELDISLRLG 127
+ SLQ V+ +S C+E L + + D+ +W++ AV V L I L L
Sbjct: 73 LNKSLQLHKAPVI---DSLCME---LGPQCPTTDDVDIGKWVAKAVDCLVMTLTIKL-LW 125
Query: 128 KRFP--LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFS 185
P LP L++ SL L L + +++P S P L L L V++DE SL S
Sbjct: 126 SAGPTSLPKSLYSCTSLSELTLSDQILVNVPSSAYLPSLTELELICVVYKDEDSLVSFLS 185
Query: 186 GCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGC----AVNISARNLI 241
CPVL+ L + + V+ TV +P+L LT Y C + VN A N
Sbjct: 186 SCPVLEFLFVLRKIDDNVKTFTVKVPSLLELT--YKNLCSDVVDNTDRCLVVNAPAVN-- 241
Query: 242 SLHCTSCLTINFSFCDLFSLVDAYIDV 268
+ T +FS D+ L DA IDV
Sbjct: 242 TCQITDYSLESFSIEDMPCLQDATIDV 268
>AT5G02910.1 | Symbols: | F-box family protein | chr5:677120-678907
FORWARD
Length = 458
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 7 DGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRS 66
DGMD IS LP+E+LH+ILS +P K +RTSLLSKRW+Y W P D D
Sbjct: 8 DGMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCRRAD------ 61
Query: 67 QGMEMSLQRSVHQVLSCDNSDCIEKFRLR--LRGSVIESDVCRWISNAVKRKVQELDISL 124
S+ + LS ++ I F L L + + C I A+ ++L +
Sbjct: 62 -------PNSIDKTLSFFSAPKITSFHLHTTLLNRIDSVNGC--IEFAISHNAEKLSLES 112
Query: 125 R--LGKRFPLPHILFTSESLITLKLEMRCALHIPR-SICFPKLKSLYLSHAVFEDEKSLN 181
R + + P +T+ S+ L ++ IPR ++ + LK+L LS+ DE L
Sbjct: 113 RDYRVRNYKFPDFFYTNSSVKQLFVDSGSVHLIPRCTVSWTSLKNLSLSNCTLSDESFLK 172
Query: 182 LLFSGCPVLQELVIYC 197
+L + ++YC
Sbjct: 173 ILSGSPLLESLELLYC 188
>AT5G53640.1 | Symbols: | F-box family protein |
chr5:21785999-21790690 REVERSE
Length = 917
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 15/192 (7%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS E +L IL++LP KD+V+TS+LS RW+ W P + D S DF + +
Sbjct: 22 DRISQFYESLLCQILNYLPTKDVVKTSVLSTRWRSLWLLVPSLELD--SRDFSDFNTFVS 79
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD---VCRWISNAVKRKVQELDISLRL 126
++VL CI K +L + + E D + WI A KRK+Q LD+ L
Sbjct: 80 FCDRYFDSNRVL------CINKLKLTISEN--EEDGFYLKSWIDAAAKRKIQHLDVQF-L 130
Query: 127 GKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
+ + L+ E+L++L+L +L R FP +K+++L V+ +E + L S
Sbjct: 131 PQFHKIHFNLYKCEALVSLRL-FEVSLDKGRIFSFPCMKTMHLEDNVYPNEATFKELISC 189
Query: 187 CPVLQELVIYCW 198
CPVL++L + +
Sbjct: 190 CPVLEDLTVIIY 201
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 30 KDIVRTSLLSKRWKYKWKSNPRYDFDAMS-DDFKNNRSQGMEMSLQRSVHQVLSCDNSDC 88
+D+V T +LS RW+ W P + +++ DF S G + + C
Sbjct: 511 QDLVTTRVLSTRWRSLWLWLPCLELNSLYFPDFNAFVSFG---------DKFFDSNRVSC 561
Query: 89 IEKFRLRLRGSVIESD----VCRWISNAVKRKVQELDISLRLGKR-FPLPHILFTSESLI 143
I KF+L + G + D + WI AVK K+Q L + K + +P L+ E+L+
Sbjct: 562 INKFKLYIYGYDVGVDDPSYLTSWIDAAVKCKIQHLHVQCLPAKYIYEMPLSLYICETLV 621
Query: 144 TLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVLQELVIY 196
LKL R L + P LK+++L + F +E +L S CPVL+EL IY
Sbjct: 622 YLKL-CRVMLDDAEFVSLPCLKTIHLEYVWFPNEANLERFVSCCPVLEELKIY 673
>AT2G29930.3 | Symbols: | F-box family protein |
chr2:12756457-12758087 REVERSE
Length = 459
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 135/312 (43%), Gaps = 37/312 (11%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LP+E+L ILS TS+LSKRW+ + + D+ N + G
Sbjct: 12 DYISSLPDEILGKILSLFCTNRAACTSVLSKRWR---------NLLELVDNLDLNDAYGN 62
Query: 70 EMSLQRSVHQVLSC-DNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
V + L+ NS +++F L S V WI R LD+ L
Sbjct: 63 HQYFCDFVDRTLALLSNSTTVKRFSLNCAFHNDASRVNSWIRTVFDRGF--LDLHLETAH 120
Query: 129 RFPLPHILFTSESLITLKL------EMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNL 182
+ FTS +L+ L + E R P + FP LKSL L F D
Sbjct: 121 MHRIDTEFFTSNTLLELTICGGFYAEGRLP---PGRVFFPALKSLSLVSVEFTDTLMYQN 177
Query: 183 LFSGCPVLQELVIY------CWYWETVENVTVSLPTLRTLTIYYDPFCPKH-LLGCAVNI 235
SGCPVL+EL ++ C W+ + VS P+++ L IY +P ++ C I
Sbjct: 178 FISGCPVLEELFLHYDNETQCPAWKGL----VSSPSIKRLNIYDNPSELRYEAYKCCFQI 233
Query: 236 SARNLISLHCTSCLTINFSFCDLFSLVDAYIDV--PSLWPSEGQKVALCAAKLLHGILRV 293
+ L+ L +S + ++ DL SL +A +++ P + + + LL GI V
Sbjct: 234 PS--LVYLDYSSYVAKQYAV-DLVSLEEARLNIRYPERLVDQNEDIFGDVTDLLKGISNV 290
Query: 294 KSLVLTEHATEV 305
K+L L+ + EV
Sbjct: 291 KTLHLSSDSLEV 302
>AT2G29930.1 | Symbols: | F-box family protein |
chr2:12756457-12758087 REVERSE
Length = 459
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 135/312 (43%), Gaps = 37/312 (11%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LP+E+L ILS TS+LSKRW+ + + D+ N + G
Sbjct: 12 DYISSLPDEILGKILSLFCTNRAACTSVLSKRWR---------NLLELVDNLDLNDAYGN 62
Query: 70 EMSLQRSVHQVLSC-DNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
V + L+ NS +++F L S V WI R LD+ L
Sbjct: 63 HQYFCDFVDRTLALLSNSTTVKRFSLNCAFHNDASRVNSWIRTVFDRGF--LDLHLETAH 120
Query: 129 RFPLPHILFTSESLITLKL------EMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNL 182
+ FTS +L+ L + E R P + FP LKSL L F D
Sbjct: 121 MHRIDTEFFTSNTLLELTICGGFYAEGRLP---PGRVFFPALKSLSLVSVEFTDTLMYQN 177
Query: 183 LFSGCPVLQELVIY------CWYWETVENVTVSLPTLRTLTIYYDPFCPKH-LLGCAVNI 235
SGCPVL+EL ++ C W+ + VS P+++ L IY +P ++ C I
Sbjct: 178 FISGCPVLEELFLHYDNETQCPAWKGL----VSSPSIKRLNIYDNPSELRYEAYKCCFQI 233
Query: 236 SARNLISLHCTSCLTINFSFCDLFSLVDAYIDV--PSLWPSEGQKVALCAAKLLHGILRV 293
+ L+ L +S + ++ DL SL +A +++ P + + + LL GI V
Sbjct: 234 PS--LVYLDYSSYVAKQYAV-DLVSLEEARLNIRYPERLVDQNEDIFGDVTDLLKGISNV 290
Query: 294 KSLVLTEHATEV 305
K+L L+ + EV
Sbjct: 291 KTLHLSSDSLEV 302
>AT5G25860.1 | Symbols: | F-box family protein |
chr5:9016908-9018424 REVERSE
Length = 448
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 20/239 (8%)
Query: 2 RQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWK------SNPRYDFD 55
R+ + D ++ LP+E+L ILS+LP K V TSL+SKRW+ + + + +
Sbjct: 4 RKVKSSSRDAVNCLPDEILAKILSYLPTKRAVSTSLISKRWRNLFALMIQLFESQHHLYL 63
Query: 56 AMSDDFKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSV---IESDVCRWISNA 112
SD +G +Q S + +DC +L + + D+ +W+ +A
Sbjct: 64 DDSDLVYPEEGKGEMKDVQESFGDFVDKTLTDCNTIKKLSILCPLKCCAHKDIDQWLHHA 123
Query: 113 VKRKVQELDISLRLG---KRFPLPHILFTSESLITLKLEMRCAL----HIPRSICFPKLK 165
++R V +LD+ ++G + P +FT ++L+ L + + P+ + P LK
Sbjct: 124 MERGVVDLDMRFKMGFTPTQNEWPCNVFTIKTLVKLTFRIEVGQNKMPYCPKGV-LPVLK 182
Query: 166 SLYLSHAVFEDEKSLNLLFSGCPVLQELVIY---CWYWETVENVTVSLPTLRTLTIYYD 221
SL+L F E+ + + GCP+L+EL ++ + + N ++S TL+ LT++++
Sbjct: 183 SLFLHAIWFACERLCHSMLPGCPILEELFLHDLRGYRYNDSPNFSISHKTLKRLTVHFN 241
>AT3G10750.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT1G05080.1); Has
597 Blast hits to 573 proteins in 6 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:3366927-3368269 FORWARD
Length = 299
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 23/252 (9%)
Query: 37 LLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRL 96
+LSKRW++ W P+ ++ ++ K S+ + + L + +E R+ L
Sbjct: 2 ILSKRWRFLWTMLPKLEYTESNEGGK---------SIWDLLEKSLQLHKAPSVESLRIML 52
Query: 97 RGSV-IESDVCRWISNAVKRKVQELDISLRLGKRFPLPHILFTSESLITLKLEMRCALHI 155
++ DV +W+SNAV R V+EL +SL P L+TS++L+ L L + + +
Sbjct: 53 GPQCPVDVDVGKWVSNAVDRYVRELTLSLSFLSD-PASKRLYTSKTLVKLNLMGKILVDV 111
Query: 156 PRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRT 215
P + C P L+SL L + V++D+ S L CPVL+ L++ +NVT + + ++
Sbjct: 112 PSAACLPSLQSLLLVNVVYKDQDSHVRLLLSCPVLRYLLVIR---NKSDNVTRFIDS-QS 167
Query: 216 LTIYYDPFCPKHLLGCAVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSE 275
L K+ G ++ I + L L L NFS ++ L A + + +P++
Sbjct: 168 LE--------KNGSGRSLVIDSPGLNYLSIIDSLGGNFSIQNMPCLEKAIVSLCGFYPND 219
Query: 276 GQKVALCAAKLL 287
+ + K+L
Sbjct: 220 KFLTSFSSVKIL 231
>AT3G18150.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana
protein match is: F-box family protein
(TAIR:AT5G02910.1). | chr3:6217929-6219500 FORWARD
Length = 456
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 136/278 (48%), Gaps = 43/278 (15%)
Query: 2 RQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDF 61
R+ + + +D IS LP+ +L +ILSF+P K + TSLLSKRW++ W P F +D+
Sbjct: 23 RRKIKEAVDSISSLPDVILQHILSFIPTKLAITTSLLSKRWRHVWCDTPSLSF----NDY 78
Query: 62 KNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIES--DVCRWISNAVKRKVQE 119
+ + ++ +L R + R L S+I + + WI A+ R V
Sbjct: 79 R-LEAPFIDETLTRYTAS----------KMMRFHLHTSLINNVPHLESWIKFAMSRNVDH 127
Query: 120 LDISL--RLGKRFPLPHILFTSESL--ITLKLEMRCALHIPRSICFPKLKSLYLSHAVFE 175
L + L ++ +F P + SL +T+ L+ + +IC LK LYLS +
Sbjct: 128 LSLDLWNQVANKFKFPDFFHINSSLKQLTVVLDFSDTM---IAIC---LKKLYLSTCLLS 181
Query: 176 DEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNI 235
DE N+LF GCP+L+ L + V +++ SL LRTL I + + P+ +
Sbjct: 182 DESMANILF-GCPILESLTLDHCGGLRVLDLSKSL-RLRTLEINCNIWVPE--------L 231
Query: 236 SARNLISLHCTSCLTINF-----SFCDLFSLVDAYIDV 268
+A +++ H T CL + S D+ SL +A +++
Sbjct: 232 TAMQIVAPH-THCLRLRNSKLPCSLVDVSSLKEAKLNI 268
>AT5G44490.1 | Symbols: | F-box family protein |
chr5:17924035-17925843 FORWARD
Length = 455
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 22/226 (9%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D++S L + ++ +L +LP K+ V TS+LS RWK W P D D S F +N +
Sbjct: 17 DLMSKLTDALISQVLFYLPTKEAVSTSVLSSRWKSVWLLIP--DLDLNSSAFPSNNAF-- 72
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD----VCRWISNAVKRKVQELDISLR 125
+ +NS C+ K +L +R E+D V RWI K++ LD+
Sbjct: 73 -VGFIDKFIDFSKIENS-CLHKLKLSIRKEH-ENDNKSCVTRWIGFVATHKLKHLDVECL 129
Query: 126 LGKRFPL---PHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNL 182
L K+ L P L+ +++L L+L R L SI P LK+++L V+ +E L
Sbjct: 130 LWKKKCLEVMPLTLYITQTLFYLRLH-RVLLGNVESISLPCLKTMHLEQNVYANETCLEF 188
Query: 183 LFSGCPVLQELVI-------YCWYWETVENVTVSLPTLRTLTIYYD 221
S CPVL++L I + Y+ V + P L+ L I D
Sbjct: 189 FISSCPVLEDLSIVRKHRRGFHGYYSLDFGVLIDAPRLKYLKIGDD 234
>AT5G53840.1 | Symbols: | F-box family protein (FBL13) |
chr5:21859148-21860672 REVERSE
Length = 444
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 21/295 (7%)
Query: 12 ISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEM 71
+S LP+ ++ ILS L KD VRTS+LS RW+ W+ P DFD+ + RS +
Sbjct: 20 LSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPVLDFDS-----RELRSFSEFV 74
Query: 72 SLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGKRFP 131
S S + I+K R+ + + WI + ++Q +DIS+ F
Sbjct: 75 SFAGSFFYL---HKDSYIQKLRVCIYDLAGNYYLTSWIDLVTRHRIQHIDISVFTCSGFG 131
Query: 132 -LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVL 190
+P L+T ++L+ LKL R + + P LK L L F +E +L+ + S PVL
Sbjct: 132 VIPLSLYTCDTLVHLKLS-RVTMVNVEFVSLPCLKILDLDFVNFTNETTLDKIISCSPVL 190
Query: 191 QELVIYCWYWETVENVTVSLPTLRTLTIY--YDPFCPKHLLGCAVNISARNLISLHCTSC 248
+EL I + V+ + V TL+ + I+ +D +H G ++ +S+ S
Sbjct: 191 EELTIVKSSEDNVKIIQVRSQTLKRVEIHRRFD----RH-NGLVIDTPLLQFLSIKAHSI 245
Query: 249 LTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGILRVKSLVLTEHAT 303
+I F + VD IDV L P++ ++ I RV+SLV+ H T
Sbjct: 246 KSIEFINLGFTTKVD--IDVNLLDPNDLSNRSM-TRDFFTTISRVRSLVI-RHGT 296
>AT5G50270.1 | Symbols: | F-box family protein |
chr5:20457487-20458873 FORWARD
Length = 381
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 105/215 (48%), Gaps = 12/215 (5%)
Query: 9 MDIISVLPEEVLHYILSFLP-MKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
MD IS LP+E+L +LS LP +KD+V T +LSKRW++ W P+ +D D N
Sbjct: 1 MDRISGLPDELLLRVLSLLPNVKDVVVTMVLSKRWQFLWMMVPKLVYD----DSYQNLEY 56
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLG 127
G R V + L + IE +L + D+ WI A K +EL I +
Sbjct: 57 G---KFSRFVDRSLFMRKAPGIETLHFKLGQNCGNGDIQWWIRAASKFCFRELIIEINCS 113
Query: 128 KRFP---LPHILFTS-ESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
LP L+T L+TLKL+ + + CFP LK+L L + + + L
Sbjct: 114 TSASPSILPRSLYTECRMLVTLKLKKAVLVDVSSPTCFPSLKNLSLVSVKYPGNEFVKSL 173
Query: 184 FSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
S C VL++LV+ + V +V +P+L++L +
Sbjct: 174 LSSCHVLEDLVVEQCINDNVTIFSVKVPSLKSLVL 208
>AT4G13960.1 | Symbols: | F-box family protein |
chr4:8060681-8062231 REVERSE
Length = 434
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 21/170 (12%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAM----SDDFKNN 64
MD +S LP+EVL++ILSFL K+ TS+LSKRW+ + P D D + K +
Sbjct: 1 MDHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKED 60
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
R + ++ S + V +VL+ + I+K L+LR V WISNA+ R V ELD+ +
Sbjct: 61 RYE-IQKSFMKFVDRVLALQGNSPIKKLSLKLRTGFDSHRVDGWISNALARGVTELDLLI 119
Query: 125 RLGKRFPLPHILFTSESLITLKLE-MRCALHIPRSICFPKLKSLYLSHAV 173
L +L+TLKL +R I P LK+L L H+V
Sbjct: 120 IL--------------NLVTLKLNSVRVDWLAAGDIFLPMLKTLVL-HSV 154
>AT5G56810.1 | Symbols: | F-box family protein |
chr5:22974520-22975992 FORWARD
Length = 435
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 27/220 (12%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LP ++L ILS +P+ D + TSLLSKRWK WK P ++ S N S G
Sbjct: 15 DRISQLPNDLLFRILSLIPVSDAMSTSLLSKRWKSVWKMLPTLVYNENS--CSNIGSLGF 72
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSV--IESDVCRWISNAVKRKVQELDISLRLG 127
+ RS L + ++ L LR ++S + I + + L+ S++
Sbjct: 73 DQFCGRS----LQLHEAPLLKTLTLELRKQTDSLDSSIFPNIHSTL------LEFSIK-S 121
Query: 128 KRFPL-------PHILFTSESLITLKLEMRCALHIPRS-ICFPKLKSLYLSHAVFEDEKS 179
+P+ P+ L ++L+ LKL+ L + S +CF LKSLYL+ FE+E+S
Sbjct: 122 TGYPVYYSTISFPNNLDVFQTLVVLKLQGNICLDVVDSPVCFQSLKSLYLTCVNFENEES 181
Query: 180 LNLLFSGCPVLQELVI--YCWYWETVENVTVSLPTLRTLT 217
+ L S CPVL++L + C + ++S+P+L+ LT
Sbjct: 182 FSKLLSACPVLEDLFLQRLCSVGRFL--FSISVPSLQRLT 219
>AT5G52460.1 | Symbols: EDA41 | EDA41 (embryo sac development arrest
41) | chr5:21292375-21293758 REVERSE
Length = 369
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 40/189 (21%)
Query: 3 QHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFK 62
+ V D IS LP+++L IL +P+KD V T +LSKRW+Y W P+ ++ D+
Sbjct: 10 EEVVASRDEISSLPDDLLIQILLLVPIKDAVGTMILSKRWRYVWTLLPKLEYSDPGDE-- 67
Query: 63 NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDI 122
C++ D V + ++NAV R V++L++
Sbjct: 68 --------------------CESVD-----------------VGKLVANAVDRFVRKLEL 90
Query: 123 SLR-LGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLN 181
L + LP L+T ++L+ L L + + +P S+C P L L L + VF+DE SL
Sbjct: 91 ELHWTAEPTSLPKSLYTCKTLVELTLSDKIIVDVPSSVCLPSLNILRLFYVVFKDENSLE 150
Query: 182 LLFSGCPVL 190
L S C VL
Sbjct: 151 RLISSCSVL 159
>AT5G03100.1 | Symbols: | F-box family protein | chr5:726832-727980
FORWARD
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 18/229 (7%)
Query: 3 QHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFK 62
+ G+D IS LP+E+LH+IL+ P K +RTS+LSKRWK+ W P D
Sbjct: 2 KRAGGGVDFISSLPDEILHHILANTPTKLAIRTSVLSKRWKHVWYETPSISIVCNRVD-- 59
Query: 63 NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDI 122
S+++ LS ++ I+ F + + V ++ WI+ A+ RK + ++
Sbjct: 60 -----------PDSLNKTLSSYSTPKIKSFDVTISRDVTVPEIDTWINLALSRKAE--NV 106
Query: 123 SLRLGKRFPLPHILFTSESLITLKLEM-RCALHIPRSICFPKLKSLYLSHAVFEDEKSLN 181
SLR + F + SL L L + C L+ + + L++L L+ D+ S+
Sbjct: 107 SLRFTSHYRFRDTFFINSSLKQLSLTLVYCILNPKCVVSWSSLRNLSLNRCKVSDD-SIA 165
Query: 182 LLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLG 230
+ +GC +L+ L + +++ SL +LR L I D + P+ ++
Sbjct: 166 KILTGCSLLESLTLNLCDRLNDLDLSKSL-SLRRLEILGDRWTPERIVA 213
>AT1G60400.1 | Symbols: | F-box family protein |
chr1:22254405-22255798 FORWARD
Length = 403
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 3 QHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFK 62
+ + G+D +S LPE +L ILS L KD VRTS+LSK W+ W P + + + DF
Sbjct: 7 KSIGSGIDRLSALPEHLLCRILSELSTKDSVRTSVLSKHWRNLWLHVPVLELE--TSDFP 64
Query: 63 NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRW-ISNAVKRKVQELD 121
+N + + + + + D ++ F + +V+ D W I + VKR+V +L
Sbjct: 65 DN------LVFREFIDRFVGFDKEIDLKSFDIFYDVNVLWYDDFLWMIDDVVKRRVCDLM 118
Query: 122 IS----LRLGKRFPLPHILFTSESLITLKLEMRCALHIP-RSICFPKLKSLYLSHAVFED 176
++ + K +P L++ +L+ L L ++P S+C P++K+LYL +
Sbjct: 119 VTNNPYVVNEKLVKMPISLYSCATLVNLNLSFVAMNNLPSESVCLPRVKTLYLHGVKLDG 178
Query: 177 EKSLNLLFSGCPVLQELVI 195
+ L L S C VL++L +
Sbjct: 179 DSILGTLVSSCSVLEDLTV 197
>AT4G03220.1 | Symbols: | F-box family protein |
chr4:1417472-1419148 FORWARD
Length = 498
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
+D IS LP+ + H IL LP+K + SLLSKRW+ + S P DF ++ +D KN +S
Sbjct: 23 VDRISNLPDSLNHQILLLLPLKSAAQASLLSKRWRSLFLSLPDLDFTSI-NDLKNPKSFS 81
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFR-LRLRGSVIESDVCRWISNAVKRKVQELDISLRLG 127
S+++VLS + R LR R V + + I AV +VQ+LDI +
Sbjct: 82 -----SNSIYKVLSLRSHRDSNNLRSLRFRVPVTFTSLNSLIRLAVTHQVQDLDIEVTTK 136
Query: 128 KRFPLPHILFTSESLITLKLE-MRCALHIPRSIC----FPKLKSLYLSHAVFEDEKSLNL 182
F P + TS++L L L+ +P S F KL SL LS + ++ L+
Sbjct: 137 DYFNFPRWIVTSQNLRALTLKSANLGFRLPPSSSARGGFQKLTSLSLSRVILHNQPCLSD 196
Query: 183 LFS--GCPVLQELVIYC 197
F+ P+L++L + C
Sbjct: 197 FFTDPSFPLLEKLTLEC 213
>AT1G21990.1 | Symbols: | F-box family protein |
chr1:7740530-7742106 REVERSE
Length = 465
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D+IS P+E+L ILSFLP TS+LSKRW+ P D +++D + R
Sbjct: 9 DLISGSPDEILGKILSFLPTHHAATTSVLSKRWR---NLLPLVDKLELTEDHPSGRCS-- 63
Query: 70 EMSLQRSVHQVLSCDNSDC--IEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLG 127
+ V + L+ + C I+K L ES WI ++R V LD L
Sbjct: 64 -LGFPDFVEKTLALLDRPCSVIKKVHLNCDHLHGESRFYSWIRTVLERGV--LDFHLESS 120
Query: 128 KRFPLPHILFTSESLITLKLEMRCALH-----IPRSICFPKLKSLYLSHAVFEDEKSLNL 182
+ + + FTS +L+ +L + AL+ P + FP LK L + F D +
Sbjct: 121 RMYRVETEFFTSNTLV--ELTISGALYPEGELPPGGLFFPALKRLSIVLVAFADCDMYDD 178
Query: 183 LFSGCPVLQELVIYCWYWETVE----NVTVSLPTLRTLTIYYD 221
GCPVL+EL++Y Y + + N VS P+++ LTI +D
Sbjct: 179 FVLGCPVLEELILY--YADDDQPPGWNGKVSSPSIKRLTISHD 219
>AT2G42720.1 | Symbols: | F-box family protein |
chr2:17785653-17787211 FORWARD
Length = 443
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 146/323 (45%), Gaps = 32/323 (9%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS LP+E+L +ILSFL K+ TS LS RWK + P D + +N R
Sbjct: 1 MDRISSLPDEILEHILSFLSTKEAALTSSLSTRWKNVFVFVPSLHLD-YARQHENPRE-- 57
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRL-----RGSVIESDVCRWISNAVKR-KVQELDI 122
+ V+ + + + I+K L++ + ++ V WI + R V +LD+
Sbjct: 58 -FIDFVDFVNTLFNRKGNSPIKKLALKIHLKDNQSLQNQTHVQSWIHRVLSRGGVTDLDL 116
Query: 123 SLRLGKRFPL-PHILFTSESLITLKLEMRCALHI-PRSICFPKLKSLYLSHAVFE-DEKS 179
+ +F L P ++F S +L+ L+L + + ++ P LK+L L F+ D
Sbjct: 117 FITFKGKFQLVPLLIFKSNTLVKLRLGRGFTIKLCHENVYLPMLKTLCLDTVDFDGDHNV 176
Query: 180 LNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI--YYDPFCPKHLLGCAVNISA 237
L CP+L+ELV+ W+ +VS P+L+ L I ++ P +++
Sbjct: 177 FETLLPRCPLLEELVLEDQRWKQWCG-SVSSPSLKRLRIRFFHIPI---------ISLDV 226
Query: 238 RNLISLHCTSCLTINFSFCDLFSLVDAYI-------DVPSLWPSEGQKVALCAAKLLHGI 290
L+ L + ++ +L SLV+A + ++ L V L+ GI
Sbjct: 227 PGLVYLELSCIFGSKYANVNLDSLVEARLNHWVEEQELRKLRDGSSHLVPADMMDLITGI 286
Query: 291 LRVKSLVLTEHATEVVKFPNRSL 313
+VK L LT A E+ F + L
Sbjct: 287 RKVKVLHLTSDALELFYFSGQEL 309
>AT1G22000.1 | Symbols: | F-box family protein |
chr1:7744189-7747123 FORWARD
Length = 727
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 19/214 (8%)
Query: 12 ISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEM 71
I LP+++L IL +P K+ V TS+LSK+W+Y W P+ +FK+ S+ +
Sbjct: 31 ICALPDDLLLQILPHVPTKEAVATSILSKQWRYVWLMLPKL-------EFKDEGSESVGW 83
Query: 72 SLQRSVHQVLSCDNSDCIEKFRLRLRGS--VIESDVCRWISNAVKRKVQELDISLRLGKR 129
+++S+ Q+ DC+ + G I+ DV +W+ NAV R V++LD +L L
Sbjct: 84 FIKKSL-QLHKAPKLDCL----IVELGPHCPIDVDVRKWVENAVNRDVKDLDFTL-LWSA 137
Query: 130 FP--LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGC 187
P P L+T ++L+ L L + + + P L L L + V++D+ SL L S
Sbjct: 138 APTSFPKSLYTCDTLVCLTLSNQILVDVSSPASLPSLLDLSLHYVVYKDDGSLVRLLSSS 197
Query: 188 PVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
PVL+ L ++ + ++ TV + +L +L YD
Sbjct: 198 PVLKRLSVHSHEDDNLKTFTVKVSSLESLN--YD 229
>AT3G44090.1 | Symbols: | F-box family protein |
chr3:15839123-15840759 FORWARD
Length = 449
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 27/315 (8%)
Query: 5 VTDGMDIISV--LPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAM----- 57
V + M++ S+ LP+++L IL FLP K+ + TSLLSKRW+ + D D
Sbjct: 17 VAEQMNLASMDCLPDDLLVQILYFLPTKEAISTSLLSKRWRTLYSLVHNLDLDDYIFWHH 76
Query: 58 SDDFKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKV 117
D + S ++ S + + + L+ I+ F S+I ++ R+ + V
Sbjct: 77 EDGYNQYFSNDIQKSFEEFMERTLALLGGGHIKTF------SLISDEIYRF-DHVVDSIR 129
Query: 118 QELDISLRLGK--RFPLPHILFTSESLITLKLEMRCAL-HIPRSICFPKLKSLYLSHAVF 174
L +L+ +F P+ +FTS L+ L L R A IP+ P LK L L + F
Sbjct: 130 PWLYYNLQKDSLWQFGFPYKVFTSTKLVKLSLGTRLACPRIPQDTSLPVLKVLLLEYIWF 189
Query: 175 EDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTL--TIYYDPFCPKHLLGCA 232
ED + ++ + CP L++L I+ + +S L+ L TI + + +
Sbjct: 190 EDNQLSDVFLAACPALEDLTIHHMF----RPFLISSKNLKKLSVTINFSYYVDR---STI 242
Query: 233 VNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAK-LLHGIL 291
+ + N++ L+ + C L SL +D+ SL Q K L+ I
Sbjct: 243 LTLDTPNVVDLYYSDFPRPIAPHCHLDSLAKVELDLHSLEDDSRQVQNDADVKNLISEIR 302
Query: 292 RVKSLVLTEHATEVV 306
VK+L LT A E++
Sbjct: 303 NVKTLHLTYSAVELM 317
>AT5G56700.1 | Symbols: | F-box protein-related |
chr5:22941991-22943378 FORWARD
Length = 360
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 47/212 (22%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
M IS L +E+L ILSFLP K+ V TS+ +NN S
Sbjct: 1 MAKISDLSDELLVKILSFLPTKEAVSTSVC-----------------------RNNGS-- 35
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLR-LG 127
C NS S + D+ W+ AV R V+EL ISL
Sbjct: 36 ---------FFGCGCPNS-----------SSTLVMDLKSWVRIAVSRCVRELSISLHDTT 75
Query: 128 KRFPLPHILFTSESLITLKL-EMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
LP L+T +SL+TLKL + L +PR++ P LK+L L + DE SL LL S
Sbjct: 76 AAVSLPSSLYTCKSLVTLKLYGKKVLLDVPRTVFLPSLKTLQLERLRYSDEDSLRLLLSY 135
Query: 187 CPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
CPVL++L I ++ + + V +P+L+ L++
Sbjct: 136 CPVLEDLSIVREDYDNLRALVVIVPSLQRLSL 167
>AT3G59000.2 | Symbols: | F-box family protein |
chr3:21799757-21801536 FORWARD
Length = 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAM----SDDFKNN 64
MD + LP+E+L +ILSFL K+ TSLLSKRW+Y P FD + ++ K
Sbjct: 1 MDRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPE 60
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
R + + S V +VL+ I+KF L+ R V V WISN + R V ELD+ +
Sbjct: 61 RDE-IRQSFMDFVDRVLALQAESPIKKFSLKCRIGVDSDRVDGWISNVLNRGVSELDLLI 119
Query: 125 RLGK-RFPLPHILFTSESLITLK----------------LEMRCALHIPRSIC------F 161
L + R P+ L + + L+ LE+ S+C F
Sbjct: 120 ILERVRLPINDGLEDAMDNVVLRFGHVGKLMNGIRNVEYLELSADTLEVLSLCCESMPVF 179
Query: 162 PKLKSLYLSHAVFEDEKSLNLLFSGCPVLQELVI 195
LKSL + +++ +L CP L+ L+I
Sbjct: 180 KNLKSLAIKSTEGRGWQAMPVLLRNCPHLEFLLI 213
>AT3G59150.1 | Symbols: | F-box family protein |
chr3:21872729-21874422 FORWARD
Length = 509
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 144/319 (45%), Gaps = 31/319 (9%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D+IS LP ++L ILS+L K+ TS+LSKRW S P DFD S K + Q
Sbjct: 47 DVISNLPNDLLCRILSYLSTKEAALTSILSKRWSNLLLSIPILDFDD-SVLLKPQKGQRK 105
Query: 70 EMSLQRSVHQVLS--CDNSDCIEKFRLRLRGSVIESD-VCRWISNAVKRKVQELDISLRL 126
+ + V ++LS + S +++ L+ R +E D V +WI V R + LD+SL +
Sbjct: 106 NVFFKAFVDRLLSQRVETSSHVQRVSLKCRQGGVEPDCVIKWILTTV-RDLGVLDLSLCI 164
Query: 127 G-KRFPLPHILFTSESLITLKLEMRCAL-HIPRSICFPKLKSLYLSHAVFEDEKSLNL-- 182
F LP +F S++L+ L++ L P + P L SL L F D +
Sbjct: 165 DFGIFHLPFNVFRSKTLVKLRIGTMIRLSQFPSDVVSPTLNSLVLDLVEFRDGDKVEFRQ 224
Query: 183 LFSGCPVLQELVIY---CW-YWETVENVTVSLPTLRTLTIYY---DPFCPKHLLGCAVNI 235
+ P LQ L ++ W +W N + S TL++L +Y D PK V+
Sbjct: 225 ILLAFPSLQSLRVHESNKWKFW----NGSASSRTLKSL-VYRSDDDSSAPKP----CVSF 275
Query: 236 SARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLW------PSEGQKVALCAAKLLHG 289
+L+ L + + + SLV+A +D+ P+ V+ L G
Sbjct: 276 DTPSLVYLDYSDMVADKYENLKFDSLVEARLDLHLTAFQIMRKPNNIGIVSGDVTTLFKG 335
Query: 290 ILRVKSLVLTEHATEVVKF 308
I VK L L+ A E + +
Sbjct: 336 IRNVKILCLSPDALEALYY 354
>AT1G48400.1 | Symbols: | F-box family protein |
chr1:17882136-17883855 REVERSE
Length = 513
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 6 TDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNR 65
T D IS LP+E+L ILS LP K TS+LSKRW+ FD + N
Sbjct: 6 TSPRDSISNLPDEILGKILSLLPTKVAASTSVLSKRWRNLLGLVDNLCFDESMVVYPNEE 65
Query: 66 SQ-GMEMSLQRSVHQVLSCDNSDCIEKF---RLRLRGSVIESDVCRWISNAVKRKVQELD 121
+ + V + + ++ I+KF R+ ++ V RWI ++R + E+
Sbjct: 66 EETSGSLRFCDFVDKTFALLSNSHIKKFSLSRVYKYNDDVDGMVRRWIRTVMERGLLEIH 125
Query: 122 ISLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLN 181
+ + L TS +L+ L L RC + + R + FP LKSL L ++ D +
Sbjct: 126 LHATPMSFVAIETKLLTSNTLVKLTLSARCFVEVER-VFFPALKSLSL-FSILGDYTNYI 183
Query: 182 LLFSGCPVLQEL 193
L GCPVL+EL
Sbjct: 184 RLIDGCPVLEEL 195
>AT5G02930.1 | Symbols: | F-box family protein | chr5:682577-684480
FORWARD
Length = 469
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
G+D IS LP+ VL +I S++P + +RTS+LSKRW++ W P F+ + K
Sbjct: 26 GVDSISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHLSFEWLKVSPK----- 80
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD---VCRWISNAVKRKVQELDISL 124
+++ L+ + I+ F L R S E+D V I A+ V +L ++
Sbjct: 81 --------LINKTLASYTASKIKSFHLCTRYSY-EADTHHVNSSIEFAMSHNVDDLSLAF 131
Query: 125 RLGKRF-PLPHILFTSESLITLKLEMRCALHIPR-SICFPKLKSLYLSHAVFEDEKSLNL 182
R F +T+ SL ++E+R +PR + + LK+L L+ DE L +
Sbjct: 132 RRCSPFYNFDDCFYTNSSLK--RVELRYVDLMPRCMVSWTSLKNLSLTDCTMSDESFLEI 189
Query: 183 LFSGCPVLQELVI-YCW---YWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISAR 238
L SGCP+L+ L + +C Y +++ ++ + ++ P ++ ++
Sbjct: 190 L-SGCPILESLSLKFCMSLKYLNLSKSLRLTRLEIERISYIRAPMLSMQIVAPYIHYLRL 248
Query: 239 NLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWP 273
HCT F D+ SL +A +DV + P
Sbjct: 249 RDSEAHCT--------FVDVSSLTEANVDVSTFHP 275
>AT5G25850.1 | Symbols: | F-box family protein |
chr5:9014082-9015917 FORWARD
Length = 481
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 12 ISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDF-DAMSDDFKNNRSQGME 70
+S L + ++ ILS LP+K++V TS+LS RWK W S P + ++ +F RS G
Sbjct: 22 LSQLSDPLICQILSHLPIKEVVTTSVLSTRWKNIWLSVPSLELIYSIFPNFNTFRSFG-- 79
Query: 71 MSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVC---RWISNAVKRKVQELDISLRLG 127
+ CI +L E D C WI+ V R ++ L + G
Sbjct: 80 -------DRFFDSTRVSCIHNLKLYFD----EHDACYLTSWINAFVTRNIRRLYVRRVRG 128
Query: 128 KRF-PLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
F LP L+ E+L++LKL L P + P LK ++L++ F ++ + L S
Sbjct: 129 NYFHELPLSLYVCETLVSLKL-FHLTLVDPEFVSLPCLKIMHLNYVWFPNDATFERLVSS 187
Query: 187 CPVLQELVI 195
CPVL++L I
Sbjct: 188 CPVLEDLKI 196
>AT5G27750.1 | Symbols: | F-box family protein |
chr5:9828430-9829981 FORWARD
Length = 459
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
G D IS LPE ++ IL LP KD V+TS+LS RWK W + P D F++ +
Sbjct: 3 GFDRISELPESLITQILLCLPTKDSVKTSVLSTRWKNLWLNVPGLDLTCSDFPFEDEEYE 62
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELD-ISLRL 126
+ ++ + + L + ++ F + + I R I A+ R ++ LD +S +
Sbjct: 63 QVFINF---IDRFLEFNPESRLQTFEVDYKRREIRGFKDR-IGTAINRGIRLLDAVSSTM 118
Query: 127 GKR-----FP----LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDE 177
+P +P LFTS++L+TLKL AL+ P + P LK + L +
Sbjct: 119 YWEEECIMYPYLEFMPLNLFTSKTLVTLKLR-DSALNDPGLLSMPCLKFMILREVRWSGT 177
Query: 178 KSLNLLFSGCPVLQELVI 195
SL L SGCPVL++L +
Sbjct: 178 MSLEKLVSGCPVLEDLTL 195
>AT4G13965.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G55030.1); Has 1305 Blast hits to 1279
proteins in 17 species: Archae - 0; Bacteria - 4;
Metazoa - 2; Fungi - 4; Plants - 1281; Viruses - 0;
Other Eukaryotes - 14 (source: NCBI BLink). |
chr4:8066138-8067435 REVERSE
Length = 376
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 31/207 (14%)
Query: 113 VKRKVQELDISLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHA 172
+++ V E+D G RF +P L+ E+L TL+L+ + +P SIC L++L+L +
Sbjct: 64 LRKLVLEVD-----GGRFSIPESLYNCETLDTLELKYSILMDVPSSICLKSLRTLHLHYV 118
Query: 173 VFED-EKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGC 231
F+D E +LNLL SGCP L+ LV++ + + +V+ T+++ +L+ LTIY
Sbjct: 119 DFKDNESALNLL-SGCPNLENLVVHRYPFSSVKTYTIAVSSLKRLTIY---------TSS 168
Query: 232 AVNISARNLISLHCTSCLTI--NFSFC---DLFSLVDAYIDVPSLWPSEGQKVALCAAKL 286
V+ A +I+ + L I FC ++ LV+A + V S + L
Sbjct: 169 TVDPRAGYVINSPSLTYLKIVGQIGFCLIENVPELVEASMIVSS---------QIINKNL 219
Query: 287 LHGILRVKSLVLTEHATEVVKFPNRSL 313
L + VK L L E + ++KFP S+
Sbjct: 220 LESLTSVKRLFL-EFSPLMIKFPAGSI 245
>AT3G54160.1 | Symbols: | syntaxin-related family protein |
chr3:20053468-20055027 FORWARD
Length = 434
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 29 MKDIVRT-SLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEMSLQRSVHQVLSCDNSD 87
M +IVR ++SK W S + + + N S S + V ++L+ +S
Sbjct: 1 MSEIVRVQEIVSKLWNLNIASKKSPNLVTIISNVGYNPSFETNGSFKDFVSRLLARRDSY 60
Query: 88 CIEKFRLRLRGSVIESDVCRW------ISNAVKRKVQELDISLRLGKRFPLPHILFTSES 141
I +F L+LR +E D ++ + N + R V +L++ + + + + LP +FT +
Sbjct: 61 RIRRFSLKLRS--LEFDSAKYHLVNECLRNVLNRGVLDLELDINVNEVYKLPFEVFTCKK 118
Query: 142 LITLKLEMRCAL-HIPRSICFPKLKSLYLSHAVFEDEK---SLNLLFSGCPVLQELVIY- 196
++ LKL + +IP++ P LK+L+L F D+ + L S CPVL++LVIY
Sbjct: 119 VVKLKLGSDFVIDNIPKNALLPALKTLFLDKVRFIDKSGGCAFTRLVSACPVLEDLVIYR 178
Query: 197 ----CWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGC---AVNISARNLISLHCTSCL 249
W W + VS L+ LTI + + + L G +++ +L L
Sbjct: 179 NNREDWEWSRI----VSSKILKKLTIRREDW--EDLDGSSYESISFDTPSLEYFEYFDVL 232
Query: 250 TINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGILRVKSLVL 298
+ DL SLV+A +++P + V L+ G+ V+ L L
Sbjct: 233 RDGYPVVDLKSLVEAKLELPLFMVGDTYDV----KNLIKGLENVQILSL 277
>AT5G35995.2 | Symbols: | F-box family protein |
chr5:14136707-14138230 REVERSE
Length = 455
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 10 DIISVLPEEVL-HYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
D IS LP+EVL ILS LP K +V TS+LSKRW+ + +D +D R+
Sbjct: 5 DFISSLPDEVLGKKILSLLPTKLVVSTSVLSKRWRNLFHFVDSFDL----EDSTPIRNAD 60
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
+ +L S+C K RL L +S V RWI +A+KR EL++ +
Sbjct: 61 SFSDFMKDTVALL----SNCPIK-RLTLNSHYEKSSVNRWIRSALKRGCLELNLQSQYDH 115
Query: 129 RFPLPHILFTSESLITLKLE-----MRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
+ I F + +L+ L L +R + + FP LK+L L AV N L
Sbjct: 116 YLDI-GIFFRNNTLVKLTLSSYRTFLRGNVPPEGRVFFPALKTLSLG-AVVAKPALYNWL 173
Query: 184 FSGCPVLQELVI 195
SGCPVL+EL I
Sbjct: 174 ISGCPVLEELFI 185
>AT5G35995.1 | Symbols: | F-box family protein |
chr5:14136707-14138230 REVERSE
Length = 455
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 10 DIISVLPEEVL-HYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
D IS LP+EVL ILS LP K +V TS+LSKRW+ + +D +D R+
Sbjct: 5 DFISSLPDEVLGKKILSLLPTKLVVSTSVLSKRWRNLFHFVDSFDL----EDSTPIRNAD 60
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
+ +L S+C K RL L +S V RWI +A+KR EL++ +
Sbjct: 61 SFSDFMKDTVALL----SNCPIK-RLTLNSHYEKSSVNRWIRSALKRGCLELNLQSQYDH 115
Query: 129 RFPLPHILFTSESLITLKLE-----MRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
+ I F + +L+ L L +R + + FP LK+L L AV N L
Sbjct: 116 YLDI-GIFFRNNTLVKLTLSSYRTFLRGNVPPEGRVFFPALKTLSLG-AVVAKPALYNWL 173
Query: 184 FSGCPVLQELVI 195
SGCPVL+EL I
Sbjct: 174 ISGCPVLEELFI 185
>AT5G02920.1 | Symbols: | ubiquitin-protein ligase |
chr5:680541-681317 FORWARD
Length = 258
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 2 RQHVTDGMDIISVLPEEVLHYILSFLPMKD-IVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
R + D IS LP+E+LH+ILSF+P + ++RTS+LSKRW++ W P F+ +
Sbjct: 20 RPLIRRSSDSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHLSFEWL--- 76
Query: 61 FKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQEL 120
M + +++ L+ + I F L S V I A+ V L
Sbjct: 77 ----------MVSPKLINKTLASYTASKITSFHLCTSYSYEAGHVHSSIEFAMSHNVDNL 126
Query: 121 DISLRLGKRFP----LPHILFTSESLITLKLEMRCALHIPRSIC-FPKLKSLYLSHAVFE 175
++ FP P +TS SL ++E+R A P I + L+ L L+
Sbjct: 127 SLAF---SSFPPCNKFPDFFYTSSSLK--RVELRSASLTPSCIVSWTSLRDLSLTRCNLS 181
Query: 176 DEKSLNLLFSGCPVLQELVI 195
D+ L +L SGCP+L+ L +
Sbjct: 182 DKSFLKIL-SGCPILESLSL 200
>AT5G18780.1 | Symbols: | F-box family protein |
chr5:6264610-6266097 FORWARD
Length = 441
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
G D IS+LPE +L +ILSFL KD VRTS+LS RW+ W PR D D SD +N S
Sbjct: 9 GEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDK-SDFSDDNPSA 67
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIES---DVCRWISNAVKRKVQELDISL 124
V + L+ + F+L V + D C + K K+Q +I
Sbjct: 68 SF-------VDKFLNFRGESYLRGFKLNTDHDVYDISTLDAC--LMRLDKCKIQHFEIEN 118
Query: 125 RLGKRFPL-PHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLL 183
G L P I+ +L++LKL L S+ P L+ ++ +F +KS +L
Sbjct: 119 CFGFCILLMPLIIPMCHTLVSLKLSF-VILSKFGSLSLPCLEIMHFEKVIFPSDKSAEVL 177
Query: 184 FSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
+ PVL++L I + VE + V +L++ T+
Sbjct: 178 IACSPVLRDLRISQSGDDAVEVLRVCSASLKSFTL 212
>AT1G16940.1 | Symbols: | F-box family protein |
chr1:5791983-5793491 FORWARD
Length = 434
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
G +II+ LP+ +L I LP +++V+TSL+ +RW+Y W+S P
Sbjct: 9 GHNIINQLPDSLLCEIFFNLPTEEVVKTSLICRRWRYVWQSLP----------------- 51
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKF----RLRLR----GSVIESDVCRWISNAVKRKVQE 119
G+++ + S + D D +E+F R++LR G + ++N +K K+Q
Sbjct: 52 GLDLVINGSKNY----DKFDFLERFMFLQRVKLRYVGYGHNCRNMTSMMMNNVIKHKIQH 107
Query: 120 LDISLR---LGKRFPLPHILFTS-ESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFE 175
LD+ + R +P ++TS E L+ LKL P S+ P LK + L F
Sbjct: 108 LDVGSNRRYVYDRVEIPPTIYTSCERLVFLKLHRANLPKSPDSVSLPCLKIMDLQKINFV 167
Query: 176 DEKSLNLLFSGCPVLQELVIYCWYWETVEN 205
D + L S CP L+ L + Y V +
Sbjct: 168 DSLDMEKLVSVCPALETLTMDKMYGAKVSS 197
>AT1G13570.1 | Symbols: | F-box family protein |
chr1:4642528-4643930 REVERSE
Length = 416
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 9/208 (4%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LP+ ++ IL+ L ++D +RTS+LS +W+YKW + FD N+R +
Sbjct: 6 DFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPSNDRCV-V 64
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGKR 129
E +L R + VL + I KF+L D+ +W+ + ++EL + L G+
Sbjct: 65 ETNLVRFITGVLLL-HQGPIHKFQLSTSFKQCRPDIDQWLLFLSRNGIKELVLKLGEGE- 122
Query: 130 FPLPHILFTSESLITLKLEMRCALHIPRSI-CFPKLKSLYLSHAVFEDEKSLNLLFSGCP 188
F +P LF L L+L C P+ F LKSL L H + + + L SGCP
Sbjct: 123 FRVPACLFNCLKLTCLEL-CHCEFDPPQYFKGFSYLKSLNL-HQILVAPEVIESLISGCP 180
Query: 189 VLQELVIYCWYWETVENVTVSLPTLRTL 216
+L+ L + Y++++ +++S P L L
Sbjct: 181 LLEFLSL--SYFDSL-VLSISAPNLMYL 205
>AT4G10420.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 11 plant
structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT4G10400.2); Has
664 Blast hits to 644 proteins in 11 species: Archae -
0; Bacteria - 8; Metazoa - 17; Fungi - 0; Plants - 639;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr4:6453085-6454209 REVERSE
Length = 322
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 108 WISNAVKRKVQELDI--SLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLK 165
W+ + R V+EL+I S K+ LP L+T +SL+ LKL + +PR +C P LK
Sbjct: 2 WVVVVLSRYVRELEIYSSCYQDKQNILPSSLYTCKSLVILKLNGGILMDVPRMVCLPSLK 61
Query: 166 SLYLSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIY 219
+L L + ++SL L S CPVL++LV+ + + + V +P+L+ L++Y
Sbjct: 62 TLVLKGVNYFKQESLQRLLSNCPVLEDLVVNLCHHDNMGKFIVIVPSLQRLSLY 115
>AT1G78730.1 | Symbols: | F-box family protein |
chr1:29607840-29609441 REVERSE
Length = 420
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 134/316 (42%), Gaps = 55/316 (17%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
+D + LP+ +L + LP KD+V+TS+LS W W+S P D DF +
Sbjct: 21 LDWLRKLPDSLLCQVFLNLPTKDVVKTSVLSSTWGNIWRSVPGLDLGY--GDFPEYNA-- 76
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRL-----RLR-----GSVIESDVCRWISNAVKRKVQ 118
V L ++ ++ F+L RL+ + ++V RWI+ +KRKV+
Sbjct: 77 ----FVSFVDSFLGFNSESRLQNFKLNYQYLRLKYEWKWTELDNANVTRWINTVIKRKVE 132
Query: 119 ELDISLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEK 178
L +S + F++ P S+ P +K +YL F ++
Sbjct: 133 HLHLS----------DVTFSN----------------PESVSLPCVKVMYLDMVKFANDL 166
Query: 179 SLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLG-CAVNISA 237
+ +L SGCPVL+ L I + V+ + V +L + T+ C + ++ V I A
Sbjct: 167 AFEMLISGCPVLESLTIKRSACDNVDYLRVCSQSLLSFTLV--GHCNEDMVKEQVVAIDA 224
Query: 238 RNLISLHCTSCLTINFSFCDLFSLVDAYIDV-------PSLWPSEGQKVALCAAKLLHGI 290
L L T +F + SLV ID+ P++ K + LL GI
Sbjct: 225 PRLEDLKLYCHETASFIIKNPASLVKMDIDIMFNLSSEQKFDPNDLPKRNMIRNFLL-GI 283
Query: 291 LRVKSLVLTEHATEVV 306
VK + ++ H EV+
Sbjct: 284 SGVKEMEISSHTLEVI 299
>AT1G64540.1 | Symbols: | F-box family protein |
chr1:23966909-23968425 FORWARD
Length = 444
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 28/193 (14%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDF--KNNRSQ 67
+ IS LP+E+L ILS LP K V TS+LSKRW+ + + D+F +++ +
Sbjct: 5 EFISNLPDEILGKILSLLPTKLGVSTSVLSKRWR---------NLILLVDNFDLEDSSTS 55
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIE-SDVCRWISNAVKRKVQELDISLRL 126
G L+++V ++ +C RL L G S WIS A +R EL + +
Sbjct: 56 GFSAFLEQTVARLNTCPIK------RLSLNGRHYRFSSADSWISTAFERGCLELHLQSQY 109
Query: 127 GKRFPLPHILFTSESLITLKLEMRCALH--IPR--SICFPKLKSLYLSHAVFEDEKSLNL 182
L + +S +L+ L L + L +P ++ FP LK+L L AV D
Sbjct: 110 -----LDTGILSSNTLVKLTLSDQIYLQGLVPHDGTVFFPALKTLSLG-AVVADRDVYES 163
Query: 183 LFSGCPVLQELVI 195
L SGCPVL EL I
Sbjct: 164 LISGCPVLDELSI 176
>AT3G56780.1 | Symbols: | F-box family protein |
chr3:21031613-21033202 FORWARD
Length = 431
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 12 ISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEM 71
I+ LP++++ ILSF+ K +V TSLLSK+WK W P +D
Sbjct: 9 INELPDDLILKILSFVSTKHVVVTSLLSKKWKSLWTRVPILKYDVRD-----------HT 57
Query: 72 SLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKR---KVQELDISLRLGK 128
+R + + L S +E + L ++ D+ WI A+ ++EL+I +
Sbjct: 58 RFERFLDKSLFSHQSHVLESLHVELSVTLWNKDIGPWIRTALHHHHCHLRELEIDACIVH 117
Query: 129 RFPLPHILFTSESLITLKLE-MRCALHIP-RSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
LP LFT ++L+ LKL+ + + P ++ P LK+L++ H+ D SL +L S
Sbjct: 118 TV-LPPELFTCKTLVVLKLKGIVIDVEAPLTTVSLPSLKTLHIDHSSLFDFGSLQMLLSN 176
Query: 187 CPVLQELVI 195
C + +L++
Sbjct: 177 CNFITDLMV 185
>AT5G44950.1 | Symbols: | F-box family protein |
chr5:18151665-18153164 FORWARD
Length = 438
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 32/228 (14%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPR-----YDFDAMSDDFK 62
G D IS LP+ +L++IL +L +++ +RTS+LS RW+ W P +DF A + F+
Sbjct: 2 GRDRISELPDGLLNHILMYLHIEESIRTSVLSSRWRKLWLKVPGLDVNVHDFPADGNLFE 61
Query: 63 NNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSV--IESDVCRWISNAVKRKVQEL 120
+ + +E++ R ++ F+L ++ + WI+ V R +Q L
Sbjct: 62 SLMDKFLEVNRGR-------------LQNFKLNYESNLYYLMDRFVPWIATVVDRGIQHL 108
Query: 121 DISLRLGKRFP------LPHILFTSESLITLKLEMRCALHIPR-SICFPKLKSLYLSHAV 173
D++ P +P + S++L++LKL + L P+ + P LK ++L
Sbjct: 109 DVT---ATDCPPWTIDFMPANICKSKTLVSLKL-VNVGLDTPKFVVSLPCLKIMHLEDIF 164
Query: 174 FEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
+ + NL+ SGCPVL++L I + + + + V TL+ + +D
Sbjct: 165 YSPLIAENLI-SGCPVLEDLTIVRNHEDFLNFLRVMSQTLKNFRLTFD 211
>AT2G26030.3 | Symbols: | F-box family protein |
chr2:11091505-11093000 REVERSE
Length = 442
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D I LP+ +L +LS+LP D V+TS+LSKRW++ W P D DF +
Sbjct: 4 DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKV--SDFPDENYASF 61
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD-VCRWISNAVKRKVQELD---ISLR 125
+ L + + KF+L+ + D + W+ V R +Q LD
Sbjct: 62 -------IDNFLEFNRKSRMRKFKLKYDEYTYDDDRLAGWVVTTVDRGIQHLDAKGFETN 114
Query: 126 LGKRFPLPHILFTSESLITLKLEMRCALHIPR-SICFPKLKSLYLSHA-VFEDEKSLNLL 183
+ R +P ++ +L++L L + + P + P LK ++L ++D + +
Sbjct: 115 MCVREFMPQNIYKCNTLVSLML-VTVGIENPEFVVSLPSLKIMHLEDVWYYDDPLIMEKI 173
Query: 184 FSGCPVLQELVI 195
SGCPVL++ V+
Sbjct: 174 ISGCPVLEDFVL 185
>AT2G26030.1 | Symbols: | F-box family protein |
chr2:11091505-11093000 REVERSE
Length = 442
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D I LP+ +L +LS+LP D V+TS+LSKRW++ W P D DF +
Sbjct: 4 DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKV--SDFPDENYASF 61
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD-VCRWISNAVKRKVQELD---ISLR 125
+ L + + KF+L+ + D + W+ V R +Q LD
Sbjct: 62 -------IDNFLEFNRKSRMRKFKLKYDEYTYDDDRLAGWVVTTVDRGIQHLDAKGFETN 114
Query: 126 LGKRFPLPHILFTSESLITLKLEMRCALHIPR-SICFPKLKSLYLSHA-VFEDEKSLNLL 183
+ R +P ++ +L++L L + + P + P LK ++L ++D + +
Sbjct: 115 MCVREFMPQNIYKCNTLVSLML-VTVGIENPEFVVSLPSLKIMHLEDVWYYDDPLIMEKI 173
Query: 184 FSGCPVLQELVI 195
SGCPVL++ V+
Sbjct: 174 ISGCPVLEDFVL 185
>AT5G41830.1 | Symbols: | F-box family protein-related |
chr5:16743762-16745334 REVERSE
Length = 463
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 20/243 (8%)
Query: 81 LSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGKRF-------PLP 133
L + + + +F ++ G V ++ V WI +KR V ++D+ + + F PLP
Sbjct: 38 LQAEANATLNRFYVKCEG-VDQNSVLEWIPKVLKRGVLDIDLHIPSSRGFGSNSTFYPLP 96
Query: 134 HILFTSESLITLKLEMRCALHIPRS--ICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVLQ 191
+F S++L+ LK++ + +++ + P LK+L+L + V D + L SGC +L+
Sbjct: 97 SEIFVSKTLVRLKIQFQDGVNVNVECDVSLPMLKTLHLDY-VKMDTRMFQKLLSGCHMLK 155
Query: 192 ELVIYCWYWETVEN-----VTVSLPTLRTLTI-YYDPFCPKHLLGCAV--NISARNLISL 243
EL++ WE VTVS+PTL+ L ++ F V + NL+ L
Sbjct: 156 ELLLMNLIWEESSEPEPCYVTVSVPTLKILKFSRFENFVKAKDFKPIVLWSFDIPNLVYL 215
Query: 244 HCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGILRVKSLVLTEHAT 303
+ + SLV+A + + + + KL GI VK L LTE A
Sbjct: 216 EYLDTIADKYQHVRFDSLVEARLGLCKT-SKQIKNDNNNVTKLFMGICNVKILYLTEDAL 274
Query: 304 EVV 306
+V+
Sbjct: 275 KVL 277
>AT5G35926.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD-like (InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT5G41840.1). |
chr5:14062676-14065597 FORWARD
Length = 368
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 24/196 (12%)
Query: 131 PLPHILFTSESLITLKLEMR--CALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCP 188
PLP +F S++L+ LK++ + ++ + R + PKLK+L+L + E K N L SGC
Sbjct: 50 PLPSKIFESKALVWLKIQFQDGVSIDVKRGVSLPKLKTLHLDYFKIEPSK-FNKLLSGCH 108
Query: 189 VLQELVIYCWYWETVEN-----VTVSLPTLRTLTI------------YYDPFCPKHL-LG 230
L+ELV+ W VTVS+PTL+ L Y+ + +++ G
Sbjct: 109 ALEELVLINLMWADSSGYKVCPVTVSIPTLKRLKFCRSEDFYEGKFHEYEDYDEENIKKG 168
Query: 231 CAVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGI 290
+++ NL+ L + + + SLV+A + L ++ + + KLL G+
Sbjct: 169 VSLSFDNPNLVYLEYSDVIVDKYKQVRFDSLVEANL---GLRKNQAEPDKINVTKLLMGL 225
Query: 291 LRVKSLVLTEHATEVV 306
VK L L+ EV+
Sbjct: 226 HNVKILYLSNDILEVL 241
>AT5G38386.1 | Symbols: | F-box family protein |
chr5:15363178-15364815 FORWARD
Length = 403
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 44/217 (20%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPR---YDFDAMSDDFKNNR 65
MD +S LP+E+L +I+SFL K+ S+LSKRW+ P +D D + + +
Sbjct: 1 MDHLSNLPDELLCHIMSFLTTKEAALISVLSKRWRNLIAFVPNLDIFDCDILHWEVRKEE 60
Query: 66 SQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLR 125
+ V +VL+ + ++KF L G V WI N + R V ELD+S+
Sbjct: 61 RDDIRQLFMDFVDRVLALQGNSPLKKFSLCCGGGSYSDRVDCWIQNVMVRGVSELDLSMI 120
Query: 126 LGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEK-SLNLLF 184
+ + +P+ VFE++K + +
Sbjct: 121 FDTSYHM----------------------------YPQ---------VFENKKLNFEIFL 143
Query: 185 SGCPVLQELVIYCWYWETVE---NVTVSLPTLRTLTI 218
P L+ELV+ YW+ ++ +V+VS +L+TLTI
Sbjct: 144 RALPALEELVMNHIYWKELDVNVHVSVSSASLKTLTI 180
>AT3G62440.1 | Symbols: | F-box family protein |
chr3:23096104-23097726 REVERSE
Length = 457
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 142/320 (44%), Gaps = 42/320 (13%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD IS LP+E++ +I SFL ++ T++LSKRW + P FD+ D +
Sbjct: 1 MDRISNLPDEIICHIGSFLSAREAAFTTVLSKRWHNLFTIVPDLHFDSSVKDGE------ 54
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLR------LRGSVIESD-------------VCRWI 109
SL V +V++ S + K L+ + + D + R +
Sbjct: 55 ---SLTDFVDRVMALPASSRVNKLSLKWWFDEDTDSAQFDEDTEPEDTEPAQFDQINRSL 111
Query: 110 SNAVKRKVQELDISLRLGKRFPLPHILFTSESLITLKLEMRCALH-IPRSICFPKLKSLY 168
+KR V + + + + + LP +FT E++ L L A+ +P + P LK+L
Sbjct: 112 RVVLKRGVADFYLWVHGKQGYTLPFEVFTCETVTKLSLGSGFAIDFLPENALLPALKTLS 171
Query: 169 LSHAVFEDEK--SLNLLFSGCPVLQELVIYCWYWETVE-NVTVSLPTLRTLTIY---YDP 222
L H F + + L + PVL+EL + WE + + TVS +L+ LTI +D
Sbjct: 172 LYHVRFYEFGRCAFKTLLASSPVLEELTVCGVNWELWKWSRTVSSSSLKRLTIMRKQWDA 231
Query: 223 FCPKHLLGCAVNISARNLISLHCTSCLTINFSFCDLFSLVDAYI----DVPSLWPSEGQK 278
F +++ +L L+ + + + +L SLV+ + + +W +G +
Sbjct: 232 FDDSDFK--SISFDTPSLAYLYYSDYVPKEYLSVNLDSLVETKLYLCPEENYMW-GKGDE 288
Query: 279 VALCAAKLLHGILRVKSLVL 298
LLHG+ V++L L
Sbjct: 289 KRFNPINLLHGLKNVETLNL 308
>AT1G80470.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), Cyclin-like F-box
(InterPro:IPR001810), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G16930.1); Has 1270 Blast hits to 1243
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 1270; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr1:30256185-30257916 FORWARD
Length = 481
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS L +++L ILS +P ++ V TS +SKRW+ W+ P D D S F +
Sbjct: 32 DWISGLADDLLLQILSKVPTRESVFTSRMSKRWRNLWRHVPALDLD--SSKFPH------ 83
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFR-LRLRGSVIESDVCRWISNAVKRKVQELDISLRLG- 127
E L+ L D + IE+F+ + + + I + VKR +++L I ++
Sbjct: 84 ESDLEDFFDSFLQFDGNLKIERFKWIYNVEEHCDPEFVSRIDHVVKRGLKDLTILSKVNI 143
Query: 128 --KRFPLPHILFTSESLITLKLEMRCALHIPRS--ICFPKLKSLYLSHAVFEDEKSLNLL 183
+P L++ +L+ L L PR+ + P LK+++L F+ E L L
Sbjct: 144 EDDSVRMPVSLYSCATLVNLTL-YSVVFDAPRAQLVSLPCLKTMHLEAVKFDGETILGTL 202
Query: 184 FSGCPVLQELVIYCWYWETVENVTVSLPTLR 214
S C L EL I + + +V+V P+LR
Sbjct: 203 ISSCSFLDELTIITHDHDELGDVSVRSPSLR 233
>AT1G32020.1 | Symbols: | F-box family protein |
chr1:11512552-11513067 REVERSE
Length = 171
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 81/148 (54%), Gaps = 12/148 (8%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LP+ ++ I+S+L +KD ++TS+LSKRW++ W + D KN
Sbjct: 4 DRISTLPDHLVAKIVSYLGIKDSIKTSVLSKRWEFVW-------LKVVGLDLKNCDFPPN 56
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVI-ESDVCRWISNAVKRKVQELDISLR--- 125
++ Q V++ + ++ ++ F++ G+ + + WI+ AV R VQ LD +
Sbjct: 57 GIASQMVVNKYMEFNSGLHMQYFKVNFGGNTVCTNRFLEWIATAVDRGVQHLDAENKNPV 116
Query: 126 LGKRFPLPHILFTSESLITLKLEMRCAL 153
+ K F +P ++ S++L++LKL ++ L
Sbjct: 117 IIKEF-MPKKIYKSKTLVSLKLAIKIFL 143
>AT4G10410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: F-box family protein
(TAIR:AT4G10400.2); Has 667 Blast hits to 646 proteins
in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr4:6448983-6449998 REVERSE
Length = 263
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 24 LSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEMSLQRSVHQVLSC 83
+S P K V TS+LSKRW++ W + +F D+ S+ SLQ + + L
Sbjct: 1 MSLAPTKVAVSTSILSKRWEFLWMWLTKLEF---GDEL---YSESEFKSLQCFLDRNLPL 54
Query: 84 DNSDCIEKFRLRLRGSVIE-SDVCRWISNAVKRKVQELDISLRLGKRFPLPHILFTSESL 142
+ IE FRL L G D+ W+ V R V+EL+I K+ LP L+T +SL
Sbjct: 55 HRAPVIESFRLELSGLYFNPEDIRMWVVVVVSRYVRELEIYCP-EKQHILPSSLYTCKSL 113
Query: 143 ITLKLEMRCALHIPRSICFPKLKSLYL 169
+ LKL+ L +P +C P L++L L
Sbjct: 114 VILKLDGGIILDVPPMVCLPSLRTLEL 140
>AT1G61330.1 | Symbols: | F-box family protein |
chr1:22622975-22624527 FORWARD
Length = 447
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 1 MRQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
M + M +I L +E++ ILSFLP++ ++ +LSKR++ WK + DF +
Sbjct: 1 MSEASNKQMKLIKRLSDELVECILSFLPVQSTLQHRVLSKRYRDTWKLSRDLDFSGI--- 57
Query: 61 FKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQEL 120
F RSQ + R + V I++F L L + +E + W+ +++ ++EL
Sbjct: 58 FSVRRSQSEAV---RIIEDVFIQHQGPEIDRFVLSLDHTGVEDKILSWVDTCLRKNIKEL 114
Query: 121 DISLRLGKR-FPLPHILFTSESLITLKLEMRCALHIPRSICFPK----LKSLYLSHAVFE 175
+ K+ +P +SE+L LKL+ C IP ++ PK LK+L L
Sbjct: 115 VLDFSSSKKVMEIPLNFSSSETLTVLKLQW-CRFEIPNNL--PKGLRLLKTLSLMRTEVT 171
Query: 176 DEKSLNLLFSGCPVLQEL 193
+E ++ +F+ C L+ L
Sbjct: 172 NE-MIDSIFNNCIHLESL 188
>AT1G56610.2 | Symbols: | syntaxin-related family protein |
chr1:21212378-21213960 FORWARD
Length = 472
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 27/267 (10%)
Query: 15 LPEEVLHYILSFLPMKDIVRTSLL-SKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEMSL 73
LP+ + +ILS+LP K V SLL K W W+S + + ++ F +++ E
Sbjct: 15 LPKCLAPHILSWLPTKTAVTVSLLFMKGW---WRSEMK-NLSSLKFSFSDDQE---EEHF 67
Query: 74 QRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL-RLGKRFPL 132
R V QVL + ++ F L L + V + + V++L +S+ + F L
Sbjct: 68 VRFVDQVLRQRGNRKLDSFSLTLNDEIDGGFVTHLVDYPLDNGVEKLKLSIYDIKGNFQL 127
Query: 133 PHILFTSESLITLKLEMRCAL-----HIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGC 187
+F+ +L+TLKL +L + P LK+L+L + D K L S C
Sbjct: 128 SSRVFSQATLVTLKLATNRSLIWINGDDVAAAHLPCLKTLWLDDVLVADVKVFVRLLSRC 187
Query: 188 PVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPF--------CPKHLLGCAVNISARN 239
P+L+ELV+ W E V +LR L I + + CP+ +L N
Sbjct: 188 PILEELVMIDMKWHNWEACFVVSASLRRLKIVWTDYVEMDEYDRCPQSVL-----FDTPN 242
Query: 240 LISLHCTSCLTINFSFCDLFSLVDAYI 266
++ L T + + SL++A I
Sbjct: 243 VLYLEYTDHIAGQYPLLKFSSLIEAKI 269
>AT5G15620.1 | Symbols: | F-box family protein |
chr5:5082465-5083991 FORWARD
Length = 440
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 30/274 (10%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD S LP++V+++I+SFL K+ +SK +F + +N
Sbjct: 1 MDRFSNLPDDVIYHIVSFLSAKEATCLKFVSK------------NFQNLVTIKRNVVFHH 48
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRW------ISNAVKRKVQELDI 122
E S + V +L+ S I++F L+L + D ++ + N +KR V +L++
Sbjct: 49 WE-SFKNFVDGLLAEPASYRIKRFSLKL----VSMDFAQYNIVNDCLCNVLKRGVLDLEL 103
Query: 123 SLRLGKRFPLPHILFTSESLITLKLEMRCALHI-PRSICFPKLKSLYLSHAVF--EDEKS 179
+ + + + LP +FT ++++ LKL + I P++ P LK+L L F D +
Sbjct: 104 DINVKEDYILPSDVFTCKTVVRLKLGCGFVIDILPKNALLPALKTLILDSVRFYASDGCA 163
Query: 180 LNLLFSGCPVLQELVIYCWYWETVENVT-VSLPTLRTLTIYYDPFCPKHLLGC---AVNI 235
L S PVL+ELVI WE + VS PTL+ LT+ + P+ +V+
Sbjct: 164 FTRLLSASPVLEELVIDRLNWEHWKGSRFVSSPTLKRLTLRRKEWEPEPETWTDFESVSF 223
Query: 236 SARNLISLHCTSCLTINFSFCDLFSLVDAYIDVP 269
+L L + + +L S+V+A + +P
Sbjct: 224 DTPSLAYLKYKDVIPYGYPIVNLNSIVEARLTLP 257
>AT5G38570.1 | Symbols: | F-box family protein |
chr5:15449279-15450601 REVERSE
Length = 379
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 48/264 (18%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD I+ LP+++L ILSF+P V T +LSKRW++ W P +F + D +R
Sbjct: 1 MDNINGLPDDLLVKILSFVPTYVAVSTCVLSKRWEFLWMWLPNLEFVSPWD----SRPGI 56
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGS--VIESDVCRWISNAVKRKVQELDISLRL 126
++ +++ L + IE+ + + + + + RWI AV V+EL I
Sbjct: 57 VDF-----INKKLPIHRAPVIERLCIHINSNPHIKPEYIKRWIEIAVSHYVRELQID--- 108
Query: 127 GKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
+ S++ ITL+LE + + F D K L L SG
Sbjct: 109 ----------YHSKTKITLQLE---------------------AESYFIDGKYLQQLISG 137
Query: 187 CPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARNLISLHCT 246
CPVL++L + + + TV +P+L++L+++ F +L ++ + + L
Sbjct: 138 CPVLEDLSLRFCCNDNLREFTVIIPSLQSLSLFL--FGNSNLNRYKIDTPSLKYLKLEDW 195
Query: 247 SCLTINFSFCDLFSLVDAYIDVPS 270
+ ++S+ ++ L +AY+DV S
Sbjct: 196 NDPE-HYSWTNMPKLREAYVDVES 218
>AT3G44080.1 | Symbols: | F-box family protein |
chr3:15835632-15837126 REVERSE
Length = 387
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 118/255 (46%), Gaps = 26/255 (10%)
Query: 15 LPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAM----SDDFKNNRSQGME 70
LP+E+L ILS L K V TSLLSKRWK + D D +D + ++
Sbjct: 12 LPDELLVEILSSLTTKQAVSTSLLSKRWKTLYSLVHNLDIDDYILFHREDGYHRYRPDIQ 71
Query: 71 MSLQRSVHQVLSCDNSDCIEKFRLRLR---GSVIESDVC-RWISNAVKRKVQELDISLRL 126
S + V + L+ I+ F L+ R + DV RWI NA++R V EL + +
Sbjct: 72 KSFEDFVERTLAFRGH--IKTFSLKSRELYAFGLGVDVVNRWICNALERGVSELHLC--I 127
Query: 127 GKRFPLPHILFTSESLITLKL--EMRCALHIPRSICFPKLKSLYLSHAVFED--EKSLNL 182
+F LP+ FTS +L+ L L + C+ IP P LK L+L F+D ++L
Sbjct: 128 NSQFELPYKFFTSTTLVMLSLGRGLVCS-KIPPETSLPVLKILFLYSIWFKDLTRHVVDL 186
Query: 183 LFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISA-RNLI 241
+S P + +C + +++ VT+ L LR Y ++ IS RN+
Sbjct: 187 YYSDLP--RRKAPHC-HLDSLAKVTLDLHYLR-----YGYQKVQNYANVKNIISEIRNVK 238
Query: 242 SLHCTSCLTINFSFC 256
+LH TS S C
Sbjct: 239 TLHLTSSAVEVISVC 253
>AT1G56610.1 | Symbols: | syntaxin-related family protein |
chr1:21212189-21213960 FORWARD
Length = 535
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 27/267 (10%)
Query: 15 LPEEVLHYILSFLPMKDIVRTSLL-SKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEMSL 73
LP+ + +ILS+LP K V SLL K W W+S + + ++ F +++ E
Sbjct: 78 LPKCLAPHILSWLPTKTAVTVSLLFMKGW---WRSEMK-NLSSLKFSFSDDQE---EEHF 130
Query: 74 QRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL-RLGKRFPL 132
R V QVL + ++ F L L + V + + V++L +S+ + F L
Sbjct: 131 VRFVDQVLRQRGNRKLDSFSLTLNDEIDGGFVTHLVDYPLDNGVEKLKLSIYDIKGNFQL 190
Query: 133 PHILFTSESLITLKLEMRCAL-----HIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGC 187
+F+ +L+TLKL +L + P LK+L+L + D K L S C
Sbjct: 191 SSRVFSQATLVTLKLATNRSLIWINGDDVAAAHLPCLKTLWLDDVLVADVKVFVRLLSRC 250
Query: 188 PVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPF--------CPKHLLGCAVNISARN 239
P+L+ELV+ W E V +LR L I + + CP+ +L N
Sbjct: 251 PILEELVMIDMKWHNWEACFVVSASLRRLKIVWTDYVEMDEYDRCPQSVL-----FDTPN 305
Query: 240 LISLHCTSCLTINFSFCDLFSLVDAYI 266
++ L T + + SL++A I
Sbjct: 306 VLYLEYTDHIAGQYPLLKFSSLIEAKI 332
>AT5G18770.1 | Symbols: | F-box family protein |
chr5:6261426-6263172 FORWARD
Length = 481
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 14/193 (7%)
Query: 8 GMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
G D+IS LP+ +L +IL FL + V TS+LS RW+ WK PR D + + N+
Sbjct: 22 GEDMISALPDHLLCHILIFLSTDESVLTSVLSSRWRNLWKWVPRLDLNTSDFPYPND--- 78
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRW---ISNAVKR-KVQELDIS 123
++ + + L+ N + +F+LR+ + S+V + + +K+ V+ +
Sbjct: 79 ---VTCAAFIDKFLNLYNESYLREFKLRIDQANFRSNVSLYEPCLGVVIKKPNVRHFQVE 135
Query: 124 LRLGKRFPLPHILFT---SESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSL 180
L + + I T ++L+ LKL + L+ S+ P LK +YL VF + +
Sbjct: 136 SDLLEHWCTSEIRLTLSACQALVCLKLHL-VWLNDFESLSLPCLKIMYLEDVVFPSDAAA 194
Query: 181 NLLFSGCPVLQEL 193
L S PVL++L
Sbjct: 195 ETLISCSPVLEDL 207
>AT3G26930.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: sperm cell;
CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),
FBD-like (InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G13965.1); Has 678
Blast hits to 661 proteins in 16 species: Archae - 0;
Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 651;
Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
| chr3:9925931-9927351 FORWARD
Length = 409
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 120/280 (42%), Gaps = 22/280 (7%)
Query: 36 SLLSKRWKYKWKSNPRYDFDA-MSDDFKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRL 94
S+LSKRW+ WK PR FD M D N + S +S+H V+ D F
Sbjct: 2 SVLSKRWRSLWKMLPRLKFDDWMFPDNVNRCLLSHQASFLQSLHLVIDYD-------FVS 54
Query: 95 RLRGSVIESDVCRWISNAVKRKVQELDISLR-LGKRFPLPHILFTSESLITLKLEMRCAL 153
+ ++ + A R ++EL + + + F P L ESL TL L +
Sbjct: 55 HMHTGIL-------MGIAFGRHIRELVLYVNGFQESFTFPLSLCNCESLETLTLGHNVLI 107
Query: 154 HIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTL 213
+P + L++L+L + D++S+ L SGC L+ LV++ V T+++P+L
Sbjct: 108 DVPSPVFLKSLRTLHLDGVEYTDDESVVNLLSGCISLENLVVHRVIQADVTTFTIAVPSL 167
Query: 214 RTLTIYYDPFCPKHLLGCAVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWP 273
+ LT+ + + + S + L L + L N SL D + V
Sbjct: 168 KRLTLTTEFDDDEDSVYVINAPSLKYLKILGDKAYLIENSPELVEVSLTDRQVTV----- 222
Query: 274 SEGQKVALCAAKLLHGILRVKSLVLTEHATEVVKFPNRSL 313
+G +A LL + VK + L + +KFP S+
Sbjct: 223 -DGYPIASYVENLLRSLTSVKRMSLKISSYLEIKFPTGSI 261
>AT5G56570.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), Cyclin-like F-box
(InterPro:IPR001810), FBD-like (InterPro:IPR006566);
BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT5G56560.1); Has 445 Blast hits to 429
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 4; Plants - 440; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink). |
chr5:22902736-22904404 FORWARD
Length = 439
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 12 ISVLPEEVLHYILSFLPM-KDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGME 70
+S +P++++ I SFLP K+ + T +S+ K W +P FD + ++
Sbjct: 38 LSDMPDDLIFKIFSFLPFFKEDLATRFISEYGKGLWNPDPNAIFD----------DESLD 87
Query: 71 MSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGKRF 130
M+ V+ L ++ ++ L+LR I SD+ + V R ++EL I GK
Sbjct: 88 MTCMSFVYGSLMSKDAQILDSLHLKLRKYYIASDINFLVQLGVNRSMRELRIDF-FGKTL 146
Query: 131 PLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVL 190
LP L T +L L L+ + +P P +++L LS +V + L C V
Sbjct: 147 ELPCCLSTCTTLKVLVLDHLNIMSVPGWFRLPSVETLQLS-SVTGGSNYVPSLIRLCSVH 205
Query: 191 QELVIYCWYWETVENVTVSLPTLRTLTI 218
+ LV+ + + N+ V PTLR+L+I
Sbjct: 206 ERLVVDQNRNKDLVNINV--PTLRSLSI 231
>AT5G56390.1 | Symbols: | F-box family protein |
chr5:22842790-22844273 REVERSE
Length = 428
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 19/220 (8%)
Query: 9 MDIISVLPEEVLHYILSFLP-MKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQ 67
MD IS L +E+L ILS LP KD+V T +LSKRW+Y W P +D D R
Sbjct: 1 MDKISQLHDELLLGILSLLPNAKDVVATMVLSKRWRYLWMMVPSLVYDDSYQDIDYGR-- 58
Query: 68 GMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQEL-----DI 122
R V + L+ + I+ +L D I A K V++L D
Sbjct: 59 -----FSRFVDRSLALHKAPVIDTLHFKLGHICGSGDTL--IGAAEKCCVRKLIIKIDDT 111
Query: 123 SLRLGK--RFPLPHILFTSESLI--TLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEK 178
S R K + LP L + ++ LKL+ + + + FP LK L L + +
Sbjct: 112 SSRSSKTDQVILPMSLCSGVHIMLADLKLQNVVLVDVSTPVSFPSLKRLRLKSVKYPGNE 171
Query: 179 SLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI 218
+N L S CPVL++LV+ + V +TV +P+L+ L++
Sbjct: 172 FVNNLISSCPVLEDLVVKQCSDDNVTILTVRVPSLKRLSL 211
>AT1G50980.1 | Symbols: | F-box family protein |
chr1:18900541-18902057 REVERSE
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 33/168 (19%)
Query: 2 RQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDF 61
++++ + IS P++VL ILS LP KD+V T +LSKRW+ WK D
Sbjct: 24 QENMEKKIRTISEFPDKVLLKILSLLPSKDVVATGVLSKRWRSLWK------------DV 71
Query: 62 KNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELD 121
K R+ +E +L++ S D+ ++ AV R ++EL
Sbjct: 72 KTFRTSS--------------------VESLQLKINPSATNKDIQSLVNMAVARSMRELR 111
Query: 122 ISLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYL 169
I + + K F LP + L T+ L+ + P + P LK L+L
Sbjct: 112 IEM-ICKNFELPKSFYMFSQLETVILDKVSLMDPPPDVHLPCLKRLHL 158
>AT1G67390.1 | Symbols: | F-box family protein |
chr1:25244690-25247139 FORWARD
Length = 479
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 48/219 (21%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D IS LP++VL IL+ L +D ++TS+LS RWK WK P FD +S +++ +
Sbjct: 41 DRISKLPDDVLVMILASLSTEDALKTSVLSTRWKNVWKQVPYLHFDLLSATYESGLIAAL 100
Query: 70 EMSLQRSVHQVLSCDNSD----CIEKFRLRLRGSVIESDVCRWIS-NAVKRKVQELDISL 124
S+ S+ QV++ N I F V+E+ WI +++ + L +
Sbjct: 101 SNSVAESITQVINNHNGHLMGCSIHHFAHHCVNGVLEN----WIRLLTLEKNTRFLSLCN 156
Query: 125 RLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYL-------SHAVFEDE 177
+LGK + F+ P + PKL +L+L +HA E E
Sbjct: 157 KLGKGRRTNVLRFS-----------------PNTFSHPKLATLFLRRYDLVTAHAFKECE 199
Query: 178 K--------------SLNLLFSGCPVLQELVIYC-WYWE 201
N + + CP L+ LV+ C WY E
Sbjct: 200 NLKILKLEGILAEVDVFNTVIASCPSLKVLVLNCMWYNE 238
>AT1G66640.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G66320.1); Has 584 Blast hits to 578
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 584; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr1:24857438-24859011 FORWARD
Length = 416
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 26/226 (11%)
Query: 42 WKYKWKSNPRYDFDAMSDDFKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRL----- 96
W++ WK PR D D DF +L + LS + + KF+LR+
Sbjct: 36 WRHLWKYVPRLDLDEA--DFTQFD------TLVSFIDSFLSVNRESSLNKFKLRIYCNHD 87
Query: 97 -RGSVIESDVCRWISNAVKRKVQELDISLRLGKRFPLPHILFTSESLITLKLEMRCALHI 155
+ + RWIS ++ VQ +D R +P IL+ ESL+TL+L C + +
Sbjct: 88 RDKETNNAHMARWISAIFEQNVQHVD---RTWLPVEVPPILYLCESLVTLRL---CGVVL 141
Query: 156 P--RSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTL 213
+ P +K L L +F +E +L L SGC VL+ L + V + V +L
Sbjct: 142 ANLEFMYLPLVKVLALEWVIFANELALEKLISGCLVLESLSFCKCSLDNVNVLRVRSQSL 201
Query: 214 RTLTIYYDPFCPK-HLLGCAVNISARNL--ISLHCTSCLTINFSFC 256
+ YY P H V I A L + L + + + F+FC
Sbjct: 202 LSFN-YYGPSSRDLHFKDLVVTIDAPKLEILKLSHQANIKVEFNFC 246
>AT1G49610.1 | Symbols: | F-box family protein |
chr1:18361679-18363192 REVERSE
Length = 354
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 53/250 (21%)
Query: 3 QHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFD---AMSD 59
+H + +D IS LP+ +L LS +P K +RTS+LSKRW++ W P DFD +
Sbjct: 19 KHCLEDVDSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDFDDCYKLDV 78
Query: 60 DFKNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQE 119
DF + + L+ + I F L + + + WI A+ R V+
Sbjct: 79 DF---------------IDKTLALYRARKIMTFDLWITNGINLPYIDGWIKFAMSRNVEN 123
Query: 120 LDISLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKS 179
L +S + + +P L+ + S+ L S
Sbjct: 124 LFLSFDF-RLYDVPDYLYINSSVKQL---------------------------------S 149
Query: 180 LNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGCAVNISARN 239
+ + SGCP+++ L ++ V ++T S P+L+ L I+ + + C++ N
Sbjct: 150 IAKILSGCPIIESLTLHFCDQLMVLDLTKS-PSLKILEIHGSIWAKVDICFCSLKEIKAN 208
Query: 240 LISLHCTSCL 249
+ CL
Sbjct: 209 FLLDTVLKCL 218
>AT3G26920.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant
structures; EXPRESSED DURING: 4 anthesis, C globular
stage, petal differentiation and expansion stage, E
expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G13965.1); Has 1853 Blast hits to 1457 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2;
Fungi - 2; Plants - 1849; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink). | chr3:9921241-9922429 FORWARD
Length = 340
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 109 ISNAVKRKVQELDISLRLGKRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLY 168
I A R++++L + + G F P L+ SE+L TL+L + +P +C L++L
Sbjct: 16 IGIAFGRQLRKLVLKVYSGDWFKFPTSLYNSETLETLELYHCILIDVPFPVCLKSLRTLN 75
Query: 169 LSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTI---YYDPF 223
L F +++S+ L +GC L+ LVI+ V+ T+++P+L+ LT+ YY+ F
Sbjct: 76 LHEVEFVNDESVVNLLAGCISLENLVIHQTTDLNVKTFTIAVPSLQRLTVIVEYYEEF 133
>AT1G19410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT5G62970.1); Has
533 Blast hits to 521 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 533;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:6714492-6716439 REVERSE
Length = 435
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 63/237 (26%)
Query: 17 EEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEMSLQRS 76
+++L ILSFLP K V TS+LSKR + F +
Sbjct: 7 DDLLVKILSFLPTKVAVTTSILSKRGSF---------FGCGT----------------LP 41
Query: 77 VHQVLSCDNSDCIEKFRLRLRGSVIE-SDVCRWISNAVKRKVQEL--DISLRLGKRFPLP 133
+H+V +E L+ + D+ + AV V+EL D K LP
Sbjct: 42 LHRV------PVLESLPLKFSTLPFQPEDIKLCVEAAVSHCVRELFIDYYPHPYKFATLP 95
Query: 134 HILFTSESLITLKLEMRCALHIPR-----------------------------SICFPKL 164
++T +SL TL L + +PR ++CFP L
Sbjct: 96 FCVYTCKSLETLALSYAILMVVPRMACLPSLKNLLLQGVRYVDESFQLLDESHTVCFPSL 155
Query: 165 KSLYLSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
KSL+L + DE+ L L + CPVL+ELV+ ++T+ V + +P+L++L++ D
Sbjct: 156 KSLHLKEVISSDERYLRSLLANCPVLEELVMELDEYDTLGAVHIIVPSLKSLSLDID 212
>AT3G14710.1 | Symbols: | F-box family protein |
chr3:4941545-4943055 FORWARD
Length = 442
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 124/309 (40%), Gaps = 28/309 (9%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSD-DFKNNRSQG 68
D S L E V+ ILS LP + V TS+LSK WK W + FD D ++R
Sbjct: 26 DKFSSLLESVVSIILSQLPTAEAVSTSVLSKSWKNIWTNITDLHFDDTKQRDPSDSRFTD 85
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
V +V+ S I F L + E+ + W+S +KR +Q L ++ +
Sbjct: 86 F-------VERVVGDIGSPHISSFYLCSVNTFDETLLFSWLSKVLKRNLQRLVVTCNDLE 138
Query: 129 RFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHA-VFEDEKSLNLLFSGC 187
+ + SL+ L+L + L I P LK L L A +F L
Sbjct: 139 IISFSSLFPSFVSLVELRLRTKSILDISAPAILPNLKFLSLEDARIFNMSSVSKNLVLNF 198
Query: 188 PVLQEL-VIYCWYWETVENVTVSLPTLRTLTIY--YDPFCPKHLLGCAVNISARNL--IS 242
PVL+ YC + T + V + P LR ++ P C + + A L I+
Sbjct: 199 PVLETFEASYCRCFRT-DTVIIDSPLLRIFEMFKCTSEHVPNPSQVCKIRVLASKLEKIT 257
Query: 243 LHCTSCLTINFSFCDLFSLVDAYIDVP-SLWPSEGQKVALCAAKLLHGILRVKSLVLTE- 300
I+ SF SL DAY+ + S WP + C L +LVL++
Sbjct: 258 FCGDEPRKIHLSFPP--SLPDAYLALSRSEWPKTFLRSFTCVTSL--------ALVLSKD 307
Query: 301 -HATEVVKF 308
H V KF
Sbjct: 308 FHVMAVPKF 316
>AT1G60410.1 | Symbols: | F-box family protein |
chr1:22259129-22260526 FORWARD
Length = 406
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 1 MRQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
M + G D +S LP +L ILS L K+ VRTS+LS RW W D D D
Sbjct: 1 MARTEVSGKDRLSDLPCHLLCRILSNLSTKESVRTSVLSPRWSNLWSLVSVLDLDF--QD 58
Query: 61 FKNNRSQG----------MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRW-I 109
FK G E+ L+ + N E F RL V+ VC I
Sbjct: 59 FKGEHDMGEFIDSFMEYHEELGLKLKSFNMFYDANEHLHEPFVRRL-NKVVRRGVCDLNI 117
Query: 110 SNAVKRKVQELDISLRLGKRFPLPHILFTSESLITLKLEMRCALHIPR--SICFPKLKSL 167
N V ++D++L +P L++ +L+ L L H PR S+ P +K +
Sbjct: 118 QNMV-----DVDVAL-----VRMPPSLYSCATLVNLILYCVVFDH-PRSKSVSLPSVKKM 166
Query: 168 YLSHAVFEDEKSLNLLFSGCPVLQELVI 195
Y F+ + L L S PVL+EL +
Sbjct: 167 YFEGVKFDGDSVLETLISHSPVLEELTV 194
>AT3G54910.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT4G10400.2); Has 661 Blast hits to 647
proteins in 8 species: Archae - 0; Bacteria - 2; Metazoa
- 2; Fungi - 0; Plants - 657; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr3:20342967-20344277 REVERSE
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 89 IEKFRLRLRGS-VIESDVCRWISNAVKRKVQELDISLRLGKRFP--LPHILFTSESLITL 145
IE FRL L S ++ W+ AV ++EL++ P LP L+T +SL+ L
Sbjct: 35 IESFRLYLIDSKCTPENIKMWVVIAVSHCLRELEVIYSSYPEKPNILPSNLYTCKSLVIL 94
Query: 146 KLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVEN 205
+L L +PR P LK+L L + +E SL+ L S CPVL++L++ +++E
Sbjct: 95 ELCGEIRLDVPRMAFLPSLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLLLSDSMEK 154
Query: 206 VTVSLPTLRTLTIY 219
+TV +P+L+ L+++
Sbjct: 155 LTVVVPSLQILSLF 168
>AT3G54910.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT4G10400.2); Has 661 Blast hits to 647
proteins in 8 species: Archae - 0; Bacteria - 2; Metazoa
- 2; Fungi - 0; Plants - 657; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr3:20342967-20344277 REVERSE
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 89 IEKFRLRLRGS-VIESDVCRWISNAVKRKVQELDISLRLGKRFP--LPHILFTSESLITL 145
IE FRL L S ++ W+ AV ++EL++ P LP L+T +SL+ L
Sbjct: 35 IESFRLYLIDSKCTPENIKMWVVIAVSHCLRELEVIYSSYPEKPNILPSNLYTCKSLVIL 94
Query: 146 KLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVEN 205
+L L +PR P LK+L L + +E SL+ L S CPVL++L++ +++E
Sbjct: 95 ELCGEIRLDVPRMAFLPSLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLLLSDSMEK 154
Query: 206 VTVSLPTLRTLTIY 219
+TV +P+L+ L+++
Sbjct: 155 LTVVVPSLQILSLF 168
>AT3G54910.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT4G10400.2); Has 661 Blast hits to 647
proteins in 8 species: Archae - 0; Bacteria - 2; Metazoa
- 2; Fungi - 0; Plants - 657; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr3:20342967-20344277 REVERSE
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 89 IEKFRLRLRGS-VIESDVCRWISNAVKRKVQELDISLRLGKRFP--LPHILFTSESLITL 145
IE FRL L S ++ W+ AV ++EL++ P LP L+T +SL+ L
Sbjct: 35 IESFRLYLIDSKCTPENIKMWVVIAVSHCLRELEVIYSSYPEKPNILPSNLYTCKSLVIL 94
Query: 146 KLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVLQELVIYCWYWETVEN 205
+L L +PR P LK+L L + +E SL+ L S CPVL++L++ +++E
Sbjct: 95 ELCGEIRLDVPRMAFLPSLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLLLSDSMEK 154
Query: 206 VTVSLPTLRTLTIY 219
+TV +P+L+ L+++
Sbjct: 155 LTVVVPSLQILSLF 168
>AT1G57690.1 | Symbols: | F-box family protein |
chr1:21366721-21368150 REVERSE
Length = 330
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 2 RQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDF 61
R+ + +DIIS LP+ +L +IL K +RTS+LSKRW R++ DA
Sbjct: 18 RRKIKGEVDIISSLPDVILQHILFSFQTKYAIRTSVLSKRW--------RHEADA----- 64
Query: 62 KNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELD 121
+++ LS + + F L++ + + +W A+ R V+ +
Sbjct: 65 ---------------INKALSQYTAPKMMNFHLKINKNNSLHHIKKWTEFAMSRNVENMS 109
Query: 122 ISLRLGKRFPLPHILFTSESLITLKLEMRCALH--IPR-SICFPKLKSLYLSHAVFEDEK 178
+ +R + +P + S+ + L R LH IPR + + LK LS+ DE
Sbjct: 110 LDVRF-RSNKIPRFYEINSSVKS--LSHRLDLHDVIPRHGVSWTSLKKFSLSYCGLPDES 166
Query: 179 SLNLLFSGCPVLQ 191
+ + SGCP+L+
Sbjct: 167 A--KILSGCPILE 177
>AT5G38565.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: FBD (InterPro:IPR013596),
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT5G38570.1); Has
991 Blast hits to 931 proteins in 8 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 991;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:15444571-15446009 REVERSE
Length = 349
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDF 61
MDI + LP++VL ILSF+P K V TS+LSKRW++ W PR DF + D
Sbjct: 1 MDIFNGLPDDVLVKILSFVPTKVAVSTSILSKRWEFLWMWLPRLDFGSPKTDL 53
>AT1G78740.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G78750.1); Has 495 Blast hits to 486
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 495; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr1:29610494-29611438 REVERSE
Length = 287
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 75 RSVHQVLSCDNSDCIEKFRLRLRG---SVIESDVC-RWISNAVKRKVQELDI---SLRLG 127
R V + L + + IE F+L G S E D+ RWI ++ KV++LD S G
Sbjct: 7 RFVDRFLRFNRNYQIEYFKLSYPGDGSSEREVDLLKRWIDTVIQLKVKDLDFFDYSWEWG 66
Query: 128 -KRFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSG 186
F LP ++ ESL++LKL L +S+ P L+ L L F D L L SG
Sbjct: 67 FDNFQLPSTIYICESLVSLKLST-VTLPSVKSVSLPFLRVLKLGAVKFADHLDLETLISG 125
Query: 187 CPVLQELVIYCWYWETVENVTVSLPTLRTLT 217
C L+ L I +++ V+ + VS +L + T
Sbjct: 126 CTALETLAIR--FFDRVQVLQVSSQSLLSFT 154
>AT3G62430.1 | Symbols: | F-box family protein |
chr3:23093795-23095304 REVERSE
Length = 437
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 130/307 (42%), Gaps = 36/307 (11%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDF-----DAMSDDFKN 63
MD IS LP+ V++ ++S L K+ SK W P F A+S FK+
Sbjct: 1 MDRISNLPDGVIYRVISLLSTKEATCLKYTSKNWLNLVTIIPIAVFVDSSASAISASFKD 60
Query: 64 NRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIES--DVCRWISNAVKRKVQELD 121
+ M L S I +F L+L+ V + N ++ V +L+
Sbjct: 61 FADRIMLARLA-----------SHRIRRFSLKLQSLNFAQYKTVNDCLRNVLECGVLDLE 109
Query: 122 ISLRLGKRFPLPHILFTSESLITLKLEMRCALHI-PRSICFPKLKSLYLSHAVFEDEK-- 178
+ + + + LP +FT +S++ +KL + I P++ P LK+L L FE +
Sbjct: 110 LDINVRGDYSLPSEIFTCKSVVKMKLGSGFVIDILPKNAWLPALKTLLLDTVRFEFDNTA 169
Query: 179 --SLNLLFSGCPVLQELVIYC-----WYWETVENVTVSLPTLRTLTIYYDPFCPKHLLGC 231
S L S CPVL+ELVI W W VS L+ LTI +
Sbjct: 170 GCSFTKLISACPVLEELVIDGHNCEDWKWSR----RVSSQILKRLTIRRKEWVHDGSSFE 225
Query: 232 AVNISARNLISLHCTSCLTINFSFCDLFSLVDAYIDVPSLWPSEGQKVALCAAKLLHGIL 291
+++ +L L ++ L SLV+A +++PSL+ + V L+ G+
Sbjct: 226 PISLDIPSLEYFKYFDTLRDSYPVVKLNSLVEAKLELPSLYIGDTYNV----RNLIKGLK 281
Query: 292 RVKSLVL 298
V+ L L
Sbjct: 282 NVQILRL 288
>AT3G58820.1 | Symbols: | F-box family protein |
chr3:21752960-21754615 FORWARD
Length = 413
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAM----SDDFKNN 64
MD +S LP E+L +ILSFL K+ TS+LSKRW+ P D ++ K +
Sbjct: 1 MDGVSSLPNELLCHILSFLTTKEAALTSILSKRWRNLIAFVPNLYIDDTVFLHPEEGKRD 60
Query: 65 RSQGMEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISL 124
R + ++ S V ++L+ + I+K L+ V V WISN + R V +LD+ +
Sbjct: 61 RPEIIQ-SFMDFVDRILALQGNYPIKKCSLKCLTEVDSVRVDAWISNVLARGVTDLDLLI 119
Query: 125 RL----GKRFPLPHILFTSESLITLKLE 148
L + L S +L++LK++
Sbjct: 120 ILDCESDDNYRLSPKCLQSSTLVSLKID 147
>AT2G27505.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566);
BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT5G44950.1); Has 447 Blast hits to 361
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 447; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr2:11756746-11757829 FORWARD
Length = 282
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 47/196 (23%)
Query: 23 ILSFL--PMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGMEMSLQRSVHQV 80
ILS+L P D V+TS+LSKRW++ W D D ++L R +
Sbjct: 5 ILSYLKLPTGDSVKTSVLSKRWEFLWLMVSSLDLDV--------------INLSRDGGEA 50
Query: 81 LSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLR---LGKRFP------ 131
L+ + D ++ R V WI+ V VQ LD+ + + + P
Sbjct: 51 LARKHDDSMDDCNKR---------VMEWIAEVVHGGVQHLDVDAKTCGIIQSHPDIYKST 101
Query: 132 --------LPHILFTSESLITLKLEMRCALHIPR-SICFPKLKSLYLSHAVFEDEKSL-- 180
+P ++ S+++++LKL ++ P+ + P LK ++L + ++++ L
Sbjct: 102 MCSPSVDSMPKYVYVSKTVVSLKL-VKVGHEDPKFVVSLPSLKMMHLENILYKNHGVLLI 160
Query: 181 -NLLFSGCPVLQELVI 195
+L SG PVL+ L +
Sbjct: 161 IKMLLSGSPVLEVLTL 176
>AT3G58950.1 | Symbols: | F-box family protein |
chr3:21784116-21785840 REVERSE
Length = 417
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
MD+ S LP+EVL +ILSFL K+ S++SKRW+ ++ P D D ++ K R +
Sbjct: 1 MDLFSSLPDEVLCHILSFLTTKEAALASVVSKRWRNQFALVPNLDID---EEGKREREEI 57
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
+ +S V VL+ I+KF L+ + V + LD RLG
Sbjct: 58 L-LSFMDFVDNVLALQADSPIKKFSLKCKTGV---------------HPRRLDAWARLGP 101
Query: 129 RFPLPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCP 188
P+ L + I RC FP L+ L +S + D + +
Sbjct: 102 VLPMLKTLIIDSAWI------RCDTIETFLPTFPVLEELSMSINEWPDWDE-TVTSASLR 154
Query: 189 VLQELVIYCWYWETVENVTVSLPTLRTLTIYYD 221
L I C + ++++ +P+L YYD
Sbjct: 155 KLSIFTIGCENFSNPKSISFDIPSLVYFE-YYD 186
>AT2G29930.2 | Symbols: | F-box family protein |
chr2:12756457-12757727 REVERSE
Length = 339
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 136 LFTSESLITLKL------EMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPV 189
FTS +L+ L + E R P + FP LKSL L F D SGCPV
Sbjct: 8 FFTSNTLLELTICGGFYAEGRLP---PGRVFFPALKSLSLVSVEFTDTLMYQNFISGCPV 64
Query: 190 LQELVIY------CWYWETVENVTVSLPTLRTLTIYYDPFCPKH-LLGCAVNISARNLIS 242
L+EL ++ C W+ + VS P+++ L IY +P ++ C I + L+
Sbjct: 65 LEELFLHYDNETQCPAWKGL----VSSPSIKRLNIYDNPSELRYEAYKCCFQIPS--LVY 118
Query: 243 LHCTSCLTINFSFCDLFSLVDAYIDV--PSLWPSEGQKVALCAAKLLHGILRVKSLVLTE 300
L +S + ++ DL SL +A +++ P + + + LL GI VK+L L+
Sbjct: 119 LDYSSYVAKQYAV-DLVSLEEARLNIRYPERLVDQNEDIFGDVTDLLKGISNVKTLHLSS 177
Query: 301 HATEV 305
+ EV
Sbjct: 178 DSLEV 182
>AT3G23955.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), Cyclin-like F-box
(InterPro:IPR001810), FBD-like (InterPro:IPR006566);
BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT5G25850.1). | chr3:8655266-8657399
REVERSE
Length = 401
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 15 LPEEVLHYILSFLPMKDIVRTSLLSKRWK--YKWKSNPRYDFDAMSDDFKNNRSQGMEMS 72
LP+ +L IL+ LP ++ V+TS+LS RW+ + W N F S F S G
Sbjct: 62 LPDPLLTQILNHLPTEEAVKTSVLSTRWRTLWLWVHNLELSFSKFS-SFNAFLSFG---- 116
Query: 73 LQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCRWISNAVKRKVQELDISLRLGKRFPL 132
+ D CIE +L L G+ S + WI VKRK+Q L + L G PL
Sbjct: 117 -----NWFFDSDRVSCIESLKLSLDGND-ASYLKPWIDAFVKRKIQRLHVRLTQGCEMPL 170
>AT2G39415.1 | Symbols: | F-box family protein |
chr2:16458607-16458966 REVERSE
Length = 119
Score = 52.0 bits (123), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 1 MRQHVTDGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDD 60
+ + ++ +D IS LP+ +L ILS LP +RTS+LS RW++ W P FD
Sbjct: 29 LARDASENIDSISSLPDVILQQILSSLPTNLAIRTSVLSTRWRHVWSDTPYIYFDGPGTL 88
Query: 61 FKNNRSQGMEMSLQR 75
++ ++ + +L R
Sbjct: 89 YRGLKADTINKTLAR 103
>AT5G44940.1 | Symbols: | F-box family protein |
chr5:18149369-18150892 FORWARD
Length = 377
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 7 DGMDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNP-----RYDFDAMSDDF 61
+ D IS P+ +L IL LP KD V+TS+LSKRW+ W + P +DF +
Sbjct: 2 EEFDYISEFPDCLLTQILLNLPTKDSVKTSVLSKRWRNLWLNVPGLRLRTFDFPVFPYPY 61
Query: 62 KNNRSQGMEMSLQRSVHQVLSCDNSDCIEKFRLR-LRGSVIESDVCRWISNAVKRKVQEL 120
+ + M+ ++ C + ++KF + + + I V R +Q L
Sbjct: 62 EEGFVRFMDRFME------FKCRSR--LQKFMITYFEHNGYRDRLMELIGTLVDRGIQHL 113
Query: 121 DISLRLGKRFP-LPHILFTSESLITLKLEMRCALHIPR-SICFPKLKSLYLSHAVFEDEK 178
+ + R + ++ S++L++LKL L P + P LK L L + ++
Sbjct: 114 YVYMHTCNRVDFIRQNIYKSKTLVSLKL-YNVELKNPEFVVSLPCLKILKLENIFHGEDG 172
Query: 179 SLNL--LFSGCPVLQELVIYCWYWETVENVTVSLP 211
L + L SGCPVL++L + + + V +++ P
Sbjct: 173 PLVVEKLISGCPVLEDLELIRPFDDNVGYGSLTAP 207
>AT5G44960.1 | Symbols: | F-box family protein |
chr5:18153852-18155391 FORWARD
Length = 416
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Query: 10 DIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQGM 69
D I+ LP+ +L IL L KD V+TS+ SKRW+ W + P D S F N
Sbjct: 5 DYINELPDSLLTQILLDLRTKDSVKTSVSSKRWRNLWLNVP--GLDLFSLQFTNPHH--- 59
Query: 70 EMSLQRSVHQVLSCDNSDCIEKFRLR-LRGSVIESDVCRWISNAVKRKVQELDISLRLGK 128
E L + + + + + ++KF +R + I V +Q L + +
Sbjct: 60 EEGLIKFMDRFMESNCRSRLQKFMIRYFECNGYRDRFMELIGTVVDCGIQHLYVYMHTCN 119
Query: 129 RFP-LPHILFTSESLITLKLEMRCALHIPR-SICFPKLKSLYLSHAVFEDEKSLNL--LF 184
R + ++ S++L++LKL L P + P LK L L + ++ L + L
Sbjct: 120 RVDFIRQNIYKSKTLVSLKL-YNVELKNPDFVVSLPCLKILKLMKICYGEDGPLVVEKLI 178
Query: 185 SGCPVLQELVIYCWYWETVENVTVSL----PTLRTLTIYYDPF 223
SGCPVL++L + + ++V + L P L+ +T Y F
Sbjct: 179 SGCPVLEDLELIKPFDILTQDVILFLRIDAPRLKYMTFYESRF 221
>AT5G40050.1 | Symbols: | F-box family protein |
chr5:16032083-16033551 REVERSE
Length = 415
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 25/180 (13%)
Query: 15 LPEEVLHYILSFLPMKDIVRTSLLSKRWKYKW-------KSNPRYDFDAMSDDFKNNRSQ 67
LP+E+L +ILSFLP K TS+LSKRW+ + S D D + + +
Sbjct: 19 LPDELLSHILSFLPTKRAASTSILSKRWRTLFPLMNHLCASLYLDDTDLLYPERQTEEEY 78
Query: 68 G-MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESDVCR------WISNAVKRKVQEL 120
+ S + V + LS N++ ++KF L + DV R +S A+++ V +L
Sbjct: 79 YVIHNSFRNFVDKTLSGCNNNSLKKFSLTYE----DDDVQRMCLTTGMMSKALEQGVSDL 134
Query: 121 DISLRLGKRFP----LPHILFTSESLITLKLEMRCALHIPRSICFPKLKSLYLSHAVFED 176
++ + + + LP +F + +L+ KL + L + RS + L+ LY+ H ED
Sbjct: 135 ELYIYMPLMYEPPRLLPDTVFINNTLV--KLTLGTELCLGRS-PWENLEELYIHHIYIED 191
>AT5G11370.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT5G56410.1); Has 303 Blast hits to 290
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 303; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr5:3627849-3629717 FORWARD
Length = 311
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 144 TLKLEMRCALHIPRSICFPKLKSLYLSHAVFEDEKSLNLLFSGCPVLQELVI 195
+LKL+ + +PR +C P LK+L+L ++ DE SL L S C +L+ELV+
Sbjct: 67 SLKLKDEIFVDVPRMVCLPSLKTLHLKGVMYVDEGSLQRLLSNCSLLEELVV 118
>AT3G60790.1 | Symbols: | F-box protein-related |
chr3:22464623-22466948 FORWARD
Length = 488
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 81/195 (41%), Gaps = 32/195 (16%)
Query: 9 MDIISVLPEEVLHYILSFLPMKDIVRTSLLSKRWKYKWKSNPRYDFDAMSDDFKNNRSQG 68
+D IS+LP+E+L ILS L KD V TS LSKRW +WK P D + N S
Sbjct: 49 VDRISMLPDEMLQKILSTLSTKDAVITSTLSKRWVDQWKRIPHLCVDMRNIMRTNPTSYV 108
Query: 69 MEMSLQRSVHQVLSCDNSDCIEKFRLRLRGSVIESD------VCRWISNAVKRKVQELDI 122
E+S + + + +N R L I + RWI V R+ Q +I
Sbjct: 109 HELSFRFAESMTKTLNNH------RGHLESCTISHIQFIFLFIDRWI-QTVTREKQTKEI 161
Query: 123 SLRLGKRFPLPHILFTSESLITLKLEMRCALHI-PRSICFPKLKSLYLSHAVFEDEKSLN 181
+L P + + S LH+ P + C P L SL L+ K L
Sbjct: 162 TLVNNIGCMTPFVRYNS-------------LHLSPSAFCHPSLTSLSLTRY-----KLLE 203
Query: 182 LLFSGCPVLQELVIY 196
F C L+ L +Y
Sbjct: 204 KAFKNCCNLKILKLY 218